humburg's snp [11 articles] Export

Recent papers added to humburg's library classified by the tag snp. You can also see everyone's snp.

	SNP detection for massively parallel whole-genome resequencing [My Copy] Genome Research, Vol. 19, No. 6. (6 June 2009), pp. 1124-1132. by Ruiqiang Li, Yingrui Li, Xiaodong Fang, et al.Huanming Yang, Jian Wang, Karsten Kristiansen, Jun Wang posted to snp high-throughput-sequencing by humburg on 2009-12-10 16:12:19 as along with 20 people claire_jubin torfinnnome hzoltan seb1 maren adijr greg jandot guhjy jonilaserson n00c druvus reyez sandfire jasontsai djkt sameersoi natstreet jbhiatt GeeSharpMinor
	Deep sequencing to reveal new variants in pooled DNA samples [My Copy] Human Mutation, Vol. 30, No. 12. (4 September 2009), pp. 1703-1712. by Astrid A. Out, Ivonne J. H. M. van Minderhout, Jelle J. Goeman, et al.Yavuz Ariyurek, Stephan Ossowski, Korbinian Schneeberger, Detlef Weigel, Michiel van Galen, Peter E. M. Taschner, Carli M. J. Tops, Martijn H. Breuning, Gert-Jan B. van Ommen, Johan T. den Dunnen, Peter Devilee, Frederik J. Hes posted to snp rare-variants pooled-data high-throughput-sequencing by humburg on 2009-12-09 08:39:32 as along with 3 people n00c liqbbi druvus
	Effect of read-mapping biases on detecting allele-specific expression from RNA-sequencing data [My Copy] Bioinformatics In Bioinformatics, Vol. 25, No. 24. (15 December 2009), pp. 3207-3212. by Jacob F. Degner, John C. Marioni, Athma A. Pai, et al.Joseph K. Pickrell, Everlyne Nkadori, Yoav Gilad, Jonathan K. Pritchard posted to snp sequencing-error high-throughput-sequencing by humburg on 2009-12-08 16:20:35 as along with 10 people and 2 groups jherrero68 djkt jperkins dakelley natstreet chvlyl n00c papamicd torfinnnome heliopais Journal picks Orengo Group Journal Picks
	The theory of discovering rare variants via DNA sequencing. [My Copy] BMC genomics, Vol. 10, No. 1. (2009), 485. by Michael C. Wendl, Richard K. Wilson posted to snp rare-variants high-throughput-sequencing by humburg on 2009-12-07 12:01:46 as along with 5 people jasontsai jsatkosk merpublic n00c druvus
	Quantification of rare allelic variants from pooled genomic DNA. [My Copy] Nature methods, Vol. 6, No. 4. (01 April 2009), pp. 263-265. by Todd E. Druley, Francesco L. Vallania, Daniel J. Wegner, et al.Katherine E. Varley, Olivia L. Knowles, Jacqueline A. Bonds, Sarah W. Robison, Scott W. Doniger, Aaron Hamvas, F. Sessions Cole, Justin C. Fay, Robi D. Mitra posted to snp pooled-data high-throughput-sequencing by humburg on 2009-12-03 12:02:03 as along with 11 people liqbbi jonilaserson n00c austin_mcdonald natstreet guhjy fenghezi giovanni psique absterga jbhiatt
	SNP frequency estimation using massively parallel sequencing of pooled DNA [My Copy] European Journal of Human Genetics In Eur J Hum Genet, Vol. 17, No. 3. (15 October 2008), pp. 383-386. by Max Ingman, Ulf Gyllensten posted to snp pooled-data high-throughput-sequencing by humburg on 2009-12-02 15:35:27 as along with 1 person wimufi
	Quality scores and SNP detection in sequencing-by-synthesis systems [My Copy] Genome Research, Vol. 18, No. 5. (22 May 2008), pp. 763-770. by William Brockman, Pablo Alvarez, Sarah Young, et al.Manuel Garber, Georgia Giannoukos, William L. Lee, Carsten Russ, Eric S. Lander, Chad Nusbaum, David B. Jaffe posted to snp high-throughput-sequencing by humburg on 2009-12-02 15:12:47 as along with 13 people n00c jonilaserson jsatkosk maren natstreet druvus cap1 caseybrown dbensasson bpb Neeperando sharpton GustavoLacerda
	VarScan: variant detection in massively parallel sequencing of individual and pooled samples [My Copy] Bioinformatics, Vol. 25, No. 17. (1 September 2009), pp. 2283-2285. by Daniel C. Koboldt, Ken Chen, Todd Wylie, et al.David E. Larson, Michael D. McLellan, Elaine R. Mardis, George M. Weinstock, Richard K. Wilson, Li Ding posted to snp pooled-data high-throughput-sequencing by humburg on 2009-12-02 14:59:39 as along with 16 people and 3 groups hzoltan Peiyong darian seb1 heliopais mkiyer dakelley djkt PabloMarin guhjy n00c orzenil natstreet druvus stajich malcook Journal picks Mycology SIMR bioinformatics
	Common Regulatory Variation Impacts Gene Expression in a Cell Type-Dependent Manner [My Copy] Science, Vol. 325, No. 5945. (4 September 2009), pp. 1246-1250. by Antigone S. Dimas, Samuel Deutsch, Barbara E. Stranger, et al.Stephen B. Montgomery, Christelle Borel, Homa Attar-Cohen, Catherine Ingle, Claude Beazley, Maria G. Arcelus, Magdalena Sekowska, Marilyne Gagnebin, James Nisbett, Panos Deloukas, Emmanouil T. Dermitzakis, Stylianos E. Antonarakis posted to cell-type gene-expression snp by humburg on 2009-08-07 00:43:45 as along with 13 people provero vplagnol cajunsushi ajbattle xianjun kintoki TRHvidsten djkt fenghezi rdiaz guhjy frohike SeaBird
	SNEP: Simultaneous detection of nucleotide and expression polymorphisms using Affymetrix GeneChip. [My Copy] BMC bioinformatics, Vol. 10 (06 May 2009), 131. by H. Fujisawa, Y. Horiuchi, Y. Harushima, et al.T. Takada, S. Eguchi, T. Mochizuki, T. Sakaguchi, T. Shiroishi, N. Kurata posted to algorithm barley gene-expression microarray mouse rice snp by humburg on 2009-05-07 04:48:01 as along with 2 people guhjy dswan
	A method and program for estimating graphical models for linkage disequilibrium that scale linearly with the number of loci, and their application to gene drop simulation [My Copy] Bioinformatics, Vol. 25, No. 10. (15 May 2009), pp. 1287-1292. by Alun Thomas posted to graphical-model linkage-disequilibrium parameter-estimation snp by humburg on 2009-05-06 23:12:29 as along with 1 person guhjy

