jackjackjjj's watchlist [at least 200 articles] Export

Recent papers matching jackjackjjj's watchlist criteria

	Genome-wide autozygosity mapping in human populations. [My Copy] Genetic epidemiology, Vol. 33, No. 2. (February 2009), pp. 172-180. by Shuang Wang, Chad Haynes, Francis Barany, Jurg Ott posted to snp roh population human homozygosity genome-wide autozigosity by ealloza on 2009-11-12 18:34:23 as along with 2 people psique daforerog
	Long contiguous stretches of homozygosity in the human genome. [My Copy] Human mutation, Vol. 27, No. 11. (November 2006), pp. 1115-1121. by Ling-Hui H. Li, Sheng-Feng F. Ho, Chien-Hsiun H. Chen, et al.Chun-Yu Y. Wei, Wan-Ching C. Wong, Li-Ying Y. Li, Shuen-Iu I. Hung, Wen-Hung H. Chung, Wen-Han H. Pan, Ming-Ta T. Lee, Fuu-Jen J. Tsai, Ching-Fen F. Chang, Jer-Yuarn Y. Wu, Yuan-Tsong T. Chen posted to snp loh human homozygosity by ealloza on 2009-11-12 18:31:30 as along with 2 people daforerog psique
	Extended tracts of homozygosity in outbred human populations. [My Copy] Human molecular genetics, Vol. 15, No. 5. (1 March 2006), pp. 789-795. by Jane Gibson, Newton E. Morton, Andrew Collins posted to snp roh population loh homozygosity hapmap by ealloza on 2009-11-12 18:27:19 as along with 3 people daforerog psique ashandanj
	A meta-analysis of human embryonic stem cells transcriptome integrated into a web-based expression atlas. [My Copy] Stem cells (Dayton, Ohio), Vol. 25, No. 4. (April 2007), pp. 961-973. by Said Assou, Tanguy Le Carrour, Sylvie Tondeur, et al.Susanne Ström, Audrey Gabelle, Sophie Marty, Laure Nadal, Véronique Pantesco, Thierry Réme, Jean-Philippe P. Hugnot, Stéphan Gasca, Outi Hovatta, Samir Hamamah, Bernard Klein, John De Vos posted to webserver stem_cell microarray meta_analysis human expression embryonic by ealloza on 2009-11-12 18:23:44 as
	microRNAs at the synapse [My Copy] Nature Reviews Neuroscience, Vol. advance online publication (04 November 2009) by Gerhard Schratt posted to review nervous_system microrna by ealloza on 2009-11-11 11:24:25 as
	Transcription factories: gene expression in unions? [My Copy] Nature Reviews Genetics, Vol. 10, No. 7. (01 July 2009), pp. 457-466. by Heidi Sutherland, Wendy A. Bickmore posted to transcription_factories review expression by ealloza on 2009-11-09 16:05:51 as along with 2 people megraw mingzhi
	MicroRNA targeting specificity in mammals: determinants beyond seed pairing. [My Copy] Molecular cell, Vol. 27, No. 1. (6 July 2007), pp. 91-105. by Andrew Grimson, Kyle Kai-How K. Farh, Wendy K. Johnston, Philip Garrett-Engele, Lee P. Lim, David P. Bartel posted to target specificity seed microrna mammals by ealloza on 2009-10-26 12:42:40 as along with 11 people and 2 groups hcoller fishtank provero giovenko jfr andersbj zwang bootsy heliopais fpattyn maralena cube_and_beyond microRNA
	Application of massively parallel sequencing to microRNA profiling and discovery in human embryonic stem cells. [My Copy] Genome research, Vol. 18, No. 4. (19 April 2008), pp. 610-621. by Ryan D. Morin, Michael D. O'Connor, Malachi Griffith, et al.Florian Kuchenbauer, Allen Delaney, Anna-Liisa L. Prabhu, Yongjun Zhao, Helen McDonald, Thomas Zeng, Martin Hirst, Connie J. Eaves, Marco A. Marra posted to stem_cell ngs microrna isomir human by ealloza on 2009-10-26 12:37:10 as along with 10 people and 2 groups giovenko fishtank inesdesantiago GustavoLacerda heliopais stajich maralena jfr caseybrown gdb microRNA Mycology
