jdoconnell's library 131 articles Export

	Chaperone-dependent amyloid assembly protects cells from prion toxicity [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 20. (20 May 2008), pp. 7206-7211. by Peter M. Douglas, Sebastian Treusch, Hong-Yu Ren, et al.Randal Halfmann, Martin L. Duennwald, Susan Lindquist, Douglas M. Cyr posted to yeast prion aggregation by jdoconnell on 2009-11-10 18:02:07 as along with 2 people applebyb cactus
	A general topoisomerase I-dependent transcriptional repression in the stationary phase in yeast. [My Copy] Genes & Development, Vol. 5, No. 12a. (December 1991), pp. 2315-2326. by M. Choder posted to yeast quiescence expression by jdoconnell on 2009-11-05 19:45:56 as
	Widespread reorganization of metabolic enzymes into reversible assemblies upon nutrient starvation [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 25. (23 June 2009), pp. 10147-10152. by Rammohan Narayanaswamy, Matthew Levy, Mark Tsechansky, et al.Gwendolyn M. Stovall, Jeremy D. O'Connell, Jennifer Mirrielees, Andrew D. Ellington, Edward M. Marcotte posted to yeast quiescence by jdoconnell on 2009-11-05 19:32:33 as along with 3 people ericsuh cmtrent adampah
	Reversible cytoplasmic localization of the proteasome in quiescent yeast cells [My Copy] J. Cell Biol., Vol. 181, No. 5. (2 June 2008), pp. 737-745. by Damien Laporte, Benedicte Salin, Bertrand Daignan-Fornier, Isabelle Sagot posted to yeast stress_granules cell_biology by jdoconnell on 2009-11-05 18:20:08 as
	Molecular Signatures of Proliferation and Quiescence in Hematopoietic Stem Cells [My Copy] PLoS Biol, Vol. 2, No. 10. (28 September 2004), e301. by Teresa A. Venezia, Akil A. Merchant, Carlos A. Ramos, et al.Nathan L. Whitehouse, Andrew S. Young, Chad A. Shaw, Margaret A. Goodell posted to quiescence by jdoconnell on 2009-11-05 18:09:53 as along with 2 people kentsis hplatero
	Exploring the sequence space for tetracycline-dependent transcriptional activators: Novel mutations yield expanded range and sensitivity [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 97, No. 14. (5 July 2000), pp. 7963-7968. by Stefanie Urlinger, Udo Baron, Marion Thellmann, Mazahir T. Hasan, Hermann Bujard, Wolfgang Hillen posted to expression eukaryotic_cells by jdoconnell on 2009-11-04 23:19:15 as along with 1 person iskathy
	Tight control of gene expression in mammalian cells by tetracycline-responsive promoters [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 89, No. 12. (15 June 1992), pp. 5547-5551. by M. Gossen, H. Bujard posted to expression by jdoconnell on 2009-11-04 23:15:20 as along with 2 people Garth_9145 isera
	Protein Quality Control: On IPODs and Other JUNQ [My Copy] Current Biology, Vol. 18, No. 21. (11 November 2008), pp. R1019-R1021. by K. Bagola, T. Sommer posted to ubiquitin junq ipod aggregation by jdoconnell on 2009-11-02 16:03:48 as
	Construction of a CUP1 promoter-based vector to modulate gene expression in Saccharomyces cerevisiae [My Copy] Gene, Vol. 172, No. 1. (1996), pp. 169-170. by J. Mascorro-Gallardo posted to yeast plasmid by jdoconnell on 2009-10-28 18:25:49 as
	Translationally Repressed mRNA Transiently Cycles through Stress Granules during Stress [My Copy] Mol. Biol. Cell, Vol. 19, No. 10. (1 October 2008), pp. 4469-4479. by Stephanie Mollet, Nicolas Cougot, Ania Wilczynska, et al.Francois Dautry, Michel Kress, Edouard Bertrand, Dominique Weil posted to stress_granules by jdoconnell on 2009-10-27 22:16:30 as
