haarcuba's library 61 articles Export

	Design, implementation and evaluation of a practical pseudoknot folding algorithm based on thermodynamics. [My Copy] BMC bioinformatics, Vol. 5 (4 August 2004) by Jens Reeder, Robert Giegerich posted to no-tag by haarcuba on 2009-11-25 00:20:51 as along with 8 people and 3 groups rb_india gzm55 guxiyou marcius eckart_bindewald arcticrasta condon Hosna beta BioinfoCIPF SGU-CIPF
	ILM: a web server for predicting RNA secondary structures with pseudoknots [My Copy] Nucl. Acids Res., Vol. 32, No. suppl_2. (1 July 2004), pp. W146-149. by Jianhua Ruan, Gary D. Stormo, Weixiong Zhang posted to no-tag by haarcuba on 2009-11-25 00:16:31 as along with 2 people austin balajis
	Kinefold web server for RNA/DNA folding path and structure prediction including pseudoknots and knots [My Copy] Nucl. Acids Res., Vol. 33, No. suppl_2. (1 July 2005), pp. W605-610. by A. Xayaphoummine, T. Bucher, H. Isambert posted to no-tag by haarcuba on 2009-11-25 00:13:35 as along with 4 people oteri ellarond austin Kiarostami
	HotKnots: Heuristic prediction of RNA secondary structures including pseudoknots [My Copy] RNA, Vol. 11, No. 10. (October 2005), pp. 1494-1504. by Jihong Ren, Baharak Rastegari, A. N. N. E. Condon, Holger H. Hoos posted to no-tag by haarcuba on 2009-11-25 00:10:55 as along with 9 people and 3 groups rb_india gzm55 marcius eckart_bindewald arcticrasta condon Hosna jarasch guxiyou beta BioinfoCIPF SGU-CIPF
	A New Pseudoknots Folding Algorithm for RNA Structure Prediction [My Copy] Computing and Combinatorics (2005), pp. 94-103. by Hengwu Li, Daming Zhu posted to no-tag by haarcuba on 2009-11-25 00:05:50 as
	Is abundant A-to-I RNA editing primate-specific? [My Copy] Trends in Genetics, Vol. 21, No. 2. (February 2005), pp. 77-81. by Eli Eisenberg, Sergey Nemzer, Yaron Kinar, Rotem Sorek, Gideon Rechavi, Erez Y. Levanon posted to no-tag by haarcuba on 2009-11-01 12:27:48 as along with 1 person bpcusack
	Seven novel mutations of the <I>ADAR</I> gene in Chinese families and sporadic patients with dyschromatosis symmetrica hereditaria (DSH) [My Copy] Human Mutation, Vol. 23, No. 6. (2004), pp. 629-630. by Xue-Jun Zhang, Ping-Ping He, Ming Li, et al.Chun-Di He, Kai-Lin Yan, Yong Cui, Sen Yang, Kai-Yue Zhang, Min Gao, Jian-Jun Chen, Cheng-Rang Li, Lin Jin, Hong-Duo Chen, Shi-Jie Xu, Wei Huang posted to no-tag by haarcuba on 2009-10-11 16:34:20 as
	Mutations of the RNA-specific adenosine deaminase gene (DSRAD) are involved in dyschromatosis symmetrica hereditaria. [My Copy] American journal of human genetics, Vol. 73, No. 3. (September 2003), pp. 693-699. by Yoshinori Miyamura, Tamio Suzuki, Michihiro Kono, et al.Katsuhiko Inagaki, Shiro Ito, Noriyuki Suzuki, Yasushi Tomita posted to no-tag by haarcuba on 2009-10-11 16:29:20 as
	RNA hyperediting and alternative splicing of hematopoietic cell phosphatase (PTPN6) gene in acute myeloid leukemia [My Copy] Hum. Mol. Genet., Vol. 9, No. 15. (1 September 2000), pp. 2297-2304. by Alessandro Beghini, Carla B. Ripamonti, Paolo Peterlongo, et al.Gaia Roversi, Roberto Cairoli, Enrica Morra, Lidia Larizza posted to no-tag by haarcuba on 2009-10-09 14:21:54 as
