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	Selective oxidation and reduction of methionine residues in peptides and proteins by oxygen exchange between sulfoxide and sulfide [My Copy] J. Biol. Chem., Vol. 261, No. 1. (5 January 1986), pp. 66-70. by Y. Shechter posted to met-oxidation by hc5428 on 2009-02-03 15:51:21 as
	Protein-Protein Interactions in the Membrane: Sequence, Structural, and Biological Motifs [My Copy] Structure, Vol. 16, No. 7. (9 July 2008), pp. 991-1001. by David T. Moore, Bryan W. Berger, William F. Degrado posted to asparagine gasmotif hydrogenbond-in-membrane oligomerizingpolarresidues by hc5428 on 2009-02-03 15:39:23 as along with 2 people neils zwang
	Modest membrane hydrogen bonds deliver rich results [My Copy] Nat Chem Biol, Vol. 4, No. 7. (July 2008), pp. 393-394. by Gevorg Grigoryan, William F. Degrado posted to hydrogenbond-in-membrane by hc5428 on 2009-02-03 15:36:24 as
	A monomeric membrane peptide that lives in three worlds: in solution, attached to, and inserted across lipid bilayers. [My Copy] Biophysical journal, Vol. 93, No. 7. (1 October 2007), pp. 2363-2372. by Y. K. Reshetnyak, M. Segala, O. A. Andreev, D. M. Engelman posted to antimicrobialpeptide membrane-insertion-energetics by hc5428 on 2009-01-09 16:56:48 as
	Rational design of 'water-soluble' bacteriorhodopsin variants. [My Copy] Protein Eng, Vol. 15, No. 6. (June 2002), pp. 485-492. by K. Mitra, T. A. Steitz, D. M. Engelman posted to mutagenesis water-soluble-membraneprotein by hc5428 on 2009-01-09 16:53:20 as along with 1 person jwm
	Membrane protein folding: beyond the two stage model. [My Copy] FEBS Lett, Vol. 555, No. 1. (27 November 2003), pp. 122-125. by D. M. Engelman, Y. Chen, C. N. Chin, et al.A. R. Curran, A. M. Dixon, A. D. Dupuy, A. S. Lee, U. Lehnert, E. E. Matthews, Y. K. Reshetnyak, A. Senes, J. L. Popot posted to two-stage-model by hc5428 on 2009-01-09 16:50:49 as along with 1 person thaliana
	Solution structure of methionine-oxidized amyloid beta-peptide (1-40). Does oxidation affect conformational switching? [My Copy] Biochemistry, Vol. 37, No. 37. (15 September 1998), pp. 12700-12706. by A. A. Watson, D. P. Fairlie, D. J. Craik posted to met-oxidation by hc5428 on 2009-01-09 16:49:36 as along with 1 person andreasauerwein
	Detergents modulate dimerization, but not helicity, of the glycophorin A transmembrane domain. [My Copy] Journal of molecular biology, Vol. 293, No. 3. (29 October 1999), pp. 639-651. by L. E. Fisher, D. M. Engelman, J. N. Sturgis posted to detergents gpa by hc5428 on 2009-01-09 16:32:24 as
	Effect of detergents on the association of the glycophorin a transmembrane helix. [My Copy] Biophysical journal, Vol. 85, No. 5. (November 2003), pp. 3097-3105. by L. E. Fisher, D. M. Engelman, J. N. Sturgis posted to detergents gpa by hc5428 on 2009-01-09 16:29:41 as
	The Calpha ---H...O hydrogen bond: a determinant of stability and specificity in transmembrane helix interactions. [My Copy] Proc Natl Acad Sci U S A, Vol. 98, No. 16. (31 July 2001), pp. 9056-9061. by A. Senes, I. Ubarretxena-Belandia, D. M. Engelman posted to backbone-hydrogen-bond c-alpha-h--o-hydrogenbond gasmotif by hc5428 on 2009-01-09 16:25:43 as along with 3 people and 1 group Copper_Calcio thaliana xdeupi LabCompMed
