heliopais's library 1101 articles Export

	MicroRNAs: small RNAs with a big role in gene regulation [My Copy] Nature Reviews Genetics, Vol. 5, No. 7. (01 July 2004), pp. 522-531. by Lin He, Gregory J. Hannon posted to review microrna by heliopais on 2009-11-05 14:31:04 as along with 8 people and 1 group GeeSharpMinor fishtank vvoorr guhjy jfr dchughes ealloza cerami microRNA
	Detecting microRNA binding and siRNA off-target effects from expression data. [My Copy] Nature methods, Vol. 5, No. 12. (2 December 2008), pp. 1023-1025. by Stijn van Dongen, Cei Abreu-Goodger, Anton J. Enright posted to sylamer sirna microrna_mrna microrna by heliopais on 2009-11-05 11:57:08 as along with 7 people and 2 groups isimpson gdb jfr valeriehilgers russel12 megraw samgj Jarman Lab microRNA
	qiRNA is a new type of small interfering RNA induced by DNA damage. [My Copy] Nature, Vol. 459, No. 7244. (14 May 2009), pp. 274-277. by H. C. Lee, S. S. Chang, S. Choudhary, et al.A. P. Aalto, M. Maiti, D. H. Bamford, Y. Liu posted to qirna non_coding_rna mirna argonaute by heliopais on 2009-11-05 11:54:14 as along with 12 people and 1 group bcondon gdb Terkko t08681mn valeriehilgers daforerog absterga leliavski pengchy djkt TRHvidsten fenghezi microRNA
	Argonaute HITS-CLIP decodes microRNA\|[ndash]\|mRNA interaction maps [My Copy] Nature, Vol. 460, No. 7254. (17 June 2009), pp. 479-486. by Sung W. Chi, Julie B. Zang, Aldo Mele, Robert B. Darnell posted to risc-ip microrna_target_prediction microrna hits-clip by heliopais on 2009-11-05 09:56:32 as along with 16 people and 3 groups pattersonee guhjy hcoller stajich rschulz natstreet kongl gbloeb fenghezi diaz0058 gdb jbhiatt megraw tonamswish giovenko valeriehilgers Mycology Journal picks microRNA
	Beyond Mfold: recent advances in RNA bioinformatics. [My Copy] Journal of biotechnology, Vol. 124, No. 1. (25 June 2006), pp. 41-55. by Jens Reeder, Matthias Höchsmann, Marc Rehmsmeier, Björn Voss, Robert Giegerich posted to rna_secondary_structure by heliopais on 2009-11-05 09:44:37 as along with 19 people and 4 groups daforerog danaiancu rb_india ellarond GustavoLacerda hrogers marcius eckart_bindewald tardigrade andersbj arcticrasta mtagaya condon Hosna Eonwe cthachuk stajich physics reyez microRNA beta BioinfoCIPF SGU-CIPF
	Human microRNAs co-silence in well-separated groups and have different predicted essentialities. [My Copy] Bioinformatics, Vol. 25, No. 8. (15 April 2009), pp. 1063-1069. by Gábor Boross, Katalin Orosz, Illés J. Farkas posted to microrna_target microrna by heliopais on 2009-11-05 09:38:35 as along with 6 people and 2 groups jfr samgj shikin ealloza daforerog valeriehilgers microRNA BenosLab
	RNA-seq: An assessment of technical reproducibility and comparison with gene expression arrays [My Copy] Genome Research, Vol. 18, No. 9. (11 September 2008), pp. 1509-1517. by John C. Marioni, Christopher E. Mason, Shrikant M. Mane, Matthew Stephens, Yoav Gilad posted to rna-seq high-throughput-sequencing benchmark by heliopais on 2009-11-03 17:02:48 as along with 44 people and 2 groups jwfoley debasis maren mtagaya mkiyer stubrown woodson8 jonilaserson burak Ayest ThomasDOtto huali n00c natstreet bandrewfox daed dandaman slevy03 pengchy felsani coela shikin fhalbrit inesdesantiago jmcq lp2 caseybrown jfr dakelley Ema balicea vega lusk semrich vmarshal fpattyn stajich giovanni ela503 Stew guhjy kengg shurjo GustavoLacerda SIMR bioinformatics Mycology