	RNA editing in human cancer: review [My Copy] APMIS, Vol. 117, No. 8. (2009), pp. 551-557. by A. Jozef 0160kard, O. Ninette Amarigli, I. Gideon Rechav posted to no-tag by haarcuba on 2009-10-09 13:54:00 as
	Production of aberrant promoter transcripts contributes to methylation and silencing of unlinked homologous promoters in trans [My Copy] The EMBO Journal, Vol. 18, No. 1. (04 January 1999), pp. 241-248. by M. F. Mette, J. van der Winden, M. A. Matzke, A. J. M. Matzke posted to no-tag by haarcuba on 2009-09-29 12:24:44 as
	RNA-based silencing strategies in plants [My Copy] Current Opinion in Genetics & Development, Vol. 11, No. 2. (1 April 2001), pp. 221-227. by M. Matzke posted to no-tag by haarcuba on 2009-09-29 12:14:24 as
	RNA-directed DNA methylation [My Copy] Plant Molecular Biology, Vol. 43, No. 2. (1 June 2000), pp. 203-220. by Michael Wassenegger posted to intro by haarcuba on 2009-09-29 11:56:07 as
	Endogenous and Silencing-Associated Small RNAs in Plants [My Copy] Plant Cell, Vol. 14, No. 7. (1 July 2002), pp. 1605-1619. by Cesar Llave, Kristin D. Kasschau, Maggie A. Rector, James C. Carrington posted to intro by haarcuba on 2009-09-29 11:04:11 as along with 2 people kmachemer natstreet
	An expressed pseudogene regulates the messenger-RNA stability of its homologous coding gene [My Copy] Nature, Vol. 423, No. 6935. (01 May 2003), pp. 91-96. by Shinji Hirotsune, Noriyuki Yoshida, Amy Chen, et al.Lisa Garrett, Fumihiro Sugiyama, Satoru Takahashi, Ken-ichi Yagami, Anthony Wynshaw-Boris, Atsushi Yoshiki posted to intro by haarcuba on 2009-09-23 16:44:32 as along with 3 people and 1 group imouthesmp wrowell xingxu Cline_lab
	Mutations in the RNA Component of RNase MRP Cause a Pleiotropic Human Disease, Cartilage-Hair Hypoplasia [My Copy] Cell, Vol. 104, No. 2. (January 2001), pp. 195-203. by M. Ridanpaa posted to intro by haarcuba on 2009-09-23 16:31:18 as
	Molecular evolutionary evidence that H19 mRNA is functional [My Copy] Trends in Genetics, Vol. 15, No. 4. (1 April 1999), pp. 134-135. by L. Hurst posted to intro by haarcuba on 2009-09-23 16:07:07 as
	Expression of alternatively spliced FGF-2 antisense RNA transcripts in the central nervous system: regulation of FGF-2 mRNA translation [My Copy] Molecular and Cellular Endocrinology, Vol. 162, No. 1-2. (25 April 2000), pp. 69-78. by A. Li posted to intro by haarcuba on 2009-09-23 14:36:59 as
	A noncoding RNA regulates human protease-activated receptor-1 gene during embryogenesis [My Copy] Biochimica et Biophysica Acta (BBA) - Gene Structure and Expression, Vol. 1576, No. 3. (19 July 2002), pp. 237-245. by N. Madamanchi posted to intro by haarcuba on 2009-09-23 14:29:12 as
	Tsix, a gene antisense to Xist at the X-inactivation centre [My Copy] Nature Genetics, Vol. 21, No. 4. (01 April 1999), pp. 400-404. by Jeannie Lee, Lance S. Davidow, David Warshawsky posted to intro by haarcuba on 2009-09-23 14:16:58 as along with 1 person coela
