humburg's library 177 articles Export

	Measuring classifier performance: a coherent alternative to the area under the ROC curve [My Copy] Machine Learning, Vol. 77, No. 1. (1 October 2009), pp. 103-123. by David Hand posted to roc_curve objective classifiers auc by humburg on 2009-10-19 23:23:39 as along with 3 people and 1 group gotgenes neils abrentnall QFRMC_ConsumerCredit
	Robust estimators for expression analysis [My Copy] Bioinformatics, Vol. 18, No. 12. (1 December 2002), pp. 1585-1592. by Earl Hubbell, Wei-Min Liu, Rui Mei posted to normalization microarray by humburg on 2009-10-12 05:40:59 as along with 7 people and 1 group bertelsen lawraga VGreiff vertikalist GeeSharpMinor jfr wirawan BTS-PT-AS-CS
	Basic local alignment search tool. [My Copy] Journal of molecular biology, Vol. 215, No. 3. (5 October 1990), pp. 403-410. by S. F. Altschul, W. Gish, W. Miller, E. W. Myers, D. J. Lipman posted to tool sequence-alignment by humburg on 2009-09-23 01:03:38 as along with 77 people and 6 groups VGreiff richter80 krapnik azazello rshe mtaschuk sjcockell niallhaslam djohnson thegoose timhubbard pachorip n00c maria_hauser rpetrenko parnell yylin esyoun APRegier idoerg Neeperando robert85 thegoose2 daforerog mcbla coela alessandroparini bertelsen Blackbeard florisbuijzen laurabailey treangen pwais mmartin tharris dmp camster davidng evaf dragonrez jwm jmeppley Ayest RMGraze ea yas balajis alexg indigoviolet moborg arcticrasta dullhunk dgront caporaso michC myui BioNica CitoJam rabio timflutre lusk cjeans incovoma beatrizfernandez wenhan jtomasch GustavoLacerda sgoetz siebertm ichbins81 jofiel Thaverkamp shung marti ashaytan benwei granujilla C. elegans / WormBase dbk-lab EisenLab T_lab biomedical-nlp Microbial-Ecology
	Vernalization requires epigenetic silencing of FLC by histone methylation [My Copy] Nature, Vol. 427, No. 6970. (08 January 2004), pp. 164-167. by Ruth Bastow, Joshua S. Mylne, Clare Lister, Zachary Lippman, Robert A. Martienssen, Caroline Dean posted to epigenetics chromatin-structure arabidopsis by humburg on 2009-09-22 05:24:34 as along with 1 person Happybene
	Genome-wide analysis of Polycomb targets in Drosophila melanogaster [My Copy] Nature Genetics, Vol. 38, No. 6. (28 May 2006), pp. 700-705. by Yuri B. Schwartz, Tatyana G. Kahn, David A. Nix, et al.Xiao-Yong Li, Richard Bourgon, Mark Biggin, Vincenzo Pirrotta posted to chromatin-structure by humburg on 2009-09-22 05:12:05 as along with 5 people farhat caseybrown RMGraze eukfn elzodw
	Polycomb complexes repress developmental regulators in murine embryonic stem cells [My Copy] Nature, Vol. 441, No. 7091. (19 April 2006), pp. 349-353. by Laurie A. Boyer, Kathrin Plath, Julia Zeitlinger, et al.Tobias Brambrink, Lea A. Medeiros, Tong I. Lee, Stuart S. Levine, Marius Wernig, Adriana Tajonar, Mridula K. Ray, George W. Bell, Arie P. Otte, Miguel Vidal, David K. Gifford, Richard A. Young, Rudolf Jaenisch posted to chromatin-structure by humburg on 2009-09-22 05:09:42 as along with 5 people and 1 group tuck cconboy nickluscombe eukfn inesdesantiago EBI-regulation
	BayesPeak: Bayesian analysis of ChIP-seq data [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 299. by Christiana Spyrou, Rory Stark, Andy Lynch, Simon Tavare posted to tf hmm high-throughput-sequencing chromatin-structure algorithm by humburg on 2009-09-22 03:36:52 as along with 11 people and 4 groups Vincent_Rouilly tonamswish dswan fenghezi inesdesantiago idonaldson polivares mkiyer druvus stajich rschulz Bioinformatics JLab BergmanLab Mycology