	Novel software package for cross-platform transcriptome analysis (CPTRA) [My Copy] BMC Bioinformatics, Vol. 10, No. Suppl 11. (8 October 2009), S16. by Xin Zhou, Zhen Su, R. Douglas Sammons, et al.Yanhui Peng, Patrick Tranel, C. Neal Stewart, Joshua Yuan posted to software high-throughput-sequencing by heliopais on 2009-11-03 16:57:57 as along with 1 person GeeSharpMinor
	mRNA-Seq whole-transcriptome analysis of a single cell [My Copy] Nature Methods, Vol. 6, No. 5. (06 April 2009), pp. 377-382. by Fuchou Tang, Catalin Barbacioru, Yangzhou Wang, et al.Ellen Nordman, Clarence Lee, Nanlan Xu, Xiaohui Wang, John Bodeau, Brian B. Tuch, Asim Siddiqui, Kaiqin Lao, M. Azim Surani posted to single-cell rna-seq high-throughput-sequencing by heliopais on 2009-11-03 16:50:34 as along with 14 people inesdesantiago manduca debasis Vincent_Rouilly mtagaya woodson8 gdb guhjy kintoki fenghezi absterga jbhiatt pengchy sleepingcell
	Is sequencing enlightenment ending the dark age of the transcriptome? [My Copy] Nature Methods, Vol. 6, No. 10. (01 October 2009), pp. 711-713. by Piero Carninci posted to review high-throughput-sequencing by heliopais on 2009-11-03 16:47:30 as along with 5 people inesdesantiago n00c druvus megraw maren
	Next-generation gap [My Copy] Nature Methods, Vol. 6, No. 11s. (15 October 2009), pp. S2-S5. by John D. McPherson posted to review high-throughput-sequencing by heliopais on 2009-11-03 16:44:16 as along with 1 person GeeSharpMinor
	Transcriptome sequencing of the Microarray Quality Control (MAQC) RNA reference samples using next generation sequencing [My Copy] BMC Genomics, Vol. 10, No. 1. (12 June 2009), 264. by Shrinivasrao Mane, Clive Evans, Kristal Cooper, et al.Oswald Crasta, Otto Folkerts, Stephen Hutchison, Timothy Harkins, Danielle T. Mieg, Jean T. Mieg, Roderick Jensen posted to microrarray high-throughput-sequencing benchmark 454 by heliopais on 2009-11-03 16:41:23 as along with 5 people daforerog GeeSharpMinor guhjy natstreet fenghezi
	Transcript quantification with RNA-Seq data [My Copy] BMC Bioinformatics, Vol. 10, No. Suppl 13. (19 October 2009), P5. by Regina Bohnert, Jonas Behr, Gunnar Ratsch posted to transcript-quantification rna-seq high-throughput-sequencing by heliopais on 2009-11-03 16:28:49 as along with 1 person inesdesantiago
	RNA-Seq-quantitative measurement of expression through massively parallel RNA-sequencing. [My Copy] Methods, Vol. 48, No. 3. (29 March 2009), pp. 249-257. by Brian T. Wilhelm, Josette-Renée R. Landry posted to review high-throughput-sequencing by heliopais on 2009-11-03 15:42:12 as along with 8 people inesdesantiago orzenil n00c woodson8 guhjy tonamswish fenghezi GeeSharpMinor
	Statistical inferences for isoform expression in RNA-Seq [My Copy] Bioinformatics, Vol. 25, No. 8. (15 April 2009), pp. 1026-1032. by Hui Jiang, Wing H. Wong posted to rma-seq isoforms high-throughput-sequencing by heliopais on 2009-11-03 15:30:37 as along with 14 people and 2 groups stubrown GustavoLacerda woodson8 ThomasDOtto stajich guhjy ghattem djkt shikin pengchy vplagnol rschulz jmcq GeeSharpMinor Mycology SIMR bioinformatics
	Measuring differential gene expression by short read sequencing: quantitative comparison to 2-channel gene expression microarrays [My Copy] BMC Genomics, Vol. 10, No. 1. (12 May 2009), 221. by Joshua Bloom, Zia Khan, Leonid Kruglyak, Mona Singh, Amy Caudy posted to microarray high-throughput-sequencing benchmark by heliopais on 2009-11-03 15:20:05 as along with 8 people and 1 group GustavoLacerda GeeSharpMinor n00c TRHvidsten natstreet druvus dswan neils Bioinformatics
