ihaque's library 63 articles Export

	PAPER - Accelerating parallel evaluations of ROCS [My Copy] Journal of Computational Chemistry, Vol. 9999, No. 9999. (2009), NA. by Imran S. Haque, Vijay S. Pande posted to rocs gpu by ihaque on 2009-09-12 05:03:57 as along with 1 person and 1 group sobolevnrm baker-group
	Quantum Chemistry on Graphical Processing Units. 1. Strategies for Two-Electron Integral Evaluation [My Copy] Journal of Chemical Theory and Computation, Vol. 4, No. 2. (1 February 2008), pp. 222-231. by Ivan S. Ufimtsev, Todd J. Martinez posted to no-tag by ihaque on 2009-09-12 03:49:51 as along with 1 person RamuAnandakrishnan
	Accelerating molecular modeling applications with graphics processors [My Copy] Journal of Computational Chemistry, Vol. 28, No. 16. (25 September 2007), pp. 2618-2640. by John E. Stone, James C. Phillips, Peter L. Freddolino, David J. Hardy, Leonardo G. Trabuco, Klaus Schulten posted to no-tag by ihaque on 2009-09-12 03:48:53 as along with 9 people and 1 group naoya charris5 timg BragilMassoud ruvido sobolevnrm yalexeev mikaellund afenley baker-group
	Current performance gains from utilizing the GPU or the ASIC MDGRAPE-3 within an enhanced Poisson Boltzmann approach [My Copy] Journal of Computational Chemistry, Vol. 30, No. 14. (2009), pp. 2351-2357. by Tetsu Narumi, Kenji Yasuoka, Makoto Taiji, Siegfried Höfinger posted to no-tag by ihaque on 2009-09-12 03:47:39 as along with 1 person RamuAnandakrishnan
	CUDA compatible GPU cards as efficient hardware accelerators for Smith-Waterman sequence alignment [My Copy] BMC Bioinformatics, Vol. 9, No. Suppl 2. (2008), S10. by Svetlin Manavski, Giorgio Valle posted to no-tag by ihaque on 2009-09-12 03:47:25 as along with 9 people jmanning2k druvus sterovetta operon alexgeorgiou antonkratz joule pansapiens bschaeli
	Accelerating Resolution-of-the-Identity Second-Order Moller−Plesset Quantum Chemistry Calculations with Graphical Processing Units† [My Copy] The Journal of Physical Chemistry A, Vol. 112, No. 10. (1 March 2008), pp. 2049-2057. by Leslie Vogt, Roberto Olivares-Amaya, Sean Kermes, Yihan Shao, Carlos Amador-Bedolla, Alan Aspuru-Guzik posted to no-tag by ihaque on 2009-09-12 03:47:08 as along with 1 person j3xucite
	Two-electron integral evaluation on the graphics processor unit [My Copy] Journal of Computational Chemistry, Vol. 29, No. 3. (2008), pp. 334-342. by Koji Yasuda posted to no-tag by ihaque on 2009-09-12 03:46:50 as
	November 2008 TOP500 Supercomputing Sites [My Copy] http://www.top500.org/lists/2008/11 by Top500 posted to no-tag by ihaque on 2009-04-07 02:04:20 as
	GPUGRID [My Copy] http://www.gpugrid.net by Gianni De Fabritiis posted to no-tag by ihaque on 2009-04-07 01:57:08 as
	Folding@home: Lessons From Eight Years of Volunteer Distributed Computing [My Copy] In 8th IEEE International Workshop on High Performance Computational Biology (HiCOMB 2009) in conjunction with the IEEE International Parallel and Distributed Processing Symposium (IPDPS 2009) by Adam L. Beberg, Dan L. Ensign, Guha Jayachandran, Siraj Khaliq, Vijay S. Pande posted to fah by ihaque on 2009-04-07 01:56:21 as
	Fast Support Vector Machine Training and Classification on Graphics Processors [My Copy] In Proceedings of the 25th International Conference on Machine Learning (ICML 2008) (2008), pp. 104-111. by Bryan Catanzaro, Narayan Sundaram, Kurt Keutzer posted to cuda by ihaque on 2009-04-07 01:36:11 as along with 2 people cwr jmetzen
