inesdesantiago's analysis [62 articles] Export

Recent papers added to inesdesantiago's library classified by the tag analysis. You can also see everyone's analysis.

	Genome-wide Mapping of HATs and HDACs Reveals Distinct Functions in Active and Inactive Genes [My Copy] Cell, Vol. 138, No. 5. (04 September 2009), pp. 1019-1031. by Zhibin Wang, Chongzhi Zang, Kairong Cui, et al.Dustin E. Schones, Artem Barski, Weiqun Peng, Keji Zhao posted to wide_mapping polymerase d-chromatin-organization chromatin_factors analysis by inesdesantiago on 2009-11-09 03:25:11 as along with 2 people tonamswish dchughes
	Combinatorial binding predicts spatio-temporal cis-regulatory activity [My Copy] Nature, Vol. 462, No. 7269. (05 November 2009), pp. 65-70. by Robert P. Zinzen, Charles Girardot, Julien Gagneur, Martina Braun, Eileen E. M. Furlong posted to analysis by inesdesantiago on 2009-11-08 01:00:31 as along with 11 people cajunsushi emptyhb toszko roys fenghezi balabu iskathy djkt megraw TRHvidsten pedrobeltrao
	Efficiently finding genome-wide three-way gene interactions from transcript- and genotype-data [My Copy] Bioinformatics, Vol. 25, No. 21. (1 November 2009), pp. 2735-2743. by Mitsunori Kayano, Ichigaku Takigawa, Motoki Shiga, Koji Tsuda, Hiroshi Mamitsuka posted to logistic-regression analysis by inesdesantiago on 2009-11-08 00:24:26 as along with 8 people and 1 group operon daforerog klo kshameer dolchan kevinzheng1983 pkonings rdiaz 8_01
	Transcript quantification with RNA-Seq data [My Copy] BMC Bioinformatics, Vol. 10, No. Suppl 13. (19 October 2009), P5. by Regina Bohnert, Jonas Behr, Gunnar Ratsch posted to rna-seq analysis by inesdesantiago on 2009-11-06 16:30:48 as along with 3 people hzoltan jwfoley heliopais
	Unbiased Reconstruction of a Mammalian Transcriptional Network Mediating Pathogen Responses [My Copy] Science, Vol. 326, No. 5950. (9 October 2009), pp. 257-263. by Ido Amit, Manuel Garber, Nicolas Chevrier, et al.Ana P. Leite, Yoni Donner, Thomas Eisenhaure, Mitchell Guttman, Jennifer K. Grenier, Weibo Li, Or Zuk, Lisa A. Schubert, Brian Birditt, Tal Shay, Alon Goren, Xiaolan Zhang, Zachary Smith, Raquel Deering, Rebecca C. McDonald, Moran Cabili, Bradley E. Bernstein, John L. Rinn, Alex Meissner, David E. Root, Nir Hacohen, Aviv Regev posted to analysis by inesdesantiago on 2009-10-24 19:09:08 as along with 9 people xianjun leliavski TRHvidsten agonzale gbloeb roys ptrobajo natgoodman tmmurali
	Using reads to annotate the genome: influence of length, background distribution, and sequence errors on prediction capacity [My Copy] Nucl. Acids Res., Vol. 37, No. 15. (1 August 2009), e104. by Nicolas Philippe, Anthony Boureux, Laurent Brehelin, Jorma Tarhio, Therese Commes, Eric Rivals posted to chip-seq analysis by inesdesantiago on 2009-08-19 00:41:04 as along with 5 people fstrozzi sotacam jmcq guhjy xwbcn
	Genome-wide identification of DNA-protein interactions using chromatin immunoprecipitation coupled with flow cell sequencing. [My Copy] The Journal of endocrinology, Vol. 201, No. 1. (1 April 2009), pp. 1-13. by Brad G. Hoffman, Steven J. Jones posted to chip-seq analysis by inesdesantiago on 2009-08-19 00:40:44 as along with 3 people stubrown guhjy abizar
