jbhiatt's computational [20 articles] Export

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	Phymm and PhymmBL: metagenomic phylogenetic classification with interpolated Markov models [My Copy] Nature Methods, Vol. 6, No. 9. (02 August 2009), pp. 673-676. by Arthur Brady, Steven L. Salzberg posted to subassemblypaper method metagenomics math computational by jbhiatt on 2009-08-18 22:31:22 as along with 7 people and 4 groups azazello robertrentzsch dakelley skembel Thaverkamp sharpton stajich Orengo Group Journal Picks iSEEM Journal picks Mycology
	Sensitive and accurate detection of copy number variants using read depth of coverage [My Copy] Genome Research, Vol. 19, No. 9. (5 September 2009), pp. 1586-1592. by Seungtai Yoon, Zhenyu Xuan, Vladimir Makarov, Kenny Ye, Jonathan Sebat posted to threestar sequencing method computational by jbhiatt on 2009-08-12 22:19:12 as along with 7 people woodson8 scmelton torfinnnome dakelley n00c rdiaz pkonings
	BayesCall: A model-based base-calling algorithm for high-throughput short-read sequencing [My Copy] Genome Research, Vol. 19, No. 10. (6 October 2009), pp. 1884-1895. by Wei-Chun Kao, Kristian Stevens, Yun S. Song posted to threestar sequencing math computational by jbhiatt on 2009-08-12 22:17:32 as along with 13 people and 2 groups heliopais dakelley lp2 megraw rdiaz torfinnnome djkt n00c farhat druvus polivares stajich fpattyn BergmanLab Mycology
	Distinguishing direct versus indirect transcription factorâDNA interactions [My Copy] Genome Research, Vol. 19, No. 11. (3 November 2009), pp. 2090-2100. by Raluca GordÃ¢n, Alexander J. Hartemink, Martha L. Bulyk posted to computational method multiplexing proteomics threestar transcriptomics by jbhiatt on 2009-08-04 22:46:08 as along with 11 people oannes nklee djkt vingron venancio owhitney tmmurali emptyhb idonaldson maximilianh frohike
	Mapping short DNA sequencing reads and calling variants using mapping quality scores. [My Copy] Genome research, Vol. 18, No. 11. (19 November 2008), pp. 1851-1858. by Heng Li, Jue Ruan, Richard Durbin posted to computational sequencing subassemblypaper by jbhiatt on 2009-07-31 00:49:27 as along with 39 people and 2 groups Julien_Fayolle seninp heliopais hzoltan cthachuk darshan adijr darian bozdagd jmanning2k stubrown APRegier ghattem mmartin michaelbarton polivares jonilaserson humburg n00c jessopher maren GeeSharpMinor vmsr vplagnol natstreet poschm jfr druvus dandaman xingxu rschulz jmcq inesdesantiago Neeperando nmohelli matthewsuderman bpb gdb farhat SIMR bioinformatics BergmanLab
	Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. [My Copy] Nucleic acids research, Vol. 25, No. 17. (1 September 1997), pp. 3389-3402. by S. F. Altschul, T. L. Madden, A. A. Schäffer, et al.J. Zhang, Z. Zhang, W. Miller, D. J. Lipman posted to computational subassemblypaper by jbhiatt on 2009-07-31 00:25:30 as along with 68 people and 5 groups rshe niallhaslam ucbcjbm timhubbard parnell tfuji maria_hauser yylin mgomes BioNica idoerg pjcite swp09 kgutwin mcbla cpwardell johanviklund daforerog nlapalu sebk tjimenez shung pwais dakelley knaseanka setar iakes miguel kaarsinogen bjorns bicko jmeppley chad_davis balajis nuke2005 eweaver david_parsons indigoviolet dullhunk robert dgront happy_manatee caporaso treangen kengg manzanita CitoJam jdelcampo aengisch rabio massivemayhem mirzazadeh azazello sujaikumar beatrizfernandez GustavoLacerda siebertm adijr viktor21614 mijam grottenolm bandrewfox edvin newton1234 mariakmejia granujilla marti CharlesM References for 3DSim paper EisenLab biomedical-nlp Microbial-Ecology Plantandetc
