idonaldson's library 270 articles Export

	MOODS: fast search for position weight matrix matches in DNA sequences [My Copy] Bioinformatics, Vol. 25, No. 23. (1 December 2009), pp. 3181-3182. by Janne Korhonen, Petri Martinmaki, Cinzia Pizzi, Pasi Rastas, Esko Ukkonen posted to tool scanning matrix by idonaldson on 2009-11-18 09:55:34 as along with 3 people and 1 group ppgardne farhat djkt Journal picks
	W-ChIPMotifs: a web application tool for de novo motif discovery from ChIP-based high-throughput data [My Copy] Bioinformatics, Vol. 25, No. 23. (1 December 2009), pp. 3191-3193. by Victor X. Jin, Jeff Apostolos, Naga S. Nagisetty, Peggy J. Farnham posted to tool ngs motif-discovery by idonaldson on 2009-11-18 09:50:10 as along with 3 people farhat nklee maximilianh
	Structural and dynamic changes of the serum response element and the core domain of serum response factor induced by their association [My Copy] Biochemical and Biophysical Research Communications (10 November 2009) by Josef Štěpánek, Kopecký Jr, Alberto Mezzetti, et al.Pierre-Yves Turpin, Denise Paulin, Bernard Alpert, Christian Zentz posted to srf binding by idonaldson on 2009-11-16 09:59:31 as
	JASPAR 2010: the greatly expanded open-access database of transcription factor binding profiles [My Copy] Nucl. Acids Res. (11 November 2009), gkp950. by Elodie Portales-Casamar, Supat Thongjuea, Andrew T. Kwon, et al.David Arenillas, Xiaobei Zhao, Eivind Valen, Dimas Yusuf, Boris Lenhard, Wyeth W. Wasserman, Albin Sandelin posted to tfbs database by idonaldson on 2009-11-16 09:45:40 as along with 1 person daforerog
	Sole-Search: an integrated analysis program for peak detection and functional annotation using ChIP-seq data [My Copy] Nucl. Acids Res. (11 November 2009), gkp1012. by Kimberly R. Blahnik, Lei Dou, Henriette O'Geen, et al.Timothy McPhillips, Xiaoqin Xu, Alina R. Cao, Sushma Iyengar, Charles M. Nicolet, Bertram Ludascher, Ian Korf, Peggy J. Farnham posted to visualisation peak_detection chip-seq by idonaldson on 2009-11-16 09:43:43 as
	A functional analysis of the CREB signaling pathway using HaloCHIP-chip and high throughput reporter assays [My Copy] BMC Genomics, Vol. 10, No. 1. (27 October 2009), 497. by Danette Hartzell, Nathan Trinklein, Jacqui Mendez, et al.Nancy Murphy, Shelley Aldred, Keith Wood, Marjeta Urh posted to halo-chip-chip creb by idonaldson on 2009-11-11 11:16:07 as
	Phosphorylation of the Human MicroRNA-Generating Complex Mediates MAPK/Erk Signaling [My Copy] Cell, Vol. 139, No. 1. (02 October 2009), pp. 112-122. by Zain Paroo, Xuecheng Ye, She Chen, Qinghua Liu posted to phosphorylation mirna kinase by idonaldson on 2009-11-11 11:15:04 as along with 3 people and 1 group heliopais gbloeb valeriehilgers microRNA
	Profiling the Human Protein-DNA Interactome Reveals ERK2 as a Transcriptional Repressor of Interferon Signaling [My Copy] Cell, Vol. 139, No. 3. (30 October 2009), pp. 610-622. by Shaohui Hu, Zhi Xie, Akishi Onishi, et al.Xueping Yu, Lizhi Jiang, Jimmy Lin, Hee-sool Rho, Crystal Woodard, Hong Wang, Jun-Seop Jeong posted to protein-array pbm by idonaldson on 2009-11-11 08:35:42 as along with 3 people tmmurali renatomilani maximilianh