	Synergistic interactions between aqueous and membrane domains of a designed protein determine its fold and stability. [My Copy] Journal of molecular biology, Vol. 348, No. 5. (20 May 2005), pp. 1225-1233. by L. Cristian, V. Nanda, J. D. Lear, W. F. DeGrado posted to asparagine ms1 oligomerizingpolarresidues water-soluble-membraneprotein by hc5428 on 2008-12-12 11:29:45 as
	Structure-based design of peptides that self-assemble into regular polyhedral nanoparticles. [My Copy] Nanomedicine : nanotechnology, biology, and medicine, Vol. 2, No. 2. (June 2006), pp. 95-102. by S. Raman, G. Machaidze, A. Lustig, U. Aebi, P. Burkhard posted to linking-different-oligomerization-domains by hc5428 on 2008-12-12 11:25:56 as
	Motifs of serine and threonine can drive association of transmembrane helices. [My Copy] Journal of molecular biology, Vol. 316, No. 3. (22 February 2002), pp. 799-805. by J. P. Dawson, J. S. Weinger, D. M. Engelman posted to gasmotif packingmotifs by hc5428 on 2008-12-12 11:23:44 as
	A helix propensity scale based on experimental studies of peptides and proteins. [My Copy] Biophysical journal, Vol. 75, No. 1. (July 1998), pp. 422-427. by C. N. Pace, J. M. Scholtz posted to aa-helicalpropensity-scale by hc5428 on 2008-11-28 14:57:08 as along with 1 person yarikson
	A measure of helical propensity for amino acids in membrane environments. [My Copy] Nature structural biology, Vol. 1, No. 8. (August 1994) by S. C. Li, C. M. Deber posted to aa-helicalpropensity-in-membrane by hc5428 on 2008-11-28 14:55:41 as
	Formation of Transmembrane Helices In Vivo--Is Hydrophobicity All that Matters? [My Copy] J. Gen. Physiol., Vol. 129, No. 5. (30 April 2007), pp. 353-356. by Gunnar von Heijne posted to aa-lipid-propensity-positional asparagine membrane-insertion-energetics by hc5428 on 2008-11-17 19:28:04 as along with 2 people and 1 group thaliana xdeupi LabCompMed
	Empirical lipid propensities of amino acid residues in multispan alpha helical membrane proteins. [My Copy] Proteins, Vol. 59, No. 3. (15 May 2005), pp. 496-509. by L. Adamian, V. Nanda, W. F. DeGrado, J. Liang posted to aa-lipid-propensity-positional mutation-data-matrix by hc5428 on 2008-11-14 13:59:28 as along with 1 person thaliana
	E(z), a depth-dependent potential for assessing the energies of insertion of amino acid side-chains into membranes: derivation and applications to determining the orientation of transmembrane and interfacial helices. [My Copy] J Mol Biol, Vol. 366, No. 2. (16 February 2007), pp. 436-448. by A. Senes, D. C. Chadi, P. B. Law, R. F. Walters, V. Nanda, W. F. Degrado posted to membrane-insertion-energetics snorkelmodel by hc5428 on 2008-11-14 11:52:09 as along with 1 person thaliana
	Computational design of water-soluble analogues of the potassium channel KcsA. [My Copy] Proc Natl Acad Sci U S A, Vol. 101, No. 7. (17 February 2004), pp. 1828-1833. by A. M. Slovic, H. Kono, J. D. Lear, J. G. Saven, W. F. DeGrado posted to mutagenesis water-soluble-membraneprotein by hc5428 on 2008-11-14 11:48:02 as along with 2 people dfgreen jwm
	Association of a model transmembrane peptide containing gly in a heptad sequence motif. [My Copy] Biophysical journal, Vol. 87, No. 5. (November 2004), pp. 3421-3429. by J. D. Lear, A. L. Stouffer, H. Gratkowski, V. Nanda, W. F. Degrado posted to gly gpamotif ms1 oligomerization parallelantiparallel toxcat by hc5428 on 2008-11-03 17:28:44 as
