jeargle's library 27 articles Export

	Evolution of Complex Modular Biological Networks [My Copy] PLoS Comput Biol, Vol. 4, No. 2. (8 February 2008), e23. by Arend Hintze, Christoph Adami posted to network evolution artificial_chemistry by jeargle on 2009-11-16 19:13:50 as along with 8 people wangbo rouault saket grahamc laughcry rcaze alhufton phoenixzxl
	Web services at the European Bioinformatics Institute-2009 [My Copy] Nucl. Acids Res., Vol. 37, No. suppl_2. (1 July 2009), pp. W6-10. by Hamish Mcwilliam, Franck Valentin, Mickael Goujon, et al.Weizhong Li, Menaka Narayanasamy, Jenny Martin, Teresa Miyar, Rodrigo Lopez posted to web_services ebi database bioinformatics by jeargle on 2009-11-09 21:36:18 as along with 14 people and 1 group artaban421 n00c daforerog dswan guhjy cassj hryk fgibson operon fisherp druvus alaninmcr dullhunk neils Bioinformatics
	Web Services at the European Bioinformatics Institute [My Copy] Nucl. Acids Res., Vol. 35, No. Web Server issue. (18 June 2007), gkm291. by Alberto Labarga, Franck Valentin, Mikael Anderson, Rodrigo Lopez posted to web_services ebi database bioinformatics by jeargle on 2009-11-09 21:35:02 as along with 12 people tomjad druvus Cortel daforerog moborg dullhunk sujaikumar sgoetz niallhaslam sim82 alanrw tny
	A safe operating space for humanity [My Copy] Nature, Vol. 461, No. 7263. (23 September 2009), pp. 472-475. by Johan Rockstrom, Will Steffen, Kevin Noone, et al.Asa Persson, F. Stuart Chapin, Eric F. Lambin, Timothy M. Lenton, Marten Scheffer, Carl Folke, Hans J. Schellnhuber, Bjorn Nykvist, Cynthia A. de Wit, Terry Hughes, Sander van der Leeuw, Henning Rodhe, Sverker Sorlin, Peter K. Snyder, Robert Costanza, Uno Svedin, Malin Falkenmark, Louise Karlberg, Robert W. Corell, Victoria J. Fabry, James Hansen, Brian Walker, Diana Liverman, Katherine Richardson, Paul Crutzen, Jonathan A. Foley posted to environment ecology climate_change by jeargle on 2009-11-09 19:42:14 as along with 7 people and 1 group JayBird2009 nurban lilith klauso ommachi kidwellj TRHvidsten 8_01
	Full correlation analysis of conformational protein dynamics [My Copy] Proteins: Structure, Function, and Bioinformatics, Vol. 9999, No. 9999. (2007), NA. by Oliver F. Lange, Helmut Grubmüller posted to principal_component_analysis molecular_dynamics correlation_analysis allostery by jeargle on 2009-11-04 18:59:40 as along with 7 people and 1 group anuragsethi Diego_Prada softsimu barry choonpeng sobolevnrm LamBras baker-group
	Inferring consensus structure from nucleic acid sequences [My Copy] Comput. Appl. Biosci., Vol. 7, No. 3. (1 July 1991), pp. 347-352. by David K. Y. Chiu, Ted Kolodziejczak posted to trna secondary_structure rna mutual_information covariance_model by jeargle on 2009-10-06 17:51:19 as
	Identifying constraints on the higher-order structure of RNA: continued development and application of comparative sequence analysis methods [My Copy] Nucl. Acids Res., Vol. 20, No. 21. (11 November 1992), pp. 5785-5795. by R. R. Gutell, A. Power, G. Z. Hertz, E. J. Putz, G. D. Stormo posted to trna secondary_structure rna mutual_information covariance_model by jeargle on 2009-10-06 17:48:04 as
	A simple, fast, and accurate method of phylogenomic inference [My Copy] Genome Biology, Vol. 9, No. 10. (13 October 2008), R151. by Martin Wu, Jonathan Eisen posted to phylogenetic_tree bacteria amphora alignment by jeargle on 2009-09-28 17:22:43 as along with 12 people and 2 groups dakelley AaronDarling zwang cgaugain treangen Katje operon ellakat scryrps djkt aramata druvus microbiology_nijmegen iSEEM