	Comparative study on ChIP-seq data: normalization and binding pattern characterization [My Copy] Bioinformatics, Vol. 25, No. 18. (15 September 2009), pp. 2334-2340. by Cenny Taslim, Jiejun Wu, Pearlly Yan, et al.Greg Singer, Jeffrey Parvin, Tim Huang, Shili Lin, Kun Huang posted to polymerase chip-seq analysis by inesdesantiago on 2009-08-19 00:22:19 as along with 8 people and 2 groups Stew tonamswish stubrown ewilban1 guhjy mkiyer humburg rschulz Bioinformatics - CRUK Chinnaiyan Lab
	Methods for analyzing deep sequencing expression data: constructing the human and mouse promoterome with deepCAGE data [My Copy] Genome Biology, Vol. 10, No. 7. (22 July 2009), R79. by Piotr Balwierz, Piero Carninci, Carsten Daub, et al.Jun Kawai, Yoshihide Hayashizaki, Werner Van Belle, Christian Beisel, Erik van Nimwegen posted to analysis rna-seq by inesdesantiago on 2009-08-03 16:47:03 as along with 7 people vingron orzenil ptrobajo maximilianh djkt guhjy dolchan
	Identifying Positioned Nucleosomes with Epigenetic Marks in Human from ChIP-Seq [My Copy] BMC Genomics, Vol. 9, No. 1. (2008), 537. by Yong Zhang, Hyunjin Shin, Jun Song, Ying Lei, X. Shirley Liu posted to analysis chip-seq by inesdesantiago on 2009-07-08 20:44:45 as along with 6 people antonkratz hagechouchin443 stubrown polivares idonaldson caseybrown
	Using quality scores and longer reads improves accuracy of Solexa read mapping [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (28 February 2008), 128. by Andrew Smith, Zhenyu Xuan, Michael Zhang posted to analysis chip-seq by inesdesantiago on 2009-07-08 20:22:56 as along with 18 people hzoltan seb1 heliopais bozdagd katholt n00c maren floatingpoint lukaswindhager natstreet druvus jfr pengchy farhat ghattem mdimon kmdaily caseybrown
	Mapping and quantifying mammalian transcriptomes by RNA-Seq. [My Copy] Nature methods, Vol. 5, No. 7. (30 July 2008), pp. 621-628. by Ali Mortazavi, Brian A. Williams, Kenneth McCue, Lorian Schaeffer, Barbara Wold posted to software rna-seq aware analysis by inesdesantiago on 2009-07-08 20:15:08 as along with 42 people and 2 groups manduca cthachuk hzoltan jwfoley heliopais juokcho aktas debasis bertelsen idonaldson darian stubrown dswan ewilban1 mtagaya woodson8 burak jonilaserson ThomasDOtto n00c GustavoG ghattem vplagnol druvus cfvillalta vmsr poschm dandaman shikin jmcq rschulz lp2 tmcphillips jfr myourshaw megraw GeeSharpMinor caseybrown xingxu guhjy shurjo gdb Bioinformatics SIMR bioinformatics
	Evaluation of next generation sequencing platforms for population targeted sequencing studies [My Copy] Genome Biology, Vol. 10, No. 3. (2009), R32. by Olivier Harismendy, Pauline Ng, Robert Strausberg, et al.Xiaoyun Wang, Timothy Stockwell, Karen Beeson, Nicholas Schork, Sarah Murray, Eric Topol, Samuel Levy, Kelly Frazer posted to analysis chip-seq by inesdesantiago on 2009-07-03 15:36:32 as along with 24 people and 2 groups jfr hzoltan dbensasson GustavoLacerda adijr agbiotec jgill darian jandot n00c jonilaserson maren mlog ppgardne kiekyon michaelbarton idoerg stajich skembel giovanni druvus lwaldron djkt natstreet Journal picks Mycology