	ChIP-seq: advantages and challenges of a maturing technology [My Copy] Nature Reviews Genetics, Vol. 10, No. 10. (08 September 2009), pp. 669-680. by Peter J. Park posted to tf nucleosomes high-throughput-sequencing chromatin-structure chip-seq by humburg on 2009-09-20 02:56:16 as along with 23 people and 6 groups hzoltan dchughes RyuOgawa heliopais giovenko inesdesantiago pradiptaray dakelley clearbluespring akundaje rdiaz kimorley leliavski reyez qayub fenghezi tonamswish robertrentzsch polivares idonaldson rschulz cvaldes danmaclean Journal picks Orengo Group Journal Picks JLab BergmanLab CTCF Chromatin
	Bioconductor: Open software development for computational biology and bioinformatics [My Copy] Genome Biology, Vol. 5 (2004), R80. by Robert C. Gentleman, Vincent J. Carey, Douglas M. Bates, et al.Ben Bolstad, Marcel Dettling, Sandrine Dudoit, Byron E. And, Laurent Gautier, Yongchao Ge, Jeff Gentry, Kurt Hornik, Torsten Hothorn, Wolfgang Huber, Stefano Iacus, Rafael Irizarry, Friedrich Leisch, Cheng Li, Martin Maechler, Anthony J. Rossini, Gunther Sawitzki, Colin Smith, Gordon Smyth, Luke Tierney, Jean Y. H. Yang, Jianhua Zhang posted to software-development bioinformatics by humburg on 2009-09-19 02:10:50 as
	Managing and analyzing next-generation sequence data. [My Copy] PLoS computational biology, Vol. 5, No. 6. (26 June 2009), e1000369. by Brent G. Richter, David P. Sexton posted to high-throughput-sequencing by humburg on 2009-09-18 07:42:08 as along with 41 people and 3 groups Geknitics cthachuk hzoltan chvlyl sameersoi hpaces gdv GeeSharpMinor idonaldson darian daveGerrard tharris Yanno inesdesantiago jcaddy agbiotec Zephyrus daforerog stubrown GustavoLacerda torfinnnome natstreet polivares orzenil kongl guhjy druvus n00c leemond31 nuin operon jasontsai jmeppley rdiaz michaelbarton dswan reyez kshameer TRHvidsten djkt ppgardne BergmanLab Bioinformatics Journal picks
	A Model Based Background Adjustment for Oligonucleotide Expression Arrays [My Copy] Johns Hopkins University, Dept. of Biostatistics Working Papers (May 2004), paper 1. by Zhijin Wu, Rafael A. Irizarry, Robert Gentleman, Francisco M. Murillo, Forrest Spencer posted to normalization microarray by humburg on 2009-09-17 02:11:46 as along with 1 person Dax42
	A barrier nucleosome model for statistical positioning of nucleosomes throughout the yeast genome [My Copy] Genome Research, Vol. 18, No. 7. (12 July 2008), pp. 1073-1083. by Travis N. Mavrich, Ilya P. Ioshikhes, Bryan J. Venters, et al.Cizhong Jiang, Lynn P. Tomsho, Ji Qi, Stephan C. Schuster, Istvan Albert, B. Franklin Pugh posted to nucleosomes high-throughput-sequencing chromatin-structure chip-seq by humburg on 2009-09-10 23:31:09 as along with 7 people hagechouchin443 talponer siebert sonjadaniela vega aalibes gdb
	ChIP-chip: Data, Model, and Analysis [My Copy] Biometrics, Vol. 63, No. 3. (September 2007), pp. 787-796. by Ming Zheng, Leah O. Barrera, Bing Ren, Ying N. Wu posted to tiling-array tf microarray chip-chip algorithm by humburg on 2009-09-10 08:07:10 as along with 3 people huali guhjy caseybrown
	The logic of chromatin architecture and remodelling at promoters. [My Copy] Nature, Vol. 461, No. 7261. (10 September 2009), pp. 193-198. by Bradley R. Cairns posted to review nucleosomes chromatin-structure by humburg on 2009-09-10 07:34:04 as along with 8 people RyuOgawa hagechouchin443 fenghezi cmzmasek TRHvidsten inesdesantiago rschulz djkt
	An efficient pseudomedian filter for tiling microrrays [My Copy] BMC Bioinformatics, Vol. 8, No. 1. (07 June 2007), 186. by Thomas Royce, Nicholas Carriero, Mark Gerstein posted to tiling-array sliding-window microarray algorithm by humburg on 2009-09-08 23:36:23 as along with 1 person GeeSharpMinor
