heliopais's review [117 articles] Export

Recent papers added to heliopais's library classified by the tag review. You can also see everyone's review.

	Small RNA Regulators of Gene Expression [My Copy] Cell, Vol. 134, No. 6. (19 September 2008), pp. 899-902. by J. Neilson, P. Sharp posted to small-rna review microrna lasker_foundation by heliopais on 2009-12-17 09:20:26 as along with 2 people and 1 group valeriehilgers zhlei microRNA
	Reverse engineering and verification of gene networks: Principles, assumptions, and limitations of present methods and future perspectives [My Copy] Journal of Biotechnology, Vol. 144, No. 3. (22 November 2009), pp. 190-203. by Feng He, Rudi Balling, An-Ping Zeng posted to review gene_regulatory_networks by heliopais on 2009-12-07 12:21:09 as
	The evolution of our thinking about microRNAs [My Copy] Nature Medicine, Vol. 14, No. 10. (2008), pp. 1036-1040. by Victor Ambros posted to review microrna by heliopais on 2009-12-01 12:26:53 as along with 5 people and 1 group ealloza jfr valeriehilgers martin-novak tmmurali microRNA
	Bioinformatics approaches for genomics and post genomics applications of next-generation sequencing [My Copy] Briefings in Bioinformatics In Brief Bioinform (27 October 2009), bbp046. by David S. Horner, Giulio Pavesi, Tiziana Castrignano, et al.Paolo D. De Meo, Sabino Liuni, Michael Sammeth, Ernesto Picardi, Graziano Pesole posted to review high-throughput-sequencing by heliopais on 2009-11-30 18:07:24 as along with 14 people and 1 group michaelbarton darian guhjy qm greg dullhunk elipapa burak torfinnnome operon wilbur kshameer renatomilani druvus Journal picks
	Small RNAs and Their Roles in Plant Development [My Copy] Annual Review of Cell and Developmental Biology, Vol. 25, No. 1. (2009), pp. 21-44. by Xuemei Chen posted to small-rna review plants by heliopais on 2009-11-30 17:32:54 as
	Cell Signaling in Space and Time: Where Proteins Come Together and When They're Apart [My Copy] Science In Science, Vol. 326, No. 5957. (27 November 2009), pp. 1220-1224. by John D. Scott, Tony Pawson posted to review cellular_signals by heliopais on 2009-11-30 10:28:00 as along with 4 people and 1 group wilbur cjryan samjlord pablocarb moernerlab
	Subcellular mRNA Localization in Animal Cells and Why It Matters [My Copy] Science, Vol. 326, No. 5957. (27 November 2009), pp. 1212-1216. by Christine E. Holt, Simon L. Bullock posted to review mrna by heliopais on 2009-11-30 10:25:01 as along with 2 people cjryan gbloeb
	Lost in translation: an assessment and perspective for computational microRNA target identification [My Copy] Bioinformatics In Bioinformatics, Vol. 25, No. 23. (29 September 2009), pp. 3049-3055. by Panagiotis Alexiou, Manolis Maragkakis, Giorgos L. Papadopoulos, Martin Reczko, Artemis G. Hatzigeorgiou posted to review microrna_target_prediction microrna by heliopais on 2009-11-19 14:13:47 as along with 19 people and 4 groups renatomilani fstrozzi jperkins jforment hyojinkang apaydin Stew guhjy pattersonee Jporci kintoki dswan dandaman kshameer lwaldron toni_marco frohike lp2 daforerog Orengo Group Journal Picks Bioinformatics Core Service Bioinformatics - CRUK Journal picks