	Seeing the forest for the trees: using the Gene Ontology to restructure hierarchical clustering [My Copy] Bioinformatics, Vol. 25, No. 14. (15 July 2009), pp. 1789-1795. by Dikla Dotan-Cohen, Simon Kasif, Avraham A. Melkman posted to analysis cluster go by inesdesantiago on 2009-07-03 15:03:15 as along with 2 people and 1 group ollieredfernwork phoenixzxl Orengo Group Journal Picks
	Fast and accurate short read alignment with Burrows-Wheeler transform. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 14. (15 July 2009), pp. 1754-1760. by Heng Li, Richard Durbin posted to algorithm analysis chip-seq by inesdesantiago on 2009-07-03 14:26:33 as along with 33 people and 4 groups lianping hzoltan cthachuk maren bozdagd adijr heliopais jmanning2k GustavoLacerda stubrown jessopher guhjy katholt mkiyer jmcq idonaldson michaelbarton polivares darian orzenil cassj TRHvidsten djkt operon ghattem n00c danmaclean ppgardne nuin rschulz natstreet druvus humburg BergmanLab SIMR bioinformatics Bioinformatics Journal picks
	Hierarchical hidden Markov model with application to joint analysis of ChIP-chip and ChIP-seq data. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 14. (15 July 2009), pp. 1715-1721. by Hyungwon Choi, Alexey I. Nesvizhskii, Debashis Ghosh, Zhaohui S. Qin posted to analysis chip-chip chip-seq by inesdesantiago on 2009-07-03 14:23:38 as along with 12 people and 1 group jfr tonamswish rdiaz fpattyn jcbarret guhjy hendrik85 nklee polivares ewilban1 idonaldson humburg Journal picks
	A clustering approach for identification of enriched domains from histone modification ChIP-Seq data [My Copy] Bioinformatics, Vol. 25, No. 15. (1 August 2009), pp. 1952-1958. by Chongzhi Zang, Dustin E. Schones, Chen Zeng, Kairong Cui, Keji Zhao, Weiqun Peng posted to cluster chip-seq analysis by inesdesantiago on 2009-07-03 14:17:05 as along with 12 people and 2 groups hzoltan hagechouchin443 ashraya stubrown cassj guhjy humburg ewilban1 gdb fenghezi ghattem polivares SIMR bioinformatics BergmanLab
	Genome assembly reborn: recent computational challenges [My Copy] Brief Bioinform, Vol. 10, No. 4. (1 July 2009), pp. 354-366. by Mihai Pop posted to analysis chip-seq by inesdesantiago on 2009-06-29 13:56:42 as along with 30 people and 1 group jfr hzoltan cthachuk GustavoLacerda n00c agbiotec shabhonam pachorip APRegier jmcq stevebs jonilaserson michaelbarton GeeSharpMinor bertelsen aprasad ananta_samudra sandfire jmeppley mlangill fgibson ppgardne TRHvidsten pengchy robsyme nuin kiekyon natstreet druvus idoerg Journal picks
	Extracting transcription factor targets from ChIP-Seq data [My Copy] Nucl. Acids Res., Vol. 37, No. 17. (1 September 2009), e113. by Geetu Tuteja, Peter White, Jonathan Schug, Klaus H. Kaestner posted to peak chip-seq analysis algorithm by inesdesantiago on 2009-06-29 12:31:47 as along with 14 people and 4 groups hzoltan Vincent_Rouilly mfgreen ewilban1 idonaldson guhjy mkiyer rschulz fenghezi clearbluespring thegoose robeirne malcook polivares Chinnaiyan Lab SIMR bioinformatics BergmanLab Journal picks
