CiteULike: jfr's D'assignies:MS [3 articles]

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	Robust interlaboratory reproducibility of a gene expression signature measurement consistent with the needs of a new generation of diagnostic tools [My Copy] BMC Genomics, Vol. 8 (07 June 2007), 148. by Robert A. Ach, Arno Floore, Bo Curry, et al.Vladimir Lazar, Annuska M. Glas, Rob Pover, Anya Tsalenko, Hugues Ripoche, Fatima Cardoso, Mahasti S. D'assignies, Laurakay Bruhn, Laura posted to boutique_arrays classification microarray_technology by jfr on 2007-12-06 11:25:04 as
	Strong time dependence of the 76-gene prognostic signature for node-negative breast cancer patients in the TRANSBIG multicenter independent validation series. [My Copy] Clinical cancer research : an official journal of the American Association for Cancer Research, Vol. 13, No. 11. (1 June 2007), pp. 3207-3214. by Christine Desmedt, Fanny Piette, Sherene Loi, et al.Yixin Wang, Françoise Lallemand, Benjamin Haibe-Kains, Giuseppe Viale, Mauro Delorenzi, Yi Zhang, Mahasti Saghatchian S. d'Assignies, Jonas Bergh, Rosette Lidereau, Paul Ellis, Adrian L. Harris, Jan G. Klijn, John A. Foekens, Fatima Cardoso, Martine J. Piccart, Marc Buyse, Christos Sotiriou, TRANSBIG Consortium posted to breast_cancer by jfr on 2007-11-23 15:23:08 as along with 4 people and 1 group giovenko vertikalist winterschlaefer frohike BTS-PT-AS-CS
	Validation and clinical utility of a 70-gene prognostic signature for women with node-negative breast cancer. [My Copy] Journal of the National Cancer Institute, Vol. 98, No. 17. (6 September 2006), pp. 1183-1192. by Marc Buyse, Sherene Loi, Laura van't Veer, et al.Giuseppe Viale, Mauro Delorenzi, Annuska M. Glas, Mahasti Saghatchian S. d'Assignies, Jonas Bergh, Rosette Lidereau, Paul Ellis, Adrian Harris, Jan Bogaerts, Patrick Therasse, Arno Floore, Mohamed Amakrane, Fanny Piette, Emiel Rutgers, Christos Sotiriou, Fatima Cardoso, Martine J. Piccart, TRANSBIG Consortium posted to breast_cancer classification validation by jfr on 2006-09-22 16:54:25 as along with 4 people giovenko csimmons laral frohike