	Insights from genomic profiling of transcription factors [My Copy] Nature Reviews Genetics, Vol. 10, No. 9. (11 August 2009), pp. 605-616. by Peggy J. Farnham posted to transcription_factor_binding_sites transcription_factor review by heliopais on 2009-11-19 12:59:23 as along with 20 people and 2 groups guhjy provero bsamal inesdesantiago fenghezi nklee samanthacooper fpattyn druvus frohike stubrown qayub megraw TRHvidsten mkiyer ericrpaquet ilyashl jbhiatt idonaldson danmaclean Journal picks Chinnaiyan Lab
	The complex eukaryotic transcriptome: unexpected pervasive transcription and novel small RNAs [My Copy] Nature Reviews Genetics, Vol. 10, No. 12. (01 December 2009), pp. 833-844. by Alain Jacquier posted to review high-throughput-sequencing by heliopais on 2009-11-19 12:55:17 as along with 8 people and 2 groups guhjy stajich provero GeeSharpMinor gjuggler frohike qayub megraw Mycology Journal picks
	The challenges of sequencing by synthesis [My Copy] Nature Biotechnology In Nat Biotech, Vol. 27, No. 11. (06 November 2009), pp. 1013-1023. by Carl W. Fuller, Lyle R. Middendorf, Steven A. Benner, et al.George M. Church, Timothy Harris, Xiaohua Huang, Stevan B. Jovanovich, John R. Nelson, Jeffery A. Schloss, David C. Schwartz, Dmitri V. Vezenov posted to review high-throughput-sequencing by heliopais on 2009-11-19 12:31:47 as along with 7 people n00c alexknight viren4388 JonD brianb chvlyl seb1
	How to map billions of short reads onto genomes. [My Copy] Nature biotechnology, Vol. 27, No. 5. (01 May 2009), pp. 455-457. by Cole Trapnell, Steven L. Salzberg posted to review read-mapping high-throughput-sequencing by heliopais on 2009-11-11 09:16:30 as along with 32 people and 5 groups michaelbarton frohike agbiotec burak cthachuk hzoltan tonamswish giovenko jfr torfinnnome daforerog jonilaserson mkiyer Annab darian polivares ghattem kiekyon n00c GeeSharpMinor guhjy nuin reyez orzenil Thaverkamp natstreet druvus fenghezi Stew inesdesantiago idonaldson neils Bioinformatics Chinnaiyan Lab BergmanLab SIMR bioinformatics Bioinformatics - CRUK
	MicroRNAs: small RNAs with a big role in gene regulation [My Copy] Nature Reviews Genetics, Vol. 5, No. 7. (01 July 2004), pp. 522-531. by Lin He, Gregory J. Hannon posted to review microrna by heliopais on 2009-11-05 14:31:04 as along with 8 people and 1 group GeeSharpMinor fishtank vvoorr guhjy jfr dchughes ealloza cerami microRNA
	Is sequencing enlightenment ending the dark age of the transcriptome? [My Copy] Nature Methods, Vol. 6, No. 10. (01 October 2009), pp. 711-713. by Piero Carninci posted to review high-throughput-sequencing by heliopais on 2009-11-03 16:47:30 as along with 5 people inesdesantiago n00c druvus megraw maren
	Next-generation gap [My Copy] Nature Methods, Vol. 6, No. 11s. (15 October 2009), pp. S2-S5. by John D. McPherson posted to review high-throughput-sequencing by heliopais on 2009-11-03 16:44:16 as along with 9 people n00c pst owenlancaster torfinnnome Vincent_Rouilly seb1 idoerg oannes74 GeeSharpMinor
	RNA-Seq—quantitative measurement of expression through massively parallel RNA-sequencing [My Copy] Methods, Vol. 48, No. 3. (29 March 2009), pp. 249-257. by Brian T. Wilhelm, Josette-Renée R. Landry posted to review high-throughput-sequencing by heliopais on 2009-11-03 15:42:12 as along with 11 people darian hzoltan manduca inesdesantiago orzenil n00c woodson8 guhjy tonamswish fenghezi GeeSharpMinor
	Next-generation DNA sequencing techniques [My Copy] New Biotechnology, Vol. 25, No. 4. (03 April 2009), pp. 195-203. by Wilhelm J. Ansorge posted to review high-throughput-sequencing by heliopais on 2009-11-02 13:36:18 as along with 9 people darian manduca inesdesantiago natstreet druvus guhjy n00c svenrahmann ImranRaoufMalik