	The gputools package enables GPU computing in R. [My Copy] Bioinformatics (Oxford, England) (22 October 2009), btp608. by Joshua Buckner, Justin Wilson, Mark Seligman, Brian Athey, Stanley Watson, Fan Meng posted to gpu by shigepong on 2009-10-25 12:10:14 as along with 5 people operon hughitt1 BlackPhoenix neils druvus
	Reporting bias when using real data sets to analyze classification performance. [My Copy] Bioinformatics (Oxford, England) (21 October 2009) by Mohammadmahdi R. Yousefi, Jianping Hua, Chao Sima, Edward R. Dougherty posted to bias by shigepong on 2009-10-24 14:31:50 as
	Accurate confidence aware clustering of array CGH tumor profiles. [My Copy] Bioinformatics (Oxford, England) (21 October 2009), btp603. by Bart P. van Houte, Jaap Heringa posted to cgh by shigepong on 2009-10-24 14:30:29 as along with 1 person frohike
	MicroRNAs: tools for cancer diagnostics [My Copy] Gut, Vol. 58, No. 11. (1 November 2009), pp. 1546-1554. by T. Paranjape, F. J. Slack, J. B. Weidhaas posted to review microrna diagnostic cancer by ealloza on 2009-10-19 10:51:08 as
	miRExpress: Analyzing high-throughput sequencing data for profiling microRNA expression [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (12 October 2009), 328. by Wei C. Wang, Feng M. Lin, Wen C. Chang, Kuan Y. Lin, Hsien Da Huang, Na S. Lin posted to profiling ngs microrna expression by ealloza on 2009-10-13 16:37:33 as along with 5 people and 1 group mmartin GeeSharpMinor natstreet heliopais druvus microRNA
	'Omics Data Sharing [My Copy] Science, Vol. 326, No. 5950. (9 October 2009), pp. 234-236. by Dawn Field, Susanna-Assunta Sansone, Amanda Collis, et al.Tim Booth, Peter Dukes, Susan K. Gregurick, Karen Kennedy, Patrik Kolar, Eugene Kolker, Mary Maxon, Sian Millard, Alexis-Michel Mugabushaka, Nicola Perrin, Jacques E. Remacle, Karin Remington, Philippe Rocca-Serra, Chris F. Taylor, Mark Thorley, Bela Tiwari, John Wilbanks posted to no-tag by shigepong on 2009-10-12 11:48:04 as along with 10 people and 3 groups jmuhlich perkeo druvus dullhunk ppgardne reyez daforerog allysonlister applebyb jago Journal picks Integrative Expertise for Global Health Convention on Knowledge Commons
	Recurrent copy number alterations in BRCA1-mutated ovarian tumors alter biological pathways. [My Copy] Human mutation (2 October 2009) by Karin Leunen, Olivier Gevaert, Anneleen Daemen, et al.Vanessa Vanspauwen, Geneviève Michils, Bart De Moor, Philippe Moerman, Ignace Vergote, Eric Legius posted to recurrent method hmm example cnv acgh by rdiaz on 2009-10-09 10:06:13 as along with 1 person frohike
	Conserved Expression Patterns Predict microRNA Targets [My Copy] PLoS Comput Biol, Vol. 5, No. 9. (25 September 2009), e1000513. by William Ritchie, Megha Rajasekhar, Stephane Flamant, John E. J. Rasko posted to targets prediction pattern mrna microrna expression by ealloza on 2009-10-01 18:52:58 as along with 11 people and 1 group jperkins heliopais gdb samgj toni_marco neils ptrobajo al2na TRHvidsten djkt cisevol microRNA
	DIANA-mirPath: Integrating human and mouse microRNAs in pathways. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 15. (1 August 2009), pp. 1991-1993. by G. L. Papadopoulos, P. Alexiou, M. Maragkakis, M. Reczko, A. G. Hatzigeorgiou posted to tool pathway mouse microrna kegg integration human by ealloza on 2009-10-01 18:47:20 as along with 7 people and 2 groups megraw Stew dswan daforerog tmmurali guhjy pengchy Bioinformatics - CRUK Bioinformatics