	F-Seq: a feature density estimator for high-throughput sequence tags [My Copy] Bioinformatics, Vol. 24, No. 21. (1 November 2008), pp. 2537-2538. by Alan P. Boyle, Justin Guinney, Gregory E. Crawford, Terrence S. Furey posted to algorithm analysis chip-seq by inesdesantiago on 2009-06-23 18:53:27 as along with 18 people and 2 groups hzoltan n00c darian idonaldson michaelbarton gdb ewilban1 tonamswish guhjy kmdaily cassj fhalbrit jfr rschulz polivares cthachuk zhouyu aprasad JLab BergmanLab
	Amplification-free Illumina sequencing-library preparation facilitates improved mapping and assembly of (G+C)-biased genomes [My Copy] Nat Meth, Vol. 6, No. 4. (15 March 2009), pp. 291-295. by Iwanka Kozarewa, Zemin Ning, Michael A. Quail, Mandy J. Sanders, Matthew Berriman, Daniel J. Turner posted to analysis chip-seq by inesdesantiago on 2009-06-13 01:51:52 as along with 6 people mkiyer guhjy natstreet athma druvus jbhiatt
	Using ChIP-chip and ChIP-seq to study the regulation of gene expression: genome-wide localization studies reveal widespread regulation of transcription elongation. [My Copy] Methods (San Diego, Calif.), Vol. 48, No. 4. (9 August 2009), pp. 398-408. by Daniel A. Gilchrist, David C. Fargo, Karen Adelman posted to analysis chip-seq polymerase by inesdesantiago on 2009-05-26 13:22:59 as along with 5 people fpattyn ewilban1 guhjy sebastien_vigneau idonaldson
	Co-evolutionary networks of genes and cellular processes across fungal species [My Copy] Genome Biology, Vol. 10, No. 5. (2009), R48. by Tamir Tuller, Martin Kupiec, Eytan Ruppin posted to analysis cluster by inesdesantiago on 2009-05-26 12:49:29 as along with 5 people kiekyon roys grahamc dokky michaelbarton
	CIT: A Cluster Identification Tool based on Biclustering and Hierarchical Clustering [My Copy] J Proteomics Bioinform, Vol. 2 (16 May 2009), pp. 222-225. by T. Hussain, A. Mazhar, Ammad-Ud-Din, A. Mir posted to analysis cluster by inesdesantiago on 2009-05-26 12:47:27 as
	Empirical methods for controlling false positives and estimating confidence in ChIP-Seq peaks [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (2008), 523. by David Nix, Samir Courdy, Kenneth Boucher posted to analysis chip-seq by inesdesantiago on 2009-05-25 12:38:28 as along with 9 people and 2 groups darian gdb slv23 ewilban1 floatingpoint WanderingAengus magusina ghattem caseybrown Bioinformatics - CRUK SIMR bioinformatics
	Hyperbolic SOM-based clustering of DNA fragment features for taxonomic visualization and classification [My Copy] Bioinformatics, Vol. 24, No. 14. (15 July 2008), pp. 1568-1574. by Christian Martin, Naryttza N. Diaz, Jorg Ontrup, Tim W. Nattkemper posted to analysis cluster by inesdesantiago on 2009-05-22 17:45:04 as along with 2 people dakelley nklee
	Visualising very large phylogenetic trees in three dimensional hyperbolic space. [My Copy] BMC Bioinformatics, Vol. 5 (29 April 2004) by T. Hughes, Y. Hyun, D. A. Liberles posted to analysis cluster by inesdesantiago on 2009-05-22 16:02:21 as along with 3 people underthesun bpb jmeppley