	The affinity of GXXXG motifs in transmembrane helix-helix interactions is modulated by long-range communication. [My Copy] The Journal of biological chemistry, Vol. 279, No. 16. (16 April 2004), pp. 16591-16597. by R. A. Melnyk, S. Kim, A. R. Curran, D. M. Engelman, J. U. Bowie, C. M. Deber posted to gpa gpamotif m13mcp mutagenesis by hc5428 on 2008-11-03 17:26:22 as
	Cooperativity and specificity of association of a designed transmembrane peptide. [My Copy] Biophysical journal, Vol. 83, No. 3. (September 2002), pp. 1613-1619. by H. Gratkowski, Q. H. Dai, A. J. Wand, W. F. DeGrado, J. D. Lear posted to detergents ms1 oligomerization by hc5428 on 2008-10-30 16:16:18 as
	Position-dependence of stabilizing polar interactions of asparagine in transmembrane helical bundles. [My Copy] Biochemistry, Vol. 42, No. 21. (3 June 2003), pp. 6400-6407. by J. D. Lear, H. Gratkowski, L. Adamian, J. Liang, W. F. DeGrado posted to aa-occurence asparagine detergents oligomerization oligomerizingpolarresidues by hc5428 on 2008-10-30 15:11:14 as
	Modulation of glycophorin A transmembrane helix interactions by lipid bilayers: molecular dynamics calculations [My Copy] Journal of Molecular Biology, Vol. 302, No. 3. (22 September 2000), pp. 727-746. by Horia I. Petrache, Alan Grossfield, Kevin R. Mackenzie, Donald M. Engelman, Thomas B. Woolf posted to bilayer detergents gpa gpamotif hydrophobicmismatch oligomerization by hc5428 on 2008-10-29 16:27:06 as along with 1 person agrossfield
	Complex interactions at the helix-helix interface stabilize the glycophorin A transmembrane dimer. [My Copy] Journal of molecular biology, Vol. 343, No. 5. (5 November 2004), pp. 1487-1497. by A. K. Doura, K. G. Fleming posted to gasmotif gpa gpamotif mutagenesis by hc5428 on 2008-10-29 13:07:24 as
	Thermodynamics of glycophorin A transmembrane helix dimerization in C14 betaine micelles. [My Copy] Biophysical chemistry, Vol. 108, No. 1-3. (1 March 2004), pp. 43-49. by K. G. Fleming, C. C. Ren, A. K. Doura, M. E. Eisley, F. J. Kobus, A. M. Stanley posted to auc detergents gpa by hc5428 on 2008-10-29 11:01:19 as
	Direct analysis of protein sedimentation equilibrium in detergent solutions without density matching. [My Copy] Analytical biochemistry, Vol. 320, No. 2. (15 September 2003), pp. 185-192. by D. Noy, J. R. Calhoun, J. D. Lear posted to auc by hc5428 on 2008-10-28 16:19:05 as
	Modest stabilization by most hydrogen-bonded side-chain interactions in membrane proteins [My Copy] Nature, Vol. 453, No. 7199. (25 May 2008), pp. 1266-1270. by Nathan H. Joh, Andrew Min, Salem Faham, et al.Julian P. Whitelegge, Duan Yang, Virgil L. Woods, James U. Bowie posted to oligomerizingpolarresidues by hc5428 on 2008-10-28 16:16:36 as along with 1 person and 1 group sobolevnrm baker-group
	Changes in apparent free energy of helix-helix dimerization in a biological membrane due to point mutations. [My Copy] Journal of molecular biology, Vol. 371, No. 2. (10 August 2007), pp. 422-434. by M. T. Duong, T. M. Jaszewski, K. G. Fleming, K. R. MacKenzie posted to gpa mutagenesis oligomerizingpolarresidues sds-vs-bilayer toxcat by hc5428 on 2008-10-27 17:57:51 as
	The effect of point mutations on the free energy of transmembrane alpha-helix dimerization. [My Copy] Journal of molecular biology, Vol. 272, No. 2. (19 September 1997), pp. 266-275. by K. G. Fleming, A. L. Ackerman, D. M. Engelman posted to gpa mutagenesis by hc5428 on 2008-10-27 12:03:50 as