	Metastamir: The Field of Metastasis-Regulatory microRNA Is Spreading. [My Copy] Cancer research (22 September 2009) by Douglas R. Hurst, Mick D. Edmonds, Danny R. Welch posted to regulation microrna metastasis human cancer by ealloza on 2009-10-01 18:41:38 as along with 3 people guhjy valeriehilgers giovenko
	Detection of recurrent copy number alterations in the genome: taking among-subject heterogeneity seriously [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (23 September 2009), 308. by Oscar Rueda, Ramon D. Uriarte posted to recurrent common cnv cgh acgh by rdiaz on 2009-10-01 11:10:47 as along with 1 person frohike
	Genomic profiling distinguishes familial multiple and sporadic multiple meningiomas [My Copy] BMC Medical Genomics, Vol. 2, No. 1. (2009), 42. by Yiping Shen, Fabio Nunes, Anat S. Rachamimov, et al.Marianne James, Gayatry Mohapatra, Scott Plotkin, Rebecca Betensky, David Engler, Jennifer Roy, Vijaya Ramesh, James Gusella posted to regions instability common cnv classification chromosomal cgh acgh by rdiaz on 2009-10-01 09:26:22 as
	TransmiR: a transcription factor-microRNA regulation database. [My Copy] Nucleic acids research (28 September 2009), gkp803. by Juan Wang, Ming Lu, Chengxiang Qiu, Qinghua Cui posted to transcription_factor tool regulatory_relationships regulation microrna database by ealloza on 2009-09-30 18:41:32 as along with 6 people and 2 groups frohike daforerog epinatel heliopais samgj tonamswish cube_and_beyond microRNA
	A Latent Class Model with Hidden Markov Dependence for Array CGH Data. [My Copy] Biometrics, Vol. 9999, No. 9999. (7 April 2009) by Stacia M. Desantis, E. Andrés Houseman, Brent A. Coull, David N. Louis, Gayatry Mohapatra, Rebecca A. Betensky posted to hmm cnv classification cgh acgh by rdiaz on 2009-09-28 17:26:48 as along with 1 person kdpreter
	Oligonucleotide Array-CGH Identifies Genomic Subgroups and Prognostic Markers for Tumor Stage Mycosis Fungoides [My Copy] J Invest Dermatol (17 September 2009) by Rocio Salgado, Octavio Servitje, Fernando Gallardo, et al.Maarten H. Vermeer, Pablo L. Ortiz-Romero, Maria B. Karpova, Marie C. Zipser, Cristina Muniesa, Maria P. Garcia-Muret, Teresa Estrach, Marta Salido, Julia Sanchez-Schmidt, Marta Herrera, Vicenc Romagosa, Javier Suela, Bibiana I. Ferreira, Juan C. Cigudosa, Carlos Barranco, Sergio Serrano, Reinhard Dummer, Cornelis P. Tensen, Francesc Sole, Ramon M. Pujol, Blanca Espinet posted to survival stability region instability genomic example common cgh acgh by rdiaz on 2009-09-28 15:19:34 as
	Causes and consequences of microRNA dysregulation in cancer [My Copy] Nature Reviews Genetics, Vol. 10, No. 10. (01 October 2009), pp. 704-714. by Carlo M. Croce posted to review microrna dysregulation cancer by ealloza on 2009-09-21 10:56:20 as along with 9 people and 1 group heliopais pattersonee frohike tonamswish valeriehilgers chrisamiller giovenko megraw misonneh microRNA
	An Evolutionary Perspective of Animal MicroRNAs and Their Targets. [My Copy] Journal of biomedicine & biotechnology, Vol. 2009 (2009) by Noam Shomron, David Golan, Eran Hornstein posted to targets review microrna intragenic evolution animal by ealloza on 2009-09-18 15:34:28 as along with 1 person and 1 group PabloMarin Journal picks