	How to map billions of short reads onto genomes [My Copy] Nature Biotechnology, Vol. 27, No. 5. (01 May 2009), pp. 455-457. by Cole Trapnell, Steven L. Salzberg posted to analysis chip-seq by inesdesantiago on 2009-05-12 11:01:48 as along with 28 people and 5 groups cthachuk hzoltan tonamswish heliopais giovenko jfr torfinnnome daforerog jonilaserson mkiyer Annab darian polivares ghattem kiekyon n00c GeeSharpMinor guhjy nuin reyez orzenil Thaverkamp natstreet druvus fenghezi Stew idonaldson neils Bioinformatics Chinnaiyan Lab BergmanLab SIMR bioinformatics Bioinformatics - CRUK
	A global view of gene activity and alternative splicing by deep sequencing of the human transcriptome. [My Copy] Science (New York, N.Y.), Vol. 321, No. 5891. (15 August 2008), pp. 956-960. by M. Sultan, M. H. Schulz, H. Richard, et al.A. Magen, A. Klingenhoff, M. Scherf, M. Seifert, T. Borodina, A. Soldatov, D. Parkhomchuk, D. Schmidt, S. O'Keeffe, S. Haas, M. Vingron, H. Lehrach, M. L. Yaspo posted to analysis chip-seq rna-seq by inesdesantiago on 2009-05-12 07:53:24 as along with 28 people and 2 groups hzoltan zufar eszczurek n00c dna ilyashl TRHvidsten poschm bertelsen ivanek guhjy wutongbin jfr raistrick gracio xingxu psique oelemento Ema reyez caseybrown kjglennie dh0000 GeeSharpMinor balicea djkt ArtemPankin zwang BenosLab Khavkin's lab
	Visualization of genomic data with the Hilbert curve [My Copy] Bioinformatics, Vol. 25, No. 10. (15 May 2009), pp. 1231-1235. by Simon Anders posted to analysis chip-seq by inesdesantiago on 2009-05-10 09:54:40 as along with 14 people and 1 group jfr jandot ewilban1 polivares djkt behindtherabbit guhjy humburg Thaverkamp svenrahmann jmeppley idonaldson rdiaz paszkows BergmanLab
	A kernel-based integration of genome-wide data for clinical decision support. [My Copy] Genome medicine, Vol. 1, No. 4. (3 April 2009) by Anneleen Daemen, Olivier Gevaert, Fabian Ojeda, et al.Annelies Debucquoy, Johan Ak A. Suykens, Christine Sempoux, Jean-Pascal P. Machiels, Karin Haustermans, Bart De Moor posted to analysis correlations by inesdesantiago on 2009-04-19 01:23:13 as along with 4 people installe nicklynch daed frohike
	A meta-analysis of microarray gene expression in mouse stem cells: redefining stemness. [My Copy] PloS one, Vol. 3, No. 7. (16 July 2008), e2712. by Y. J. Edwards, K. Bryson, D. T. Jones posted to analysis transcription-profile-stemcells by inesdesantiago on 2009-04-01 17:19:39 as along with 1 person daforerog
	Model-based redesign of global transcription regulation [My Copy] Nucl. Acids Res., Vol. 37, No. 5. (1 April 2009), e38. by Javier Carrera, Guillermo Rodrigo, Alfonso Jaramillo posted to analysis modeling transcription-profile by inesdesantiago on 2009-03-22 14:42:36 as along with 2 people TRHvidsten Synthetic_Biology_Literature
	The relationship between DNA replication and human genome organization [My Copy] Mol Biol Evol (6 January 2009), msn303. by Anamaria Necsulea, Claire Guillet, Jean-Charles Cadoret, Marie-Noelle Prioleau, Laurent Duret posted to analysis correlations genome-organization replication by inesdesantiago on 2009-03-22 14:20:33 as along with 4 people and 2 groups daveGerrard maximilianh djkt cisevol BergmanLab JLab