	High-resolution computational models of genome binding events [My Copy] Nat Biotech, Vol. 24, No. 8. (09 August 2006), pp. 963-970. by Yuan Qi, Alex Rolfe, Kenzie D. Macisaac, et al.Georg K. Gerber, Dmitry Pokholok, Julia Zeitlinger, Timothy Danford, Robin D. Dowell, Ernest Fraenkel, Tommi S. Jaakkola, Richard A. Young, David K. Gifford posted to tiling-array microarray chip-chip algorithm by humburg on 2009-09-02 07:22:55 as along with 9 people and 1 group arsyed Scis0000002 siebert Stew jfr wnpx ccr caseybrown inesdesantiago Bioinformatics - CRUK
	Transcriptional landscape estimation from tiling array data using a model of signal shift and drift. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 18. (15 September 2009), pp. 2341-2347. by Pierre Nicolas, Aurélie Leduc, Stéphane Robin, Simon Rasmussen, Hanne Jarmer, Philippe Bessières posted to tiling-array microarray gene-expression algorithm by humburg on 2009-09-01 06:54:20 as along with 1 person rdiaz
	Chipper: discovering transcription-factor targets from chromatin immunoprecipitation microarrays using variance stabilization [My Copy] Genome Biology, Vol. 6, No. 11. (2005), R96. by Francis Gibbons, Markus Proft, Kevin Struhl, Frederick Roth posted to tiling-array microarray chip-chip algorithm by humburg on 2009-09-01 05:30:46 as along with 3 people and 1 group nklee oelemento blobbybirdman Myxo group
	ChIPOTle: a user-friendly tool for the analysis of ChIP-chip data [My Copy] Genome Biology, Vol. 6, No. 11. (2005), R97. by Michael Buck, Andrew Nobel, Jason Lieb posted to tiling-array microarray algorithm by humburg on 2009-09-01 05:25:06 as along with 3 people and 1 group ashishanand antonkratz kengg Plantandetc
	Genome-wide Map of Nucleosome Acetylation and Methylation in Yeast [My Copy] Cell, Vol. 122, No. 4. (26 August 2005), pp. 517-527. by Dmitry K. Pokholok, Christopher T. Harbison, Stuart Levine, et al.Megan Cole, Nancy M. Hannett, Tong I. Lee, George W. Bell, Kimberly Walker, P. Alex Rolfe, Elizabeth Herbolsheimer posted to yeast tiling-array nucleosomes microarray chromatin-structure by humburg on 2009-09-01 05:07:21 as along with 6 people and 1 group hagechouchin443 nucleosome kengg koller olympos redfish99213 Plantandetc
	Multiple testing methods for ChIP-Chip high density oligonucleotide array data. [My Copy] J Comput Biol, Vol. 13, No. 3. (April 2006), pp. 579-613. by S. Keleş, M. J. van der Laan, S. Dudoit, S. E. Cawley posted to tiling-array multiple-testing microarray analysis by humburg on 2009-09-01 03:13:23 as along with 1 person and 1 group kengg Plantandetc
	Differential analysis for high density tiling microarray data [My Copy] BMC Bioinformatics, Vol. 8, No. 1. (24 September 2007), 359. by Srinka Ghosh, Heather A. Hirsch, Edward A. Sekinger, Philipp Kapranov, Kevin Struhl, Thomas R. Gingeras posted to tiling-array microarray analysis by humburg on 2009-09-01 02:56:11 as along with 4 people ashishanand jfr bertelsen GeeSharpMinor
	Solving the riddle of the bright mismatches: Labeling and effective binding in oligonucleotide arrays [My Copy] Physical Review E, Vol. 68, No. 1. (16 Jul 2003), 011906. by Felix Naef, Marcelo O. Magnasco posted to normalization microarray by humburg on 2009-08-31 05:03:22 as along with 1 person GeeSharpMinor
	A Model for Measurement Error for Gene Expression Arrays [My Copy] Journal of Computational Biology, Vol. 8, No. 6. (November 2001), pp. 557-569. by David M. Rocke, Blythe Durbin posted to normalization microarray by humburg on 2009-08-31 02:32:30 as
	DNA-Chip Analyzer (d-Chip) [My Copy] In THE ANALYSIS OF GENE EXPRESSION DATA: METHODS AND SOFTWARE (March 2003) by Cheng Li, Wing H. Wong posted to normalization microarray analysis by humburg on 2009-08-29 05:48:24 as