	BFAST: An Alignment Tool for Large Scale Genome Resequencing [My Copy] PLoS ONE, Vol. 4, No. 11. (11 November 2009), e7767. by Nils Homer, Barry Merriman, Stanley F. Nelson posted to short-read ngs mapping by idonaldson on 2009-11-11 08:32:57 as along with 5 people n00c friendpine zwang druvus torfinnnome
	Erythroid GATA1 function revealed by genome-wide analysis of transcription factor occupancy, histone modifications, and mRNA expression [My Copy] Genome Research (3 November 2009) by Yong Cheng, Weisheng Wu, Swathi Ashok Kumar, et al.Duonan Yu, Wulan Deng, Tamara Tripic, David C. King, Kuan-Bei Chen, Ying Zhang, Daniela Drautz, Belinda Giardine, Stephan C. Schuster, Webb Miller, Francesca Chiaromonte, Yu Zhang, Gerd A. Blobel, Mitchell J. Weiss, Ross C. Hardison posted to chip-seq by idonaldson on 2009-11-05 11:01:42 as
	LookSeq: A browser-based viewer for deep sequencing data [My Copy] Genome Research, Vol. 19, No. 11. (29 November 2009), pp. 2125-2132. by Heinrich M. Manske, Dominic P. Kwiatkowski posted to visualisation ngs genome_browser by idonaldson on 2009-11-03 12:07:51 as along with 27 people and 2 groups hzoltan darian dakelley tonamswish inesdesantiago Thaverkamp heliopais owhitney GustavoLacerda ngehlenborg sandfire fpattyn xianjun katholt stubrown orzenil operon guhjy kongl stajich n00c torfinnnome nuin kshameer neils druvus natstreet BergmanLab Mycology
	A compiled and systematic reference map of nucleosome positions across the Saccharomyces cerevisiae genome [My Copy] Genome Biology, Vol. 10, No. 10. (2009), R109. by Cizhong Jiang, B. Franklin Pugh posted to yeast position nucleosome by idonaldson on 2009-11-03 10:10:18 as along with 3 people venancio aalibes lp2
	Human genomes as email attachments [My Copy] Bioinformatics, Vol. 25, No. 2. (15 January 2009), pp. 274-275. by Scott Christley, Yiming Lu, Chen Li, Xiaohui Xie posted to genome compression by idonaldson on 2009-11-03 10:01:42 as along with 25 people and 3 groups hzoltan kshameer operon guhjy druvus n00c dnewburger djkt mmartin sobolevnrm jfr psique cisevol GeeSharpMinor neils dswan dullhunk siebert hpiwowar nuin cthachuk rschulz treangen renatomilani jmeppley baker-group BergmanLab Bioinformatics
	CpG-depleted promoters harbor tissue-specific transcription factor binding signals--implications for motif overrepresentation analyses [My Copy] Nucl. Acids Res., Vol. 37, No. 19. (1 October 2009), pp. 6305-6315. by Helge G. Roider, Boris Lenhard, Aditi Kanhere, Stefan A. Haas, Martin Vingron posted to tfbs promoter cpg by idonaldson on 2009-10-30 09:45:28 as along with 3 people and 1 group bmajoros daveGerrard maximilianh BergmanLab
	RNA-MATE: a recursive mapping strategy for high-throughput RNA-sequencing data [My Copy] Bioinformatics, Vol. 25, No. 19. (1 October 2009), pp. 2615-2616. by Nicole Cloonan, Qinying Xu, Geoffrey J. Faulkner, et al.Darrin F. Taylor, Dave T. P. Tang, Gabriel Kolle, Sean M. Grimmond posted to short-read rna-seq ngs mapping by idonaldson on 2009-10-28 10:21:04 as along with 14 people and 1 group hzoltan cthachuk ethanmj cassj GeeSharpMinor sbmontgomery shyamsg natstreet dswan druvus samgj n00c guhjy GustavoLacerda Journal picks
