hpaces's ht_sequencing [21 articles] Export

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	Managing and Analyzing Next-Generation Sequence Data [My Copy] PLoS computational biology In PLoS Comput Biol, Vol. 5, No. 6. (26 June 2009), e1000369. posted to ht_sequencing bioinformatics 2009 by hpaces on 2009-11-08 09:38:24 as along with 48 people and 4 groups Jporci kevinemamy heliopais jforment jfr burak idoerg Geknitics cthachuk hzoltan chvlyl sameersoi gdv GeeSharpMinor idonaldson darian daveGerrard tharris Yanno inesdesantiago jcaddy agbiotec humburg Zephyrus daforerog stubrown GustavoLacerda torfinnnome natstreet polivares orzenil kongl guhjy druvus n00c leemond31 nuin operon jasontsai jmeppley rdiaz michaelbarton dswan reyez kshameer TRHvidsten djkt ppgardne Bioinformatics Core Service BergmanLab Bioinformatics Journal picks
	Bioinformatics challenges of new sequencing technology [My Copy] Trends in Genetics, Vol. 24, No. 3. (11 February 2008), pp. 142-149. by M. Pop, S. Salzberg posted to review ht_sequencing bioinformatics 2008 by hpaces on 2009-11-08 09:37:37 as along with 36 people Jporci cthachuk hzoltan heliopais imaginatio operon daforerog n00c ptrobajo orzenil APRegier katholt michaelbarton kiekyon thegoose2 xingxu floatingpoint polivares yupu treangen jmcq delenickphd giovenko jmeppley dchughes djkt GustavoLacerda niallhaslam urgi Neeperando jfr tharris mariakmejia caseybrown yoonk druvus
	A consistency-based consensus algorithm for de novo and reference-guided sequence assembly of short reads [My Copy] Bioinformatics, Vol. 25, No. 9. (1 May 2009), pp. 1118-1124. by Tobias Rausch, Sergey Koren, Gennady Denisov, et al.David Weese, Anne-Katrin Emde, Andreas Doring, Knut Reinert posted to 2009 algorithm assembly ht_sequencing software solexa by hpaces on 2009-04-24 11:53:30 as along with 20 people and 2 groups humburg jfr azazello hzoltan cthachuk GustavoLacerda jasontsai n00c nuin dakelley skembel Thaverkamp reyez TRHvidsten djkt APRegier pengchy natstreet druvus darian iSEEM Bioinformatics
	SOAP: short oligonucleotide alignment program [My Copy] Bioinformatics, Vol. 24, No. 5. (1 March 2008), pp. 713-714. by Ruiqiang Li, Yingrui Li, Karsten Kristiansen, Jun Wang posted to 2008 alignment assembly bioinformatics ht_sequencing software solexa by hpaces on 2009-04-17 11:08:03 as along with 27 people humburg cthachuk hzoltan antonkratz adijr jmanning2k pachorip jmcq jsatkosk jasontsai n00c skembel maren natstreet druvus orzenil pengchy umit guhjy ghattem GustavoLacerda niallhaslam mdimon caseybrown urgi bozdagd waszak
	Application of 'next-generation' sequencing technologies to microbial genetics [My Copy] Nat Rev Micro, Vol. advanced online publication, No. 4. (23 February 2009), pp. 287-296. by Daniel Maclean, Jonathan D. G. Jones, David J. Studholme posted to 2009 454 annotation assembly ht_sequencing review solexa by hpaces on 2009-04-16 15:19:25 as along with 9 people and 1 group nfparrish n00c kinestetika katholt jlgreen roys robsyme druvus jmeppley iSEEM
	Short read fragment assembly of bacterial genomes [My Copy] Genome Research, Vol. 18, No. 2. (1 February 2008), pp. 324-330. by Mark J. Chaisson, Pavel A. Pevzner posted to 2007 454 algorithm assembly ht_sequencing sequencing software solexa by hpaces on 2009-04-10 08:52:33 as along with 17 people n00c pachorip APRegier thegoose2 dakelley Neeperando idoerg druvus jasontsai acn orzenil azazello GustavoLacerda dandaman caseybrown iris42 tharris