Note: You may cite this page as: http://www.citeulike.org/user/humburg/tag/snp

high-throughput-sequencing	69
algorithm	52
tiling-array	43
chromatin-structure	39
chip-seq	34
chip-chip	31
microarray	31
nucleosomes	25
tf	22
gene-expression	21
tool	17
hmm	16
human	14
normalization	12
analysis	11
snp	11
parameter-estimation	10
short-read-mapping	8
yeast	7
fdr	7
review	6
pooled-data	5
mapping	5
arabidopsis	5
sequence-alignment	4
genomics	4
parallel-computing	3
gwas	3
sequencing	3
visualisation	3
annotation	3
file-import-09-05-04	3
database	3
cnv	2
drosophila	2
epigenetics	2
base-calling	2
multiple-testing	2
assembly	2
software	2
wavelets	2
robust	2
simulation	2
rare-variants	2
high-throughput	2
polycomb	2
pathway	2
quality-control	2
r	2
clustering	2
resource	2
short	1
svm	1
objective	1
rice	1
auc	1
cell-type	1
design	1
probe-effect	1
information-theory	1
rna	1
software-development	1
classifiers	1
segmentation	1
bioinformatics	1
targeted	1
mouse	1
quality-scores	1
transcriptome	1
alternative-splicing	1
exon-array	1
bayesian	1
artifacts	1
dna-methylation	1
mads-box	1
diabetes	1
high	1
throughput	1
parametric	1
sv	1
comparison	1
linkage-disequilibrium	1
barley	1
phenotype	1
network	1
paired-end	1
suffix-array	1
graphical-model	1
exons	1
bootstrap	1
meeting	1
pipeline	1
gene-ontology	1
time-course	1
read	1
sliding-window	1
total-correlation	1
roc_curve	1
splicing	1
sequencing-error	1

humburg's snp [11 articles] Export

humburg's tags