	G-compass: A web-based comparative genome browser between human and other vertebrate genomes [My Copy] Bioinformatics (21 October 2009), btp594. by Yoshihiro Kawahara, Ryuichi Sakate, Akihiro Matsuya, et al.Katsuhiko Murakami, Yoshiharu Sato, Hao Zhang, Takashi Gojobori, Takeshi Itoh, Tadashi Imanishi posted to visualisation human genome_browser comparative_genomics by idonaldson on 2009-10-26 13:30:16 as along with 4 people kshameer operon neils druvus
	TagDust--a program to eliminate artifacts from next generation sequencing data [My Copy] Bioinformatics, Vol. 25, No. 21. (1 November 2009), pp. 2839-2840. by Timo Lassmann, Yoshihide Hayashizaki, Carsten O. Daub posted to short-read ngs mapping artefact by idonaldson on 2009-10-23 16:04:03 as along with 19 people and 1 group hzoltan chvlyl operon kshameer djkt rtogawa seb1 nuin debasis jgill GeeSharpMinor sotacam torfinnnome walshtp heliopais jandot n00c rschulz druvus Journal picks
	Updates to the RMAP short-read mapping software [My Copy] Bioinformatics, Vol. 25, No. 21. (1 November 2009), pp. 2841-2842. by Andrew D. Smith, Wen-Yu Chung, Emily Hodges, et al.Jude Kendall, Greg Hannon, James Hicks, Zhenyu Xuan, Michael Q. Zhang posted to short-read ngs mapping by idonaldson on 2009-10-23 15:59:14 as along with 8 people and 1 group seb1 darian natstreet djkt rtogawa heliopais n00c druvus Journal picks
	A report on the 2009 SIG on short read sequencing and algorithms (Short-SIG) [My Copy] Bioinformatics, Vol. 25, No. 21. (1 November 2009), pp. 2863-2864. by Michael Brudno, Paul Medvedev, Jens Stoye, Francisco M. De La Vega posted to short-read ngs mapping by idonaldson on 2009-10-23 15:55:37 as along with 3 people seb1 n00c druvus
	Chromosome Conformation Capture Carbon Copy (5C): a massively parallel solution for mapping interactions between genomic elements. [My Copy] Genome research, Vol. 16, No. 10. (October 2006), pp. 1299-1309. by Josée Dostie, Todd A. Richmond, Ramy A. Arnaout, et al.Rebecca R. Selzer, William L. Lee, Tracey A. Honan, Eric D. Rubio, Anton Krumm, Justin Lamb, Chad Nusbaum, Roland D. Green, Job Dekker posted to ngs 5c by idonaldson on 2009-10-22 09:43:54 as along with 5 people TorstenWaldminghaus polivares WanderingAengus elzodw mdimon
	CloudBurst: highly sensitive read mapping with MapReduce [My Copy] Bioinformatics, Vol. 25, No. 11. (1 June 2009), pp. 1363-1369. by Michael C. Schatz posted to tool short-read ngs mapping by idonaldson on 2009-10-22 09:32:17 as along with 33 people and 2 groups joshdsullivan cthachuk hzoltan jfr walshtp orzenil heliopais dakelley bozdagd agbiotec jandot guhjy n00c cymacs semrich nuin operon AlexBateman fgibson rschulz dswan mitko djkt humburg jmeppley coela vagoskar svenrahmann natstreet brianb Neeperando druvus neils KCL & UCL Bioinformatics Bioinformatics
	Managing and analyzing next-generation sequence data. [My Copy] PLoS computational biology, Vol. 5, No. 6. (26 June 2009), e1000369. by Brent G. Richter, David P. Sexton posted to short-read ngs mapping by idonaldson on 2009-10-22 09:25:47 as along with 41 people and 3 groups Geknitics cthachuk hzoltan chvlyl sameersoi hpaces gdv GeeSharpMinor darian daveGerrard tharris Yanno inesdesantiago jcaddy agbiotec humburg Zephyrus daforerog stubrown GustavoLacerda torfinnnome natstreet polivares orzenil kongl guhjy druvus n00c leemond31 nuin operon jasontsai jmeppley rdiaz michaelbarton dswan reyez kshameer TRHvidsten djkt ppgardne BergmanLab Bioinformatics Journal picks