	Model-based analysis of oligonucleotide arrays: Expression index computation and outlier detection [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 98, No. 1. (2 January 2001), pp. 31-36. by Cheng Li, Wing H. Wong posted to normalization microarray by humburg on 2009-08-29 00:55:01 as along with 3 people svozil RMGraze bertelsen
	A comprehensive transcript index of the human genome generated using microarrays and computational approaches [My Copy] Genome Biology, Vol. 5, No. 10. (2004), R73. by Eric Schadt, Stephen Edwards, Debraj Guhathakurta, et al.Dan Holder, Lisa Ying, Vladimir Svetnik, Amy Leonardson, Kyle Hart, Archie Russell, Guoya Li, Guy Cavet, John Castle, Paul Mcdonagh, Zhengyan Kan, Ronghua Chen, Andrew Kasarskis, Mihai Margarint, Ramon Caceres, Jason Johnson, Christopher Armour, Philip G. Engele, Nicholas Tsinoremas, Daniel Shoemaker posted to tiling-array microarray human gene-expression by humburg on 2009-08-28 09:17:08 as along with 4 people and 1 group daforerog inesdesantiago jfr kaspermunch Bioinformatics
	Variance stabilization applied to microarray data calibration and to the quantification of differential expression [My Copy] Bioinformatics, Vol. 18, No. suppl_1. (1 July 2002), pp. S96-104. by Wolfgang Huber, Anja von Heydebreck, Holger Sultmann, Annemarie Poustka, Martin Vingron posted to normalization microarray algorithm by humburg on 2009-08-28 05:41:02 as along with 2 people fpattyn baldigroup
	Nucleosome positioning in human HOX gene clusters [My Copy] Genome Research, Vol. 18, No. 10. (22 October 2008), pp. 1554-1561. by Peter V. Kharchenko, Caroline J. Woo, Michael Y. Tolstorukov, Robert E. Kingston, Peter J. Park posted to tiling-array nucleosomes microarray chromatin-structure chip-chip by humburg on 2009-08-28 05:06:31 as along with 2 people inesdesantiago aalibes
	Rank Difference Analysis of Microarrays (RDAM), a novel approach to statistical analysis of microarray expression profiling data [My Copy] BMC Bioinformatics, Vol. 5, No. 1. (11 October 2004), 148. by Dietmar Martin, Philippe Demougin, Michael Hall, Michel Bellis posted to normalization microarray algorithm by humburg on 2009-08-28 04:58:06 as along with 2 people textoris RMGraze
	Chromosomal Distribution of PcG Proteins during Drosophila Development [My Copy] PLoS Biol, Vol. 4, No. 6. (20 April 2006), e170. by Nicolas Nègre, Jérôme Hennetin, Ling V. Sun, et al.Sergey Lavrov, Michel Bellis, Kevin P. White, Giacomo Cavalli posted to drosophila chromatin-structure chip-chip by humburg on 2009-08-28 04:54:20 as along with 1 person johncumbers
	Epigenome Microarray Platform for Proteome-Wide Dissection of Chromatin-Signaling Networks [My Copy] PLoS ONE, Vol. 4, No. 8. (26 August 2009), e6789. by Dennis J. Bua, Alex J. Kuo, Peggie Cheung, et al.Chih L. Liu, Valentina Migliori, Alexsandra Espejo, Fabio Casadio, Christian Bassi, Bruno Amati, Mark T. Bedford, Ernesto Guccione, Or Gozani posted to high-throughput chromatin-structure by humburg on 2009-08-27 07:58:50 as
	Impact of chromatin structures on DNA processing for genomic analyses. [My Copy] PloS one, Vol. 4, No. 8. (20 August 2009), e6700. by Leonid Teytelman, Bilge Ozaydin, Oliver Zill, et al.Philippe Lefrançois, Michael Snyder, Jasper Rine, Michael B. Eisen posted to high-throughput-sequencing chromatin-structure chip-seq by humburg on 2009-08-27 07:47:47 as along with 5 people and 4 groups inesdesantiago fenghezi lthorrez polivares stajich JLab CTCF BergmanLab Mycology