	A mutation data matrix for transmembrane proteins. [My Copy] FEBS letters, Vol. 339, No. 3. (21 February 1994), pp. 269-275. by D. T. Jones, W. R. Taylor, J. M. Thornton posted to aa-occurence mutation-data-matrix tm by hc5428 on 2008-10-21 10:29:35 as
	Functional imaging of microdomains in cell membranes [My Copy] European Biophysics Journal by James Duggan, Ghadir Jamal, Mark Tilley, et al.Ben Davis, Graeme Mckenzie, Kelly Vere, Michael Somekh, Paul O’shea, Helen Harris posted to di-8-anepps far-field-microscopy fpe sted storm by hc5428 on 2008-10-21 10:25:20 as along with 2 people ARobson paulschlesinger
	The use of fluoresceinphosphatidylethanolamine (FPE) as a real-time probe for peptide-membrane interactions. [My Copy] Molecular membrane biology, Vol. 12, No. 2. (n 1995), pp. 183-192. by J. Wall, C. A. Golding, M. Van Veen, P. O'Shea posted to fpe by hc5428 on 2008-10-21 10:20:46 as
	Physical landscapes in biological membranes: physico-chemical terrains for spatio-temporal control of biomolecular interactions and behaviour. [My Copy] Philosophical transactions. Series A, Mathematical, physical, and engineering sciences, Vol. 363, No. 1827. (15 February 2005), pp. 575-588. by P. O'Shea posted to di-8-anepps fpe membranedipolepotential membranesurfacepotential by hc5428 on 2008-10-21 10:17:46 as
	Time resolution of binding and membrane insertion of a mitochondrial signal peptide: correlation with structural changes and evidence for cooperativity. [My Copy] Biochemistry, Vol. 35, No. 33. (20 August 1996), pp. 10931-10937. by C. Golding, S. Senior, M. T. Wilson, P. O'Shea posted to fpe membranesurfacepotential by hc5428 on 2008-10-21 10:14:01 as
	Characterization of a membrane protein folding motif, the Ser zipper, using designed peptides. [My Copy] Journal of molecular biology, Vol. 359, No. 4. (16 June 2006), pp. 930-939. by B. North, L. Cristian, X. Fu Stowell, J. D. Lear, J. G. Saven, W. F. Degrado posted to packingmotifs parallelantiparallel serinezipper by hc5428 on 2008-10-13 15:25:36 as
	Sequence context strongly modulates association of polar residues in transmembrane helices. [My Copy] Journal of molecular biology, Vol. 331, No. 1. (1 August 2003), pp. 255-262. by J. P. Dawson, R. A. Melnyk, C. M. Deber, D. M. Engelman posted to m13mcp oligomerizingpolarresidues by hc5428 on 2008-10-13 15:19:56 as
	Aromatic and cation-pi interactions enhance helix-helix association in a membrane environment. [My Copy] Biochemistry, Vol. 46, No. 32. (14 August 2007), pp. 9208-9214. by R. M. Johnson, K. Hecht, C. M. Deber posted to ai-peptide aromaticpacking cation-pi-interactions packingmotifs by hc5428 on 2008-10-13 15:10:25 as
	Induction of nonbilayer structures in diacylphosphatidylcholine model membranes by transmembrane alpha-helical peptides: importance of hydrophobic mismatch and proposed role of tryptophans. [My Copy] Biochemistry, Vol. 35, No. 3. (23 January 1996), pp. 1037-1045. by J. A. Killian, I. Salemink, M. R. de Planque, G. Lindblom, R. E. Koeppe, D. V. Greathouse posted to tm tryptophan walp tmlength by hc5428 on 2008-10-09 11:38:36 as
	Interhelical hydrogen bonding drives strong interactions in membrane proteins. [My Copy] Nature structural biology, Vol. 7, No. 2. (February 2000), pp. 154-160. by F. X. Zhou, M. J. Cocco, W. P. Russ, A. T. Brunger, D. M. Engelman posted to asparagine gcn4 oligomerization by hc5428 on 2008-10-09 11:34:13 as
	Helix packing angle preferences. [My Copy] Nature structural biology, Vol. 4, No. 11. (November 1997), pp. 915-917. by J. U. Bowie posted to packingangle by hc5428 on 2008-10-09 11:27:53 as