	HIGH-RESOLUTION NUCLEOSOME MAPPING REVEALS TRANSCRIPTION-DEPENDENT PROMOTER PACKAGING. [My Copy] Genome research (21 October 2009) by Assaf Weiner, Amanda Hughes, Moran Yassour, Oliver Rando, Nir Friedman posted to yeast nucleosome mapping by idonaldson on 2009-10-22 09:23:52 as along with 1 person and 1 group sebastien_vigneau Epigenetics
	From gene expression to gene regulatory networks in Arabidopsis thaliana [My Copy] BMC Systems Biology, Vol. 3, No. 1. (3 September 2009), 85. by Chris Needham, Iain Manfield, Andrew Bulpitt, Philip Gilmartin, David Westhead posted to network microarray by idonaldson on 2009-10-16 08:48:53 as along with 9 people pengchy Borelli ptrobajo danmaclean TRHvidsten rmk barriot natstreet druvus
	Windshield splatter analysis with the Galaxy metagenomic pipeline [My Copy] Genome Research, Vol. 19, No. 11. (9 November 2009), pp. 2144-2153. by Sergei Kosakovsky Pond, Samir Wadhawan, Francesca Chiaromonte, et al.Guruprasad Ananda, Wen-Yu Chung, James Taylor, Anton Nekrutenko posted to galaxy by idonaldson on 2009-10-15 09:35:40 as along with 8 people and 2 groups jmeppley seb1 Katje djkt operon neils jgill kshameer microbiology_nijmegen iSEEM
	Discovering multiple realistic TFBS motifs based on a generalized model. [My Copy] BMC bioinformatics, Vol. 10, No. 1. (7 October 2009), 321. by Tak-Ming M. Chan, Gang Li, Kwong-Sak S. Leung, Kin-Hong H. Lee posted to tool motif-discovery by idonaldson on 2009-10-12 12:05:29 as along with 2 people maximilianh ashishanand
	Retrieve-ensembl-seq: user-friendly and large-scale retrieval of single or multi-genome sequences from Ensembl [My Copy] Bioinformatics, Vol. 25, No. 20. (15 October 2009), pp. 2739-2740. by Olivier Sand, Morgane Thomas-Chollier, Jacques van Helden posted to tool sequence retrieve ensembl by idonaldson on 2009-10-09 08:53:57 as along with 4 people druvus inesdesantiago natstreet sebastien_vigneau
	The Integrated Genome Browser: free software for distribution and exploration of genome-scale datasets [My Copy] Bioinformatics, Vol. 25, No. 20. (15 October 2009), pp. 2730-2731. by John W. Nicol, Gregg A. Helt, Steven G. Blanchard, Archana Raja, Ann E. Loraine posted to visualisation genome_browser by idonaldson on 2009-10-09 08:49:34 as along with 10 people and 2 groups jforment dokky inesdesantiago daforerog torfinnnome pkonings sebastien_vigneau guhjy natstreet druvus Bioinformatics Core Service ronbun_2009au
	BayesPeak: Bayesian analysis of ChIP-seq data [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 299. by Christiana Spyrou, Rory Stark, Andy Lynch, Simon Tavare posted to tool ngs chip-seq by idonaldson on 2009-09-28 10:30:42 as along with 11 people and 4 groups Vincent_Rouilly tonamswish dswan fenghezi inesdesantiago polivares mkiyer druvus stajich humburg rschulz Bioinformatics JLab BergmanLab Mycology