	TTY2: a multicopy Y-linked gene family. [My Copy] Genome research, Vol. 11, No. 6. (June 2001), pp. 935-945. by E. Makrinou, M. Fox, M. Lovett, et al.K. Haworth, J. M. Cameron, K. Taylor, Y. H. Edwards posted to intro by haarcuba on 2009-09-23 14:01:29 as
	The HumanNTTGene: Identification of a Novel 17-kb Noncoding Nuclear RNA Expressed in Activated CD4+T Cells [My Copy] Genomics, Vol. 39, No. 2. (15 January 1997), pp. 171-184. by A. Y. Liu, B. S. Torchia, B. R. Migeon, R. F. Siliciano posted to intro by haarcuba on 2009-09-23 13:42:24 as
	Identification and characterization of human BIC, a gene on chromosome 21 that encodes a noncoding RNA [My Copy] Gene, Vol. 274, No. 1-2. (22 August 2001), pp. 157-167. by W. Tam posted to intro by haarcuba on 2009-09-23 13:06:04 as
	Ntab, a novel non-coding RNA abundantly expressed in rat brain [My Copy] Neuroscience, Vol. 108, No. 2. (10 December 2001), pp. 207-215. by P. French posted to intro by haarcuba on 2009-09-23 12:36:55 as
	A novel type of non-coding RNA expressed in the rat brain [My Copy] Molecular Brain Research, Vol. 66, No. 1-2. (20 March 1999), pp. 1-13. by Y. Komine posted to intro by haarcuba on 2009-09-23 12:22:35 as
	Neuronal BC1 RNA: Co-expression with growth-associated protein-43 messenger RNA [My Copy] Neuroscience, Vol. 103, No. 2. (14 March 2001), pp. 465-479. by Y. Lin posted to intro by haarcuba on 2009-09-23 11:58:03 as
	A novel synapse-associated noncoding RNA. [My Copy] Molecular and cellular biology, Vol. 14, No. 11. (November 1994), pp. 7095-7104. by M. A. Velleca, M. C. Wallace, J. P. Merlie posted to no-tag by haarcuba on 2009-09-22 17:15:54 as
	Requirement for a Noncoding RNA in Drosophila Polar Granules for Germ Cell Establishment [My Copy] Science, Vol. 274, No. 5295. (20 December 1996), pp. 2075-2079. by Akira Nakamura, Reiko Amikura, Masanori Mukai, Satoru Kobayashi, Paul F. Lasko posted to no-tag by haarcuba on 2009-09-22 16:54:54 as
	Spatially ordered transcription of regulatory DNA in the bithorax complex of Drosophila [My Copy] Development, Vol. 107, No. 2. (1 October 1989), pp. 321-329. by E. Sanchez-Herrero, M. Akam posted to intro by haarcuba on 2009-09-22 16:40:38 as
	Novel transcripts from the Ultrabithorax domain of the bithorax complex. [My Copy] Genes & Development, Vol. 1, No. 3. (May 1987), pp. 307-322. by H. D. Lipshitz, D. A. Peattie, D. S. Hogness posted to intro by haarcuba on 2009-09-22 16:32:12 as along with 1 person galka8_diploma
	Identification of Tissue-Specific MicroRNAs from Mouse [My Copy] Current Biology, Vol. 12, No. 9. (30 April 2002), pp. 735-739. by Mariana Lagos-Quintana, Reinhard Rauhut, Abdullah Yalcin, Jutta Meyer, Winfried Lendeckel, Thomas Tuschl posted to no-tag by haarcuba on 2009-09-22 15:30:37 as
	An Abundant Class of Tiny RNAs with Probable Regulatory Roles in Caenorhabditis elegans [My Copy] Science, Vol. 294, No. 5543. (26 October 2001), pp. 858-862. by Nelson C. Lau, Lee P. Lim, Earl G. Weinstein, David P. Bartel posted to no-tag by haarcuba on 2009-09-22 15:20:10 as along with 8 people and 2 groups thegoose2 gzm55 SaraNasser tharris tardigrade mtagaya heliopais elfar C. elegans / WormBase microRNA