	Stress granules [My Copy] Current Biology, Vol. 19, No. 10. (26 May 2009), pp. R397-R398. by Paul Anderson, Nancy Kedersha posted to stress_granules by jdoconnell on 2009-10-27 22:16:21 as
	Stress granules: the Tao of RNA triage [My Copy] Trends in Biochemical Sciences (04 March 2008) by P. Anderson posted to stress_granules p_bodies by jdoconnell on 2009-10-27 22:15:38 as
	Asymmetric Inheritance of Oxidatively Damaged Proteins During Cytokinesis [My Copy] Science, Vol. 299, No. 5613. (14 March 2003), pp. 1751-1753. by Hugo Aguilaniu, Lena Gustafsson, Michel Rigoulet, Thomas Nystrom posted to yeast chaperones assymetry by jdoconnell on 2009-10-26 18:56:11 as
	Characterization of Differentiated Quiescent and Nonquiescent Cells in Yeast Stationary-Phase Cultures [My Copy] Mol. Biol. Cell, Vol. 19, No. 3. (1 March 2008), pp. 1271-1280. by Anthony D. Aragon, Angelina L. Rodriguez, Osorio Meirelles, et al.Sushmita Roy, George S. Davidson, Phillip H. Tapia, Chris Allen, Ray Joe, Don Benn, Margaret Werner-Washburne posted to yeast trehalose quiescence aging by jdoconnell on 2009-10-26 18:54:19 as along with 2 people Osorio roys
	Genomic expression programs in the response of yeast cells to environmental changes. [My Copy] Molecular biology of the cell, Vol. 11, No. 12. (December 2000), pp. 4241-4257. by A. P. Gasch, P. T. Spellman, C. M. Kao, et al.O. Carmel-Harel, M. B. Eisen, G. Storz, D. Botstein, P. O. Brown posted to yeast shock osmotics_shock heat_shock expression dna_microarrays by jdoconnell on 2009-10-26 17:57:01 as along with 9 people and 2 groups lawraga kristallreiner koller jbsaltz lfriedl lesander raiyar roys tvdbulck kdl steinmetzlab
	Dynamic Proteomics: a database for dynamics and localizations of endogenous fluorescently-tagged proteins in living human cells [My Copy] Nucl. Acids Res. (9 October 2009), gkp808. by Milana Frenkel-Morgenstern, Ariel A. Cohen, Naama Geva-Zatorsky, et al.Eran Eden, Jaime Prilusky, Irina Issaeva, Alex Sigal, Cellina Cohen-Saidon, Yuvalal Liron, Lydia Cohen, Tamar Danon, Natalie Perzov, Uri Alon posted to human fluorescence cell_biology by jdoconnell on 2009-10-22 17:30:39 as
	Comprehensive Mapping of Long-Range Interactions Reveals Folding Principles of the Human Genome [My Copy] Science, Vol. 326, No. 5950. (9 October 2009), pp. 289-293. by Erez Lieberman-Aiden, Nynke L. van Berkum, Louise Williams, et al.Maxim Imakaev, Tobias Ragoczy, Agnes Telling, Ido Amit, Bryan R. Lajoie, Peter J. Sabo, Michael O. Dorschner, Richard Sandstrom, Bradley Bernstein, M. A. Bender, Mark Groudine, Andreas Gnirke, John Stamatoyannopoulos, Leonid A. Mirny, Eric S. Lander, Job Dekker posted to cell_biology by jdoconnell on 2009-10-09 20:54:47 as along with 31 people and 3 groups pmcarlton alhufton psique qayub chvlyl TorstenWaldminghaus kintoki Garamonfok inesdesantiago NickFurnham DrRichardBadge roys rdiaz daveGerrard colinveal frohike nrk891 zwang timflutre afenley kshameer polivares mgatmedsci diamantis flbarroso fenghezi daforerog bpcusack gjuggler gdb gbloeb JLab BergmanLab Journal picks