	The relationship between the evolution of microRNA targets and the length of their UTRs [My Copy] BMC Genomics, Vol. 10, No. 1. (14 September 2009), 431. by Chao Cheng, Nitin Bhardwaj, Mark Gerstein posted to utrs targets microrna housekeeping_genes evolutionary_rates by ealloza on 2009-09-15 16:56:43 as along with 6 people and 2 groups stajich heliopais valeriehilgers hrogers kshameer neils Mycology microRNA
	Quantitative miRNA expression analysis: Comparing microarrays with next-generation sequencing [My Copy] RNA, Vol. 15, No. 11. (10 November 2009), pp. 2028-2034. by Hanni Willenbrock, Jesper Salomon, Rolf SÃ¸kilde, et al.Kim B. Barken, Thomas N. Hansen, Finn C. Nielsen, SÃ¸ren MÃ¸ller, Thomas Litman posted to ngs microrna microarrays expression by ealloza on 2009-09-14 10:12:45 as along with 7 people and 1 group giovenko toni_marco heliopais fishtank debasis daforerog pengchy microRNA
	Sequence features associated with microRNA strand selection in humans and flies. [My Copy] BMC genomics, Vol. 10, No. 1. (4 September 2009), 413. by Hai Yang Y. Hu, Zheng Yan, Ying Xu, et al.Hao Hu, Corinna Menzel, Yan Hong H. Zhou, Wei Chen, Philipp Khaitovich posted to strands sequence selection microrna human fly by ealloza on 2009-09-07 11:14:11 as along with 4 people and 1 group heliopais cisevol samgj danmaclean microRNA
	Personalized copy number and segmental duplication maps using next-generation sequencing [My Copy] Nat Genet, Vol. 41, No. 10. (30 August 2009), pp. 1061-1067. by Can Alkan, Jeffrey M. Kidd, Tomas Marques-Bonet, et al.Gozde Aksay, Francesca Antonacci, Fereydoun Hormozdiari, Jacob O. Kitzman, Carl Baker, Maika Malig, Onur Mutlu, S. Cenk Sahinalp, Richard A. Gibbs, Evan E. Eichler posted to sequencing cnv cgh acgh by rdiaz on 2009-09-03 14:01:24 as along with 29 people and 1 group chvlyl leemachado daed gbenson n00c bozdagd dakelley sbmontgomery eshirdel merpublic shyamsg scmelton qayub natstreet fenghezi Annab djkt nuin xingxu jamesmorris brant torfinnnome jandot pkonings danmaclean daforerog frohike rschulz gangcai Journal picks
	CGHnormaliter: an iterative strategy to enhance normalization of array CGH data with imbalanced aberrations [My Copy] BMC Genomics, Vol. 10, No. 1. (26 August 2009), 401. by Bart van Houte, Thomas Binsl, Hannes Hettling, Walter Pirovano, Jaap Heringa posted to normalization cgh acgh by rdiaz on 2009-09-03 14:00:27 as
	MicroRNA Gene Networks in Oncogenesis. [My Copy] Current genomics, Vol. 10, No. 1. (March 2009), pp. 35-41. by Alexandra Drakaki, Dimitrios Iliopoulos posted to transcription_factor review microrna cancer by ealloza on 2009-09-02 14:39:11 as along with 1 person valeriehilgers
	Importing ArrayExpress datasets into R/Bioconductor. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 16. (15 August 2009), pp. 2092-2094. by Audrey Kauffmann, Tim F. Rayner, Helen Parkinson, et al.Misha Kapushesky, Margus Lukk, Alvis Brazma, Wolfgang Huber posted to package microarray database bioconductor arrayexpress by ealloza on 2009-08-26 12:31:31 as along with 11 people and 2 groups daforerog jperkins shikin pkonings lwaldron dswan guhjy chrisamiller nuin neils phoenixzxl Orengo Group Journal Picks Bioinformatics
	Sensitive and accurate detection of copy number variants using read depth of coverage [My Copy] Genome Research, Vol. 19, No. 9. (5 September 2009), pp. 1586-1592. by Seungtai Yoon, Zhenyu Xuan, Vladimir Makarov, Kenny Ye, Jonathan Sebat posted to software sequencing sequence method cnv acgh by rdiaz on 2009-08-18 14:42:04 as along with 7 people woodson8 scmelton torfinnnome dakelley n00c jbhiatt pkonings
