j3xucite's folding [18 articles] Export

Recent papers added to j3xucite's library classified by the tag folding. You can also see everyone's folding.

	Protein folding by a biased Monte Carlo procedure in the dihedral angle space. [My Copy] FASEB J, Vol. 10, No. 1. (January 1996), pp. 119-125. by B. Lee, N. Kurochkina, H. S. Kang posted to folding protein by j3xucite on 2008-02-23 03:31:25 as
	A backbone-based theory of protein folding [My Copy] Proceedings of the National Academy of Sciences, Vol. 103, No. 45. (7 November 2006), pp. 16623-16633. by George D. Rose, Patrick J. Fleming, Jayanth R. Banavar, Amos Maritan posted to folding protein by j3xucite on 2008-02-18 19:29:45 as along with 7 people carlosjavierna flbarroso edws dkoveal thaliana choonpeng marck
	Propensities, probabilities, and the Boltzmann hypothesis [My Copy] Protein Sci, Vol. 12, No. 6. (1 June 2003), pp. 1298-1302. by David Shortle posted to folding protein by j3xucite on 2008-01-25 05:28:14 as
	A simplified representation of protein conformations for rapid simulation of protein folding [My Copy] Journal of Molecular Biology, Vol. 104 (1976), pp. 59-107. by M. Levitt posted to folding protein by j3xucite on 2008-01-14 02:21:59 as
	Ab initio construction of protein tertiary structures using a hierarchical approach. [My Copy] J Mol Biol, Vol. 300, No. 1. (30 June 2000), pp. 171-185. by Y. Xia, E. S. Huang, M. Levitt, R. Samudrala posted to folding protein by j3xucite on 2008-01-11 02:45:22 as along with 1 person aengisch
	A Novel Approach to Decoy Set Generation: Designing a Physical Energy Function Having Local Minima with Native Structure Characteristics [My Copy] Journal of Molecular Biology, Vol. 329, No. 1. (23 May 2003), pp. 159-174. by Chen Keasar, Michael Levitt posted to folding protein by j3xucite on 2007-12-21 18:06:39 as
	A hidden markov model derived structural alphabet for proteins. [My Copy] J Mol Biol, Vol. 339, No. 3. (4 June 2004), pp. 591-605. by A. C. Camproux, R. Gautier, P. Tufféry posted to folding protein by j3xucite on 2007-09-26 22:22:22 as
	Sampling Realistic Protein Conformations Using Local Structural Bias. [My Copy] PLoS Comput Biol, Vol. 2, No. 9. (22 September 2006) by Thomas Hamelryck, John T T. Kent, Anders Krogh posted to folding protein by j3xucite on 2007-09-13 22:34:57 as along with 3 people xingwuliu wouterboomsma hmk
	Helix, sheet, and polyproline II frequencies and strong nearest neighbor effects in a restricted coil library. [My Copy] Biochemistry, Vol. 44, No. 28. (19 July 2005), pp. 9691-9702. by A. K. Jha, A. Colubri, M. H. Zaman, S. Koide, T. R. Sosnick, K. F. Freed posted to folding protein by j3xucite on 2007-09-13 22:31:13 as
	Minimalist representations and the importance of nearest neighbor effects in protein folding simulations. [My Copy] J Mol Biol, Vol. 363, No. 4. (3 November 2006), pp. 835-857. by A. Colubri, A. K. Jha, M. Y. Shen, et al.A. Sali, R. S. Berry, T. R. Sosnick, K. F. Freed posted to folding protein by j3xucite on 2007-09-13 22:30:42 as along with 2 people mkotlyar mijam
	Assembly of protein tertiary structures from fragments with similar local sequences using simulated annealing and bayesian scoring functions [My Copy] Journal of Molecular Biology, Vol. 268, No. 1. (25 April 1997), pp. 209-225. by K. Simons posted to folding protein by j3xucite on 2007-09-13 22:10:26 as along with 11 people and 2 groups paddydu Diego_Prada reyez guxiyou ana jwm vavi wouterboomsma hmk mijam joule structural_bioinformatics Bioinformatics
	Building native protein conformation from highly approximate backbone torsion angles. [My Copy] Proc Natl Acad Sci U S A, Vol. 102, No. 45. (8 November 2005), pp. 16227-16232. by H. Gong, P. J. Fleming, G. D. Rose posted to folding protein by j3xucite on 2007-08-15 03:45:46 as along with 2 people Diego_Prada allmensch
	Protein folding and the organization of the protein topology universe [My Copy] Trends in Biochemical Sciences, Vol. 30, No. 1. (January 2005), pp. 13-19. by Kresten Lindorff-Larsen, Peter Rogen, Emanuele Paci, Michele Vendruscolo, Christopher M. Dobson posted to folding protein by j3xucite on 2007-05-23 17:07:13 as
	Minimalist Representations and the Importance of Nearest Neighbor Effects in Protein Folding Simulations [My Copy] Journal of Molecular Biology, Vol. 363, No. 4. (3 November 2006), pp. 835-857. by Andres Colubri, Abhishek K. Jha, Min-Yi Shen, et al.Andrej Sali, Stephen R. Berry, Tobin R. Sosnick, Karl F. Freed posted to folding protein by j3xucite on 2007-05-23 17:03:17 as
	Rapid protein fold determination using unassigned NMR data. [My Copy] Proc Natl Acad Sci U S A, Vol. 100, No. 26. (23 December 2003), pp. 15404-15409. by J. Meiler, D. Baker posted to data folding nmr unassigned by j3xucite on 2006-03-04 21:45:21 as along with 2 people babakap apaydin
	Global folds of proteins with low densities of NOEs using residual dipolar couplings: application to the 370-residue maltodextrin-binding protein. [My Copy] J Mol Biol, Vol. 300, No. 1. (30 June 2000), pp. 197-212. by G. A. Mueller, W. Y. Choy, D. Yang, J. D. Forman-Kay, R. A. Venters, L. E. Kay posted to folding noe protein rdc by j3xucite on 2006-03-04 21:18:51 as along with 1 person kumar_physics
	Use of residual dipolar couplings as restraints in ab initio protein structure prediction. [My Copy] Biopolymers, Vol. 70, No. 4. (December 2003), pp. 548-562. by T. Haliloglu, A. Kolinski, J. Skolnick posted to ab folding initio rdc by j3xucite on 2006-03-04 21:17:05 as along with 1 person apaydin
	Automated protein fold determination using a minimal NMR constraint strategy. [My Copy] Protein Sci, Vol. 12, No. 6. (June 2003), pp. 1232-1246. by D. Zheng, Y. J. Huang, H. N. Moseley, et al.R. Xiao, J. Aramini, G. V. Swapna, G. T. Montelione posted to constraint folding nmr by j3xucite on 2006-03-04 21:14:02 as