	Robust heat shock induces eIF2alpha-phosphorylation-independent assembly of stress granules containing eIF3 and 40S ribosomal subunits in budding yeast, Saccharomyces cerevisiae [My Copy] J Cell Sci, Vol. 122, No. 12. (15 June 2009), pp. 2078-2088. by Tomas Grousl, Pavel Ivanov, Ivana Frydlova, et al.Pavla Vasicova, Filip Janda, Jana Vojtova, Katerina Malinska, Ivana Malcova, Lenka Novakova, Dana Janoskova, Leos Valasek, Jiri Hasek posted to yeast stress_granules heat_shock by jdoconnell on 2009-10-08 01:29:19 as
	Unravelling the ultrastructure of stress granules and associated P-bodies in human cells. [My Copy] Journal of cell science, Vol. 122, No. Pt 20. (15 October 2009), pp. 3619-3626. by Sylvie Souquere, Stéphanie Mollet, Michel Kress, François Dautry, Gérard Pierron, Dominique Weil posted to stress_granules p_bodies p by jdoconnell on 2009-10-08 01:28:11 as
	P bodies promote stress granule assembly in Saccharomyces cerevisiae [My Copy] J. Cell Biol., Vol. 183, No. 3. (3 November 2008), pp. 441-455. by J. Ross Buchan, Denise Muhlrad, Roy Parker posted to yeast stress_granules p_bodies by jdoconnell on 2009-10-08 01:27:10 as
	Rapid Characterization of Complex Viscous Liquids at the Molecular Level [My Copy] Angewandte Chemie International Edition, Vol. 9999, No. 9999. (2009), NA. by Wai S. Law, Huanwen Chen, Jianhua Ding, et al.Shuiping Yang, Liang Zhu, Gerardo Gamez, Konstantin Chingin, Yulin Ren, Renato Zenobi posted to mass_spectrometry by jdoconnell on 2009-10-07 23:19:15 as
	Towards the molecular basis of heterosis [My Copy] Trends in Plant Science, Vol. 12, No. 9. (September 2007), pp. 427-432. by Frank Hochholdinger, Nadine Hoecker posted to heterosis by jdoconnell on 2009-10-05 18:50:04 as along with 2 people Facsiga dietersteinmetz
	In Search of the Molecular Basis of Heterosis [My Copy] Plant Cell, Vol. 15, No. 10. (1 October 2003), pp. 2236-2239. by James A. Birchler, Donald L. Auger, Nicole C. Riddle posted to heterosis by jdoconnell on 2009-10-05 18:49:34 as along with 1 person echinotrix
	Proof and evolutionary analysis of ancient genome duplication in the yeast Saccharomyces cerevisiae [My Copy] Nature, Vol. 428, No. 6983. (07 March 2004), pp. 617-624. by Manolis Kellis, Bruce W. Birren, Eric S. Lander posted to yeast cell_biology by jdoconnell on 2009-10-05 18:33:13 as along with 12 people and 2 groups GustavoLacerda gjuggler clearbluespring azazello pinney timflutre aramata evaf dchughes nirfriedman IbnBio ehud G4ID Genetics-of-Gambling
	A soma-to-germline transformation in long-lived Caenorhabditis elegans mutants [My Copy] Nature, Vol. 459, No. 7250. (07 June 2009), pp. 1079-1084. by Sean P. Curran, Xiaoyun Wu, Christian G. Riedel, Gary Ruvkun posted to aging by jdoconnell on 2009-10-02 19:16:31 as along with 2 people biomcgary reyez
	Germline P Granules Are Liquid Droplets That Localize by Controlled Dissolution/Condensation [My Copy] Science, Vol. 324, No. 5935. (26 June 2009), pp. 1729-1732. by Clifford P. Brangwynne, Christian R. Eckmann, David S. Courson, et al.Agata Rybarska, Carsten Hoege, Jobin Gharakhani, Frank Julicher, Anthony A. Hyman posted to cell_biology aggregation by jdoconnell on 2009-09-29 21:58:41 as along with 5 people chiufanlee biomcgary cjryan katiehumphry kshundyak