	Gene discovery and annotation using LCM-454 transcriptome sequencing. [My Copy] Genome Res, Vol. 17, No. 1. (January 2007), pp. 69-73. by S. J. Emrich, W. B. Barbazuk, L. Li, P. S. Schnable posted to 2007 454 annotation ht_sequencing metagenomics software by hpaces on 2009-04-05 12:21:35 as along with 8 people malcook orzenil guhjy operon plofje usagi-kirin ghattem semrich
	Next-generation DNA sequencing of paired-end tags (PET) for transcriptome and genome analyses [My Copy] Genome Research, Vol. 19, No. 4. (April 2009), pp. 521-532. by Melissa J. Fullwood, Chia L. Wei, Edison T. Liu, Yijun Ruan posted to 2009 454 annotation genome_organisation ht_sequencing solexa by hpaces on 2009-04-05 10:32:45 as along with 20 people and 1 group n00c hzoltan cthachuk GustavoLacerda jandot inesdesantiago mkiyer rschulz guhjy lp2 natstreet druvus absterga coela orzenil idoerg behindtherabbit nuin djkt jbhiatt Chinnaiyan Lab
	Viral population estimation using pyrosequencing. [My Copy] PLoS computational biology, Vol. 4, No. 4. (9 April 2008), e1000074. by N. Eriksson, L. Pachter, Y. Mitsuya, et al.S. Y. Rhee, C. Wang, B. Gharizadeh, M. Ronaghi, R. W. Shafer, N. Beerenwinkel posted to 2008 454 bioinformatics ht_sequencing metagenomics virus by hpaces on 2009-04-05 10:29:25 as along with 6 people and 2 groups nfparrish ghattem jonilaserson jmeppley bmaust djkt SIMR bioinformatics iSEEM
	Paired-End Mapping Reveals Extensive Structural Variation in the Human Genome [My Copy] Science In Science, Vol. 318, No. 5849. (19 September 2007), pp. 420-426. by Jan O. O. Korbel, Alexander, Jason P. P. Affourtit, et al.Brian Godwin, Fabian Grubert, Jan, Philip M. M. Kim, Dean Palejev, Nicholas J. J. Carriero, Lei Du, Bruce E. E. Taillon, Zhoutao Chen, Andrea Tanzer, Eugenia, Jianxiang Chi, Fengtang Yang, Nigel P. P. Carter, Matthew E. E. Hurles, Sherman M. M. Weissman, Timothy T. T. Harkins, Mark B. B. Gerstein, Michael Egholm, Michael Snyder posted to 2007 454 genome genome_organisation ht_sequencing human by hpaces on 2009-04-05 10:26:30 as along with 22 people and 2 groups torfinnnome jandot n00c jonilaserson jrvalcourt APRegier jessopher Zephyrus pkonings orzenil stuetz matthewsuderman dpollard dchughes AaronDarling rdiaz giovanni jlangdon annacarina07 Neeperando jfr caseybrown Journal picks EisenLab
	Velvet: Algorithms for de novo short read assembly using de Bruijn graphs [My Copy] Genome Research In Genome Research, Vol. 18, No. 5. (18 March 2008), pp. 821-829. by Daniel Zerbino, Ewan Birney posted to 2008 algorithm alignment assembly bioinformatics computational ht_sequencing by hpaces on 2009-03-24 15:55:33 as along with 43 people and 3 groups humburg ajsferreira vplagnol bedo jwhitney cthachuk hzoltan azazello ajbattle jmanning2k n00c carlk pachorip APRegier jbhiatt jonilaserson operon jahwa jsatkosk sandfire thegoose2 katholt robsyme djkt AaronDarling mhz idoerg jmcq dswan dakelley jasontsai acn druvus natstreet nmohelli stajich farhat iris42 tharris Neeperando sharpton GustavoLacerda gdb Bioinformatics DeNovoAssembly-SIMR Mycology