	Regulation of MicroRNA Biogenesis: A miRiad of mechanisms. [My Copy] Cell communication and signaling : CCS, Vol. 7, No. 1. (10 August 2009), 18. by Brandi N. Davis, Akiko Hata posted to review regulation microrna biogenesis by ealloza on 2009-08-14 12:55:15 as along with 2 people PabloMarin guhjy
	MicroRNAs in Cancer [My Copy] Annual Review of Medicine, Vol. 60, No. 1. (2009), pp. 167-179. by Ramiro Garzon, George A. Calin, Carlo M. Croce posted to aberration cancer human microrna review by ealloza on 2009-07-29 10:52:08 as along with 5 people and 1 group valeriehilgers PEcomStock xingxu tonamswish guhjy microRNA
	A modified LOESS normalization applied to microRNA arrays: a comparative evaluation [My Copy] Bioinformatics, Vol. 25, No. 20. (15 October 2009), pp. 2685-2691. by Davide Risso, Maria S. Massa, Monica Chiogna, Chiara Romualdi posted to comparison expression microarray microrna normalization by ealloza on 2009-07-28 12:10:09 as along with 9 people and 1 group VR lwaldron heliopais dswan renatomilani rdiaz nuin guhjy myzhang microRNA
	Computational modeling of post-transcriptional gene regulation by microRNAs. [My Copy] Journal of computational biology : a journal of computational molecular cell biology, Vol. 15, No. 3. (11 April 2008), pp. 305-316. by R. Khanin, V. Vinciotti posted to computational microrna modeling post-transcriptional regulation by ealloza on 2009-07-22 10:01:47 as along with 7 people and 1 group eckart_bindewald maralena guhjy jfr bootsy heliopais pengchy microRNA
	PennCNV: An integrated hidden Markov model designed for high-resolution copy number variation detection in whole-genome SNP genotyping data [My Copy] Genome Research, Vol. 17, No. 11. (5 November 2007), pp. 1665-1674. by Kai Wang, Mingyao Li, Dexter Hadley, et al.Rui Liu, Joseph Glessner, Struan F. A. Grant, Hakon Hakonarson, Maja Bucan posted to acgh cgh penncnv snp by rdiaz on 2009-07-20 18:01:49 as along with 2 people vplagnol jfr
	Resources for small regulatory RNAs. [My Copy] Current protocols in molecular biology / edited by Frederick M. Ausubel ... [et al.], Vol. Chapter 19 (July 2009) by George W. Bell, Fran Lewitter posted to database microrna rna by ealloza on 2009-07-06 12:36:57 as along with 3 people and 2 groups sebastien_vigneau ppgardne erel10 Small RNAs Journal picks
	Emerging roles of microRNAs as molecular switches in the integrated circuit of the cancer cell [My Copy] RNA, Vol. 15, No. 8. (26 August 2009), pp. 1443-1461. by Georgia Sotiropoulou, Georgios Pampalakis, Evi Lianidou, Zissimos Mourelatos posted to cancer microrna review by ealloza on 2009-07-03 11:27:51 as along with 4 people pattersonee guhjy harel_shein valeriehilgers
	The role of RNAi and microRNAs in animal virus replication and antiviral immunity [My Copy] Genes & Development, Vol. 23, No. 10. (15 May 2009), pp. 1151-1164. by Jennifer L. Umbach, Bryan R. Cullen posted to immunology microrna replication review rnai virus by ealloza on 2009-07-03 11:04:59 as along with 2 people tomhebbron valeriehilgers