	Photosystem I gene cassettes are present in marine virus genomes [My Copy] Nature, Vol. 461, No. 7261. (26 August 2009), pp. 258-262. by Itai Sharon, Ariella Alperovitch, Forest Rohwer, et al.Matthew Haynes, Fabian Glaser, Nof Atamna-Ismaeel, Ron Y. Pinter, Frederic Partensky, Eugene V. Koonin, Yuri I. Wolf, Nathan Nelson, Oded Beja posted to plant_engineering cell_biology by jdoconnell on 2009-09-16 17:02:21 as along with 2 people cmzmasek neils
	The Chemical Genomic Portrait of Yeast: Uncovering a Phenotype for All Genes [My Copy] Science, Vol. 320, No. 5874. (18 April 2008), pp. 362-365. by Maureen E. Hillenmeyer, Eula Fung, Jan Wildenhain, et al.Sarah E. Pierce, Shawn Hoon, William Lee, Michael Proctor, St, Mike Tyers, Daphne Koller, Russ B. Altman, Ronald W. Davis, Corey Nislow, Guri Giaever posted to yeast cell_biology by jdoconnell on 2009-09-15 23:58:26 as along with 17 people and 1 group daveGerrard bpcusack rdowell lawraga ajbattle sschurer ocs emptyhb tmmurali nfreed bala lp2 roys stajich chasmand guhjy raiyar Mycology
	Synthetic metabolic pipelines [My Copy] Nat Biotech, Vol. 27, No. 8. (01 August 2009), pp. 728-729. by Matthew P. DeLisa, Robert J. Conrado posted to network_engineering by jdoconnell on 2009-09-08 23:21:43 as along with 3 people abhishek_tiwari pmendes dbk
	Design of tomato fruits with reduced allergenicity by dsRNAi-mediated inhibition of ns-LTP (Lyc e 3) expression [My Copy] Plant Biotechnology Journal, Vol. 4, No. 2. (March 2006), pp. 231-242. by Lien Q. Le, Yvonne Lorenz, Stephan Scheurer, et al.Kay Fötisch, Ernesto Enrique, Joan Bartra, Sophia Biemelt, Stefan Vieths, Uwe Sonnewald posted to plant_engineering by jdoconnell on 2009-09-03 18:08:12 as
	Genetic engineering for removing food allergens from plants [My Copy] Trends in Plant Science, Vol. 13, No. 6. (June 2008), pp. 257-260. by Mohan B. Singh, Prem L. Bhalla posted to plant_engineering network_engineering by jdoconnell on 2009-09-01 23:20:52 as
	Super-resolution imaging in live Caulobacter crescentus cells using photoswitchable EYFP [My Copy] Nat Meth, Vol. 5, No. 11. (November 2008), pp. 947-949. by Julie S. Biteen, Michael A. Thompson, Nicole K. Tselentis, Grant R. Bowman, Lucy Shapiro, W. E. Moerner posted to storm fluorescence by jdoconnell on 2009-08-31 21:44:25 as along with 2 people and 1 group pyjamashark samjlord moernerlab
	Individual Human Phenotypes in Metabolic Space and Time [My Copy] Journal of Proteome Research, Vol. 0, No. 0. (0000) by Patrizia Bernini, Ivano Bertini, Claudio Luchinat, et al.Stefano Nepi, Edoardo Saccenti, Hartmut Schäfer, Birk Schütz, Manfred Spraul, Leonardo Tenori posted to mass_spectrometry cell_biology by jdoconnell on 2009-08-27 19:31:49 as
	Programming cells by multiplex genome engineering and accelerated evolution [My Copy] Nature, Vol. 460, No. 7257. (26 July 2009), pp. 894-898. by Harris H. Wang, Farren J. Isaacs, Peter A. Carr, et al.Zachary Z. Sun, George Xu, Craig R. Forest, George M. Church posted to network_engineering by jdoconnell on 2009-08-27 19:30:32 as along with 13 people and 2 groups abhishek_tiwari TorstenWaldminghaus dswan Annab badi druvus dayjm pkonings zwang phoenixzxl biomcgary djkt dbikard Journal picks Synthetic Biology
	Applying mass spectrometry-based proteomics to genetics, genomics and network biology [My Copy] Nat Rev Genet, Vol. 10, No. 9. (September 2009), pp. 617-627. by Matthias Gstaiger, Ruedi Aebersold posted to mass_spectrometry by jdoconnell on 2009-08-27 18:12:40 as along with 8 people and 1 group VGreiff renatomilani theodorejmorgan neilswainston nuin brianb TRHvidsten frohike Morgan Lab-KSU