	The Sequence Alignment/Map format and SAMtools [My Copy] Bioinformatics, Vol. 25, No. 16. (15 August 2009), pp. 2078-2079. by Heng Li, Bob Handsaker, Alec Wysoker, et al.Tim Fennell, Jue Ruan, Nils Homer, Gabor Marth, Goncalo Abecasis, Richard Durbin, 1000 Genome Project Data Processing Subgroup posted to tool ngs by idonaldson on 2009-09-28 10:04:43 as along with 27 people and 2 groups cthachuk hzoltan seb1 heliopais urgi GustavoLacerda stubrown cassj kshameer ciax polivares carlosjavierna jandot katholt jmcq guhjy orzenil jasontsai operon farhat AlexBateman chrisamiller nuin n00c natstreet sandfire druvus BergmanLab Journal picks
	Discovery of regulatory elements in vertebrates through comparative genomics [My Copy] Nature Biotechnology, Vol. 23, No. 10. (06 October 2005), pp. 1249-1256. by Amol Prakash, Martin Tompa posted to tfbs review regulatory_elements comparative_genomics by idonaldson on 2009-09-23 09:02:20 as along with 3 people and 3 groups aprasad indigoviolet dchughes EisenLab G4ID Genetics-of-Gambling
	Bioinformatics for the 'bench biologist': how to find regulatory regions in genomic DNA [My Copy] Nature Immunology, Vol. 5, No. 8. (01 August 2004), pp. 768-774. by Julie Nardone, Dong U. Lee, K. Mark Ansel, Anjana Rao posted to review regulatory_elements by idonaldson on 2009-09-22 09:23:23 as along with 5 people nklee ziquje moborg kianpeng Jporci
	Close encounters of the 3C kind: long-range chromatin interactions and transcriptional regulation [My Copy] Brief Funct Genomic Proteomic, Vol. 8, No. 4. (1 July 2009), pp. 297-309. by Robert-Jan Theo Sijtse Palstra posted to 3c by idonaldson on 2009-09-14 09:26:11 as
	The transcriptional program controlled by the stem cell leukemia gene Scl/Tal1 during early embryonic hematopoietic development. [My Copy] Blood, Vol. 113, No. 22. (28 May 2009), pp. 5456-5465. by Nicola K. Wilson, Diego Miranda-Saavedra, Sarah Kinston, et al.Nicolas Bonadies, Samuel D. Foster, Fernando Calero-Nieto, Mark A. Dawson, Ian J. Donaldson, Stephanie Dumon, Jonathan Frampton, Rekin's Janky, Xiao-Hong H. Sun, Sarah A. Teichmann, Andrew J. Bannister, Berthold Göttgens posted to ngs me gottgens chip-seq by idonaldson on 2009-09-10 14:43:46 as
	ID1 promotes expansion and survival of primary erythroid cells and is a target of JAK2V617F-STAT5 signaling. [My Copy] Blood, Vol. 114, No. 9. (27 August 2009), pp. 1820-1830. by Andrew D. Wood, Edwin Chen, Ian J. Donaldson, et al.Shilpa Hattangadi, Karly A. Burke, Mark A. Dawson, Diego Miranda-Saavedra, Harvey F. Lodish, Anthony R. Green, Berthold Göttgens posted to ngs me gottgens chip-seq by idonaldson on 2009-09-10 14:42:52 as
	Mapping and quantifying mammalian transcriptomes by RNA-Seq. [My Copy] Nature methods, Vol. 5, No. 7. (30 July 2008), pp. 621-628. by Ali Mortazavi, Brian A. Williams, Kenneth McCue, Lorian Schaeffer, Barbara Wold posted to rna-seq method by idonaldson on 2009-09-10 14:38:11 as along with 41 people and 2 groups cthachuk hzoltan jwfoley heliopais juokcho aktas debasis bertelsen darian stubrown dswan ewilban1 mtagaya woodson8 burak jonilaserson inesdesantiago ThomasDOtto n00c GustavoG ghattem vplagnol druvus cfvillalta vmsr poschm dandaman shikin jmcq rschulz lp2 tmcphillips jfr myourshaw megraw GeeSharpMinor caseybrown xingxu guhjy shurjo gdb Bioinformatics SIMR bioinformatics