	MUSCLE: multiple sequence alignment with high accuracy and high throughput [My Copy] Nucl. Acids Res., Vol. 32, No. 5. (19 March 2004), pp. 1792-1797. by Robert C. Edgar posted to sequence_alignment bioinformatics by jeargle on 2009-09-27 23:18:16 as along with 29 people and 2 groups mgomes tomjad foxpowa esyoun natstreet dquest BioNica gjuggler edvin yylin treangen sebk agustinarce fhsantanna nachtalp bpb chrn jwm Haggan sanchezbuelna timflutre olympos martainn newton1234 skumagai bmaust sconlan dmp kcrawlik Radiation_Damage Stressosome
	Expanding the Genetic Code of Escherichia coli [My Copy] Science, Vol. 292, No. 5516. (20 April 2001), pp. 498-500. by Lei Wang, Ansgar Brock, Brad Herberich, Peter G. Schultz posted to trna genetic_code escherichia_coli aars by jeargle on 2009-09-25 23:51:38 as along with 2 people kirasato caldavis
	Solution Conformations of Unmodified and A37N6-dimethylallyl Modified Anticodon Stem-loops of Escherichia coli tRNAPhe [My Copy] Journal of Molecular Biology, Vol. 319, No. 5. (21 June 2002), pp. 1015-1034. by Javier Cabello-Villegas, Malcolm E. Winkler, Edward P. Nikonowicz posted to trna nmr modified_nucleotides by jeargle on 2009-09-25 23:49:21 as
	RNA hydration: three nanoseconds of multiple molecular dynamics simulations of the solvated tRNAAsp anticodon hairpin [My Copy] Journal of Molecular Biology, Vol. 269, No. 3. (13 June 1997), pp. 326-341. by P. Auffinger posted to water trna molecular_dynamics by jeargle on 2009-09-25 23:47:55 as
	A Counterintuitive Mg2+-dependent and Modification-assisted Functional Folding of Mitochondrial tRNAs [My Copy] Journal of Molecular Biology, Vol. 362, No. 4. (29 September 2006), pp. 771-786. by C. Jones, A. Spencer, J. Hsu, et al.L. Spremulli, S. Martinis, M. Derider, P. Agris posted to trna mitochondria magnesium ion by jeargle on 2009-09-25 23:46:39 as
	Post-transcriptional nucleotide modification and alternative folding of RNA [My Copy] Nucl. Acids Res., Vol. 34, No. 2. (1 February 2006), pp. 721-733. by Mark Helm posted to trna rna modified_nucleotides by jeargle on 2009-09-25 23:43:37 as
	The 51â63 base pair of tRNA confers specificity for binding by EF-Tu [My Copy] RNA, Vol. 13, No. 6. (June 2007), pp. 835-840. by Lee E. Sanderson, Olke C. Uhlenbeck posted to trna ef-tu by jeargle on 2009-09-25 21:20:38 as
	The Affinity of Elongation Factor Tu for an Aminoacyl-tRNA Is Modulated by the Esterified Amino Acid† [My Copy] Biochemistry, Vol. 43, No. 20. (1 May 2004), pp. 6159-6166. by Taraka Dale, Lee E. Sanderson, Olke C. Uhlenbeck posted to trna ef-tu by jeargle on 2009-09-25 21:19:45 as
	Uniform Binding of Aminoacyl-tRNAs to Elongation Factor Tu by Thermodynamic Compensation [My Copy] Science, Vol. 294, No. 5540. (5 October 2001), pp. 165-168. by Frederick J. LaRiviere, Alexey D. Wolfson, Olke C. Uhlenbeck posted to trna ef-tu by jeargle on 2009-09-25 19:49:06 as
	Indirect Readout of tRNA for Aminoacylation† [My Copy] Biochemistry, Vol. 46, No. 37. (1 September 2007), pp. 10419-10432. by John J. Perona, Ya-Ming Hou posted to trna aars by jeargle on 2009-09-25 19:48:18 as
	Evolutionary relationship of archaebacteria, eubacteria, and eukaryotes inferred from phylogenetic trees of duplicated genes [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 86, No. 23. (December 1989), pp. 9355-9359. by N. Iwabe, K. Kuma, M. Hasegawa, S. Osawa, T. Miyata posted to rrna phylogenetic_tree evolution ef-tu archaea by jeargle on 2009-09-25 19:11:12 as