	Reducing the Dimensionality of Data with Neural Networks [My Copy] Science, Vol. 313, No. 5786. (28 July 2006), pp. 504-507. by G. E. Hinton, R. R. Salakhutdinov posted to data_analysis by jdoconnell on 2009-08-13 19:37:29 as along with 26 people and 9 groups mthomure pascanur __andy__ euclid austincarp babakap dakelley zheaton brian pdlug ana barry garyfeng mrkrause yama_tah neilh sdvillal dwf jwdietrich rgb mp4man josepe marcusfrean robincha ygarb ancechu structural_bioinformatics ReadingLab MathBio Bioinformatics Cybernetics pileWorks S-Lab Biomedical_Cybernetics AQUA-FONTIS-Study
	Blocking S-adenosylmethionine synthesis in yeast allows selenomethionine incorporation and multiwavelength anomalous dispersion phasing [My Copy] Proceedings of the National Academy of Sciences, Vol. 104, No. 16. (17 April 2007), pp. 6678-6683. by Michael G. Malkowski, Erin Quartley, Alan E. Friedman, et al.Julie Babulski, Yoshiko Kon, Jennifer Wolfley, Meriem Said, Joseph R. Luft, Eric M. Phizicky, George T. Detitta, Elizabeth J. Grayhack posted to yeast selenocysteine by jdoconnell on 2009-08-12 19:41:11 as
	Genome-wide screen of Saccharomyces cerevisiae null allele strains identifies genes involved in selenomethionine resistance [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 46. (18 November 2008), pp. 17682-17687. by Jessica Bockhorn, Bharvi Balar, Dongming He, Eden Seitomer, Paul R. Copeland, Terri G. Kinzy posted to yeast selenocysteine by jdoconnell on 2009-08-12 19:36:53 as
	Synthetic protein scaffolds provide modular control over metabolic flux [My Copy] Nature Biotechnology, Vol. 27, No. 8. (02 August 2009), pp. 753-759. by John E. Dueber, Gabriel C. Wu, G. Reza Malmirchegini, et al.Tae S. Moon, Christopher J. Petzold, Adeeti V. Ullal, Kristala L. J. Prather, Jay D. Keasling posted to network_engineering by jdoconnell on 2009-08-06 23:06:08 as along with 6 people abhishek_tiwari dbikard grahamc phoenixzxl kevinchannon biomcgary
	PAX4 enhances beta-cell differentiation of human embryonic stem cells. [My Copy] PloS one, Vol. 3, No. 3. (2008) by Chee Gee G. Liew, Nadia N. Shah, Sarah J. Briston, et al.Ruth M. Shepherd, Cheen Peen P. Khoo, Mark J. Dunne, Harry D. Moore, Karen E. Cosgrove, Peter W. Andrews posted to cell_biology diabetes by jdoconnell on 2009-08-06 22:45:08 as
	Three-dimensional analysis of protein aggregate body in Saccharomyces cerevisiae cells [My Copy] J Electron Microsc (Tokyo), Vol. 48, No. 2. (1 January 1999), pp. 173-176. by Naomi Kamasawa, Tomoko Yoshida, Mitsuyoshi Ueda, Atsuo Tanaka, Masako Osumi posted to electron_microscopy yeast by jdoconnell on 2009-08-05 17:14:00 as
	Dependence of Mouse Embryonic Stem Cells on Threonine Catabolism [My Copy] Science, Vol. 325, No. 5939. (24 July 2009), pp. 435-439. by Jian Wang, Peter Alexander, Leeju Wu, Robert Hammer, Ondine Cleaver, Steven L. Mcknight posted to cell_biology by jdoconnell on 2009-07-30 19:48:56 as along with 1 person and 2 groups wsjames Marcotte_Lab Oxford Virology
	Physical basis of colors seen in Congo red-stained amyloid in polarized light [My Copy] Lab Invest, Vol. 88, No. 3. (31 December 2007), pp. 232-242. by Alexander J. Howie, Douglas B. Brewer, Daniel Howell, Adrian P. Jones posted to amyloid fluorescence by jdoconnell on 2009-07-24 16:56:05 as