	GeoLite City [My Copy] http://www.maxmind.com by MaxMind posted to no-tag by ihaque on 2009-04-06 01:12:55 as
	COMPUTING: Screen Savers of the World Unite! [My Copy] Science, Vol. 290, No. 5498. (8 December 2000), pp. 1903-1904. by Michael Shirts, Vijay S. Pande posted to fah by ihaque on 2009-04-06 00:56:16 as
	Memtest86 [My Copy] http://www.memtest86.com by Chris Brady posted to no-tag by ihaque on 2009-04-06 00:36:11 as
	Random number generators: good ones are hard to find [My Copy] Commun. ACM, Vol. 31, No. 10. (October 1988), pp. 1192-1201. by S. K. Park, K. W. Miller posted to no-tag by ihaque on 2009-04-06 00:21:53 as along with 3 people slarew markato ddahlem
	Data Mining: Practical Machine Learning Tools and Techniques, Second Edition (Morgan Kaufmann Series in Data Management Systems) [My Copy] (22 June 2005) by Ian H. Witten, Eibe Frank posted to no-tag by ihaque on 2009-04-06 00:18:14 as along with 47 people and 6 groups anib singhsh installe tomjad malibu pinventado alexjfalcao fiacobelli liamtoh333 tijszwinkels sugarexpletive karinaecomp gstiglic haiyeong imrchen baaic RafaUsyd tmancill druvus dullhunk GJNauta sb-3000 sammydre balicea sdvillal caporaso AbnerCYH brunomelo dejang mdifranc BastianSpanneberg velasco azazello ezralanglois pprett gmonce fernandohbc scorreia_pro csacca jdu bobychan napvasconcelos soramame_0518 abellogin quianominorleo eegilbert akastrin mlkd WAND AI biomedical-nlp RiSE CSBBGraphTheory
	Elements of Information Theory 2nd Edition (Wiley Series in Telecommunications and Signal Processing) [My Copy] (18 July 2006) by Thomas M. Cover, Joy A. Thomas posted to infotheory by ihaque on 2009-04-06 00:17:23 as along with 20 people and 3 groups elsantosneto abominable feist asterix77 fredknabe Diego_Prada gerold ejmeij michaelmampaey danielaugot ansobol mshafiei sbarthelme bayes nmdang alexzeh fjanoos BrianTomasik MBFalcon soramame_0518 LanguageModeling ilps ADMiRes
	Test Procedures for a Class of Pattern-Sensitive Faults in Semiconductor Random-Access Memories [My Copy] Computers, IEEE Transactions on In Computers, IEEE Transactions on, Vol. C-29, No. 6. (1980), pp. 419-429. by D. S. Suk, S. M. Reddy posted to ser by ihaque on 2009-04-06 00:10:40 as
	Tutorial on semiconductor memory testing [My Copy] Journal of Electronic Testing, Vol. 5, No. 4. (1 November 1994), pp. 321-336. by B. F. Cockburn posted to ser by ihaque on 2009-04-06 00:10:16 as
	SRAM soft errors cause hard network problems [My Copy] EE Times (17 August 2001) by Anthony Cataldo posted to no-tag by ihaque on 2009-04-02 18:31:58 as
	Efficiency of Transient Bit-Flips Detection by Software Means: A Complete Study [My Copy] In DFT '03: Proceedings of the 18th IEEE International Symposium on Defect and Fault Tolerance in VLSI Systems (2003), 377. by B. Nicolescu, P. Peronnard, R. Velazco, Y. Savaria posted to ser by ihaque on 2009-04-02 18:30:49 as
	Effectiveness and limitations of various software techniques for "soft error" detection: a comparative study [My Copy] On-Line Testing Workshop, 2001. Proceedings. Seventh International In On-Line Testing Workshop, 2001. Proceedings. Seventh International (2001), pp. 172-177. by B. Nicolescu, R. Velazco, M. S. Reorda posted to ser by ihaque on 2009-04-02 18:30:09 as
