Delta: A Toolset for the Structural Analysis of Biological Sequences on a 3D Triangular Lattice Export

@incollection{delta, abstract = {The lattice approach to biological structural analysis was made popular by the HP model for protein folding, but had not been used previously for RNA secondary structure prediction. We introduce the Delta toolset for the structural analysis of biological sequences on a 3D triangular lattice. The Delta toolset includes a proof-of-concept RNA folding program that is both fast and accurate in predicting the secondary structures with pseudoknots of short RNA sequences.}, author = {Jiang, Minghui and Mayne, Martin and Gillespie, Joel}, citeulike-article-id = {2599767}, citeulike-linkout-0 = {http://dx.doi.org/10.1007/978-3-540-72031-7_47}, doi = {10.1007/978-3-540-72031-7_47}, journal = {Bioinformatics Research and Applications}, keywords = {3d-lattice, delta, folding, rna}, pages = {518--529}, posted-at = {2008-03-26 21:07:47}, priority = {2}, title = {Delta: A Toolset for the Structural Analysis of Biological Sequences on a 3D Triangular Lattice}, url = {http://dx.doi.org/10.1007/978-3-540-72031-7_47}, year = {2007} }

TY - CHAP ID - delta L3 - citeulike-article-id:2599767 N2 - The lattice approach to biological structural analysis was made popular by the HP model for protein folding, but had not been used previously for RNA secondary structure prediction. We introduce the Delta toolset for the structural analysis of biological sequences on a 3D triangular lattice. The Delta toolset includes a proof-of-concept RNA folding program that is both fast and accurate in predicting the secondary structures with pseudoknots of short RNA sequences. JF - Bioinformatics Research and Applications EP - 529 TI - Delta: A Toolset for the Structural Analysis of Biological Sequences on a 3D Triangular Lattice SP - 518 KW - 3d-lattice KW - delta KW - folding KW - rna AU - Jiang, Minghui AU - Mayne, Martin AU - Gillespie, Joel PY - 2007/// UR - http://dx.doi.org/10.1007/978-3-540-72031-7_47 ER -