	TIGERA: A New Tool for Illumina Gene Expression Reads Analysis [My Copy] Bioinformatics, 2009 Ohio Collaborative Conference, Vol. 0 (2009), pp. 37-41. by Xiaodong Bai, Parwinder S. Grewal posted to solexa software high-throughput-sequencing by heliopais on 2009-11-03 14:56:48 as
	miRDB: a microRNA target prediction and functional annotation database with a wiki interface. [My Copy] RNA (New York, N.Y.), Vol. 14, No. 6. (21 June 2008), pp. 1012-1017. by Xiaowei Wang posted to mirdb microrna database by heliopais on 2009-11-02 16:53:24 as along with 5 people and 1 group jfr daforerog valeriehilgers guhjy bootsy microRNA
	LookSeq: A browser-based viewer for deep sequencing data [My Copy] Genome Research, Vol. 19, No. 11. (2 November 2009), pp. 2125-2132. by Heinrich M. Manske, Dominic P. Kwiatkowski posted to sequence-visualization high-throughput-sequencing by heliopais on 2009-11-02 16:45:29 as along with 23 people and 2 groups inesdesantiago Thaverkamp idonaldson owhitney GustavoLacerda ngehlenborg sandfire fpattyn xianjun katholt stubrown orzenil operon guhjy kongl stajich n00c torfinnnome nuin kshameer neils druvus natstreet BergmanLab Mycology
	Relative contribution of sequence and structure features to the mRNA binding of Argonaute/EIF2-miRNA complexes and the degradation of miRNA targets [My Copy] Genome Research, Vol. 19, No. 11. (2 November 2009), pp. 2009-2020. by Jean Hausser, Markus Landthaler, Lukasz Jaskiewicz, Dimos Gaidatzis, Mihaela Zavolan posted to risc_precipitation microrna_target_prediction microrna by heliopais on 2009-11-02 16:37:52 as along with 4 people and 1 group toni_marco megraw valeriehilgers daforerog microRNA
	A computational screen for mouse signaling pathways targeted by microRNA clusters. [My Copy] RNA (New York, N.Y.), Vol. 14, No. 7. (29 July 2008), pp. 1276-1283. by Jianzhen Xu, Chiwai Wong posted to networks microrna_clusters microrna by heliopais on 2009-11-02 16:34:54 as along with 7 people and 1 group jfr coela guhjy bootsy mtagaya maralena daforerog microRNA
	The MC-Fold and MC-Sym pipeline infers RNA structure from sequence data [My Copy] Nature, Vol. 452, No. 7183. (06 March 2008), pp. 51-55. by Marc Parisien, Francois Major posted to rna_secondary_structure_prediction by heliopais on 2009-11-02 15:51:16 as along with 7 people physics bmduggan puranjoy_b zwang austin elfar reyez
	VarScan: variant detection in massively parallel sequencing of individual and pooled samples [My Copy] Bioinformatics, Vol. 25, No. 17. (1 September 2009), pp. 2283-2285. by Daniel C. Koboldt, Ken Chen, Todd Wylie, et al.David E. Larson, Michael D. McLellan, Elaine R. Mardis, George M. Weinstock, Richard K. Wilson, Li Ding posted to read-mapping high-throughput-sequencing by heliopais on 2009-11-02 13:55:15 as along with 12 people and 3 groups seb1 mkiyer dakelley djkt PabloMarin guhjy n00c orzenil natstreet druvus stajich malcook Journal picks Mycology SIMR bioinformatics
	The Sequence Alignment/Map format and SAMtools [My Copy] Bioinformatics, Vol. 25, No. 16. (8 June 2009), pp. 2078-2079. by Heng Li, Bob Handsaker, Alec Wysoker, et al.Tim Fennell, Jue Ruan, Nils Homer, Gabor Marth, Goncalo Abecasis, Richard Durbin, 1000 Genome Project Data Processing Subgroup posted to read-mapping high-throughput-sequencing by heliopais on 2009-11-02 13:52:57 as along with 25 people and 2 groups seb1 urgi idonaldson GustavoLacerda stubrown cassj kshameer ciax polivares carlosjavierna jandot katholt jmcq guhjy orzenil jasontsai operon farhat AlexBateman chrisamiller nuin n00c natstreet sandfire druvus BergmanLab Journal picks