	Unusual modification patterns in the transfer ribonucleic acids of archaebacteria [My Copy] Current Microbiology, Vol. 4, No. 4. (1 July 1980), pp. 245-249. by Ramesh Gupta, Carl Woese posted to trna modified_nucleotides archaea by jeargle on 2009-09-25 19:09:07 as
	Atypical archaeal tRNA pyrrolysine transcript behaves towards EF-Tu as a typical elongator tRNA [My Copy] Nucl. Acids Res., Vol. 32, No. 3. (10 February 2004), pp. 1091-1096. by Anne Theobald-Dietrich, Magali Frugier, Richard Giege, Joelle Rudinger-Thirion posted to trna pyrrolysine methanosarcina ef-tu by jeargle on 2009-09-25 19:02:52 as
	Crystal structure of the ternary complex of Phe-tRNAPhe, EF-Tu, and a GTP analog. [My Copy] Science (New York, N.Y.), Vol. 270, No. 5241. (1 December 1995), pp. 1464-1472. by P. Nissen, M. Kjeldgaard, S. Thirup, et al.G. Polekhina, L. Reshetnikova, B. F. Clark, J. Nyborg posted to trna ef-tu crystal_structure by jeargle on 2009-09-25 18:58:00 as
	Dynamical networks in tRNA:protein complexes [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 16. (21 April 2009), pp. 6620-6625. by Anurag Sethi, John Eargle, Alexis A. Black, Zaida Luthey-Schulten posted to trna network md leurs glurs aars by jeargle on 2009-08-31 18:36:59 as along with 4 people and 2 groups anuragsethi AbnerCYH jmccammon sobolevnrm McCammon baker-group
	Dynamics of Recognition between tRNA and Elongation Factor Tu [My Copy] Journal of Molecular Biology, Vol. 377, No. 5. (11 April 2008), pp. 1382-1405. by John Eargle, Alexis A. Black, Anurag Sethi, Leonardo G. Trabuco, Zaida Luthey-Schulten posted to trna md ef-tu by jeargle on 2009-08-31 18:25:29 as along with 1 person and 1 group sobolevnrm baker-group
	MultiSeq: unifying sequence and structure data for evolutionary analysis [My Copy] BMC Bioinformatics, Vol. 7, No. 1. (16 August 2006), 382. by Elijah Roberts, John Eargle, Dan Wright, Zaida L. Schulten posted to structure sequence multiseq bioinformatics by jeargle on 2009-08-31 18:24:13 as along with 2 people yuslinaz eroberts00
	Multiple Alignment of protein structures and sequences for VMD [My Copy] Bioinformatics, Vol. 22, No. 4. (15 February 2006), pp. 504-506. by John Eargle, Dan Wright, Zaida Luthey-Schulten posted to structure sequence multiseq bioinformatics by jeargle on 2009-08-31 18:23:03 as along with 2 people and 2 groups dimka marcius BioinfoCIPF SGU-CIPF
	Visualizing the dual space of biological molecules [My Copy] Computational Biology and Chemistry, Vol. 30, No. 3. (June 2006), pp. 219-226. by John Eargle, Zaida Luthey-Schulten posted to voids visualization tessellation by jeargle on 2009-08-31 18:21:22 as

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trna	16
ef-tu	7
bioinformatics	5
aars	3
modified_nucleotides	3
rna	3
archaea	2
covariance_model	2
database	2
ebi	2
evolution	2
md	2
molecular_dynamics	2
multiseq	2
mutual_information	2
network	2
phylogenetic_tree	2
secondary_structure	2
sequence	2
structure	2
web_services	2
alignment	1
allostery	1
amphora	1
artificial_chemistry	1
bacteria	1
climate_change	1
correlation_analysis	1
crystal_structure	1
ecology	1
environment	1
escherichia_coli	1
genetic_code	1
glurs	1
ion	1
leurs	1
magnesium	1
methanosarcina	1
mitochondria	1
nmr	1
principal_component_analysis	1
pyrrolysine	1
rrna	1
sequence_alignment	1
tessellation	1
visualization	1
voids	1
water	1

jeargle's library 27 articles Export

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