	Helix packing in membrane proteins. [My Copy] Journal of molecular biology, Vol. 272, No. 5. (10 October 1997), pp. 780-789. by J. U. Bowie posted to tm tmlength packingangle by hc5428 on 2008-10-09 11:25:45 as
	Understanding membrane protein structure by design. [My Copy] Nature structural biology, Vol. 7, No. 2. (February 2000), pp. 91-94. by J. U. Bowie posted to gcn4 gpa leucinezipper packingmotifs by hc5428 on 2008-10-09 11:20:31 as
	Functional Bionetworks from Nanoliter Water Droplets [My Copy] J. Am. Chem. Soc., Vol. 129, No. 27. (11 July 2007), pp. 8650-8655. by M. A. Holden, D. Needham, H. Bayley posted to bilayer by hc5428 on 2008-10-09 11:13:40 as
	Helix-helix packing in a membrane-like environment. [My Copy] Journal of molecular biology, Vol. 272, No. 4. (3 October 1997), pp. 633-641. by I. Mingarro, A. Elofsson, G. von Heijne posted to gpa mutagenesis packingmotifs by hc5428 on 2008-10-09 11:05:25 as
	Effects of 'hydrophobic mismatch' on the location of transmembrane helices in the ER membrane. [My Copy] FEBS letters, Vol. 496, No. 2-3. (11 May 2001), pp. 96-100. by M. Monné, G. von Heijne posted to snorkelmodel hydrophobicmismatch by hc5428 on 2008-10-09 11:01:22 as
	Emulating membrane protein evolution by rational design. [My Copy] Science, Vol. 315, No. 5816. (2 March 2007), pp. 1282-1284. by M. Rapp, S. Seppälä, E. Granseth, G. von Heijne posted to positiveinsiderule by hc5428 on 2008-10-09 10:55:29 as along with 4 people bjorns grahamc martainn viktor21614
	Polar residues drive association of polyleucine transmembrane helices. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 98, No. 5. (27 February 2001), pp. 2250-2255. by F. X. Zhou, H. J. Merianos, A. T. Brunger, D. M. Engelman posted to polyleucine oligomerizingpolarresidues by hc5428 on 2008-10-09 10:50:02 as
	A dimerization motif for transmembrane alpha-helices. [My Copy] Nature structural biology, Vol. 1, No. 3. (March 1994), pp. 157-163. by M. A. Lemmon, H. R. Treutlein, P. D. Adams, A. T. Brünger, D. M. Engelman posted to mutagenesis polyleucine gpamotif by hc5428 on 2008-10-09 10:46:13 as
	Asparagine-mediated self-association of a model transmembrane helix. [My Copy] Nature structural biology, Vol. 7, No. 2. (February 2000), pp. 161-166. by C. Choma, H. Gratkowski, J. D. Lear, W. F. DeGrado posted to asparagine ms1 oligomerisation by hc5428 on 2008-10-09 10:40:47 as

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gpa	10
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asparagine	6
ms1	5
oligomerization	5
gasmotif	5
gpamotif	5
fpe	4
tm	4
membrane-insertion-energetics	3
aa-occurence	3
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hydrogenbond-in-membrane	2
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polyleucine	2
leucinezipper	1
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tryptophan	1
cation-pi-interactions	1
champs	1
sds-vs-bilayer	1
membranedipolepotential	1
aa-helicalpropensity-scale	1
two-stage-model	1
ai-peptide	1
backbone-hydrogen-bond	1
sted	1
linking-different-oligomerization-domains	1
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aromaticpacking	1
storm	1
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antimicrobialpeptide	1
c-alpha-h--o-hydrogenbond	1
positiveinsiderule	1
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