	TopHat: discovering splice junctions with RNA-Seq [My Copy] Bioinformatics, Vol. 25, No. 9. (1 May 2009), pp. 1105-1111. by Cole Trapnell, Lior Pachter, Steven L. Salzberg posted to read-mapping high-throughput-sequencing by heliopais on 2009-11-02 13:48:14 as along with 21 people and 2 groups dakelley druvus GustavoLacerda stubrown polivares torfinnnome jmcq mtagaya jonilaserson gdb guhjy ThomasDOtto n00c ghattem xingxu djkt vplagnol bertelsen natstreet idoerg vmsr BergmanLab SIMR bioinformatics
	Next-generation DNA sequencing techniques [My Copy] New Biotechnology, Vol. 25, No. 4. (03 April 2009), pp. 195-203. by Wilhelm J. Ansorge posted to review high-throughput-sequencing by heliopais on 2009-11-02 13:36:18 as along with 7 people inesdesantiago natstreet druvus guhjy n00c svenrahmann ImranRaoufMalik
	Computational methods for discovering structural variation with next-generation sequencing [My Copy] Nature Methods, Vol. 6, No. 11s. (15 October 2009), pp. S13-S20. by Paul Medvedev, Monica Stanciu, Michael Brudno posted to review high-throughput-sequencing by heliopais on 2009-11-02 10:59:24 as along with 11 people and 1 group kiekyon michaelbarton jasontsai sameersoi druvus GeeSharpMinor Peiyong n00c gdv desany qayub Journal picks
	Concomitant suppression of three target genes can explain the impact of a microRNA on metastasis [My Copy] Genes & Development (29 October 2009) by Scott Valastyan, Nathan Benaich, Amelia Chang, Ferenc Reinhardt, Robert A. Weinberg posted to mir-31 microrna cancer by heliopais on 2009-11-02 10:56:24 as along with 3 people and 1 group songpku pattersonee valeriehilgers microRNA
	What would you do if you could sequence everything? [My Copy] Nature Biotechnology, Vol. 26, No. 10. (01 October 2008), pp. 1125-1133. by Avak Kahvejian, John Quackenbush, John F. Thompson posted to review high-throughput-sequencing by heliopais on 2009-11-02 09:44:58 as along with 16 people inesdesantiago stubrown installe Annab jfr Borelli jbhiatt Pascalichouchou bertelsen frohike natstreet druvus reyez alexknight psique GeeSharpMinor
	Next-generation DNA sequencing [My Copy] Nature Biotechnology, Vol. 26, No. 10. (09 October 2008), pp. 1135-1145. by Jay Shendure, Hanlee Ji posted to review high-throughput-sequencing by heliopais on 2009-11-02 09:40:16 as along with 41 people and 3 groups giovenko seb1 installe niallhaslam Vincent_Rouilly rschulz fishtank bluto Annab katholt jmcq michaelbarton n00c jfr dna nzm farhat idoerg mhz mmartin antonkratz jbhiatt yupu behindtherabbit guhjy Pascalichouchou frohike dakelley ptrobajo zwang Zephyrus psique natstreet druvus nuin alexknight reyez dbk wsjames pengchy GeeSharpMinor Bioinformatics Roswell Cancer Crosstalk Oxford Virology
	inGAP: an integrated next-generation genome analysis pipeline [My Copy] Bioinformatics (30 October 2009), btp615. by Ji Qi, Fangqing Zhao, Anne Buboltz, Stephan C. Schuster posted to snp read-mapping high-throughput-sequencing by heliopais on 2009-11-02 09:00:35 as along with 4 people jasontsai natstreet n00c druvus