	Computational methods for discovering structural variation with next-generation sequencing [My Copy] Nature Methods, Vol. 6, No. 11s. (15 October 2009), pp. S13-S20. by Paul Medvedev, Monica Stanciu, Michael Brudno posted to review high-throughput-sequencing by heliopais on 2009-11-02 10:59:24 as along with 17 people and 2 groups seb1 pst owenlancaster robertrentzsch oannes74 toszko kiekyon michaelbarton jasontsai sameersoi druvus GeeSharpMinor Peiyong n00c gdv desany qayub Orengo Group Journal Picks Journal picks
	What would you do if you could sequence everything? [My Copy] Nature Biotechnology, Vol. 26, No. 10. (01 October 2008), pp. 1125-1133. by Avak Kahvejian, John Quackenbush, John F. Thompson posted to review high-throughput-sequencing by heliopais on 2009-11-02 09:44:58 as along with 19 people n00c hzoltan seb1 inesdesantiago stubrown installe Annab jfr Borelli jbhiatt Pascalichouchou bertelsen frohike natstreet druvus reyez alexknight psique GeeSharpMinor
	Next-generation DNA sequencing [My Copy] Nature Biotechnology In Nat Biotech, Vol. 26, No. 10. (09 October 2008), pp. 1135-1145. by Jay Shendure, Hanlee Ji posted to review high-throughput-sequencing by heliopais on 2009-11-02 09:40:16 as along with 49 people and 3 groups tux2000 JamesBarger darian burak Jporci daforerog dchughes hzoltan cthachuk giovenko seb1 installe niallhaslam Vincent_Rouilly rschulz fishtank bluto Annab katholt jmcq michaelbarton n00c jfr dna nzm farhat idoerg mhz mmartin jbhiatt yupu behindtherabbit guhjy Pascalichouchou frohike dakelley ptrobajo zwang Zephyrus psique natstreet druvus nuin alexknight reyez dbk wsjames pengchy GeeSharpMinor Bioinformatics Roswell Cancer Crosstalk Oxford Virology
	Computation for ChIP-seq and RNA-seq studies [My Copy] Nature Methods In Nat Meth, Vol. 6, No. 11s. (15 October 2009), pp. S22-S32. by Shirley Pepke, Barbara Wold, Ali Mortazavi posted to review high-throughput-sequencing by heliopais on 2009-10-30 17:15:59 as along with 27 people and 2 groups humburg fenghezi n00c ongenetics urgi Jporci pst epigenetics timflutre molnet-mna Vincent_Rouilly guhjy cajunsushi mpizbioinfo stubrown hzoltan robertrentzsch xingxu oannes74 tonamswish inesdesantiago Baschl polivares jwfoley druvus GeeSharpMinor chvlyl molnet-macs Orengo Group Journal Picks
	Getting Started in Gene Expression Microarray Analysis [My Copy] PLoS Computational Biology In PLoS Comput Biol, Vol. 5, No. 10. (30 October 2009), e1000543. by Donna K. Slonim, Itai Yanai posted to review microarray by heliopais on 2009-10-30 08:57:50 as along with 11 people and 2 groups csimmons Zephyrus Stew barriot laral inesdesantiago dswan iskathy Fournier34 renatomilani ptrobajo Bioinformatics - CRUK Bioinformatics
	Understanding How miRNAs Post-Transcriptionally Regulate Gene Expression [My Copy] miRNA Regulation of the Translational Machinery In miRNA Regulation of the Translational Machinery (2010), pp. 1-20. by Marc R. Fabian, Thomas R. Sundermeier, Nahum Sonenberg posted to review microrna_modes_of_action microrna by heliopais on 2009-10-29 14:36:23 as along with 1 group microRNA