	Base-Calling of Automated Sequencer Traces UsingPhred. II. Error Probabilities [My Copy] Genome Research, Vol. 8, No. 3. (1 March 1998), pp. 186-194. by Brent Ewing, Phil Green posted to assembly computational subassemblypaper by jbhiatt on 2009-07-30 22:15:06 as along with 5 people and 2 groups tfuji balajis indigoviolet giovanni bozdagd Bioinformatics EisenLab
	Metabolic network analysis integrated with transcript verification for sequenced genomes [My Copy] Nat Meth, Vol. 6, No. 8. (August 2009), pp. 589-592. by Ani Manichaikul, Lila Ghamsari, Erik F. Y. Hom, et al.Chenwei Lin, Ryan R. Murray, Roger L. Chang, S. Balaji, Tong Hao, Yun Shen, Arvind K. Chavali, Ines Thiele, Xinping Yang, Changyu Fan, Elizabeth Mello, David E. Hill, Marc Vidal, Kourosh Salehi-Ashtiani, Jason A. Papin posted to computational systems twostar by jbhiatt on 2009-07-30 19:25:59 as
	Partial penetrance facilitates developmental evolution in bacteria [My Copy] Nature, Vol. 460, No. 7254. (05 July 2009), pp. 510-514. by Avigdor Eldar, Vasant K. Chary, Panagiotis Xenopoulos, et al.Michelle E. Fontes, Oliver C. Loson, Jonathan Dworkin, Patrick J. Piggot, Michael B. Elowitz posted to computational fourstar stochasticity systems by jbhiatt on 2009-07-22 19:50:05 as along with 8 people and 1 group ellarond bpcusack psique absterga biomcgary maren phoenixzxl jjray Journal picks
	Argonaute HITS-CLIP decodes microRNA\|[ndash]\|mRNA interaction maps [My Copy] Nature, Vol. 460, No. 7254. (17 June 2009), pp. 479-486. by Sung W. Chi, Julie B. Zang, Aldo Mele, Robert B. Darnell posted to computational method multiplexing rnai sequencing threestar by jbhiatt on 2009-07-22 19:49:03 as along with 17 people and 3 groups hzoltan pattersonee heliopais guhjy hcoller stajich rschulz natstreet kongl gbloeb fenghezi diaz0058 gdb megraw tonamswish giovenko valeriehilgers Mycology Journal picks microRNA
	Identification of deleterious mutations within three human genomes [My Copy] Genome Research, Vol. 19, No. 9. (3 September 2009), pp. 1553-1561. by Sung Chun, Justin C. Fay posted to computational math twostar by jbhiatt on 2009-07-21 22:00:48 as along with 9 people xingxu operon bpcusack djkt aprasad gjuggler jessopher fenghezi daforerog
	Widespread Genomic Signatures of Natural Selection in Hominid Evolution [My Copy] PLoS Genet, Vol. 5, No. 5. (8 May 2009), e1000471. by Graham Mcvicker, David Gordon, Colleen Davis, Phil Green posted to computational evolution fivestar math by jbhiatt on 2009-07-10 23:26:14 as along with 8 people and 1 group bhengeveld gjuggler lp2 farhat ilyashl stajich djkt sameersoi Mycology
	Rapid and Accurate Large-Scale Coestimation of Sequence Alignments and Phylogenetic Trees [My Copy] Science, Vol. 324, No. 5934. (19 June 2009), pp. 1561-1564. by Kevin Liu, Sindhu Raghavan, Serita Nelesen, C. Randal Linder, Tandy Warnow posted to computational math twostar by jbhiatt on 2009-07-09 22:11:34 as along with 26 people and 4 groups gjuggler parnell kinestetika robertrentzsch xianjun gdb stajich operon biomcgary kieran101 zwang michaelbarton vingron tatman303 hryk lizbiogen pkonings ppgardne dokky aprasad timflutre inquil TRHvidsten djkt fenghezi phoenixzxl Orengo Group Journal Picks Mycology Journal picks iSEEM
	Diversity-based, model-guided construction of synthetic gene networks with predicted functions [My Copy] Nat Biotech, Vol. 27, No. 5. (19 May 2009), pp. 465-471. by Tom Ellis, Xiao Wang, James J. Collins posted to computational engineering systems threestar by jbhiatt on 2009-05-11 20:48:43 as along with 7 people boko4ikameto druvus dbikard jvb balabu hryk dswan
	Mechanisms that Specify Promoter Nucleosome Location and Identity [My Copy] Vol. 137, No. 3. (1 May 2009), pp. 445-458. by Paul D. Hartley, Hiten D. Madhani posted to computational epigenetics journalclub twostar by jbhiatt on 2009-04-30 21:43:36 as