	Dynamic prediction of architectural vulnerability from microarchitectural state [My Copy] In ISCA '07: Proceedings of the 34th annual international symposium on Computer architecture (2007), pp. 516-527. by Kristen R. Walcott, Greg Humphreys, Sudhanva Gurumurthi posted to ser by ihaque on 2009-04-02 18:29:15 as
	An Overview of the BlueGene/L Supercomputer [My Copy] Supercomputing, ACM/IEEE 2002 Conference (2002), pp. 60-60. by N. R. Adiga, G. Almasi, G. S. Almasi, et al.Y. Aridor, R. Barik, D. Beece, R. Bellofatto, G. Bhanot, R. Bickford, M. Blumrich, A. A. Bright, J. Brunheroto, C. Cascaval, J. Castanos, W. Chan, L. Ceze, P. Coteus, S. Chatterjee, D. Chen, G. Chiu, T. M. Cipolla, P. Crumley, K. M. Desai, A. Deutsch, T. Domany, M. B. Dombrowa, W. Donath, M. Eleftheriou, C. Erway, J. Esch, B. Fitch, J. Gagliano, A. Gara, R. Garg, R. Germain, M. E. Giampapa, B. Gopalsamy, J. Gunnels, M. Gupta, F. Gustavson, S. Hall, R. A. Haring, D. Heidel, P. Heidelberger, L. M. Herger, D. Hoenicke, R. D. Jackson, T. Jamal-Eddine, G. V. Kopcsay, E. Krevat, M. P. Kurhekar, A. P. Lanzetta, D. Lieber, L. K. Liu, M. Lu, M. Mendell, A. Misra, Y. Moatti, L. Mok, J. E. Moreira, B. J. Nathanson, M. Newton, M. Ohmacht, A. Oliner, V. Pandit, R. B. Pudota, R. Rand, R. Regan, B. Rubin, A. Ruehli, S. Rus, R. K. Sahoo, A. Sanomiya, E. Schenfeld, M. Sharma, E. Shmueli, S. Singh, P. Song, V. Srinivasan, B. D. Steinmacher-Burow, K. Strauss, C. Surovic, R. Swetz, T. Takken, R. B. Tremaine, M. Tsao, A. R. Umamaheshwaran, P. Verma, P. Vranas, T. J. C. Ward, M. Wazlowski, W. Barrett, C. Engel, B. Drehmel, B. Hilgart, D. Hill, F. Kasemkhani, D. Krolak, C. T. Li, T. Liebsch, J. Marcella, A. Muff, A. Okomo, M. Rouse, A. Schram, M. Tubbs, G. Ulsh, C. Wait, J. Wittrup, M. Bae, K. Dockser, L. Kissel, M. K. Seager, J. S. Vetter, K. Yates posted to no-tag by ihaque on 2009-04-02 18:28:32 as along with 1 person mthomure
	Single-event-upset and alpha-particle emission rate measurement techniques [My Copy] IBM Journal of Research and Development, Vol. 52, No. 3. (May 2008) by M. S. Gordon, K. P. Rodbell, D. F. Heidel, C. Cabral, E. H. Cannon, D. D. Reinhardt posted to ser by ihaque on 2009-04-02 18:27:32 as
	A New Hardware/Software Platform and a New 1/E Neutron Source for Soft Error Studies: Testing FPGAs at the ISIS Facility [My Copy] Nuclear Science, IEEE Transactions on In Nuclear Science, IEEE Transactions on, Vol. 54, No. 4. (2007), pp. 1184-1189. by M. Violante, L. Sterpone, A. Manuzzato, et al.S. Gerardin, P. Rech, M. Bagatin, A. Paccagnella, C. Andreani, G. Gorini, A. Pietropaolo, G. Cardarilli, S. Pontarelli, C. Frost posted to ser by ihaque on 2009-04-02 18:25:30 as
	Use of CF-252 to Determine Parameters for SEU Rate Calculation [My Copy] Nuclear Science, IEEE Transactions on In Nuclear Science, IEEE Transactions on, Vol. 32, No. 6. (1985), pp. 4282-4286. by J. T. Blandford, J. C. Pickel posted to ser by ihaque on 2009-04-02 18:24:58 as
	Self-Checking Detection and Diagnosis of Transient, Delay, and Crosstalk Faults Affecting Bus Lines [My Copy] IEEE Trans. Comput., Vol. 49, No. 6. (2000), pp. 560-574. by Cecilia Metra, Michele Favalli, Bruno Riccò posted to ser by ihaque on 2009-04-02 18:24:18 as