	New Tricks for Animal MicroRNAs: Targeting of Amino Acid Coding Regions at Conserved and Nonconserved Sites [My Copy] Cancer Research, Vol. 69, No. 8. (15 April 2009), pp. 3245-3248. by Isidore Rigoutsos posted to rna22 review microrna_target_prediction microrna by heliopais on 2009-10-29 09:42:36 as along with 4 people and 1 group tonamswish guhjy samgj daforerog microRNA
	RNA-Seq: a revolutionary tool for transcriptomics [My Copy] Nature Reviews Genetics, Vol. 10, No. 1. (01 January 2009), pp. 57-63. by Zhong Wang, Mark Gerstein, Michael Snyder posted to review high-throughput-sequencing by heliopais on 2009-10-22 17:16:44 as along with 43 people and 1 group bsamal zufar hongkeun_park ngehlenborg hzoltan sandfire maren jwfoley urgi RNA-protein cthachuk GustavoLacerda rdiaz TRHvidsten dswan roys woodson8 jonilaserson gdb n00c ThomasDOtto burak natstreet athma druvus tonamswish fishtank daed JohnBallam jmcq dandaman cassj xingxu idonaldson raiyar inesdesantiago vplagnol jbhiatt giovanni orzenil nuin guhjy GeeSharpMinor CUBES
	Causes and consequences of microRNA dysregulation in cancer [My Copy] Nature Reviews Genetics, Vol. 10, No. 10. (01 October 2009), pp. 704-714. by Carlo M. Croce posted to review microrna cancer by heliopais on 2009-10-22 17:02:04 as along with 10 people and 1 group shazo pattersonee frohike tonamswish valeriehilgers chrisamiller giovenko megraw ealloza misonneh microRNA
	ChIP-seq: advantages and challenges of a maturing technology [My Copy] Nature Reviews Genetics, Vol. 10, No. 10. (08 September 2009), pp. 669-680. by Peter J. Park posted to review high-throughput-sequencing chip-seq by heliopais on 2009-10-22 16:57:05 as along with 25 people and 6 groups guhjy akakak hzoltan dchughes RyuOgawa giovenko inesdesantiago pradiptaray dakelley clearbluespring akundaje rdiaz kimorley leliavski humburg reyez qayub fenghezi tonamswish robertrentzsch polivares idonaldson rschulz cvaldes danmaclean Journal picks Orengo Group Journal Picks JLab BergmanLab CTCF Chromatin
	Exploiting and antagonizing microRNA regulation for therapeutic and experimental applications [My Copy] Nature Reviews Genetics, Vol. 10, No. 8. (01 August 2009), pp. 578-585. by Brian D. Brown, Luigi Naldini posted to review microrna-medical-application microrna by heliopais on 2009-10-22 16:40:19 as along with 5 people and 2 groups guhjy ppgardne reyez misonneh valeriehilgers microRNA Journal picks
	Applications of next-generation sequencing technologies in functional genomics [My Copy] Genomics, Vol. 92, No. 5. (11 November 2008), pp. 255-264. by O. Morozova, M. Marra posted to review high-throughput-sequencing by heliopais on 2009-10-22 16:34:15 as along with 18 people and 2 groups n00c hzoltan viren4388 fishtank jandot lusk natstreet druvus floatingpoint usagi-kirin malcook abizar reyez dchughes xingxu giovenko GeeSharpMinor guhjy Journal picks SIMR bioinformatics
	Bioinformatics challenges of new sequencing technology. [My Copy] Trends in genetics : TIG, Vol. 24, No. 3. (11 February 2008), pp. 142-149. by M. Pop, S. Salzberg posted to review high-throughput-sequencing by heliopais on 2009-10-22 16:31:04 as along with 36 people michaelbarton Jporci cthachuk hzoltan hpaces imaginatio operon daforerog n00c ptrobajo orzenil APRegier katholt kiekyon thegoose2 xingxu floatingpoint polivares yupu treangen jmcq delenickphd giovenko jmeppley dchughes djkt GustavoLacerda niallhaslam urgi Neeperando jfr tharris mariakmejia caseybrown yoonk druvus