	Genome-Scale Identification of Nucleosome Positions in S. cerevisiae [My Copy] Science, Vol. 309, No. 5734. (22 July 2005), pp. 626-630. by Guo-Cheng Yuan, Yuen-Jong Liu, Michael F. Dion, et al.Michael D. Slack, Lani F. Wu, Steven J. Altschuler, Oliver J. Rando posted to tiling-array nucleosomes microarray chromatin-structure chip-chip by humburg on 2009-08-26 01:48:47 as along with 8 people hagechouchin443 ilyashl aalibes koller olympos redfish99213 epigenetics elzodw
	Global nucleosome occupancy in yeast [My Copy] Genome Biology, Vol. 5, No. 9. (2004), R62. by Bradley Bernstein, Chih Liu, Emily Humphrey, Ethan Perlstein, Stuart Schreiber posted to yeast microarray chip-chip by humburg on 2009-08-26 01:43:39 as along with 4 people and 2 groups hagechouchin443 shantanu nucleosome kengg Plantandetc Chromatin
	A Bivalent Chromatin Structure Marks Key Developmental Genes in Embryonic Stem Cells [My Copy] Cell, Vol. 125, No. 2. (21 April 2006), pp. 315-326. by B. Bernstein, T. Mikkelsen, X. Xie, et al.M. Kamal, D. Huebert, J. Cuff, B. Fry, A. Meissner, M. Wernig, K. Plath posted to chromatin-structure chip-chip by humburg on 2009-08-24 07:51:50 as along with 5 people gderwin inesdesantiago tuck olympos jasonflannick
	Translating the Histone Code [My Copy] Science, Vol. 293, No. 5532. (10 August 2001), pp. 1074-1080. by Thomas Jenuwein, C. David Allis posted to chromatin-structure by humburg on 2009-08-24 06:39:09 as along with 2 people johncumbers olympos
	Epigenetic signatures of stem-cell identity [My Copy] Nat Rev Genet, Vol. 8, No. 4. (April 2007), pp. 263-271. by Mikhail Spivakov, Amanda G. Fisher posted to review epigenetics by humburg on 2009-08-24 02:54:39 as along with 1 person inesdesantiago
	Gene Ontology: tool for the unification of biology [My Copy] Nature Genetics, Vol. 25, No. 1. (01 May 2000), pp. 25-29. by Michael Ashburner, Catherine A. Ball, Judith A. Blake, et al.David Botstein, Heather Butler, J. Michael Cherry, Allan P. Davis, Kara Dolinski, Selina S. Dwight, Janan T. Eppig, Midori A. Harris, David P. Hill, Laurie Issel-Tarver, Andrew Kasarskis, Suzanna Lewis, John C. Matese, Joel E. Richardson, Martin Ringwald, Gerald M. Rubin, Gavin Sherlock posted to resource database annotation by humburg on 2009-08-24 02:21:56 as along with 74 people and 7 groups Jporci artaban421 mtaschuk niallhaslam Zephyrus nicklynch mauriceccy pmendes jperkins timhubbard ipark-kaist jeremymiller vkwn MarcoAlvarez mqbphcw3 kiekyon karinlag ocs marti robert85 allysonlister daforerog chasmand lawraga jorisslob bertelsen mshossain ajbattle paszkows coela fbristow kshameer anthropomorphism nolodie dagmar Robinder verdicchio raistrick vertikalist aalibes miguel dragonrez lfriedl chad_davis yas balajis indigoviolet benny dullhunk nirfriedman fisherp caporaso helliontroy zlu gurkanbebek djkt massivemayhem incovoma leechuck aconesa sgoetz javamint bootsy PunkRock natstreet naegele CitoJam pablomendes carlk marck dgront roys rvosa fongenae BTS-PT-AS-CS kdl Bioinformatics EisenLab T_lab biomedical-nlp FAB-lab
	TRANSFAC(R) and its module TRANSCompel(R): transcriptional gene regulation in eukaryotes [My Copy] Nucleic acids research, Vol. 34, No. Database issue. (1 January 2006), pp. D108-110. by V. Matys, O. V. Kel-Margoulis, E. Fricke, et al.I. Liebich, S. Land, A. Barre-Dirrie, I. Reuter, D. Chekmenev, M. Krull, K. Hornischer, N. Voss, P. Stegmaier, B. Lewicki-Potapov, H. Saxel, A. E. Kel, E. Wingender posted to tf resource database by humburg on 2009-08-24 02:12:35 as along with 6 people daed daveGerrard troels_marstrand reidy frohike guhjy
	A database for post-genome analysis [My Copy] Trends in Genetics, Vol. 13, No. 9. (September 1997), pp. 375-376. by M. Kanehisa posted to tool database by humburg on 2009-08-24 01:44:03 as along with 2 people and 2 groups okarsligil lfriedl kdl Bioinformatics