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bibtex-import	190
protein	83
structure	41
prediction	19
folding	18
threading	17
interaction	14
function	13
rdc	13
nmr	12
energy	10
alignment	8
assignment	7
analysis	5
biological	5
motif	5
network	5
biology	4
determination	4
gene	4
assessment	3
crf	3
database	3
fold	3
hmm	3
loop	3
modeling	3
noe	3
sampling	3
search	3
site	3
systems	3
backbone	2
chain	2
classification	2
constrained	2
delaunay	2
expression	2
graph	2
homology	2
linear	2
matching	2
modelqualityassessment	2
multiple	2
packing	2
programming	2
quality	2
qualityassessment	2
recognition	2
resonance	2
sequence	2
side	2
side-chain	2
ab	1
alternativealignment	1
angle	1
assignments	1
atom	1
automated	1
bipartite	1
blosum	1
casp8	1
chemical	1
cis-proline	1
cmu	1
cog	1
conformation	1
conformational	1
constraint	1
contactmapprediction	1
cs	1
data	1
de	1
design	1
dipocoup	1
distance	1
docking	1
dssp	1
dynamics	1
em	1
entropyfolding	1
estimation	1
fb	1
gpu	1
histogram	1
homolog	1
hydrogen	1
initio	1
iterativealignment	1
itneraction	1
jigsaw	1
learning	1
local	1
machine	1
membrane	1
model	1
modelqualityassess	1
modelselection	1
molecular	1
noesy	1
novo	1
ontology	1
orthologous	1
parameter	1
pathway	1
peak	1
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profile	1
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ptas	1
ranking	1
recogntion	1
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reduce	1
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rna	1
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sequential	1
shift	1
similarity	1
simultaneous	1
spectral	1
structurealignment	1
system	1
training	1
transmembrane	1
tree-decomposition	1
unassigned	1
using	1
voronoi	1
wang	1

j3xucite's folding [18 articles] Export

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