	ChIP\|[ndash]\|seq: advantages and challenges of a maturing technology [My Copy] Nature Reviews Genetics, Vol. 10, No. 10. (08 September 2009), pp. 669-680. by Peter J. Park posted to review ngs chip-seq by idonaldson on 2009-09-10 11:45:38 as along with 23 people and 6 groups hzoltan dchughes RyuOgawa heliopais giovenko inesdesantiago pradiptaray dakelley clearbluespring akundaje rdiaz kimorley leliavski humburg reyez qayub fenghezi tonamswish robertrentzsch polivares rschulz cvaldes danmaclean Journal picks Orengo Group Journal Picks JLab BergmanLab CTCF Chromatin
	A high-resolution atlas of nucleosome occupancy in yeast [My Copy] Nat Genet, Vol. 39, No. 10. (16 October 2007), pp. 1235-1244. by William Lee, Desiree Tillo, Nicolas Bray, et al.Randall H. Morse, Ronald W. Davis, Timothy R. Hughes, Corey Nislow posted to yeast nfr by idonaldson on 2009-09-10 09:15:32 as along with 5 people hagechouchin443 waszak aalibes epigenetics siebert
	Dissecting Nucleosome Free Regions by a Segmental Semi-Markov Model [My Copy] PLoS ONE, Vol. 4, No. 3. (6 March 2009), e4721. by Wei Sun, Wei Xie, Feng Xu, Michael Grunstein, Ker-Chau Li posted to yeast nfr by idonaldson on 2009-09-01 15:53:13 as along with 1 person and 1 group cisevol BergmanLab
	ViTraM: visualization of transcriptional modules. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 18. (15 September 2009), pp. 2450-2451. by Hong Sun, Karen Lemmens, Tim Van den Bulcke, Kristof Engelen, Bart De Moor, Kathleen Marchal posted to visualisation go expression by idonaldson on 2009-09-01 11:59:47 as along with 4 people natstreet TRHvidsten guhjy frohike
	Developmental roles of 21 Drosophila transcription factors are determined by quantitative differences in binding to an overlapping set of thousands of genomic regions [My Copy] Genome Biology, Vol. 10, No. 7. (23 July 2009), R80. by Stewart MacArthur, Xiao Y. Li, Jingyi Li, et al.James Brown, Hou C. Chu, Lucy Zeng, Brandi Grondona, Aaron Hechmer, Lisa Simirenko, Soile Keranen, David Knowles, Mark Stapleton, Peter Bickel, Mark Biggin, Michael Eisen posted to tfbs drosophila chip-chip by idonaldson on 2009-09-01 11:18:15 as along with 11 people and 2 groups venancio aalibes fenghezi daveGerrard megraw scjparker maximilianh djkt isimpson Stew druvus BergmanLab Bioinformatics - CRUK
	Chromatin poises miRNA- and protein-coding genes for expression. [My Copy] Genome research, Vol. 19, No. 10. (27 October 2009), pp. 1742-1751. by Artem Barski, Raja Jothi, Suresh Cuddapah, et al.Kairong Cui, Tae-Young Y. Roh, Dustin E. Schones, Keji Zhao posted to modification expression chromatin by idonaldson on 2009-09-01 09:56:39 as along with 9 people and 2 groups tonamswish heliopais samgj polivares megraw inesdesantiago fpattyn djkt fenghezi microRNA Neuroblastoma
	CEAS: cis-regulatory element annotation system [My Copy] Bioinformatics, Vol. 25, No. 19. (1 October 2009), pp. 2605-2606. by Hyunjin Shin, Tao Liu, Arjun K. Manrai, X. Shirley Liu posted to tool chip-seq chip-chip by idonaldson on 2009-08-24 10:26:34 as along with 5 people maximilianh druvus ewilban1 guhjy nuin