	Initial sequencing and analysis of the human genome. [My Copy] Nature, Vol. 409, No. 6822. (15 February 2001), pp. 860-921. by E. S. Lander, L. M. Linton, B. Birren, et al.C. Nusbaum, M. C. Zody, J. Baldwin, K. Devon, K. Dewar, M. Doyle, William FitzHugh, R. Funke, D. Gage, K. Harris, A. Heaford, J. Howland, L. Kann, J. Lehoczky, R LeVine, P McEwan, K McKernan, J. Meldrim, J. P. Mesirov, C. Miranda, W. Morris, J. Naylor, C. Raymond, M. Rosetti, R. Santos, A. Sheridan, C. Sougnez, N Stange-Thomann, N. Stojanovic, A. Subramanian, D. Wyman, J. Rogers, J. Sulston, R. Ainscough, S. Beck, D. Bentley, J. Burton, C. Clee, N. Carter, A. Coulson, R. Deadman, P. Deloukas, A. Dunham, I. Dunham, R. Durbin, L. French, D. Grafham, S. Gregory, T. Hubbard, S. Humphray, A. Hunt, M. Jones, C. Lloyd, A McMurray, L. Matthews, S. Mercer, S. Milne, J. C. Mullikin, A. Mungall, R. Plumb, M. Ross, R. Shownkeen, S. Sims, R. H. Waterston, R. K. Wilson, LaDeana W. Hillier, J D. McPherson, M. A. Marra, E. R. Mardis, L. A. Fulton, A. T. Chinwalla, K. H. Pepin, W. R. Gish, S. L. Chissoe, M. C. Wendl, K. D. Delehaunty, T. L. Miner, A. Delehaunty, J. B. Kramer, L. L. Cook, R. S. Fulton, D. L. Johnson, P. J. Minx, S. W. Clifton, T. Hawkins, E. Branscomb, P. Predki, P. Richardson, S. Wenning, T. Slezak, N. Doggett, Jan-Fang Cheng, A. Olsen, S. Lucas, C. Elkin, E. Uberbacher, M. Frazier, R. A. Gibbs, D. M. Muzny, S. E. Scherer, J. B. Bouck, E. J. Sodergren, K. C. Worley, C. M. Rives, J. H. Gorrell, M. L. Metzker, S. L. Naylor, R. S. Kucherlapati, D. L. Nelson, G. M. Weinstock, Y. Sakaki, A. Fujiyama, M. Hattori, T. Yada, A. Toyoda, T. Itoh, C. Kawagoe, H. Watanabe, Y. Totoki, T. Taylor, J. Weissenbach, R. Heilig, W. Saurin, F. Artiguenave, P. Brottier, T. Bruls, E. Pelletier, C. Robert, P. Wincker, D. R. Smith, L Doucette-Stamm, M. Rubenfield, K. Weinstock, H M. Lee, JoAnn Dubois, A Rosenthal, M. Platzer, G. Nyakatura, S. Taudien, A. Rump, H. Yang, J. Yu, J. Wang, G. Huang, J. Gu, L. Hood, L. Rowen, A. Madan, S. Qin, R. W. Davis, N. A. Federspiel, A. P. Abola, M. J. Proctor, R. M. Myers, J. Schmutz, M. Dickson, J. Grimwood, D. R. Cox, M. V. Olson, R. Kaul, C. Raymond, N. Shimizu, K. Kawasaki, S. Minoshima, G. A. Evans, M. Athanasiou, R. Schultz, B. A. Roe, F. Chen, H. Pan, J. Ramser, H. Lehrach, R. Reinhardt, W. R McCombie, M de la Bastide, N. Dedhia, H Blöcker, K. Hornischer, G. Nordsiek, R. Agarwala, L. Aravind, J. A. Bailey, A. Bateman, S. Batzoglou, E. Birney, P. Bork, D. G. Brown, C. B. Burge, L. Cerutti, Hsiu-Chuan Chen, D. Church, M. Clamp, R. R. Copley, T. Doerks, S. R. Eddy, E. E. Eichler, T. S. Furey, J. Galagan, J. G. R. Gilbert, C. Harmon, Y. Hayashizaki, D. Haussler, H. Hermjakob, K. Hokamp, W. Jang, L. S. Johnson, T. A. Jones, S. Kasif, A. Kaspryzk, S. Kennedy, W. J. Kent, P. Kitts, E. V. Koonin, I. Korf, D. Kulp, D. Lancet, T. M. Lowe, Aoife McLysaght, T. Mikkelsen, J. V. Moran, N. Mulder, V. J. Pollara, C. P. Ponting, G. Schuler, Jörg Schultz, G. Slater, A. F. A. Smit, E. Stupka, J. Szustakowki, D Thierry-Mieg, J Thierry-Mieg, L. Wagner, J. Wallis, R. Wheeler, A. Williams, Y. I. Wolf, K. H. Wolfe, Shiaw-Pyng Yang, Ru-Fang Yeh, F. Collins, M. S. Guyer, J. Peterson, A. Felsenfeld, K. A. Wetterstrand, A. Patrinos, M. J. Morgan posted to sequencing human genomics by humburg on 2009-08-23 05:08:31 as along with 37 people and 3 groups rshe timflutre bicko jmanning2k kentz vplagnol mqbphcw3 ThomasDOtto psique timhubbard jo_davies daforerog taroleo micromassive wimufi sgoetz fisherp reyez bozdagd cthachuk Cortel dragonrez jnemecek gg Dax42 aprasad yas balajis xdeupi dullhunk dgront djkt olympos nagendraproj incovoma yoanjacquemin brant Proteinkinases T_lab LabCompMed
