idonaldson's Rozowsky:J [3 articles] Export

Recent papers posted to idonaldson's library by the author Rozowsky:J. You can also see everyone's Rozowsky:J.

	PeakSeq enables systematic scoring of ChIP-seq experiments relative to controls. [My Copy] Nature biotechnology, Vol. 27, No. 1. (04 January 2009), pp. 66-75. by Joel Rozowsky, Ghia Euskirchen, Raymond K. Auerbach, et al.Zhengdong D. Zhang, Theodore Gibson, Robert Bjornson, Nicholas Carriero, Michael Snyder, Mark B. Gerstein posted to chip-seq tool by idonaldson on 2009-01-13 13:17:06 as along with 19 people and 1 group bedo hzoltan fpattyn gdb huali ewilban1 fenghezi smiddha jfr bertelsen JeremyZucker cassj inesdesantiago dakelley ghattem abizar polivares WanderingAengus guhjy SIMR bioinformatics
	Mapping of transcription factor binding regions in mammalian cells by ChIP: Comparison of array- and sequencing-based technologies [My Copy] Genome Res., Vol. 17, No. 6. (1 June 2007), pp. 898-909. by Ghia M. Euskirchen, Joel S. Rozowsky, Chia-Lin Wei, et al.Wah H. Lee, Zhengdong D. Zhang, Stephen Hartman, Olof Emanuelsson, Viktor Stolc, Sherman Weissman, Mark B. Gerstein, Yijun Ruan, Michael Snyder posted to chip-chip chip-seq comparison by idonaldson on 2008-02-20 14:32:15 as along with 6 people and 4 groups kengg jtaylor ghattem epigenetics blobbybirdman isimpson Bioinformatics Plantandetc UH - Computational Biology BergmanLab
	Systematic evaluation of variability in ChIP-chip experiments using predefined DNA targets [My Copy] Genome Research, Vol. 18, No. 3. (7 March 2008), pp. 393-403. by David S. Johnson, Wei Li, D. Benjamin Gordon, et al.Arindam Bhattacharjee, Bo Curry, Jayati Ghosh, Leonardo Brizuela, Jason S. Carroll, Myles Brown, Paul Flicek, Christoph M. Koch, Ian Dunham, Mark Bieda, Xiaoqin Xu, Peggy J. Farnham, Philipp Kapranov, David A. Nix, Thomas R. Gingeras, Xinmin Zhang, Heather Holster, Nan Jiang, Roland D. Green, Jun S. Song, Scott A. Mccuine, Elizabeth Anton, Loan Nguyen, Nathan D. Trinklein, Zhen Ye, Keith Ching, David Hawkins, Bing Ren, Peter C. Scacheri, Joel Rozowsky, Alexander Karpikov, Ghia Euskirchen, Sherman Weissman, Mark Gerstein, Michael Snyder, Annie Yang, Zarmik Moqtaderi, Heather Hirsch, Hennady P. Shulha, Yutao Fu, Zhiping Weng, Kevin Struhl, Richard M. Myers, Jason D. Lieb, X. Shirley Liu posted to chip-chip comparison by idonaldson on 2008-02-12 17:07:30 as along with 12 people and 2 groups fenghezi jfr kengg djkt xiaobeizhao cabbagezs caseybrown magusina lp2 stajich gracio gdb BergmanLab Mycology

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tool	115
tfbs	54
motif-discovery	31
chip-seq	29
chip-chip	28
ngs	26
cis-regulation	25
crm	22
motif	19
mapping	15
review	15
conserved	15
short-read	14
promoter	13
yeast	11
networks	10
visualisation	10
me	9
nucleosome	9
prediction	8
expression	8
comparison	8
regulation	7
human	7
method	7
matrix	7
te	7
tissue-specific	6
transcription-factor	6
gene	6
go	6
position	5
tss	5
genome	5
alignment	5
binding	5
forkhead	5
microarray	4
text-mining	4
sequence	4
gene-set	4
analysis	4
cancer	4
primer	4
gottgens	4
statistics	4
combinatorial	4
chromatin	4
mouse	3
histone	3
rna-seq	3
genome_browser	3
srf	3
scanning	3
modification	3
orthologues	3
comparative_genomics	3
database	3
network	3
nfr	2
cooperative	2
re1	2
exon-array	2
structural	2
multiple	2
bayesian	2
creb	2
evolution	2
regulatory_elements	2
3c	2
discovery	2
distribution	2
epitope-tagging	2
peak_detection	2
hmm	2
mirna	2
spacing	2
list	2
flag	2
haematopoiesis	2
browser	2
methylation	1
ccds	1
ebox	1
drosophila	1
error	1
plasmodium	1
fdr	1
motifs	1
functional	1
topology	1
p53	1
protein-coding	1
compression	1
enhancer	1
apoptosis	1
deconvolution	1
myod	1
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muscle	1
journal	1
name	1
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chimp	1
ncrna	1
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r	1
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lyl	1
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insulator	1
cpg	1
roc	1
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bro	1
5c	1
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priner	1
smad	1
enrichment	1
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protein-array	1
ssr	1
nactem	1
periodicity	1
nimblegen	1
artefact	1
procedure	1
pathway	1
ctcf	1
phosphorylation	1
housekeeping	1
specificity	1
ribosome	1
yy1	1
chromosome-kissing	1
multiple-testing	1
phylogenetic	1
carg	1
random	1
gastric	1
promoter-sharing	1
evolutionary_constraint	1
galaxy	1
indirect	1
g4	1
sumoylation	1
transcription	1
ucsc	1
5utr	1
transposon-free-regions	1
annotation	1
footprint	1
protein	1
ecm	1
halo-chip-chip	1

idonaldson's Rozowsky:J [3 articles] Export

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