	Modeling the Effect of Technology Trends on the Soft Error Rate of Combinational Logic [My Copy] In DSN '02: Proceedings of the 2002 International Conference on Dependable Systems and Networks (2002), pp. 389-398. by Premkishore Shivakumar, Michael Kistler, Stephen W. Keckler, Doug Burger, Lorenzo Alvisi posted to ser by ihaque on 2009-04-02 18:23:37 as
	The Soft Error Problem: An Architectural Perspective [My Copy] In HPCA '05: Proceedings of the 11th International Symposium on High-Performance Computer Architecture (2005), pp. 243-247. by Shubhendu S. Mukherjee, Joel Emer, Steven K. Reinhardt posted to ser by ihaque on 2009-04-02 18:22:31 as
	Soft Errors in Electronic Memory - A White Paper [My Copy] http://www.tezzaron.com/about/papers/soft_errors_1_1_secure.pdf (5 January 2004) by Tezzaron Semiconductor posted to ser by ihaque on 2009-04-02 18:21:49 as
	Terrestrial cosmic rays [My Copy] IBM Journal of Research and Development, Vol. 40, No. 1. (1 January 1996) by J. F. Ziegler posted to ser by ihaque on 2009-04-02 18:18:36 as
	The impact of technology scaling on soft error rate performance and limits to the efficacy of error correction [My Copy] Electron Devices Meeting, 2002. IEDM '02. Digest. International In Electron Devices Meeting, 2002. IEDM '02. Digest. International (2002), pp. 329-332. by R. Baumann posted to ser by ihaque on 2009-04-02 18:16:14 as
	Accelerating molecular dynamic simulation on graphics processing units [My Copy] Journal of Computational Chemistry, Vol. 30, No. 6. (2009), pp. 864-872. by Mark S. Friedrichs, Peter Eastman, Vishal Vaidyanathan, et al.Mike Houston, Scott Legrand, Adam L. Beberg, Daniel L. Ensign, Christopher M. Bruns, Vijay S. Pande posted to gpu by ihaque on 2009-04-02 18:12:40 as along with 10 people and 3 groups anuragsethi kevinchannon flbarroso r2s2 iantunbridge sobolevnrm ruvido massivemayhem barry RamuAnandakrishnan baker-group structural_bioinformatics McCammon
	The visual vulnerability spectrum: characterizing architectural vulnerability for graphics hardware [My Copy] In GH '06: Proceedings of the 21st ACM SIGGRAPH/Eurographics symposium on Graphics hardware (2006), pp. 9-16. by Jeremy W. Sheaffer, David P. Luebke, Kevin Skadron posted to gpu by ihaque on 2009-02-08 04:46:55 as along with 1 person naoya
	A hardware redundancy and recovery mechanism for reliable scientific computation on graphics processors [My Copy] In GH '07: Proceedings of the 22nd ACM SIGGRAPH/EUROGRAPHICS symposium on Graphics hardware (2007), pp. 55-64. by Jeremy W. Sheaffer, David P. Luebke, Kevin Skadron posted to gpu by ihaque on 2009-02-08 04:16:10 as
	The Geometry of Shape Space: Application to Influenza [My Copy] Journal of Theoretical Biology, Vol. 212, No. 1. (7 September 2001), pp. 57-69. by A. Lapedes posted to rocs by ihaque on 2009-01-16 22:42:02 as along with 1 person VGreiff
	Multidimensional Scaling [My Copy] (15 January 1994) by Trevor F. Cox, Michael A. A. Cox posted to no-tag by ihaque on 2008-12-24 07:42:21 as
	A geodesic framework for analyzing molecular similarities. [My Copy] Journal of chemical information and computer sciences, Vol. 43, No. 2. (r 2003), pp. 475-484. by D. K. Agrafiotis, H. Xu posted to no-tag by ihaque on 2008-12-23 10:24:03 as along with 1 person pimmy