	The sequence of the human genome. [My Copy] Science (New York, N.Y.), Vol. 291, No. 5507. (16 February 2001), pp. 1304-1351. by J. C. Venter, M. D. Adams, E. W. Myers, et al.P. W. Li, R. J. Mural, G. G. Sutton, H. O. Smith, M. Yandell, C. A. Evans, R. A. Holt, J. D. Gocayne, P. Amanatides, R. M. Ballew, D. H. Huson, J. R. Wortman, Q. Zhang, C. D. Kodira, X. H. Zheng, L. Chen, M. Skupski, G. Subramanian, P. D. Thomas, J. Zhang, G. L. Gabor Miklos, C. Nelson, S. Broder, A. G. Clark, J. Nadeau, V. A. McKusick, N. Zinder, A. J. Levine, R. J. Roberts, M. Simon, C. Slayman, M. Hunkapiller, R. Bolanos, A. Delcher, I. Dew, D. Fasulo, M. Flanigan, L. Florea, A. Halpern, S. Hannenhalli, S. Kravitz, S. Levy, C. Mobarry, K. Reinert, K. Remington, J. Abu-Threideh, E. Beasley, K. Biddick, V. Bonazzi, R. Brandon, M. Cargill, I. Chandramouliswaran, R. Charlab, K. Chaturvedi, Z. Deng, V. Di Francesco, P. Dunn, K. Eilbeck, C. Evangelista, A. E. Gabrielian, W. Gan, W. Ge, F. Gong, Z. Gu, P. Guan, T. J. Heiman, M. E. Higgins, R. R. Ji, Z. Ke, K. A. Ketchum, Z. Lai, Y. Lei, Z. Li, J. Li, Y. Liang, X. Lin, F. Lu, G. V. Merkulov, N. Milshina, H. M. Moore, A. K. Naik, V. A. Narayan, B. Neelam, D. Nusskern, D. B. Rusch, S. Salzberg, W. Shao, B. Shue, J. Sun, Z. Y. Wang, A. Wang, X. Wang, J. Wang, M. H. Wei, R. Wides, C. Xiao, C. Yan, A. Yao, J. Ye, M. Zhan, W. Zhang, H. Zhang, Q. Zhao, L. Zheng, F. Zhong, W. Zhong, S. C. Zhu, S. Zhao, D. Gilbert, S. Baumhueter, G. Spier, C. Carter, A. Cravchik, T. Woodage, F. Ali, H. An, A. Awe, D. Baldwin, H. Baden, M. Barnstead, I. Barrow, K. Beeson, D. Busam, A. Carver, A. Center, M. L. Cheng, L. Curry, S. Danaher, L. Davenport, R. Desilets, S. Dietz, K. Dodson, L. Doup, S. Ferriera, N. Garg, A. Gluecksmann, B. Hart, J. Haynes, C. Haynes, C. Heiner, S. Hladun, D. Hostin, J. Houck, T. Howland, C. Ibegwam, J. Johnson, F. Kalush, L. Kline, S. Koduru, A. Love, F. Mann, D. May, S. McCawley, T. McIntosh, I. McMullen, M. Moy, L. Moy, B. Murphy, K. Nelson, C. Pfannkoch, E. Pratts, V. Puri, H. Qureshi, M. Reardon, R. Rodriguez, Y. H. Rogers, D. Romblad, B. Ruhfel, R. Scott, C. Sitter, M. Smallwood, E. Stewart, R. Strong, E. Suh, R. Thomas, N. N. Tint, S. Tse, C. Vech, G. Wang, J. Wetter, S. Williams, M. Williams, S. Windsor, E. Winn-Deen, K. Wolfe, J. Zaveri, K. Zaveri, J. F. Abril, R. Guigo, M. J. Campbell, K. V. Sjolander, B. Karlak, A. Kejariwal, H. Mi, B. Lazareva, T. Hatton, A. Narechania, K. Diemer, A. Muruganujan, N. Guo, S. Sato, V. Bafna, S. Istrail, R. Lippert, R. Schwartz, B. Walenz, S. Yooseph, D. Allen, A. Basu, J. Baxendale, L. Blick, M. Caminha, J. Carnes-Stine, P. Caulk, Y. H. Chiang, M. Coyne, C. Dahlke, A. D. Mays, M. Dombroski, M. Donnelly, D. Ely, S. Esparham, C. Fosler, H. Gire, S. Glanowski, K. Glasser, A. Glodek, M. Gorokhov, K. Graham, B. Gropman, M. Harris, J. Heil, S. Henderson, J. Hoover, D. Jennings, C. Jordan, J. Jordan, J. Kasha, L. Kagan, C. Kraft, A. Levitsky, M. Lewis, X. Liu, J. Lopez, D. Ma, W. Majoros, J. McDaniel, S. Murphy, M. Newman, T. Nguyen, N. Nguyen, M. Nodell, S. Pan, J. Peck, M. Peterson, W. Rowe, R. Sanders, J. Scott, M. Simpson, T. Smith, A. Sprague, T. Stockwell, R. Turner, E. Venter, M. Wang, M. Wen, D. Wu, M. Wu, A. Xia, A. Zandieh, X. Zhu posted to sequencing human genomics by humburg on 2009-08-23 05:07:14 as along with 33 people and 3 groups rshe dspringett vplagnol mqbphcw3 Scis0000002 fisherp sgoetz thegoose treangen frohike jo_davies reyez twenta aramata Cortel jwortman jnemecek bicko Dax42 yas balajis xdeupi arcticrasta dgront olympos incovoma naegele mimulus_99 brant granujilla CitoJam renatomilani Neeperando Proteinkinases T_lab LabCompMed
