inesdesantiago's Carninci:P [7 articles] Export Sort

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	Mammalian RNA polymerase II core promoters: insights from genome-wide studies. [My Copy] Nature reviews. Genetics, Vol. 8, No. 6. (08 June 2007), pp. 424-436. by Albin Sandelin, Piero Carninci, Boris Lenhard, Jasmina Ponjavic, Yoshihide Hayashizaki, David A. Hume posted to d-genome-organization by inesdesantiago on 2009-11-08 22:06:54 as along with 16 people and 3 groups isimpson megraw guhjy tonamswish maximilianh siebert rpatward Lauren_Jones agustinarce dchughes xiaobeizhao zwang cabbagezs cisevol GeeSharpMinor idonaldson G4ID Genetics-of-Gambling cis-regulatory-evolution
	Is sequencing enlightenment ending the dark age of the transcriptome? [My Copy] Nature Methods, Vol. 6, No. 10. (01 October 2009), pp. 711-713. by Piero Carninci posted to rna-seq-review by inesdesantiago on 2009-11-06 16:57:44 as along with 5 people heliopais n00c druvus megraw maren
	Tiny RNAs associated with transcription start sites in animals. [My Copy] Nature genetics, Vol. 41, No. 5. (19 May 2009), pp. 572-578. by Ryan J. Taft, Evgeny A. Glazov, Nicole Cloonan, et al.Cas Simons, Stuart Stephen, Geoffrey J. Faulkner, Timo Lassmann, Alistair R. Forrest, Sean M. Grimmond, Kate Schroder, Katharine Irvine, Takahiro Arakawa, Mari Nakamura, Atsutaka Kubosaki, Kengo Hayashida, Chika Kawazu, Mitsuyoshi Murata, Hiromi Nishiyori, Shiro Fukuda, Jun Kawai, Carsten O. Daub, David A. Hume, Harukazu Suzuki, Valerio Orlando, Piero Carninci, Yoshihide Hayashizaki, John S. Mattick posted to polymerase noncoding-rna chromatin-organization by inesdesantiago on 2009-10-03 01:21:21 as along with 15 people hzoltan guhjy jfr gdb xingxu fpattyn galka8_diploma tonamswish antonkratz mtagaya fenghezi ilyashl jbhiatt TRHvidsten natstreet
	The regulated retrotransposon transcriptome of mammalian cells [My Copy] Nature Genetics In Nat Genet, Vol. 41, No. 5. (19 April 2009), pp. 563-571. by Geoffrey J. Faulkner, Yasumasa Kimura, Carsten O. Daub, et al.Shivangi Wani, Charles Plessy, Katharine M. Irvine, Kate Schroder, Nicole Cloonan, Anita L. Steptoe, Timo Lassmann, Kazunori Waki, Nadine Hornig, Takahiro Arakawa, Hazuki Takahashi, Jun Kawai, Alistair R. R. Forrest, Harukazu Suzuki, Yoshihide Hayashizaki, David A. Hume, Valerio Orlando, Sean M. Grimmond, Piero Carninci posted to transposon by inesdesantiago on 2009-08-05 16:57:25 as along with 14 people and 2 groups hagechouchin443 guhjy gdb galka8_diploma tonamswish renatomilani cisevol robfsouza dchughes mtagaya fenghezi jbhiatt natstreet antonkratz cis-regulatory-evolution BergmanLab
	Methods for analyzing deep sequencing expression data: constructing the human and mouse promoterome with deepCAGE data [My Copy] Genome Biology, Vol. 10, No. 7. (22 July 2009), R79. by Piotr Balwierz, Piero Carninci, Carsten Daub, et al.Jun Kawai, Yoshihide Hayashizaki, Werner Van Belle, Christian Beisel, Erik van Nimwegen posted to analysis rna-seq by inesdesantiago on 2009-08-03 16:47:03 as along with 7 people vingron orzenil ptrobajo maximilianh djkt guhjy dolchan
	Genome-wide analysis of mammalian promoter architecture and evolution [My Copy] Nature Genetics In Nat Genet, Vol. 38, No. 6. (28 April 2006), pp. 626-635. by Piero Carninci, Albin Sandelin, Boris Lenhard, et al.Shintaro Katayama, Kazuro Shimokawa, Jasmina Ponjavic, Colin A. M. Semple, Martin S. Taylor, Par G. Engstrom, Martin C. Frith, Alistair R. R. Forrest, Wynand B. Alkema, Sin L. Tan, Charles Plessy, Rimantas Kodzius, Timothy Ravasi, Takeya Kasukawa, Shiro Fukuda, Mutsumi Kanamori-Katayama, Yayoi Kitazume, Hideya Kawaji, Chikatoshi Kai, Mari Nakamura, Hideaki Konno, Kenji Nakano, Salim Mottagui-Tabar, Peter Arner, Alessandra Chesi, Stefano Gustincich, Francesca Persichetti, Harukazu Suzuki, Sean M. Grimmond, Christine A. Wells, Valerio Orlando, Claes Wahlestedt, Edison T. Liu, Matthias Harbers, Jun Kawai, Vladimir B. Bajic, David A. Hume, Yoshihide Hayashizaki posted to evolution d-genome-organization cpg by inesdesantiago on 2009-03-30 10:21:22 as along with 20 people and 4 groups mamitamura rsaito guhjy antonkratz athma rpatward hagechouchin443 nklee djkt jfr xwbcn dchughes tabu samal nickluscombe xiaobeizhao cisevol eviledv gjuggler jasonflannick G4ID EBI-regulation Genetics-of-Gambling cis-regulatory-evolution
	A code for transcription initiation in mammalian genomes. [My Copy] Genome research, Vol. 18, No. 1. (21 January 2008), pp. 1-12. by M. C. Frith, E. Valen, A. Krogh, Y. Hayashizaki, P. Carninci, A. Sandelin posted to transcription-general by inesdesantiago on 2009-01-06 15:55:47 as along with 12 people megraw guhjy rpatward myrtilus dchughes cabbagezs maximilianh idonaldson oelemento gjuggler ohara gracio