	The potential and challenges of nanopore sequencing [My Copy] Nature Biotechnology, Vol. 26, No. 10. (09 October 2008), pp. 1146-1153. by Daniel Branton, David W. Deamer, Andre Marziali, et al.Hagan Bayley, Steven A. Benner, Thomas Butler, Massimiliano Di Ventra, Slaven Garaj, Andrew Hibbs, Xiaohua Huang, Stevan B. Jovanovich, Predrag S. Krstic, Stuart Lindsay, Xinsheng S. Ling, Carlos H. Mastrangelo, Amit Meller, John S. Oliver, Yuriy V. Pershin, J. Michael Ramsey, Robert Riehn, Gautam V. Soni, Vincent Tabard-Cossa, Meni Wanunu, Matthew Wiggin, Jeffery A. Schloss posted to nanopore-sequencing high-throughput-sequencing by heliopais on 2009-11-01 18:19:33 as along with 9 people chvlyl inesdesantiago guhjy idoerg jbhiatt sharpstones alexknight reyez GeeSharpMinor
	Mapping and quantifying mammalian transcriptomes by RNA-Seq. [My Copy] Nature methods, Vol. 5, No. 7. (30 May 2008), pp. 621-628. by Ali Mortazavi, Brian A. Williams, Kenneth McCue, Lorian Schaeffer, Barbara Wold posted to mrna-profiling high-throughput-sequencing by heliopais on 2009-11-01 09:16:38 as along with 39 people and 2 groups jwfoley juokcho aktas debasis bertelsen idonaldson darian stubrown dswan ewilban1 mtagaya woodson8 burak jonilaserson inesdesantiago ThomasDOtto n00c GustavoG ghattem vplagnol druvus cfvillalta vmsr poschm dandaman shikin jmcq rschulz lp2 tmcphillips jfr myourshaw megraw GeeSharpMinor caseybrown xingxu guhjy shurjo gdb Bioinformatics SIMR bioinformatics
	Stem cell transcriptome profiling via massive-scale mRNA sequencing [My Copy] Nature Methods, Vol. 5, No. 7. (30 May 2008), pp. 613-619. by Nicole Cloonan, Alistair R. R. Forrest, Gabriel Kolle, et al.Brooke B. A. Gardiner, Geoffrey J. Faulkner, Mellissa K. Brown, Darrin F. Taylor, Anita L. Steptoe, Shivangi Wani, Graeme Bethel, Alan J. Robertson, Andrew C. Perkins, Stephen J. Bruce, Clarence C. Lee, Swati S. Ranade, Heather E. Peckham, Jonathan M. Manning, Kevin J. McKernan, Sean M. Grimmond posted to mrna-profiling high-throughput-sequencing by heliopais on 2009-11-01 09:12:38 as along with 20 people jwfoley jmanning2k stubrown cassj n00c burak natstreet poschm felsani jbhiatt vplagnol rschulz umit myourshaw megraw inesdesantiago GeeSharpMinor caseybrown guhjy gdb
	Computation for ChIP-seq and RNA-seq studies [My Copy] Nature Methods, Vol. 6, No. 11s. (15 October 2009), pp. S22-S32. by Shirley Pepke, Barbara Wold, Ali Mortazavi posted to review high-throughput-sequencing by heliopais on 2009-10-30 17:15:59 as along with 7 people inesdesantiago Baschl polivares jwfoley druvus GeeSharpMinor chvlyl
	DEGseq: an R package for identifying differentially expressed genes from RNA-seq data. [My Copy] Bioinformatics (Oxford, England) (24 October 2009), btp612. by Likun Wang, Zhixing Feng, Xi Wang, Xiaowo Wang, Xuegong Zhang posted to high-throughput-sequencing differential_expression by heliopais on 2009-10-30 10:28:55 as along with 5 people jmeppley GeeSharpMinor juokcho natstreet druvus
	NGSView: an extensible open source editor for next-generation sequencing data. [My Copy] Bioinformatics (Oxford, England) (24 October 2009), btp611. by Erik Arner, Yoshihide Hayashizaki, Carsten O. Daub posted to software high-throughput-sequencing by heliopais on 2009-10-30 10:24:06 as along with 3 people operon n00c druvus
	Ago-TNRC6 triggers microRNA-mediated decay by promoting two deadenylation steps. [My Copy] Nature structural & molecular biology (18 October 2009) by Chyi-Ying Y. Chen, Dinghai Zheng, Zhenfang Xia, Ann-Bin B. Shyu posted to tnrc6 microrna_modes_of_action microrna gw182 argonaute by heliopais on 2009-10-30 10:16:37 as along with 2 people and 1 group gbloeb valeriehilgers microRNA