	Construction of positive definite matrices which are near to a given one [My Copy] Ukrainian Mathematical Journal, Vol. 26, No. 3. (1 May 1974), pp. 348-349. by T. A. Tsvetkova posted to no-tag by ihaque on 2008-12-19 05:11:44 as
	Assessing the accuracy of prediction algorithms for classification: an overview [My Copy] Bioinformatics, Vol. 16, No. 5. (1 May 2000), pp. 412-424. by Pierre Baldi, Soren Brunak, Yves Chauvin, Claus A. Andersen, Henrik Nielsen posted to machinelearning by ihaque on 2008-11-18 00:26:24 as along with 10 people and 1 group waghsk ucbcjbm MarcoAlvarez chad_davis eckart_bindewald skrofej girschick Evangelia wenhan sconlan MuraLab
	A Kinase-focused Compound Collection: Compilation and Screening Strategy [My Copy] Chemical Biology & Drug Design, Vol. 67, No. 6. (June 2006), pp. 385-394. by Dongyu Sun, Claudio Chuaqui, Zhan Deng, et al.Scott Bowes, Donovan Chin, Juswinder Singh, Patrick Cullen, Gretchen Hankins, Wen-Cherng Lee, Jason Donnelly, Jessica Friedman, Serene Josiah posted to rocs by ihaque on 2008-10-13 04:41:43 as
	Identification and characterization of a new cognitive enhancer based on inhibition of insulin-regulated aminopeptidase [My Copy] FASEB J. (20 August 2008), fj.08-112227. by Anthony L. Albiston, Craig J. Morton, Hooi L. Ng, et al.Vi Pham, Holly R. Yeatman, Siying Ye, Ruani N. Fernando, Dimitri De Bundel, David B. Ascher, Frederick A. Mendelsohn, Michael W. Parker, Siew Y. Chai posted to rocs by ihaque on 2008-10-13 04:36:53 as
	Molecular-modeling based design, synthesis, and activity of substituted piperidines as ?-secretase inhibitors [My Copy] Bioorganic & Medicinal Chemistry Letters, Vol. 15, No. 7. (01 April 2005), pp. 1891-1894. by E. Gundersen, K. Fan, K. Haas, et al.D. Huryn, Steven J. Jacobsen, A. Kreft, R. Martone, S. Mayer, J. Sonnenberg-Reines, S. Sun posted to rocs by ihaque on 2008-10-13 04:33:58 as
	Van der Waals Radii of Elements [My Copy] Inorganic Materials, Vol. 37, No. 9. (2001), pp. 871-885. by S. S. Batsanov posted to no-tag by ihaque on 2008-10-11 01:55:33 as
	van der Waals Volumes and Radii [My Copy] Journal of Physical Chemistry, Vol. 68, No. 3. (16 March 1964), pp. 441-451. by A. Bondi posted to no-tag by ihaque on 2008-10-11 00:36:39 as
	Managing bias in ROC curves. [My Copy] J Comput Aided Mol Des (7 February 2008) by Robert D. Clark, Daniel J. Webster-Clark posted to machinelearning by ihaque on 2008-10-05 02:51:04 as along with 1 person BragilMassoud
	Confidence Intervals for the Area under the ROC Curve [My Copy] In Advances in Neural Information Processing Systems (NIPS 2004), Vol. 17 (2005) by Corinna Cortes, Mehryar Mohri posted to machinelearning by ihaque on 2008-10-05 01:31:22 as
	Benchmarking Sets for Molecular Docking [My Copy] Journal of Medicinal Chemistry, Vol. 49, No. 23. (1 November 2006), pp. 6789-6801. by N. Huang, B. K. Shoichet, J. J. Irwin posted to dud by ihaque on 2008-10-04 22:47:11 as along with 4 people and 1 group GermanErlenkamp BragilMassoud yongzhao daevans TSRI_MGL
	Approximate Statistical Tests for Comparing Supervised Classification Learning Algorithms [My Copy] Neural Computation, Vol. 10 (1998), pp. 1895-1923. by Thomas G. Dietterich posted to machinelearning by ihaque on 2008-10-04 21:42:55 as along with 1 person gabriprat