	Ultrafast and memory-efficient alignment of short DNA sequences to the human genome [My Copy] Genome Biology, Vol. 10, No. 3. (2009), R25. by Ben Langmead, Cole Trapnell, Mihai Pop, Steven Salzberg posted to 2009 alignment ht_sequencing sequencing software by hpaces on 2009-03-16 10:07:03 as along with 39 people and 4 groups oannes mijam nuin jfr hzoltan cthachuk darshan fstrozzi adijr debasis bozdagd polivares torfinnnome n00c talponer jmcq rschulz ghattem operon humburg idonaldson mmartin skembel dquest heliopais djkt GeeSharpMinor bertelsen darian semrich dakelley idoerg vmsr admash pdexheimer mhamada fpattyn natstreet druvus BergmanLab SIMR bioinformatics iSEEM Notre Dame Bioinformatics
	De novo assembly using low-coverage short read sequence data from the rice pathogen Pseudomonas syringae pv. oryzae [My Copy] Genome research In Genome Research, Vol. 19, No. 2. (17 November 2009), pp. 294-305. by Josephine A. A. Reinhardt, David A. A. Baltrus, Marc T. T. Nishimura, William R. R. Jeck, Corbin D. D. Jones, Jeffery R. R. Dangl posted to 2008 454 assembly bacteria ht_sequencing by hpaces on 2008-11-21 09:46:47 as along with 15 people and 2 groups darian n00c michaelbarton pachorip ThomasDOtto robsyme orzenil AaronDarling druvus dakelley Huub_odc usagi-kirin abizar acn jbhiatt SIMR bioinformatics Bioinformatics
	Sequencing the nuclear genome of the extinct woolly mammoth [My Copy] Nature, Vol. 456, No. 7220. (20 November 2008), pp. 387-390. by Webb Miller, Daniela I. Drautz, Aakrosh Ratan, et al.Barbara Pusey, Ji Qi, Arthur M. Lesk, Lynn P. Tomsho, Michael D. Packard, Fangqing Zhao, Andrei Sher, Alexei Tikhonov, Brian Raney, Nick Patterson, Kerstin L. Toh, Eric S. Lander, James R. Knight, Gerard P. Irzyk, Karin M. Fredrikson, Timothy T. Harkins, Sharon Sheridan, Tom Pringle, Stephan C. Schuster posted to 2008 454 ancient_dna genomics ht_sequencing by hpaces on 2008-11-20 15:03:27 as along with 13 people aprasad kiekyon katanaT usagi-kirin operon reyez EsepBib treangen xianjun neils djkt jbhiatt caseybrown
	A Metagenomic Survey of Microbes in Honey Bee Colony Collapse Disorder. [My Copy] Science (6 September 2007) by Diana, Sean Conlan, Edward C. C. Holmes, et al.Gustavo Palacios, Jay D. D. Evans, Nancy A. A. Moran, Phenix, Thomas Briese, Mady Hornig, David M. M. Geiser, Vince Martinson, Dennis Vanengelsdorp, Abby L. L. Kalkstein, Andrew Drysdale, Jeffrey Hui, Junhui Zhai, Liwang Cui, Stephen K. K. Hutchison, Jan, Michael Egholm, Jeffery S. S. Pettis, Ian posted to 2007 454 ht_sequencing metagenomics by hpaces on 2008-07-29 16:36:10 as along with 9 people and 3 groups pauldobson GustavoLacerda azazello jmeppley bluto carpi mellabee jlgreen sconlan Bioinformatics Green Lab iSEEM
	MEGAN analysis of metagenomic data [My Copy] Genome Research, Vol. 17, No. 3. (06 March 2007), pp. 377-386. by D. H. Huson, A. F. Auch, J. Qi, S. C. Schuster posted to 2007 bioinformatics ht_sequencing metagenomics phylogeny software by hpaces on 2008-07-29 16:07:03 as along with 15 people and 2 groups ajsferreira taylor73 esyoun dakelley Thaverkamp druvus idoerg guhjy treangen jmeppley azazello wenhan carpi alexl mjetten anammox microbiology_nijmegen