	A computational procedure to identify significant overlap of differentially expressed and genomic imbalanced regions in cancer datasets. [My Copy] Nucleic acids research, Vol. 37, No. 15. (1 August 2009), pp. 5057-5070. by Silvio Bicciato, Roberta Spinelli, Mattia Zampieri, et al.Eleonora Mangano, Francesco Ferrari, Luca Beltrame, Ingrid Cifola, Clelia Peano, Aldo Solari, Cristina Battaglia posted to acgh cnv expression integration by rdiaz on 2009-06-29 15:17:30 as along with 1 person frohike
	Clustered microRNAs' coordination in regulating protein-protein interaction network [My Copy] BMC Systems Biology, Vol. 3, No. 1. (26 June 2009), 65. by Xiongying Yuan, Changning Liu, Pengcheng Yang, et al.Shunmin He, Qi Liao, Shuli Kang, Yi Zhao posted to cluster interaction microrna network protein regulation by ealloza on 2009-06-29 12:44:13 as along with 3 people and 1 group dswan daforerog cisevol Bioinformatics
	Increased MicroRNA Activity in Human Cancers [My Copy] PLoS ONE, Vol. 4, No. 6. (25 June 2009), e6045. by Ariel Israel, Roded Sharan, Eytan Ruppin, Eithan Galun posted to cancer human microarray microrna by ealloza on 2009-06-25 10:28:04 as along with 3 people and 1 group tonamswish guhjy frohike microRNA
	Imaging individual microRNAs in single mammalian cells in situ. [My Copy] Nucleic acids research, Vol. 37, No. 14. (1 August 2009), e100. by Jing Lu, Andrew Tsourkas posted to imaging mammalian microrna quantification by ealloza on 2009-06-15 11:45:04 as along with 2 people guhjy reyez
	MirZ: an integrated microRNA expression atlas and target prediction resource. [My Copy] Nucleic acids research, Vol. 37, No. Web Server issue. (1 July 2009), pp. W266-272. by Jean Hausser, Philipp Berninger, Christoph Rodak, Yvonne Jantscher, Stefan Wirth, Mihaela Zavolan posted to database microrna prediction target webserver by ealloza on 2009-06-12 15:27:55 as along with 5 people and 1 group frohike dswan guhjy samgj daforerog Bioinformatics
	FANTOM4 EdgeExpressDB: an integrated database of promoters, genes, microRNAs, expression dynamics and regulatory interactions [My Copy] Genome Biology, Vol. 10, No. 4. (2009), R39. by Jessica Severin, Andrew Waterhouse, Hideya Kawaji, et al.Timo Lassmann, Erik van Nimwegen, Piotr Balwierz, Michiel de Hoon, David Hume, Piero Carninci, Yoshihide Hayashizaki, Harukazu Suzuki, Carsten Daub, Alistair Forrest posted to database expression microrna pattern promoter transcription_factor by ealloza on 2009-06-12 14:11:01 as along with 9 people Garamonfok rdiaz bertelsen YukaH guhjy pengchy natstreet druvus dolchan
	Evolution of MicroRNAs. [My Copy] Methods Mol Biol, Vol. 342 (2006), pp. 334-350. by A. Tranzer, P. F. Stadler posted to duplication evolution family microrna by ealloza on 2009-06-12 14:00:54 as along with 2 people tardigrade plofje
	Evolution of microRNAs located within Hox gene clusters. [My Copy] Journal of experimental zoology. Part B. Molecular and developmental evolution, Vol. 304, No. 1. (15 January 2005), pp. 75-85. by A. Tanzer, C. T. Amemiya, C. B. Kim, P. F. Stadler posted to cluster duplication evolution microrna transcription_factor by ealloza on 2009-06-12 13:59:18 as
	Molecular evolution of a microRNA cluster. [My Copy] J Mol Biol, Vol. 339, No. 2. (28 May 2004), pp. 327-335. by A. Tanzer, P. F. Stadler posted to cluster evolution microrna by ealloza on 2009-06-12 13:57:01 as along with 5 people and 2 groups marcius tardigrade mtagaya mtw maralena BioinfoCIPF SGU-CIPF

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jackjackjjj's watchlist [at least 200 articles] Export

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