	PeakSeq enables systematic scoring of ChIP-seq experiments relative to controls. [My Copy] Nature biotechnology, Vol. 27, No. 1. (04 January 2009), pp. 66-75. by Joel Rozowsky, Ghia Euskirchen, Raymond K. Auerbach, et al.Zhengdong D. Zhang, Theodore Gibson, Robert Bjornson, Nicholas Carriero, Michael Snyder, Mark B. Gerstein posted to analysis chip-seq software by inesdesantiago on 2009-01-30 11:21:25 as along with 18 people and 1 group hzoltan fpattyn gdb huali ewilban1 fenghezi smiddha jfr bertelsen JeremyZucker cassj dakelley ghattem abizar polivares idonaldson WanderingAengus guhjy SIMR bioinformatics
	Design and analysis of ChIP-seq experiments for DNA-binding proteins. [My Copy] Nature biotechnology, Vol. 26, No. 12. (16 December 2008), pp. 1351-1359. by Peter V. Kharchenko, Michael Y. Tolstorukov, Peter J. Park posted to analysis chip-seq methods by inesdesantiago on 2009-01-30 11:20:12 as along with 19 people and 2 groups hzoltan stubrown guhjy gdb tonamswish ewilban1 coela ekotelnikova jfr floatingpoint idonaldson WanderingAengus vplagnol xwbcn fpattyn mutagenic kengg rschulz ghattem KCL & UCL Bioinformatics SIMR bioinformatics
	Repeatability of published microarray gene expression analyses [My Copy] Nature Genetics, Vol. 41, No. 2. (28 January 2008), pp. 149-155. by John P. A. Ioannidis, David B. Allison, Catherine A. Ball, et al.Issa Coulibaly, Xiangqin Cui, Aedin C. Culhane, Mario Falchi, Cesare Furlanello, Laurence Game, Giuseppe Jurman, Jon Mangion, Tapan Mehta, Michael Nitzberg, Grier P. Page, Enrico Petretto, Vera van Noort posted to analysis microarray by inesdesantiago on 2009-01-30 11:14:32 as along with 21 people and 1 group hzoltan heliopais ericrpaquet guhjy greg frohike TRHvidsten giovenko jfr rdiaz zufar ptrobajo floatingpoint felsani nuin daforerog cabbagesofdoom dswan Zephyrus djkt paszkows Roswell Cancer Crosstalk
	Chromatin Signatures in Multipotent Human Hematopoietic Stem Cells Indicate the Fate of Bivalent Genes during Differentiation [My Copy] Cell Stem Cell, Vol. 4, No. 1. (09 January 2009), pp. 80-93. by K. Cui, C. Zang, T. Roh, et al.D. Schones, R. Childs, W. Peng, K. Zhao posted to analysis bivalent hematopoiesis by inesdesantiago on 2009-01-14 12:06:03 as along with 2 people tonamswish WanderingAengus
	Nascent RNA Sequencing Reveals Widespread Pausing and Divergent Initiation at Human Promoters [My Copy] Science, Vol. 322, No. 5909. (19 December 2008), pp. 1845-1848. by Leighton J. Core, Joshua J. Waterfall, John T. Lis posted to polymerase antisense analysis by inesdesantiago on 2009-01-06 11:41:20 as along with 13 people and 1 group hagechouchin443 gdb caseybrown sebastien_vigneau bpcusack skoch3 djkt strands Glires lp2 sandersl diaz0058 jbhiatt Koch_Lab
	A comprehensive functional analysis of tissue specificity of human gene expression. [My Copy] BMC biology, Vol. 6, No. 1. (2008) by Z. Dezso, Y. Nikolsky, E. Sviridov, et al.W. Shi, T. Serebriyskaya, D. Dosymbekov, A. Bugrim, E. Rakhmatulin, R. J. Brennan, A. Guryanov, K. Li, J. Blake, R. R. Samaha, T. Nikolskaya posted to analysis go housekeeping tissue-specific by inesdesantiago on 2008-12-04 11:33:03 as along with 8 people and 1 group dolchan grahamc shikin jfr guhjy acanario imina GeeSharpMinor GeneGo