	Current-generation high-throughput sequencing: deepening insights into mammalian transcriptomes. [My Copy] Genes and Development In Genes & Development, Vol. 23, No. 12. (15 June 2009), pp. 1379-1386. by Benjamin J. Blencowe, Sidrah Ahmad, Leo J. Lee posted to high-throughput-sequencing review by heliopais on 2009-10-22 16:25:59 as along with 6 people and 1 group n00c cthachuk woodson8 guhjy fenghezi huali SIMR bioinformatics
	Short-Read Sequencing Technologies for Transcriptional Analyses [My Copy] Annual Review of Plant Biology, Vol. 60, No. 1. (9 January 2009), pp. 305-333. by Stacey A. Simon, Jixian Zhai, Raja S. Nandety, et al.Kevin P. McCormick, Jia Zeng, Diego Mejia, Blake C. Meyers posted to high-throughput-sequencing review by heliopais on 2009-10-22 16:21:03 as along with 7 people n00c darian giovenko manduca GeeSharpMinor orzenil abizar
	Next-Generation DNA Sequencing Methods [My Copy] Annual Review of Genomics and Human Genetics, Vol. 9, No. 1. (19 June 2008), pp. 387-402. by Elaine R. Mardis posted to high-throughput-sequencing review by heliopais on 2009-10-22 16:11:44 as along with 16 people darian rshe daforerog stsaft natstreet n00c druvus Vincent_Rouilly Annab floatingpoint yupu LorraineThompson giovenko aheilbut reyez guhjy
	Applications of New Sequencing Technologies for Transcriptome Analysis [My Copy] Annual Review of Genomics and Human Genetics, Vol. 10, No. 1. (2009), pp. 135-151. by Olena Morozova, Martin Hirst, Marco A. Marra posted to high-throughput-sequencing review by heliopais on 2009-10-22 16:03:40 as along with 5 people n00c MarkFiers cthachuk usagi-kirin scmelton
	Regulation of mammalian microRNA processing and function by cellular signaling and subcellular localization [My Copy] Biochimica et Biophysica Acta, Vol. 1779, No. 11. (November 2008), pp. 678-681. by N. Smalheiser posted to review microrna-regulation microrna-post-transcriptional-regulation microrna by heliopais on 2009-10-22 15:48:38 as along with 2 people and 1 group daforerog guhjy microRNA
	Illuminating the silence: understanding the structure and function of small RNAs [My Copy] Nature Reviews Molecular Cell Biology In Nat Rev Mol Cell Biol, Vol. 8, No. 1. (01 January 2007), pp. 23-36. by Tariq M. Rana posted to sirna review microrna by heliopais on 2009-10-22 15:41:52 as along with 7 people and 3 groups puranjoy_b bala tardigrade cdawson LABPERIOBIOLUBC margaritis ealloza microRNA DictyosteliumGroup GIG
	Reconstruction of Arabidopsis thaliana fully integrated small RNA pathway [My Copy] Functional & Integrative Genomics, Vol. 9, No. 4. (1 November 2009), pp. 419-432. by Sadegh Jamalkandi, Ali Masoudi-Nejad posted to review microrna-plant microrna by heliopais on 2009-10-22 13:50:44 as along with 1 person and 1 group thomaskelder microRNA
	Post-transcriptional small RNA pathways in plants: mechanisms and regulations [My Copy] Genes and Development, Vol. 20, No. 7. (1 April 2006), pp. 759-771. by Herve Vaucheret posted to small-rna review microrna-plant microrna by heliopais on 2009-10-21 14:20:21 as along with 4 people and 2 groups galka8_diploma cdawson dandaman RobinHarr microRNA GIG
	MicroRNA biogenesis: coordinated cropping and dicing [My Copy] Nature Reviews Molecular Cell Biology, Vol. 6, No. 5. (01 May 2005), pp. 376-385. by V. Narry Kim posted to review microrna-biogenesis microrna by heliopais on 2009-10-20 18:13:07 as along with 3 people and 2 groups vvoorr dchughes cdawson microRNA GIG