breast_cancer	484
mirna	363
review	347
software	279
classification	276
colon_cancer	236
gene_expression	179
methodology	169
copy-number	163
network	148
integration	139
microarray_technology	133
clustering	125
bioinformatics	122
feature_selection	108
meta-analysis	97
affy	86
database	84
mirna_target	80
therapy	80
gene_set_analysis	71
array-cgh	69
crc_bib	69
regulation	67
low_level	66
rt-pcr	64
systems_biology	63
pathway_analysis	61
genomics	60
subtypes	58
annotation	57
snp-arrays	57
comment	54
quality_control	51
metastasis	49
normalization	46
mutations	43
prognosis	42
deep_sequencing	42
microarray_analysis	41
ffpe	41
estrogen	40
proteomics	39
cancer	38
statistics	37
bioconductor	37
progression	36
fdr	35
protein_interaction	35
alternative_splicing	35
markers	35
snp	34
r	33
methylation	32
standards	30
tamoxifen	28
class_discovery	28
mutation	28
mir17-92	26
exon_arrays	25
two-color	24
jfrbib	24
microarray_protocol	23
experiment_design	23
ovarian_cancer	23
brca	22
pathway	22
comparison	21
co-expression	21
kras	20
model	20
survival_analysis	20
tfbs	20
p53	20
treatment	19
functional_analysis	19
platform_comparison	18
multiple_testing	18
technology	17
illumina	17
chip-chip	16
stem_cell	16
biomarker	16
module_detection	16
evaluation	16
lung_cancer	16
jfrbib04-09	16
text-mining	15
nmf	15
antisense	15
reproducible_research	15
erbb	14
basal_subtype	14
sequencing	14
bio_signature	14
egfr	14
tma	13
rna_quality	13
maqc	13
stageii	13
staging	13
cell_line	13
cnv	12
marker	12
genotyping	12
gene_ontology	12
gene_lists	12
pten	11
loh	11
drug_discovery	11
proliferation	11
missing_values	11
genome_browser	11
semantic_web	11
protocol	11
tgfb	10
disease_genes	10
mirna_regulation	10
immunohistochemistry	10
tissue_specificity	10
visualization	10
control_genes	10
msi	9
inter-laboratory	9
segmentation	9
myc	9
probe_design	9
personalized_medicine	8
mir21	8
chip-seq	8
consensus_clustering	8
sample_size	8
editorial	8
can_genes	8
time-course	8
boutique_arrays	8
chemotherapy	8
e2f1	8
plos_rules	7
validation	7
serum	7
lymphoma	7
tiling_array	7
18q_loh	7
nci60	7
plos_start	7
go	7
er	7
non-coding	6
hpc	6
graphs	6
trial	6
leukemia	6
ontology	6
stem	6
gene_interaction	6
read_mapping	6
correlation	6
motif	6
community	6
promoters	6
prioritization	5
plos_primer	5
prostate_cancer	5
gwas	5
grid_computing	5
cross-platform	5
radiation	5
survival	5
functional_genomics	5
her2	5
gene_pairs	5
cin	5
machine_learning	5
resource	4
open-source	4
web_services	4
public_data	4
functional_classification	4
wnt	4
grading	4
biobank	4
image_analysis	4
mir192	4
mir34	4
mirna_cluster	4
data_curation	4
pr	4
lims	4
pooling	4
low-level	3
pca	3
small_molecule	3
hapmap	3
evolution	3
apc	3
letter	3
loops	3
svm	3
luminal_subtype	3
confounders	3
filtering	3
mass_spec	3
ontologies	3
biomarkers	3
pik3ca	3
web_server	3
tutorial	3
8q24	3
primer	3
er-positive	3
sage	3
chromatin	3
outlier	3
projection	3
epigenetics	3
stability	3
bim	3
sop	3
stroma	3
copa	3
glioblastoma	3
in-situ	3
micro_environment	3
triple_negative	3
roc	3
ngs	3
interaction	3
mage	3
agilent	3
cross-study	3
protein_networks	2
mir20a	2
dfs	2
rin	2
cetuximab	2
cell_cycle	2
cloud_computing	2
stageiii	2
oncomine	2
20q	2
estradiol	2
mir145	2
smad	2
cdk8	2
snp_arrays	2
local_recurrence	2
microarray_data	2
caching	2
target	2
diagnostic	2
akt	2
thyroid	2
lymphocytes	2
serm	2
web_resource	2
permutations	2
bcatenin	2
chemo	2
mutual_information	2
compression	2
fgfr2	2
protein_microarray	2
differential_expression	2
rb	2
sweave	2
ranked_lists	2
qtl	2
meeting_report	2
tbfs	2
recommendation	2
upd	2
mir215	2
translational	2
dna_damage	2
mir143	2
flow_cytometry	2
semi-supervised	2
priors	2
batch-effect	2
alignment	2
stem_cells	2
gene_fusion	2
guidelines	2
ephb	2
cables1	1
mixture_models	1
graph_approach	1
peripheral_blood	1
data_mining	1
thyroid_cancer	1
fantom	1
signaling	1
mir216a	1
translation	1
mir-106b-25	1
assembly	1
smad7	1
breas_cancer	1
pre-post	1
circulating_tumor_cells	1
neural_networks	1
ndrg4	1
oncogene_addiction	1
mirna221	1
eno1	1
melanoma	1
ccnd1	1
gene_clusters	1
454	1
gene_function_prediction	1
bmp	1
mirna_discovery	1
brain_cancer	1
taxane	1
stat3	1
mrna-seq	1
latent	1
mir16-1	1
formalization	1
met	1
disease	1
ecm	1
er-negative	1
randomization	1
classifier	1
distance	1
formats	1
mir135	1
mapk14	1
mir31	1
xml	1
invasion	1
bayesian	1
nomogram	1
ucs	1
aurora_kinase	1
translocation	1
il8	1
mir217	1
cross_platform	1
news	1
gene_networks	1
simulation	1
markup	1
grade_index	1
early-stage	1
mir203	1
transfection	1
single_cell	1
association_studies	1
mcm7	1
ependymoma	1
hypoxia	1
concordance	1
microrna	1
mir101	1
genetics	1
mir15a	1
genome_assembly	1
resampling	1
myb	1
tcga	1
rnai	1
aging	1
model-based	1
est_analysis	1
mir155	1
gastric_cancer	1
mir126	1
bambi	1
latex	1
fish	1
ensemble	1
dimension_reduction	1
asco	1
mirna_pathway	1
pattern_discovery	1
mir196a-2	1
braf	1
wiki	1
pbc	1
aroma	1
study_design	1
clusterin	1
sampling	1
data_publication	1
oncogene	1
mirna222	1
dcc	1
mir199	1
gene_ranking	1
mir449	1
target_discovery	1
cross-species	1
funding	1
fgf10	1
au-rich	1
apoptosis	1
module	1
biclustering	1
beads	1
pancreatic_cancer	1
rna-interference	1
genoty	1
reproducibility	1
dasl	1
python	1
lin28	1
cervical_cancer	1
shrna	1
13q	1
perturbation	1
dye_bias	1
meta_analysis	1
network_analysis	1
p21	1
in_situ_hybridization	1
metastatis	1
passenger_genes	1
cancer_hallmarks	1
tissue_origin	1
modules	1
selection_bias	1
plasma	1
3utr	1
pilot_study	1
erg	1
power_analysis	1
driver_genes	1
metagene	1
ret	1
prb	1

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