	Tissue-specific splicing factor gene expression signatures [My Copy] Nucl. Acids Res. (24 July 2008), gkn463. by Ana R. Grosso, Anita Q. Gomes, Nuno L. Barbosa-Morais, et al.Sandra Caldeira, Natalie P. Thorne, Godfrey Grech, Marieke von Lindern, Maria Carmo-Fonseca posted to analysis noncoding-rna snp splicing tissue-specific by inesdesantiago on 2008-11-25 15:06:37 as along with 3 people jfr cajunsushi aconesa
	Analysis of the mouse embryonic stem cell regulatory networks obtained by ChIP-chip and ChIP-PET [My Copy] Genome Biology, Vol. 9 (13 August 2008), R126. by Divya Mathur, Timothy W. Danford, Laurie A. Boyer, Richard A. Young, David K. Gifford, Rudolf Jaenisch posted to analysis chip-chip oct4sox2nanog by inesdesantiago on 2008-11-25 14:59:30 as along with 1 person ajbattle
	Substantial biases in ultra-short read data sets from high-throughput DNA sequencing [My Copy] Nucl. Acids Res., Vol. 36, No. 16. (1 September 2008), e105. by Juliane C. Dohm, Claudio Lottaz, Tatiana Borodina, Heinz Himmelbauer posted to analysis chip-seq by inesdesantiago on 2008-11-25 14:48:35 as along with 18 people and 1 group hzoltan jonilaserson n00c druvus orzenil burak woodson8 sameersoi humburg poschm polivares Huub_odc usagi-kirin jfr natstreet dakelley caseybrown GustavoLacerda microbiology_nijmegen
	ChromaSig: A Probabilistic Approach to Finding Common Chromatin Signatures in the Human Genome [My Copy] PLoS Comput Biol, Vol. 4, No. 10. (17 October 2008), e1000201. by Gary Hon, Bing Ren, Wei Wang posted to algorithm analysis chip-seq correlations by inesdesantiago on 2008-11-21 15:58:15 as along with 6 people darian sebastien_vigneau ewilban1 guhjy magusina djkt
	The Genome Browser at UCSC for Locating Genes, and Much More! [My Copy] Mol Biotechnol (4 December 2007) by Minou Bina posted to analysis ucsc by inesdesantiago on 2008-10-29 23:00:58 as along with 1 person guhjy
	Using Semantic Web Tools to Integrate Experimental Measurement Data on Our Own Terms [My Copy] On the Move to Meaningful Internet Systems 2006: OTM 2006 Workshops (2006), pp. 679-688. by M. Marshall, Lennart Post, Marco Roos, Timo Breit posted to analysis by inesdesantiago on 2008-10-28 01:32:00 as along with 2 people and 1 group dansullivanblk mroos AID
	Automated Querying of Genome Databases [My Copy] PLoS Computational Biology, Vol. 3, No. 1. (1 January 2007), e1. by Peter Schattner posted to analysis by inesdesantiago on 2008-10-28 01:02:51 as along with 11 people and 1 group natstreet bertelsen urgi daforerog polivares giovenko druvus cisevol guhjy jfr Ayest BergmanLab
	Genome Annotation [My Copy] Bioinformatics (2008), pp. 125-139. by Hideya Kawaji, Yoshihide Hayashizaki posted to analysis by inesdesantiago on 2008-10-28 00:54:20 as along with 1 person Thaverkamp
	Advanced Genomic Data Mining [My Copy] PLoS Comput Biol, Vol. 4, No. 9. (2008), e1000121. by Xosé M. Fernández-Suárez, Ewan Birney posted to analysis by inesdesantiago on 2008-10-28 00:21:29 as along with 19 people and 1 group Zephyrus mhamada daforerog kshameer jfr guhjy taguchi giovenko usagi-kirin fgibson cisevol rdiaz aramesh2 sunhwan druvus mitko jandot jameswasmuth dullhunk BergmanLab