	Regulating the regulators: mechanisms controlling the maturation of microRNAs [My Copy] Trends in Biotechnology, Vol. 27, No. 1. (13 January 2009), pp. 27-36. by X. Ding, J. Weiler, H. Groshans posted to review microrna-regulation microrna-post-transcriptional-regulation microrna by heliopais on 2009-10-20 12:47:39 as along with 3 people and 1 group guhjy valeriehilgers pengchy microRNA
	Lessons from microRNA mutants in worms, flies and mice. [My Copy] Cell Cycle, Vol. 7, No. 16. (15 August 2008), pp. 2500-2508. by Peter Smibert, Eric C. Lai posted to review microrna by heliopais on 2009-10-20 11:26:22 as along with 1 person and 1 group valeriehilgers microRNA
	MicroRNAs in the Hox network: an apparent link to posterior prevalence [My Copy] Nature Reviews Genetics, Vol. 9, No. 10. (01 October 2008), pp. 789-796. by Soraya Yekta, Clifford J. Tabin, David P. Bartel posted to review microrna hox by heliopais on 2009-10-20 10:59:38 as along with 1 group microRNA
	Origin, Biogenesis, and Activity of Plant MicroRNAs [My Copy] Cell, Vol. 136, No. 4. (20 February 2009), pp. 669-687. by Olivier Voinnet posted to microrna-plant review microrna-biogenesis microrna by heliopais on 2009-10-19 16:54:34 as along with 4 people and 1 group natstreet druvus QuananHu valeriehilgers microRNA
	Robustness: mechanisms and consequences [My Copy] Trends in Genetics, Vol. 25, No. 9. (28 September 2009), pp. 395-403. by Joanna Masel, Mark L. Siegal posted to robustness review by heliopais on 2009-10-19 15:58:12 as along with 4 people joebilkobailey abhishek_tiwari qwermish brembs
	The let-7 family of microRNAs [My Copy] Trends in Cell Biology, Vol. 18, No. 10. (1 October 2008), pp. 505-516. by S. Roush, F. Slack posted to review microrna let-7 by heliopais on 2009-10-19 09:55:01 as along with 2 people and 1 group guhjy valeriehilgers microRNA
	MicroRNAs tell an evo-devo story [My Copy] Nature Reviews Neuroscience, Vol. 10, No. 10. (09 September 2009), pp. 754-759. by Kenneth S. Kosik posted to review microrna evolution evo-devo cns by heliopais on 2009-10-15 15:49:01 as along with 4 people and 1 group aaltenburger valeriehilgers roys dchughes microRNA
	The Biogenesis and Function of PIWI Proteins and piRNAs: Progress and Prospect [My Copy] Annual Review of Cell and Developmental Biology, Vol. 25, No. 1. (1 October 2009), pp. 355-376. by Travis Thomson, Haifan Lin posted to review piwi pirna by heliopais on 2009-10-09 16:06:59 as along with 1 person tonamswish
	Occludin and claudins in tight-junction strands: leading or supporting players? [My Copy] Trends in Cell Biology, Vol. 9, No. 7. (1 July 1999), pp. 268-273. by S. Tsukita posted to review occludin claudin cell-cell-adhesion by heliopais on 2009-10-08 09:28:12 as
	Comparative study of gene set enrichment methods [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 275. by Luca Abatangelo, Rosalia Maglietta, Angela Distaso, et al.Annarita D'Addabbo, Teresa Creanza, Sayan Mukherjee, Nicola Ancona posted to review gene_sets by heliopais on 2009-09-11 17:36:28 as along with 10 people shikin dswan zufar fpattyn pengchy rdiaz daforerog arjun_citeulike barriot druvus