	Microbial population structures in the deep marine biosphere. [My Copy] Science (New York, N.Y.), Vol. 318, No. 5847. (5 October 2007), pp. 97-100. by Julie A. Huber, David B. Welch, Hilary G. Morrison, et al.Susan M. Huse, Phillip R. Neal, David A. Butterfield, Mitchell L. Sogin posted to 16s_rrna 2007 454 ht_sequencing metagenomics phylogeny by hpaces on 2008-07-29 16:02:33 as along with 8 people and 3 groups inquil madhadron djkt mblwhoi stajich kinestetika mellabee Fabnot microbiology_nijmegen Papers recommended by the Roscoff Plankton Group iSEEM
	Metagenomic analysis of the microbial community associated with the coral Porites astreoides [My Copy] Environmental Microbiology, Vol. 0, No. 0. (0000), pp. ???-???. by Linda Wegley, Robert Edwards, Beltran R. Brito, Hong Liu, Forest Rohwer posted to 2007 454 ht_sequencing marine metagenomics by hpaces on 2008-07-29 15:49:44 as along with 2 people bluto vrich
	Diversity of microRNAs in human and chimpanzee brain [My Copy] Nature Genetics, Vol. 38, No. 12. (29 October 2006), pp. 1375-1377. by Eugene Berezikov, Fritz Thuemmler, Linda W. W. van Laake, et al.Ivanela Kondova, Ronald Bontrop, Edwin Cuppen, Ronald H. A. H. Plasterk posted to 2006 chimp comparative_genomics ht_sequencing human mirna by hpaces on 2008-07-16 08:03:34 as along with 7 people and 2 groups gdb andersbj mtagaya ealloza erbon heliopais maralena microRNA BioinfoCIPF
	The new paradigm of flow cell sequencing [My Copy] Genome Research, Vol. 18, No. 6. (1 June 2008), pp. 839-846. by Robert A. Holt, Steven J. Jones posted to 2008 ht_sequencing review by hpaces on 2008-07-02 08:58:19 as along with 18 people and 1 group n00c mtagaya thegoose2 idoerg treangen druvus kintoki tmmurali stajich reyez lp2 GustavoLacerda tharris balicea caseybrown dchughes serdarbozdag jfr Mycology
	The impact of next-generation sequencing technology on genetics [My Copy] Trends in Genetics, Vol. 24, No. 3. (11 February 2008), pp. 133-141. by Elaine R. Mardis posted to 2008 ht_sequencing method review by hpaces on 2008-07-02 08:10:33 as along with 24 people and 2 groups rshe jasontsai n00c kiekyon jessopher daforerog psique idoerg jameswasmuth floatingpoint brdwilde neils jmcq jbsaltz guhjy dchughes djkt niallhaslam urgi zerojinx jlgreen cybaer1 giovenko druvus Green Lab iSEEM

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2007	72
bioinformatics	68
algorithm	35
2008	35
software	29
comparative_genomics	28
human	28
genome	27
review	25
evolution	22
ht_sequencing	21
bacteria	20
454	17
phylogeny	16
2006	16
genomics	16
metagenomics	16
2009	15
chimp	12
alignment	10
retroelement	10
assembly	9
annotation	8
2004	7
my	7
genome_organisation	7
computational	7
database	7
array	7
mirna	6
sequencing	6
networks	5
eukaryotic	5
clustering	5
multiple_alignment	5
hmm	5
solexa	5
gene_organisation	4
horizontal_transfer	4
protein	4
2002	4
prediction	4
endogenous_retrovirus	4
regulation	4
lectures	3
function	3
herv	3
method	2
virus	2
ortholog	2
structure	2
vertebrate	2
gene_expression_array	2
bayesian	2
ancient_dna	2
mammal	2
yeast	2
drosophila	2
curiosity	2
2005	2
primate	2
gene_regulation	2
visualisation	2
comment	2
synsytin	2
1997	2
cancer	1
gene_prediction	1
similarity	1
disease	1
line	1
chromatin	1
literature	1
insect	1
mouse	1
coevolution	1
2001	1
16s_rrna	1
statistics	1
protein_protein_interaction	1
nomenclature	1
nash	1
blast	1
2003	1
neandertal	1
plant	1
cat	1
ontology	1
marine	1
development	1
motif	1
genetic_algorithm	1
1996	1
1993	1

hpaces's ht_sequencing [21 articles] Export

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