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analysis	62
polycomb	36
wide_mapping	36
chip-seq	35
differentiation	35
polymerase	32
noncoding-rna	31
microrna	30
chromatin_factors	30
evolution	28
chromatin-review	27
bivalent	27
chromatin-organization	26
genome-organization	26
software	25
review	22
cpg	22
transcription-profile-stemcells	22
differentiation_factors	21
posttranscription	21
microarray	20
cancer	20
methylation	20
differentiation-review	20
nucleosome	19
methods	19
intron	18
replication	18
spatial-review	17
spatial-organization	15
prediction	15
imprinted-genes	15
splicing	14
correlations	14
splicing-review	14
d-polymerase	14
sequencing	14
reprograming	14
hox	12
polymerase-review	12
rna-seq	12
transcription-general	12
d-chromatin-organization	11
ubiquitylation	11
locus-position	11
xist	11
algorithm	11
oct4sox2nanog	10
polycomb-review	10
cell-division	10
repeats	10
therapy	10
cohesin	9
transcription-profile	9
allelic-specific	9
proteome	9
cryptic	9
replication-review	8
rna-seq-review	8
stochastic	7
cluster	7
go	7
reprograming_factors	7
dnabinding_factors	7
science	7
antisense	7
ctd	6
structure	6
coordination	6
transposon	6
transcription-assembly	6
territory	6
gmod	6
tissue-specific	6
nuclear_factors	6
dna_topology	6
aware	5
d-ctd	5
d-genome-organization	5
h3k56	5
chip-chip	5
h3k9	5
xist-review	5
gc	5
inheritance	4
h3k4	4
reprograming-review	4
isochores	4
cancer-review	4
methylation-review	4
d-esc	4
age	4
method	4
snp	4
rest	4
d-noncoding-rna	4
bursting	4
housekeeping	4
recombination	3
embryonic_stem_cells	3
modeling	3
wide_mapping-review	3
inheritance-review	3
rna_decay	3
hematopoiesis	3
plant	3
nucleosome-review	3
d-chip-seq	3
d-polycomb	3
h3k27	3
enhancers	3
intergenic	3
culture	3
encode	3
instability	3
dna_methylation	2
d-spatial	2
d-bivalent	2
d-transcription	2
stem-cell-notag	2
interchromosome-association	2
d-polycomb-review	2
d-polymerase-review	2
promoters	2
d-rna-seq	2
transcriptome-evolution	2
mono-allelic	2
elongation	2
d-prevasive	2
d-analysis	2
d-gene-structure	2
h3k36	2
insulators	2
mitochondria	2
myc	2
ptm	1
h3k79	1
chip-pet	1
hek27	1
d-cpg	1
p300	1
hiv	1
cdk7	1
d-spatial-review	1
d-translation	1
d-stem-cells	1
logistic-regression	1
gene-loop	1
pev	1
d-differentiation	1
d-methylation	1
ucsc	1
d-olymerase	1
h3s31	1
d-posttranscription	1
diff	1
transcriptome-general	1
transcription_factors	1
d-single-molucule-seq	1
introns	1
polymerase-structure	1
database	1
peak	1
spof	1
mitosis	1

inesdesantiago's Carninci:P [7 articles] Export Sort

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