	A Quick Guide to Organizing Computational Biology Projects [My Copy] PLoS Computational Biology In PLoS Comput Biol, Vol. 5, No. 7. (31 July 2009), e1000424. by William S. Noble posted to computational_biology organization review by heliopais on 2009-08-10 23:26:02 as along with 73 people and 8 groups songpku shikin kemamy2 chvlyl freesci dfdong dutilh leliavski dgront paulymer rvosa installe burak annakcroft brianb nuin skembel pekrau Sergey_gerbek mordiano remoteFuture Yanno aaltenburger marekrud guhjy dolchan frohike operon CorinYeats artaban421 antonkratz tomhebbron maren bayesian daveGerrard JoeBanks jcaddy somak bertelsen ptrobajo nperoni daforerog mmwoodman charris5 GustavoLacerda pmendes fgibson rdiaz Zephyrus franklu310 lmichan silberbauer leemond31 jlangdon robfsouza Stew pmung reyez kshameer djkt pawelsobko jjray dswan apaydin renatomilani VGreiff cabbagesofdoom wei_tang fenghezi cisevol barry sdaehne druvus FAB-lab Pedro Martinez EvoDevo lab Barcelona Orengo Group Journal Picks Bioinformatics - CRUK ccsbs BergmanLab structural_bioinformatics McCammon

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microrna	643
microarray	138
review	117
high-throughput-sequencing	107
microrna_target_prediction	91
microrna-biogenesis	59
genetic_regulatory_network	44
transcription_factor	44
evolution	35
gene_sets	35
microrna_microarray	33
grn	33
microrna_expression	32
microrna_gene_finding	32
microrna-regulation	30
database	26
microrna_modes_of_action	22
network_inference	22
argonaute	21
read-mapping	21
microrna-plant	21
motif_finding	20
sirna	19
rna_secondary_structure	19
differential_expression	17
mir-206	16
probesets	16
dicer	16
cancer	16
networks	15
microrna_target	14
microrna-networks	14
rna	13
chondrocyte	13
microrna-post-transcriptional-regulation	13
gene_ontology	13
polya	12
rna_silencing	12
smad	11
myo-mir	11
tgf-beta	11
let-7	11
solexa	10
microrna_target_architecture	10
mir-1	10
bone_formation	9
non_coding_rna	9
microarray_normalization	8
microrna-transcriptional-regulation	8
drosha	8
bacteria	8
microrna_mrna	8
evolutionary_dynamics	8
illumina	8
small-rna	8
normalization	7
microrna_transcription	7
statistics	7
argonaute_loading	7
genetic_regulation	7
bmp2	6
risc_precipitation	6
tools	6
expressionvalues	6
affymetrix	6
cxcl12	6
gene_regulation	6
microrna_activation	6
genomics	6
c_elegans	5
pseudoknot	5
mirna	5
enhancer	5
cartilage	5
binding_site_prediction	5
book	5
dgcr8	5
myo-mirs	5
sequence-alignement	5
barcodes	5
rna-seq	4
r	4
drosophila	4
breast_cancer	4
transcription	4
cartilage_and_bone	4
annotation	4
cross_platform	4
c2c12	4
mir-140	4
chicken_microrna	4
microrna-mathematical-model	4
srf	4
rna22	4
software	4
microarray_functional_analysis	4
lin-28	4
benchmark	4
strand-selection	4
microrna_silac	4
error-correction	4
utr	4
isomir	4
mir-133	4
newsandviews	4
exportin-5	4
mir-449	3
genmir	3
antimicrorna	3
rnai	3
pirna	3
human	3
mir-122	3
risc-ip	3
rna_secondary_structure_prediction	3
stem-cell	3
transcription_factor_binding_sites	3
lin-4	3
snp	3
gene_expression	3
alignment	3
bantam	3
runx2	3
microrna-network	3
barcode_design	3
mir-124	3
target_prediction	3
non_coding_dna	3
454	3
functional_genomics	3
plants	3
target_architecture	2
hypoxia	2
data-sharing	2
socio_biology	2
worm	2
commentary	2
microrna-expression	2
e2f1	2
chemokine	2
zebrafish	2
microrna-instability	2
mir-24	2
mir-200	2
myc	2
regulatory_elements	2
microprocessor	2
mrna-profiling	2
au_rich_elements	2
prisoners_dilemma	2
mir-14	2
functional_annotation	2
mrna	2
microrna-target	2
solid	2
mir-210	2
limma	2
hand2	2
bone	2
sox	2
mir-17	2
risc	2
translation	2
genome	2
microrrna	2
microrna-location	2
p-bodies	2
12_drosophila	2
stress-response	2
pre-mirna	2
heart	2