	The generation and utilization of a cancer-oriented representation of the human transcriptome by using expressed sequence tags [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 100, No. 23. (11 November 2003), pp. 13418-13423. by Helena Brentani, Otávia L. Caballero, Anamaria A. Camargo, et al.Aline M. da Silva, Wilson A. da Silva, Emmanuel D. Neto, Marco Grivet, Arthur Gruber, Pedro E. Guimaraes, Winston Hide, Christian Iseli, C. Victor Jongeneel, Janet Kelso, Maria A. Nagai, Elida P. Ojopi, Elisson C. Osorio, Eduardo M. R. Reis, Gregory J. Riggins, Andrew J. Simpson, Sandro de Souza, Brian J. Stevenson, Robert L. Strausberg, Eloiza H. Tajara, Sergio Verjovski-Almeida posted to analysis cancer by inesdesantiago on 2008-10-28 00:16:46 as along with 1 person ajholanda

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analysis	62
polycomb	36
wide_mapping	36
chip-seq	35
differentiation	35
noncoding-rna	31
polymerase	31
chromatin_factors	30
microrna	30
evolution	28
bivalent	27
chromatin-review	27
chromatin-organization	26
genome-organization	26
software	25
cpg	22
review	22
transcription-profile-stemcells	22
differentiation_factors	21
posttranscription	21
cancer	20
differentiation-review	20
methylation	20
microarray	20
methods	19
nucleosome	19
intron	18
replication	18
spatial-review	17
imprinted-genes	15
prediction	15
spatial-organization	15
correlations	14
d-polymerase	14
reprograming	14
sequencing	14
splicing	14
splicing-review	14
hox	12
polymerase-review	12
rna-seq	12
transcription-general	12
algorithm	11
locus-position	11
ubiquitylation	11
xist	11
cell-division	10
d-chromatin-organization	10
oct4sox2nanog	10
polycomb-review	10
repeats	10
therapy	10
allelic-specific	9
cohesin	9
cryptic	9
proteome	9
transcription-profile	9
replication-review	8
rna-seq-review	8
antisense	7
cluster	7
dnabinding_factors	7
go	7
reprograming_factors	7
science	7
stochastic	7
coordination	6
ctd	6
dna_topology	6
gmod	6
nuclear_factors	6
structure	6
territory	6
tissue-specific	6
transcription-assembly	6
transposon	6
aware	5
chip-chip	5
d-genome-organization	5
gc	5
h3k56	5
h3k9	5
xist-review	5
age	4
bursting	4
cancer-review	4
d-ctd	4
d-noncoding-rna	4
h3k4	4
housekeeping	4
inheritance	4
isochores	4
method	4
methylation-review	4
reprograming-review	4
rest	4
snp	4
culture	3
d-chip-seq	3
d-esc	3
d-polycomb	3
embryonic_stem_cells	3
encode	3
enhancers	3
h3k27	3
hematopoiesis	3
inheritance-review	3
instability	3
intergenic	3
modeling	3
nucleosome-review	3
plant	3
recombination	3
rna_decay	3
wide_mapping-review	3
d-analysis	2
d-bivalent	2
d-gene-structure	2
dna_methylation	2
d-polymerase-review	2
d-prevasive	2
d-rna-seq	2
d-spatial	2
elongation	2
h3k36	2
insulators	2
interchromosome-association	2
mitochondria	2
myc	2
promoters	2
stem-cell-notag	2
transcriptome-evolution	2
cdk7	1
chip-pet	1
database	1
d-differentiation	1
diff	1
d-methylation	1
d-olymerase	1
d-polycomb-review	1
d-posttranscription	1
d-single-molucule-seq	1
d-spatial-review	1
d-stem-cells	1
d-transcription	1
d-translation	1
gene-loop	1
h3k79	1
h3s31	1
hek27	1
hiv	1
introns	1
logistic-regression	1
mitosis	1
mono-allelic	1
peak	1
pev	1
ptm	1
spof	1
transcription_factors	1
transcriptome-general	1
ucsc	1

inesdesantiago's analysis [62 articles] Export

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