	Insights from genomic profiling of transcription factors [My Copy] Nature Reviews Genetics, Vol. 10, No. 9. (11 August 2009), pp. 605-616. by Peggy J. Farnham posted to review chip-seq by idonaldson on 2009-08-17 09:41:09 as along with 17 people and 2 groups heliopais inesdesantiago fenghezi nklee samanthacooper fpattyn druvus frohike stubrown qayub megraw TRHvidsten mkiyer ericrpaquet ilyashl jbhiatt danmaclean Journal picks Chinnaiyan Lab
	JBrowse: A next-generation genome browser [My Copy] Genome Research, Vol. 19, No. 9. (1 September 2009), pp. 1630-1638. by Mitchell E. Skinner, Andrew V. Uzilov, Lincoln D. Stein, Christopher J. Mungall, Ian H. Holmes posted to visualisation tool genome by idonaldson on 2009-08-14 15:29:31 as along with 28 people and 2 groups hzoltan darian mkiyer daforerog n00c torfinnnome fenghezi djkt WXuan Zephyrus pkonings inesdesantiago jcbarret jamselem aprasad urgi polivares cassj guhjy giovanni druvus natstreet fpattyn cisevol danmaclean timhubbard operon neils BergmanLab Journal picks
	Computational methods for the detection of cis-regulatory modules [My Copy] Brief Bioinform, Vol. 10, No. 5. (1 September 2009), pp. 509-524. by Peter Van Loo, Peter Marynen posted to review crm by idonaldson on 2009-08-14 09:37:22 as along with 5 people and 1 group reyez kshameer nklee cisevol druvus BergmanLab
	Statistical detection of cooperative transcription factors with similarity adjustment. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 16. (15 August 2009), pp. 2103-2109. by Utz J. Pape, Holger Klein, Martin Vingron posted to tfbs cooperative binding by idonaldson on 2009-08-13 13:33:45 as along with 2 people TRHvidsten djkt
	Extracting transcription factor targets from ChIP-Seq data [My Copy] Nucl. Acids Res., Vol. 37, No. 17. (1 September 2009), e113. by Geetu Tuteja, Peter White, Jonathan Schug, Klaus H. Kaestner posted to tool tfbs chip-seq by idonaldson on 2009-08-11 13:47:54 as along with 14 people and 4 groups hzoltan Vincent_Rouilly mfgreen ewilban1 guhjy mkiyer rschulz fenghezi clearbluespring thegoose robeirne inesdesantiago malcook polivares Chinnaiyan Lab SIMR bioinformatics BergmanLab Journal picks
	Global analysis of in vivo Foxa2-binding sites in mouse adult liver using massively parallel sequencing [My Copy] Nucl. Acids Res., Vol. 36, No. 14. (1 August 2008), pp. 4549-4564. by Elizabeth D. Wederell, Mikhail Bilenky, Rebecca Cullum, et al.Nina Thiessen, Melis Dagpinar, Allen Delaney, Richard Varhol, Yongjun Zhao, Thomas Zeng, Bridget Bernier, Matthew Ingham, Martin Hirst, Gordon Robertson, Marco A. Marra, Steven Jones, Pamela A. Hoodless posted to chip-seq forkhead by idonaldson on 2009-08-10 10:58:33 as
	Distinguishing direct versus indirect transcription factorâDNA interactions [My Copy] Genome Research, Vol. 19, No. 11. (3 November 2009), pp. 2090-2100. by Raluca GordÃ¢n, Alexander J. Hartemink, Martha L. Bulyk posted to chip-chip indirect by idonaldson on 2009-08-10 09:54:47 as along with 11 people oannes nklee djkt vingron venancio owhitney tmmurali emptyhb maximilianh jbhiatt frohike

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transposon-free-regions	1
ucsc	1
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idonaldson's library 270 articles Export

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