	Absolute quantification of microRNAs by using a universal reference. [My Copy] RNA (New York, N.Y.) (27 October 2009) by Ute Bissels, Stefan Wild, Stefan Tomiuk, et al.Angela Holste, Markus Hafner, Thomas Tuschl, Andreas Bosio posted to normalization microrna-microarray microrna by heliopais on 2009-10-30 10:05:37 as along with 1 person and 1 group valeriehilgers microRNA
	Alternative Processing of Primary microRNA Transcripts by Drosha Generates 5′ End Variation of Mature microRNA [My Copy] PLoS ONE, Vol. 4, No. 10. (27 October 2009), e7566. by Haoquan Wu, Chunting Ye, Danielle Ramirez, N. Manjunath posted to microrna isomir drosha by heliopais on 2009-10-30 09:59:21 as along with 3 people and 1 group hrogers fishtank samgj microRNA
	BARCRAWL and BARTAB: Software tools for the design and implementation of barcoded primers for highly multiplexed DNA sequencing [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (29 October 2009), 362. by Daniel Frank posted to high-throughput-sequencing barcodes barcode_design by heliopais on 2009-10-30 09:49:23 as along with 4 people and 1 group natstreet druvus MarkFiers ppgardne Journal picks
	The GNUMAP Algorithm: Unbiased Probabilistic Mapping of Oligonucleotides from Next-Generation Sequencing. [My Copy] Bioinformatics (Oxford, England) (27 October 2009), btp614. by Nathan L. Clement, Quinn Snell, Mark J. Clement, et al.Peter C. Hollenhorst, Jahnvi Purwar, Barbara J. Graves, Bradley R. Cairns, W. Evan Johnson posted to read-mapping high-throughput-sequencing by heliopais on 2009-10-30 09:39:24 as along with 3 people operon n00c druvus
	ArrayMining: a modular web-application for microarray analysis combining ensemble and consensus methods with cross-study normalization [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (28 October 2009), 358. by Enrico Glaab, Jonathan Garibaldi, Natalio Krasnogor posted to web_tools software microarray arraymining by heliopais on 2009-10-30 09:20:37 as along with 1 person neils
	MicroRazerS: Rapid alignment of small RNA reads [My Copy] Bioinformatics (29 October 2009), btp601. by Anne-Katrin Emde, Marcel Grunert, David Weese, Knut Reinert, Silke R. Sperling posted to read-mapping high-throughput-sequencing by heliopais on 2009-10-30 09:12:13 as along with 1 person druvus
	Getting Started in Gene Expression Microarray Analysis [My Copy] PLoS Computational Biology, Vol. 5, No. 10. (30 October 2009), e1000543. by Donna K. Slonim, Itai Yanai posted to review microarray by heliopais on 2009-10-30 08:57:50 as along with 6 people and 1 group inesdesantiago dswan iskathy Fournier34 renatomilani ptrobajo Bioinformatics
	Maturation of MicroRNA Is Hormonally Regulated by a Nuclear Receptor. [My Copy] Molecular Cell, Vol. 36, No. 2. (23 October 2009), pp. 340-347. by Kaoru Yamagata, Sally Fujiyama, Saya Ito, et al.Takashi Ueda, Takuya Murata, Masanori Naitou, Ken-Ichi Takeyama, Yasuhiro Minami, Bert W. O'Malley, Shigeaki Kato posted to microrna-regulation microrna by heliopais on 2009-10-29 18:50:52 as along with 2 people and 1 group tonamswish valeriehilgers microRNA
	Chromatin poises miRNA- and protein-coding genes for expression. [My Copy] Genome Research, Vol. 19, No. 10. (27 October 2009), pp. 1742-1751. by Artem Barski, Raja Jothi, Suresh Cuddapah, et al.Kairong Cui, Tae-Young Y. Roh, Dustin E. Schones, Keji Zhao posted to microrna high-throughput-sequencing by heliopais on 2009-10-29 18:40:07 as along with 8 people and 2 groups samgj polivares megraw inesdesantiago fpattyn djkt fenghezi idonaldson microRNA Neuroblastoma