	ABySS: a parallel assembler for short read sequence data. [My Copy] Genome research, Vol. 19, No. 6. (1 June 2009), pp. 1117-1123. by Jared T. Simpson, Kim Wong, Shaun D. Jackman, Jacqueline E. Schein, Steven J. Jones, Inanç Birol posted to assembly computational fivestar method sequencing subassemblypaper by jbhiatt on 2009-03-05 21:58:51 as along with 26 people and 2 groups jfr cthachuk hzoltan ramonvidal orzenil pachorip GustavoLacerda jonilaserson operon polivares reyez jasontsai n00c humburg dakelley jessopher idonaldson robsyme neils natstreet AaronDarling druvus rpatward dswan stajich erikarner BergmanLab Mycology
	A transcription factor affinity-based code for mammalian transcription initiation [My Copy] Genome Research, Vol. 19, No. 4. (13 April 2009), pp. 644-656. by Molly Megraw, Fernando Pereira, Shane T. Jensen, Uwe Ohler, Artemis G. Hatzigeorgiou posted to computational method threestar transcriptomics by jbhiatt on 2009-02-26 07:19:35 as along with 9 people and 1 group heliopais guhjy tonamswish rpatward siebert biozhang2001 absterga samgj daforerog microRNA
	Stochastic modelling for quantitative description of heterogeneous biological systems [My Copy] Nature Reviews Genetics, Vol. 10, No. 2. (01 February 2009), pp. 122-133. by Darren J. Wilkinson posted to computational review threestar by jbhiatt on 2009-02-26 07:10:00 as along with 12 people and 1 group pjmaybank pkm mhellmann vingron dah paulschlesinger guhjy tinatoni rdiaz Zephyrus xingxu misonneh Roswell Cancer Crosstalk
	Analysis of combinatorial cis-regulation in synthetic and genomic promoters [My Copy] Nature, Vol. 457, No. 7226. (23 November 2008), pp. 215-218. by Jason Gertz, Eric D. Siggia, Barak A. Cohen posted to computational engineering fivestar journalclub method systems transcriptomics by jbhiatt on 2009-02-26 06:18:34 as along with 17 people and 4 groups Vincent_Rouilly pcarbo emptyhb TRHvidsten rpatward lusk maximilianh roys dpollard druvus sebastien_vigneau pengchy sandersl djkt siebert isimpson xianjun TranscriptionalRegulationWithThermodynamicModels RockmanLab cis-regulatory-evolution microbiology_nijmegen
	High-resolution mapping of copy-number alterations with massively parallel sequencing. [My Copy] Nature methods, Vol. 6, No. 1. (30 January 2009), pp. 99-103. by Derek Y. Chiang, Gad Getz, David B. Jaffe, et al.Michael J. O'Kelly, Xiaojun Zhao, Scott L. Carter, Carsten Russ, Chad Nusbaum, Matthew Meyerson, Eric S. Lander posted to computational fourstar method sequencing by jbhiatt on 2009-02-26 06:11:08 as along with 6 people jfr Annab stubrown stsaft absterga xwbcn

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threestar	129
method	124
fourstar	101
journalclub	100
sequencing	92
medical	79
twostar	60
engineering	55
transcriptomics	48
fivestar	47
genotyping	41
random	35
geneticspaper	30
subassemblypaper	29
cancer	27
multiplexing	27
review	25
computational	20
proteomics	20
rnai	20
screening	20
systems	19
metagenomics	18
gwas	17
stemcell	17
dermpaper	15
evolution	15
landmark	12
immunology	11
math	11
metabolism	11
infectious	10
commentary	9
epigenetics	8
assembly	7
capture	7
dnacomputing	7
imaging	7
microfluidics	7
onestar	7
geneticmod	6
cleanup	5
aging	4
diagnostic	4
linkagemapping	4
stochasticity	4
454	2
amplification	2
epidemiology	2
fosmid	2
hypertension	2
policy	2
cardiovascular	1
caserecord	1
detection	1
example	1
femoroacetab	1
mutation	1
nostar	1
singlemol	1
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jbhiatt's computational [20 articles] Export

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