	Protein aggregation kinetics, mechanism, and curve-fitting: A review of the literature [My Copy] Biochimica et Biophysica Acta (BBA) - Proteins & Proteomics, Vol. 1794, No. 3. (March 2009), pp. 375-397. by Aimee M. Morris, Murielle A. Watzky, Richard G. Finke posted to aggregation amyloid by jdoconnell on 2009-07-22 18:26:57 as along with 3 people pjkiley chiufanlee kevinchannon
	Whole-cell 3D STORM reveals interactions between cellular structures with nanometer-scale resolution [My Copy] Nature Methods, Vol. 5, No. 12. (23 November 2008), pp. 1047-1052. by Bo Huang, Sara A. Jones, Boerries Brandenburg, Xiaowei Zhuang posted to fluorescence storm by jdoconnell on 2009-07-21 00:06:56 as along with 2 people OliverHarriman pyjamashark
	Facts and fiction of genetically engineered food [My Copy] Trends in Biotechnology, Vol. 27, No. 5. (May 2009), pp. 277-286. by Rita Batista, Maria M. Oliveira posted to network_engineering by jdoconnell on 2009-07-09 22:25:44 as
	Cy3-Cy5 Covalent Heterodimers for Single-Molecule Photoswitching [My Copy] The Journal of Physical Chemistry B, Vol. 112, No. 38. (25 September 2008), pp. 11878-11880. by Nicholas R. Conley, Julie S. Biteen, W. E. Moerner posted to fluorescence by jdoconnell on 2009-07-08 18:39:30 as along with 1 person and 1 group samjlord moernerlab
	Differential Congo Red staining: The effects of pH, non-aqueous solvents and the substrate [My Copy] The Histochemical Journal, Vol. 16, No. 2. (9 February 1984), pp. 195-210. by S. Mera, J. Davies posted to aggregation fluorescence by jdoconnell on 2009-07-07 20:27:40 as
	Dynamics and diversity in autophagy mechanisms: lessons from yeast. [My Copy] Nature reviews. Molecular cell biology, Vol. 10, No. 7. (03 July 2009), pp. 458-467. by Hitoshi Nakatogawa, Kuninori Suzuki, Yoshiaki Kamada, Yoshinori Ohsumi posted to autophagy yeast by jdoconnell on 2009-07-01 21:43:09 as along with 1 person tprpip
	Enrichment of tomato fruit with health-promoting anthocyanins by expression of select transcription factors [My Copy] Nature Biotechnology, Vol. 26, No. 11. (26 October 2008), pp. 1301-1308. by Eugenio Butelli, Lucilla Titta, Marco Giorgio, et al.Hans-Peter Mock, Andrea Matros, Silke Peterek, Elio G. W. M. Schijlen, Robert D. Hall, Arnaud G. Bovy, Jie Luo, Cathie Martin posted to network_engineering by jdoconnell on 2009-06-22 18:11:56 as along with 1 person druvus

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yeast	50
aggregation	48
cell_biology	19
fluorescence	14
network_engineering	9
quiescence	9
aging	8
prion	8
dimeric_helicases	7
electron_microscopy	7
stress_granules	7
expression	6
heat	6
amyloid	5
protein_folding	5
proteosome	5
trehalose	5
autophagy	4
chaperones	4
aggresome	3
cellular_immune_response	3
mass_spectrometry	3
p_bodies	3
plant_engineering	3
plasmid	3
ubiquitin	3
diabetes	2
heat_shock	2
heterosis	2
osmotics_shock	2
selenocysteine	2
shock	2
storm	2
systems	2
assymetry	1
crystalization	1
data_analysis	1
dna_microarrays	1
domain_swapping	1
er	1
eukaryotic_cells	1
fly	1
hsp104	1
hsp90	1
human	1
huntingtons	1
ipod	1
junq	1
macromolecular_crowding	1
medin	1
mouse	1
p	1
polarization	1
polyglutamine	1
retrovirus	1
sir2	1
transciption_regulation	1
unfloded_protein_response	1
worm	1

jdoconnell's library 131 articles Export

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