	Identification of new microRNA genes and aberrant microRNA profiles in childhood acute lymphoblastic leukemia. [My Copy] Leukemia, Vol. 23, No. 2. (16 February 2009), pp. 313-322. by D. Schotte, J. C. Chau, G. Sylvester, et al.G. Liu, C. Chen, V. H. van der Velden, M. J. Broekhuis, T. C. Peters, R. Pieters, M. L. den Boer posted to mir-1979 mir-1975 microrna leukemia cancer by heliopais on 2009-10-29 16:59:19 as along with 3 people and 1 group tonamswish tibbitts samgj microRNA
	Understanding How miRNAs Post-Transcriptionally Regulate Gene Expression [My Copy] miRNA Regulation of the Translational Machinery In miRNA Regulation of the Translational Machinery (2010), pp. 1-20. by Marc R. Fabian, Thomas R. Sundermeier, Nahum Sonenberg posted to review microrna_modes_of_action microrna by heliopais on 2009-10-29 14:36:23 as along with 1 group microRNA
	An integrated approach for experimental target identification of hypoxia-induced miR-210. [My Copy] The Journal of biological chemistry (13 October 2009) by Pasquale Fasanaro, Simona Greco, Maria Lorenzi, et al.Mario Pescatori, Maura Brioschi, Ritu Kulshreshtha, Cristina Banfi, Andrew Stubbs, George A. Calin, Mircea Ivan, Maurizio C. Capogrossi, Fabio Martelli posted to rna22 risc_precipitation mir-210 microrna hypoxia by heliopais on 2009-10-29 14:33:01 as along with 2 people and 1 group tonamswish guhjy microRNA

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microrna	597
microarray	137
review	105
microrna_target_prediction	88
high-throughput-sequencing	71
microrna-biogenesis	46
genetic_regulatory_network	43
transcription_factor	41
evolution	35
gene_sets	35
grn	33
microrna_microarray	33
microrna_gene_finding	32
microrna_expression	31
microrna-regulation	27
database	22
microrna_modes_of_action	22
network_inference	22
argonaute	19
rna_secondary_structure	19
microrna-plant	18
motif_finding	18
sirna	18
dicer	16
probesets	16
networks	15
cancer	14
mir-206	14
chondrocyte	13
gene_ontology	13
microrna-post-transcriptional-regulation	13
read-mapping	13
rna	13
differential_expression	12
microrna-networks	12
rna_silencing	12
myo-mir	11
polya	11
smad	11
tgf-beta	11
microrna_target_architecture	10
mir-1	10
bone_formation	9
let-7	9
non_coding_rna	9
bacteria	8
drosha	8
evolutionary_dynamics	8
illumina	8
microarray_normalization	8
solexa	8
genetic_regulation	7
microrna_transcription	7
affymetrix	6
bmp2	6
expressionvalues	6
gene_regulation	6
microrna_activation	6
microrna-transcriptional-regulation	6
risc_precipitation	6
tools	6
argonaute_loading	5
barcodes	5
binding_site_prediction	5
book	5
c_elegans	5
cxcl12	5
dgcr8	5
enhancer	5
genomics	5
microrna_mrna	5
mirna	5
normalization	5
pseudoknot	5
statistics	5
breast_cancer	4
c2c12	4
cartilage	4
cartilage_and_bone	4
chicken_microrna	4
cross_platform	4
lin-28	4
microarray_functional_analysis	4
microrna-mathematical-model	4
microrna_silac	4
mir-133	4
mir-140	4
myo-mirs	4
newsandviews	4
r	4
rna22	4
software	4
srf	4
transcription	4
utr	4
454	3
alignment	3
annotation	3
antimicrorna	3
bantam	3
barcode_design	3
benchmark	3
drosophila	3
exportin-5	3
functional_genomics	3
gene_expression	3
genmir	3
human	3
isomir	3
lin-4	3
microrna_target	3
mir-122	3
mir-124	3
non_coding_dna	3
pirna	3
rnai	3
rna_secondary_structure_prediction	3
rna-seq	3
runx2	3
sequence_alignment	3
target_prediction	3
12_drosophila	2
anti-sense-microrna	2
au_rich_elements	2
bayesian_network	2
bone	2
chemokine	2
