idonaldson's Green:RD [4 articles] Export Sort

Recent papers posted to idonaldson's library by the author Green:RD. You can also see everyone's Green:RD.

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	Transcriptional enhancement by GATA1-occupied DNA segments is strongly associated with evolutionary constraint on the binding site motif. [My Copy] Genome research, Vol. 18, No. 12. (25 December 2008), pp. 1896-1905. by Yong Cheng, David C. King, Louis C. Dore, et al.Xinmin Zhang, Yuepin Zhou, Ying Zhang, Christine Dorman, Demesew Abebe, Swathi A. Kumar, Francesca Chiaromonte, Webb Miller, Roland D. Green, Mitchell J. Weiss, Ross C. Hardison posted to motif evolutionary_constraint by idonaldson on 2009-12-11 09:44:14 as along with 2 people emptyhb maximilianh
	Chromosome Conformation Capture Carbon Copy (5C): a massively parallel solution for mapping interactions between genomic elements. [My Copy] Genome research, Vol. 16, No. 10. (October 2006), pp. 1299-1309. by Josée Dostie, Todd A. Richmond, Ramy A. Arnaout, et al.Rebecca R. Selzer, William L. Lee, Tracey A. Honan, Eric D. Rubio, Anton Krumm, Justin Lamb, Chad Nusbaum, Roland D. Green, Job Dekker posted to ngs 5c by idonaldson on 2009-10-22 09:43:54 as along with 5 people TorstenWaldminghaus polivares WanderingAengus elzodw mdimon
	Histone modifications at human enhancers reflect global cell-type-specific gene expression [My Copy] Nature, Vol. 459, No. 7243. (18 March 2009), pp. 108-112. by Nathaniel D. Heintzman, Gary C. Hon, R. David Hawkins, et al.Pouya Kheradpour, Alexander Stark, Lindsey F. Harp, Zhen Ye, Leonard K. Lee, Rhona K. Stuart, Christina W. Ching, Keith A. Ching, Jessica E. Antosiewicz-Bourget, Hui Liu, Xinmin Zhang, Roland D. Green, Victor V. Lobanenkov, Ron Stewart, James A. Thomson, Gregory E. Crawford, Manolis Kellis, Bing Ren posted to crm histone human tissue-specific by idonaldson on 2009-03-23 16:54:24 as along with 17 people and 2 groups rpatward akakak suizifish RyuOgawa inesdesantiago gdb djkt tonamswish t08681mn akundaje leliavski scjparker fenghezi TRHvidsten humburg frohike sebastien_vigneau Epigenetics CTCF
	Systematic evaluation of variability in ChIP-chip experiments using predefined DNA targets [My Copy] Genome Research, Vol. 18, No. 3. (7 March 2008), pp. 393-403. by David S. Johnson, Wei Li, D. Benjamin Gordon, et al.Arindam Bhattacharjee, Bo Curry, Jayati Ghosh, Leonardo Brizuela, Jason S. Carroll, Myles Brown, Paul Flicek, Christoph M. Koch, Ian Dunham, Mark Bieda, Xiaoqin Xu, Peggy J. Farnham, Philipp Kapranov, David A. Nix, Thomas R. Gingeras, Xinmin Zhang, Heather Holster, Nan Jiang, Roland D. Green, Jun S. Song, Scott A. Mccuine, Elizabeth Anton, Loan Nguyen, Nathan D. Trinklein, Zhen Ye, Keith Ching, David Hawkins, Bing Ren, Peter C. Scacheri, Joel Rozowsky, Alexander Karpikov, Ghia Euskirchen, Sherman Weissman, Mark Gerstein, Michael Snyder, Annie Yang, Zarmik Moqtaderi, Heather Hirsch, Hennady P. Shulha, Yutao Fu, Zhiping Weng, Kevin Struhl, Richard M. Myers, Jason D. Lieb, X. Shirley Liu posted to chip-chip comparison by idonaldson on 2008-02-12 17:07:30 as along with 12 people and 2 groups fenghezi jfr kengg djkt xiaobeizhao cabbagezs caseybrown magusina lp2 stajich gracio gdb BergmanLab Mycology

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tool	115
tfbs	54
motif-discovery	31
chip-seq	29
chip-chip	28
ngs	26
cis-regulation	25
crm	22
motif	19
mapping	15
review	15
conserved	15
short-read	14
promoter	13
yeast	11
networks	10
visualisation	10
me	9
nucleosome	9
prediction	8
expression	8
comparison	8
regulation	7
human	7
method	7
matrix	7
te	7
tissue-specific	6
transcription-factor	6
gene	6
go	6
position	5
tss	5
genome	5
alignment	5
binding	5
forkhead	5
microarray	4
text-mining	4
sequence	4
gene-set	4
analysis	4
cancer	4
primer	4
gottgens	4
statistics	4
combinatorial	4
chromatin	4
mouse	3
histone	3
rna-seq	3
genome_browser	3
srf	3
scanning	3
modification	3
orthologues	3
comparative_genomics	3
database	3
network	3
nfr	2
cooperative	2
re1	2
exon-array	2
structural	2
multiple	2
bayesian	2
creb	2
evolution	2
regulatory_elements	2
3c	2
discovery	2
distribution	2
epitope-tagging	2
peak_detection	2
hmm	2
mirna	2
spacing	2
list	2
flag	2
haematopoiesis	2
browser	2
methylation	1
ccds	1
ebox	1
drosophila	1
error	1
plasmodium	1
fdr	1
motifs	1
functional	1
topology	1
p53	1
protein-coding	1
compression	1
enhancer	1
apoptosis	1
deconvolution	1
myod	1
transgenic	1
muscle	1
journal	1
name	1
dna-interactions	1
over-optimism	1
chimp	1
ncrna	1
ensembl	1
polymerase	1
organisation	1
kinase	1
r	1
retrieve	1
snp	1
pbm	1
rsat	1
fungi	1
assembler	1
stem-cells	1
lyl	1
genomic	1
scoring	1
interaction	1
chromosome	1
insulator	1
cpg	1
roc	1
non-coding	1
bro	1
5c	1
chromosome-territory	1
priner	1
smad	1
enrichment	1
mps	1
neighbouring	1
protein-array	1
ssr	1
nactem	1
periodicity	1
nimblegen	1
artefact	1
procedure	1
pathway	1
ctcf	1
phosphorylation	1
housekeeping	1
specificity	1
ribosome	1
yy1	1
chromosome-kissing	1
multiple-testing	1
phylogenetic	1
carg	1
random	1
gastric	1
promoter-sharing	1
evolutionary_constraint	1
galaxy	1
indirect	1
g4	1
sumoylation	1
transcription	1
ucsc	1
5utr	1
transposon-free-regions	1
annotation	1
footprint	1
protein	1
ecm	1
halo-chip-chip	1

idonaldson's Green:RD [4 articles] Export Sort

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