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	Using RSAT to scan genome sequences for transcription factor binding sites and cis-regulatory modules. [My Copy] Nature protocols, Vol. 3, No. 10. (18 September 2008), pp. 1578-1588. by Jean-Valery V. Turatsinze, Morgane Thomas-Chollier, Matthieu Defrance, Jacques van Helden posted to tools tfbs prediction cis-regulatory-element by isimpson on 2009-11-16 15:33:35 as along with 7 people and 1 group kshameer heliopais druvus fhsantanna polivares idonaldson natstreet BergmanLab
	Analyzing multiple data sets by interconnecting RSAT programs via SOAP Web services: an example with ChIP-chip data. [My Copy] Nature protocols, Vol. 3, No. 10. (18 September 2008), pp. 1604-1615. by Olivier Sand, Morgane Thomas-Chollier, Eric Vervisch, Jacques van Helden posted to web-services tfbs soap prediction cis-regulatory-element by isimpson on 2009-11-16 15:32:06 as along with 2 people and 1 group druvus polivares BergmanLab
	Motif-Blind, Genome-Wide Discovery of cis-Regulatory Modules in Drosophila and Mouse [My Copy] Vol. 17, No. 4. (20 October 2009), pp. 568-579. by Miriam R. Kantorovitz, Majid Kazemian, Sarah Kinston, et al.Diego Miranda-Saavedra, Qiyun Zhu, Gene E. Robinson, Berthold Göttgens, Marc S. Halfon, Saurabh Sinha posted to tools tfbs prediction motifs motif-discovery algorithm by isimpson on 2009-10-27 14:16:21 as along with 1 person and 1 group daveGerrard BergmanLab
	Identifying Cis-Regulatory Sequences by Word Profile Similarity [My Copy] PLoS ONE, Vol. 4, No. 9. (4 September 2009), e6901. by Garmay Leung, Michael B. Eisen posted to tfbs software prediction must-read cis-regulatory-element by isimpson on 2009-09-17 14:51:07 as along with 1 person and 1 group daveGerrard BergmanLab
	Pscan: finding over-represented transcription factor binding site motifs in sequences from co-regulated or co-expressed genes [My Copy] Nucl. Acids Res. In Nucl. Acids Res., Vol. 37, No. suppl_2. (1 July 2009), pp. W247-252. by Federico Zambelli, Graziano Pesole, Giulio Pavesi posted to motif-discovery motifs prediction software tfbs transcription-factor by isimpson on 2009-06-04 12:11:40 as along with 6 people bsamal druvus natstreet idonaldson nklee nuin
	DBD: a transcription factor prediction database. [My Copy] Nucleic Acids Res, Vol. 34, No. Database issue. (1 January 2006) by S. K. Kummerfeld, S. A. Teichmann posted to database must-read prediction transcription-factor by isimpson on 2009-02-06 09:36:20 as along with 6 people and 1 group troels_marstrand gpalidwor nickluscombe nklee mariakmejia natstreet EBI-regulation
	Computational identification of site-specific transcription factors in Drosophila. [My Copy] Fly, Vol. 1, No. 3. (n 2007), pp. 142-145. by B. Adryan, S. A. Teichmann posted to database must-read prediction transcription-factor by isimpson on 2009-02-06 09:35:19 as
	Predicting expression patterns from regulatory sequence in Drosophila segmentation [My Copy] Nature, Vol. 451, No. 7178. (02 January 2008), pp. 535-540. by Eran Segal, Tali Raveh-Sadka, Mark Schroeder, Ulrich Unnerstall, Ulrike Gaul posted to must-read prediction tfbs transcription-regulation by isimpson on 2008-09-16 15:24:31 as along with 19 people and 2 groups TRHvidsten daveGerrard koller dlmace ptrobajo dakelley tmmurali eckart_bindewald djkt bootsy biomcgary idonaldson roys emptyhb pkharchenko meiklej jrest tresch siebert BergmanLab TranscriptionalRegulationWithThermodynamicModels
	GIMSAN: A Gibbs motif finder with significance analysis [My Copy] Bioinformatics (14 August 2008), btn408. by Patrick Ng, Uri Keich posted to algorithm must-read prediction tfbs by isimpson on 2008-08-15 11:02:24 as
	Identification of functional clusters of transcription factor binding motifs in genome sequences: the MSCAN algorithm. [My Copy] Bioinformatics, Vol. 19 Suppl 1 (2003) by O. Johansson, W. Alkema, W. W. Wasserman, J. Lagergren posted to prediction tfbs by isimpson on 2008-08-14 10:19:35 as along with 2 people and 1 group indigoviolet xili03 EisenLab
	Applied bioinformatics for the identification of regulatory elements. [My Copy] Nat Rev Genet, Vol. 5, No. 4. (April 2004), pp. 276-287. by W. W. Wasserman, A. Sandelin posted to prediction tfbs by isimpson on 2008-08-14 10:18:46 as along with 19 people and 8 groups bsamal wowalz yas icases ana chad_davis moborg gpalidwor dchughes nickluscombe johncumbers giovanni xiaobeizhao bertelsen Stew nklee jdiezperezj ArtemPankin mariakmejia structural_bioinformatics Bioinformatics EisenLab G4ID EBI-regulation GeschwindLab TNT Genetics-of-Gambling
	Target Explorer: An automated tool for the identification of new target genes for a specified set of transcription factors. [My Copy] Nucleic acids research, Vol. 31, No. 13. (1 July 2003), pp. 3589-3592. by A. Sosinsky, C. P. Bonin, R. S. Mann, B. Honig posted to prediction software tfbs transcription-regulation by isimpson on 2008-08-13 13:12:54 as along with 2 people wenhan oelemento

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isimpson's prediction [12 articles] Export Sort

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