microrna_discovery	2
chip-seq	2
microrna_profiling	2
il-1	2
mir-155	2
microarray_detection	2
circadian-clock	2
cow	2
sequencing_technologies	2
gene_regulatory_networks	2
secondary_targets	2
dicer-knockout	2
microrna-microarray	2
feedback_loop	2
mir-92	2
frog	2
pasha	2
microarray_inference	2
anti-sense-microrna	2
bayesian_network	2
microrna_kinetic_model	2
single-cell	2
feedback	1
gpu	1
microrna-mrna-profiling	1
promoters	1
histone	1
cellular_signals	1
biochemistry	1
hyl1	1
rnaalifold	1
planarians	1
arraymining	1
delta_notch	1
platypus	1
stochastic_model	1
microrna-localization	1
clustering	1
probabilistic_model	1
quality_control_system	1
pca	1
microbiome	1
fibroblast	1
obesity	1
mir-23	1
methylation	1
lumi	1
tarbp2	1
herpes	1
piwi	1
mirexpress	1
ruby_programming	1
micrornra	1
science_divulgation	1
molecular-dynamics	1
bioinformatics_and_computational_biology	1
loess	1
rma-seq	1
hox	1
mirna_biogenesis	1
edger	1
target-in-orf	1
crystal_structures	1
mir-31	1
text_mining	1
lasker_foundation	1
mapk	1
hdac	1
mouse	1
go	1
gsea	1
cell-reprogramming	1
mir-125	1
b_mori	1
digital_gene_expression	1
hematopoiesis	1
regulatory_network	1
occludin	1
reputation	1
mir-9	1
isoforms	1
micorna-post-transcriptional-regulation	1
sequence-visualization	1
short-rea-archive	1
reporter_systems	1
chordate	1
computational_biology	1
cns	1
sylamer	1
false_discovery_rate	1
bmp-6	1
wnt	1
rhob	1
rma	1
omics	1
shrimp	1
permutation_tests	1
provisional	1
microrarray	1
genome_browser	1
pita	1
microrna-medical-application	1
organization	1
erk	1
mir-199	1
microrna-offset	1
epigenetics	1
immunology	1
myogenesis	1
fly	1
biography	1
mir-143	1
mir-126	1
fdr	1
robustness	1
modelling	1
bibliographic_information	1
bayesian	1
editorial	1
heat_shock	1
bibliometrics	1
dnasudoku	1
medicago_truncatula	1
sample-preparation	1
transmir	1
mir-223	1
compmoby	1
microrna-turnover	1
gene_finding	1
ten_simple_rules	1
fox	1
nanopore-sequencing	1
blast	1
hasty	1
bead-chip	1
mirbase	1
self_organizing_map	1
microblogging	1
claudin	1
target-mimics	1
small_rna_sequencing	1
e2f	1
fastq	1
mir-146	1
hts-application	1
patman	1
emt	1
cell-cell-adhesion	1
micorrna_networks	1
e2f2	1
pig	1
starmir	1
r2d2	1
tnrc6	1
mir-1975	1
enrichment	1
targetminer	1
mirdb	1
synthetic_biology	1
risc-availability	1
qirna	1
pri-mirna	1
shrec	1
model_checking	1
mir-26	1
targetscan	1
information_theory	1
antagomir	1
nuclear_export	1
time_series	1
latex	1
immunoprecipitation	1
microrna_clusters	1
mir-499	1
alternative-splicing	1
microrna_ko	1
shp	1
mir-1979	1
base-calling	1
pap	1
sequence_context	1
bioprospector	1
mir-145	1
rits	1
language	1
microrna_structure	1
notch3	1
science_fiction	1
t_cell_development	1
chicken	1
lsy-6	1
regulation	1
sox9	1
microrna-human-specific	1
mir-21	1
random_set	1
osteogenesis	1
affyprobeminer	1
ef2c	1
swift	1
deamination	1
microrna-genomics	1
gw182	1
pdgf	1
drosohila	1
hcv_infection	1
synthetic-sample	1
chondrogenesis	1
web_tools	1
chlamydomonas	1
microna_microarray	1
pr_domain	1
hits-clip	1
evo-devo	1
embryonic_growth	1
reduce	1
connexin43	1
rna-binding-protein	1
sfold	1
osteoblast	1
bio_complexity	1
mir-181	1
core_tf	1
human_mobility	1
open_science	1
trna	1
mir-34	1
c3h10t12	1
cdk	1
bonferroni_adjustments	1
msc	1
mir-208	1
systems_biology	1
transcript-quantification	1
transposable_elements	1
indirect_reciprocity	1
estrogen	1
impact_factor	1
leukemia	1

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