	Challenging the dogma: the hidden layer of non-protein-coding RNAs in complex organisms [My Copy] BioEssays, Vol. 25, No. 10. (October 2003), pp. 930-939. by John S. Mattick posted to intro by haarcuba on 2009-09-22 15:09:32 as along with 1 person imouthesmp
	The relationship between non-protein-coding DNA and eukaryotic complexity [My Copy] BioEssays, Vol. 29, No. 3. (2007), pp. 288-299. by Ryan J. Taft, Michael Pheasant, John S. Mattick posted to intro by haarcuba on 2009-09-22 13:05:58 as along with 5 people and 2 groups aprasad alexg dchughes cas heliopais G4ID Genetics-of-Gambling
	Examples of the complex architecture of the human transcriptome revealed by RACE and high-density tiling arrays [My Copy] Genome Research, Vol. 15, No. 7. (1 July 2005), pp. 987-997. by Philipp Kapranov, Jorg Drenkow, Jill Cheng, et al.Jeffrey Long, Gregg Helt, Sujit Dike, Thomas R. Gingeras posted to no-tag by haarcuba on 2009-09-22 12:14:42 as along with 4 people xingxu myrtilus hagechouchin443 olympos
	Transcriptional maps of 10 human chromosomes at 5-nucleotide resolution. [My Copy] Science (New York, N.Y.), Vol. 308, No. 5725. (20 May 2005), pp. 1149-1154. by Jill Cheng, Philipp Kapranov, Jorg Drenkow, et al.Sujit Dike, Shane Brubaker, Sandeep Patel, Jeffrey Long, David Stern, Hari Tammana, Gregg Helt, Victor Sementchenko, Antonio Piccolboni, Stefan Bekiranov, Dione K. Bailey, Madhavan Ganesh, Srinka Ghosh, Ian Bell, Daniela S. Gerhard, Thomas R. Gingeras posted to intro by haarcuba on 2009-09-22 11:49:14 as along with 10 people bartjacobse xingxu hagechouchin443 inesdesantiago GeeSharpMinor karbak tmmurali tuck bertelsen jasonflannick
	Unbiased Mapping of Transcription Factor Binding Sites along Human Chromosomes 21 and 22 Points to Widespread Regulation of Noncoding RNAs [My Copy] Cell, Vol. 116, No. 4. (20 February 2004), pp. 499-509. by Simon Cawley, Stefan Bekiranov, Huck H. Ng, et al.Philipp Kapranov, Edward A. Sekinger, Dione Kampa, Antonio Piccolboni, Victor Sementchenko, Jill Cheng, Alan J. Williams posted to intro by haarcuba on 2009-09-22 10:58:31 as along with 2 people suizifish johncumbers
	Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs [My Copy] Nature, Vol. 420, No. 6915. (05 December 2002), pp. 563-573. posted to intro by haarcuba on 2009-09-22 10:52:26 as along with 6 people and 1 group YukaH myrtilus Cortel jfr eckart_bindewald kaspermunch Bioinformatics
	Large-Scale Transcriptional Activity in Chromosomes 21 and 22 [My Copy] Science, Vol. 296, No. 5569. (3 May 2002), pp. 916-919. by Philipp Kapranov, Simon E. Cawley, Jorg Drenkow, et al.Stefan Bekiranov, Robert L. Strausberg, Stephen P. A. Fodor, Thomas R. Gingeras posted to intro by haarcuba on 2009-09-22 10:46:36 as along with 6 people inesdesantiago coela GeeSharpMinor evaf bertelsen reyez
	Genomics: The amazing complexity of the human transcriptome [My Copy] European Journal of Human Genetics, Vol. 13, No. 8. (22 June 2005), pp. 894-897. by Martin C. Frith, Michael Pheasant, John S. Mattick posted to intro by haarcuba on 2009-09-22 10:33:43 as along with 2 people cassj alexg