circadian-clock	2
cow	2
dicer-knockout	2
feedback_loop	2
frog	2
functional_annotation	2
hand2	2
heart	2
hypoxia	2
il-1	2
limma	2
microarray_detection	2
microarray_inference	2
microprocessor	2
microrna-biogensis	2
microrna_discovery	2
microrna-expression	2
microrna_instability	2
microrna_kinetic_model	2
microrna-location	2
microrna-microarray	2
microrna_profiling	2
microrrna	2
mir-14	2
mir-155	2
mir-17	2
mir-200	2
mir-210	2
mir-24	2
mir-449	2
mir-92	2
mrna-profiling	2
myc	2
pasha	2
p-bodies	2
plants	2
pre-mirna	2
prisoners_dilemma	2
regulatory_elements	2
risc-ip	2
secondary_targets	2
small-rna	2
snp	2
socio_biology	2
sox	2
stem-cell	2
stress-response	2
target_architecture	2
translation	2
worm	2
zebrafish	2
affyprobeminer	1
alternative-splicing	1
antagomir	1
arraymining	1
bayesian	1
bibliographic_information	1
bibliometrics	1
biochemistry	1
bio_complexity	1
biography	1
bioprospector	1
b_mori	1
bmp-6	1
bonferroni_adjustments	1
c3h10t12	1
cdk	1
cell-cell-adhesion	1
chicken	1
chip-seq	1
chlamydomonas	1
chondrogenesis	1
chordate	1
claudin	1
clustering	1
cns	1
commentary	1
compmoby	1
computational_biology	1
connexin43	1
core_tf	1
crystal_structures	1
data-sharing	1
delta_notch	1
digital_gene_expression	1
dnasudoku	1
drosohila	1
e2f	1
e2f1	1
e2f2	1
editorial	1
embryonic_growth	1
emt	1
enrichment	1
erk	1
error-correction	1
estrogen	1
evo-devo	1
false_discovery_rate	1
feedback	1
fibroblast	1
fly	1
fox	1
gene_finding	1
gene_regulatory_networks	1
genome	1
genome_browser	1
go	1
gpu	1
gsea	1
gw182	1
hasty	1
hcv_infection	1
hdac	1
heat_shock	1
hematopoiesis	1
herpes	1
histone	1
hits-clip	1
hox	1
human_mobility	1
hyl1	1
immunology	1
immunoprecipitation	1
impact_factor	1
indirect_reciprocity	1
information_theory	1
isoforms	1
language	1
latex	1
leukemia	1
loess	1
lsy-6	1
lumi	1
mapk	1
medicago_truncatula	1
micorna-post-transcriptional-regulation	1
micorrna_networks	1
microblogging	1
microna_microarray	1
microrarray	1
microrna_clusters	1
microrna-genomics	1
microrna-human-specific	1
microrna_ko	1
microrna-localization	1
microrna-medical-application	1
microrna-mrna-profiling	1
microrna-network	1
microrna-offset	1
microrna_structure	1
microrna-turnover	1
micrornra	1
mir-143	1
mir-145	1
mir-181	1
mir-1975	1
mir-1979	1
mir-199	1
mir-21	1
mir-26	1
mir-31	1
mir-34	1
mir-9	1
mirbase	1
mirdb	1
mirexpress	1
mirna_biogenesis	1
model_checking	1
modelling	1
molecular-dynamics	1
mouse	1
mrna	1
msc	1
myogenesis	1
nanopore-sequencing	1
notch3	1
obesity	1
occludin	1
omics	1
open_science	1
organization	1
osteoblast	1
osteogenesis	1
pap	1
patman	1
pca	1
pdgf	1
pig	1
pita	1
piwi	1
planarians	1
platypus	1
pr_domain	1
pri-mirna	1
probabilistic_model	1
promoters	1
provisional	1
qirna	1
r2d2	1
random_set	1
reduce	1
regulation	1
regulatory_network	1
reporter_systems	1
reputation	1
risc	1
risc-availability	1
rits	1
rma	1
rma-seq	1
rnaalifold	1
rna-binding-protein	1
robustness	1
science_divulgation	1
science_fiction	1
self_organizing_map	1
sequence-visualization	1
sequencing_technologies	1
sfold	1
shp	1
single-cell	1
small_rna_sequencing	1
solid	1
sox9	1
starmir	1
stochastic_model	1
strand-selection	1
sylamer	1
synthetic_biology	1
synthetic-sample	1
tarbp2	1
target-in-orf	1
target-mimics	1
targetminer	1
targetscan	1
t_cell_development	1
ten_simple_rules	1
text_mining	1
time_series	1
tnrc6	1
transcription_factor_binding_sites	1
transcript-quantification	1
transmir	1
transposable_elements	1
web_tools	1
wnt	1

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