	ACETYLATION AND METHYLATION OF HISTONES AND THEIR POSSIBLE ROLE IN THE REGULATION OF RNA SYNTHESIS. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 51 (May 1964), pp. 786-794. by V. G. Allfrey, R. Faulkner, A. E. Mirsky posted to nucleosomes chromatin-structure by humburg on 2009-08-23 03:53:37 as along with 2 people absterga olympos
	Chromatin structure: a repeating unit of histones and DNA. [My Copy] Science (New York, N.Y.), Vol. 184, No. 139. (24 May 1974), pp. 868-871. by R. D. Kornberg posted to nucleosomes chromatin-structure by humburg on 2009-08-23 02:57:44 as along with 1 person and 1 group skoch3 Koch_Lab
	Comments on sequence normalization of tiling array expression [My Copy] Bioinformatics, Vol. 25, No. 17. (1 September 2009), pp. 2171-2173. by Don Gilbert, Andreas Rechtsteiner posted to tiling-array normalization by humburg on 2009-08-21 08:03:06 as along with 3 people and 1 group djkt rdiaz dswan Bioinformatics
	Genome-wide relationship between histone H3 lysine 4 mono- and tri-methylation and transcription factor binding [My Copy] Genome Research, Vol. 18, No. 12. (3 December 2008), pp. 1906-1917. by A. Gordon Robertson, Mikhail Bilenky, Angela Tam, et al.Yongjun Zhao, Thomas Zeng, Nina Thiessen, Timothee Cezard, Anthony P. Fejes, Elizabeth D. Wederell, Rebecca Cullum, Ghia Euskirchen, Martin Krzywinski, Inanc Birol, Michael Snyder, Pamela A. Hoodless, Martin Hirst, Marco A. Marra, Steven J. M. Jones posted to tf nucleosomes human high-throughput-sequencing chip-seq by humburg on 2009-08-14 06:42:46 as along with 8 people tonamswish gdb ewilban1 natstreet raylim maximilianh jernst cpreviti
	TileProbe: modeling tiling array probe effects using publicly available data [My Copy] Bioinformatics (9 July 2009), btp425. by Jennifer T. Judy, Hongkai Ji posted to chip-chip probe-effect tiling-array by humburg on 2009-08-10 23:30:46 as
	Double error shrinkage method for identifying protein binding sites observed by tiling arrays with limited replication [My Copy] Bioinformatics, Vol. 25, No. 19. (1 October 2009), pp. 2486-2491. by Youngchul Kim, Stefan Bekiranov, Jae K. Lee, Taesung Park posted to algorithm chip-chip tiling-array by humburg on 2009-08-10 23:15:47 as along with 1 person djkt
	Information Theoretical Analysis of Multivariate Correlation [My Copy] IBM Journal of Research and Development, Vol. 4, No. 1. (1960), 66. by S. Watanabe posted to information-theory total-correlation by humburg on 2009-08-08 06:48:14 as

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algorithm	48
high-throughput-sequencing	44
tiling-array	43
chromatin-structure	38
chip-seq	33
chip-chip	31
microarray	31
nucleosomes	24
gene-expression	21
tf	21
hmm	16
human	14
normalization	12
tool	11
analysis	10
parameter-estimation	10
short-read-mapping	8
fdr	7
yeast	6
arabidopsis	5
review	4
sequence-alignment	4
annotation	3
database	3
file-import-09-05-04	3
genomics	3
sequencing	3
snp	3
clustering	2
drosophila	2
epigenetics	2
high-throughput	2
multiple-testing	2
pathway	2
polycomb	2
resource	2
robust	2
visualisation	2
wavelets	2
alternative-splicing	1
auc	1
barley	1
bioinformatics	1
bootstrap	1
cell-type	1
classifiers	1
cnv	1
dna-methylation	1
exon-array	1
gene-ontology	1
graphical-model	1
gwas	1
high	1
information-theory	1
linkage-disequilibrium	1
mads-box	1
mapping	1
meeting	1
mouse	1
network	1
objective	1
parallel-computing	1
parametric	1
phenotype	1
probe-effect	1
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read	1
rice	1
rna	1
roc_curve	1
segmentation	1
short	1
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software-development	1
splicing	1
throughput	1
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