	Widespread cleavage of A-to-I hyperediting substrates [My Copy] RNA, Vol. 15, No. 9. (September 2009), pp. 1632-1639. by Sivan Osenberg, Dan Dominissini, Gideon Rechavi, Eli Eisenberg posted to no-tag by haarcuba on 2009-08-25 12:43:29 as
	Regulation of serotonin-2C receptor G-protein coupling by RNA editing [My Copy] Nature, Vol. 387, No. 6630. (15 May 1997), pp. 303-308. by Colleen M. Burns, Hsin Chu, Susan M. Rueter, et al.Linda K. Hutchinson, Herve Canton, Elaine Sanders-Bush, Ronald B. Emeson posted to no-tag by haarcuba on 2009-08-24 11:31:17 as
	Purification and characterization of a human RNA adenosine deaminase for glutamate receptor B pre-mRNA editing. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 94, No. 9. (29 April 1997), pp. 4354-4359. by J. H. Yang, P. Sklar, R. Axel, T. Maniatis posted to no-tag by haarcuba on 2009-08-24 11:29:52 as
	RED2, a Brain-specific Member of the RNA-specific Adenosine Deaminase Family [My Copy] J. Biol. Chem., Vol. 271, No. 50. (13 December 1996), pp. 31795-31798. by Thorsten Melcher, Stefan Maas, Anne Herb, Rolf Sprengel, Miyoko Higuchi, Peter H. Seeburg posted to no-tag by haarcuba on 2009-08-09 12:48:22 as
	Regulating Gene Expression through RNA Nuclear Retention [My Copy] Cell, Vol. 123, No. 2. (21 October 2005), pp. 249-263. by Kannanganattu V. Prasanth, Supriya G. Prasanth, Zhenyu Xuan, et al.Stephen Hearn, Susan M. Freier, C. Frank Bennett, Michael Q. Zhang, David L. Spector posted to no-tag by haarcuba on 2009-08-06 14:43:40 as along with 4 people operon rklancer bertelsen Jporci
	Cleavage of dsRNAs hyper-edited by ADARs occurs at preferred editing sites. [My Copy] Nucleic acids research, Vol. 33, No. 18. (2005), pp. 5954-5964. by A. D. Scadden, M. A. O'Connell posted to no-tag by haarcuba on 2009-08-06 14:37:08 as
	Identification and characterization of RNA editing events within the 5-HT2C receptor. [My Copy] Annals of the New York Academy of Sciences, Vol. 861 (15 December 1998), pp. 38-48. by C. M. Niswender, E. Sanders-Bush, R. B. Emeson posted to no-tag by haarcuba on 2009-08-06 13:48:45 as
	Structural Requirements for RNA Editing in Glutamate Receptor Pre-mRNAs by Recombinant Double-stranded RNA Adenosine Deaminase [My Copy] J. Biol. Chem., Vol. 271, No. 21. (24 May 1996), pp. 12221-12226. by Stefan Maas, Thorsten Melcher, Anne Herb, et al.Peter H. Seeburg, Walter Keller, Sabine Krause, Miyoko Higuchi, Mary A. O'Connell posted to no-tag by haarcuba on 2009-08-06 12:43:45 as
	A phylogenetic analysis reveals an unusual sequence conservation within introns involved in RNA editing. [My Copy] RNA (New York, N.Y.), Vol. 6, No. 2. (February 2000), pp. 257-269. by P. J. Aruscavage, B. L. Bass posted to no-tag by haarcuba on 2009-08-06 10:59:55 as
	The RISC subunit Tudor-SN binds to hyper-edited double-stranded RNA and promotes its cleavage. [My Copy] Nature structural & molecular biology, Vol. 12, No. 6. (15 June 2005), pp. 489-496. by A. D. Scadden posted to no-tag by haarcuba on 2009-08-05 14:23:33 as