jfr's Park [41 articles] Export Sort

Recent papers posted to jfr's library by the author Park. You can also see everyone's Park.

Hide details

	Gradient lasso for Cox proportional hazards model [My Copy] Bioinformatics, Vol. 25, No. 14. (15 July 2009), pp. 1775-1781. by Insuk Sohn, Jinseog Kim, Sin-Ho Jung, Changyi Park posted to survival_analysis statistics by jfr on 2009-11-16 13:43:32 as along with 3 people rdiaz reconnie neils
	Functional links between clustered microRNAs: suppression of cell-cycle inhibitors by microRNA clusters in gastric cancer [My Copy] Nucl. Acids Res., Vol. 37, No. 5. (1 April 2009), pp. 1672-1681. by Young-Kook Kim, Jieun Yu, Tae S. Han, et al.Seong-Yeon Park, Bumjin Namkoong, Dong H. Kim, Keun Hur, Moon-Won Yoo, Hyuk-Joon Lee, Han-Kwang Yang, V. Narry Kim posted to mirna_cluster mirna gastric_cancer by jfr on 2009-09-30 10:00:08 as along with 4 people and 1 group cyanth ealloza pengchy samgj microRNA
	Enhanced identification and biological validation of differential gene expression via Illumina whole-genome expression arrays through the use of the model-based background correction methodology. [My Copy] Nucleic acids research, Vol. 36, No. 10. (1 June 2008), e58. by Liang-Hao H. Ding, Yang Xie, Seongmi Park, Guanghua Xiao, Michael D. Story posted to illumina low_level by jfr on 2009-07-22 12:47:22 as along with 4 people shikin ptrobajo inesdesantiago guhjy
	DNA copy number alterations and expression of relevant genes in triple-negative breast cancer. [My Copy] Genes, chromosomes & cancer, Vol. 47, No. 6. (June 2008), pp. 490-499. by W. Han, E. M. Jung, J. Cho, et al.J. W. Lee, K. T. Hwang, S. J. Yang, J. J. Kang, J. Y. Bae, Y. K. Jeon, I. A. Park, M. Nicolau, S. S. Jeffrey, D. Y. Noh posted to breast_cancer copy-number triple_negative by jfr on 2009-06-24 10:49:09 as
	CGHweb: a tool for comparing DNA copy number segmentations from multiple algorithms [My Copy] Bioinformatics, Vol. 24, No. 7. (1 April 2008), pp. 1014-1015. by Weil Lai, Vidhu Choudhary, Peter J. Park posted to array-cgh copy-number segmentation snp-arrays software by jfr on 2009-06-16 17:04:14 as along with 1 person alefox
	Network-based inference of cancer progression from microarray data. [My Copy] IEEE/ACM transactions on computational biology and bioinformatics / IEEE, ACM, Vol. 6, No. 2. (n 2009), pp. 200-212. by Y. Park, S. Shackney, R. Schwartz posted to microarray_analysis network progression by jfr on 2009-06-09 17:10:23 as
	New evaluation measures for multifactor dimensionality reduction classifiers in gene-gene interaction analysis [My Copy] Bioinformatics, Vol. 25, No. 3. (1 February 2009), pp. 338-345. by Junghyun Namkung, Kyunga Kim, Sungon Yi, Wonil Chung, Min-Seok Kwon, Taesung Park posted to classification by jfr on 2009-04-20 10:28:34 as along with 3 people rdiaz daforerog pkonings
	Overexpression of DRG2 increases G2/M phase cells and decreases sensitivity to nocodazole-induced apoptosis. [My Copy] Journal of biochemistry, Vol. 135, No. 3. (March 2004), pp. 331-335. by H. Song, S. I. Kim, M. S. Ko, et al.H. J. Kim, J. C. Heo, H. J. Lee, H. S. Lee, I. S. Han, K. Kwack, J. W. Park posted to crc_bib by jfr on 2009-03-30 09:19:30 as
	HCCR-1-interacting molecule "deleted in polyposis 1" plays a tumor-suppressor role in colon carcinogenesis. [My Copy] Gastroenterology, Vol. 130, No. 7. (June 2006), pp. 2074-2086. by S. M. Shin, Y. J. Chung, S. T. Oh, et al.H. M. Jeon, L. J. Hwang, H. Namkoong, H. K. Kim, G. W. Cho, S. Y. Hur, T. E. Kim, Y. S. Lee, Y. G. Park, J. Ko, J. W. Kim posted to crc_bib by jfr on 2009-03-30 09:18:04 as
	Design and analysis of ChIP-seq experiments for DNA-binding proteins. [My Copy] Nature biotechnology, Vol. 26, No. 12. (16 December 2008), pp. 1351-1359. by Peter V. Kharchenko, Michael Y. Tolstorukov, Peter J. Park posted to chip-seq r software by jfr on 2009-03-12 15:06:29 as along with 19 people and 2 groups hzoltan stubrown guhjy gdb tonamswish ewilban1 coela ekotelnikova floatingpoint idonaldson inesdesantiago WanderingAengus vplagnol xwbcn fpattyn mutagenic kengg rschulz ghattem KCL & UCL Bioinformatics SIMR bioinformatics
	MicroRNAs: key players in the immune system, differentiation, tumorigenesis and cell death. [My Copy] Oncogene, Vol. 27, No. 45. (9 October 2008), pp. 5959-5974. by R. Schickel, B. Boyerinas, S. M. Park, M. E. Peter posted to mirna review by jfr on 2009-02-18 13:11:19 as along with 4 people and 1 group ealloza valeriehilgers fpattyn jsnowdon microRNA
	Integrative analysis reveals the direct and indirect interactions between DNA copy number aberrations and gene expression changes [My Copy] Bioinformatics, Vol. 24, No. 7. (1 April 2008), pp. 889-896. by Hyunju Lee, Sek W. Kong, Peter J. Park posted to gene_expression integration copy-number by jfr on 2009-01-07 11:33:23 as along with 9 people yina rdiaz Zephyrus jcaddy ealloza barriot ptrobajo frohike srp33
	Tissue-dependent paired expression of miRNAs. [My Copy] Nucleic Acids Res (28 August 2007) by Seungil Ro, Chanjae Park, David Young, Kenton M M. Sanders, Wei Yan posted to mirna tissue_specificity by jfr on 2008-11-28 14:24:20 as along with 2 people and 1 group andersbj sebastien_vigneau microRNA
	The Cables Gene on Chromosome 18q Is Silenced by Promoter Hypermethylation and Allelic Loss in Human Colorectal Cancer [My Copy] American Journal of Pathology, Vol. 171, No. 5. (1 November 2007), pp. 1509-1519. by Park, Do Youn, Sakamoto, et al. Hideo, Kirley, D. Sandra, Ogino, Shuji, Kawasaki, Takako, Kwon, Eunjeong, Mino-Kenudson, Mari, Lauwers, Y. Gregory, Chung, C. Daniel, Rueda, R. Bo, Zukerberg, R. Lawrence posted to 18q_loh cables1 colon_cancer loh by jfr on 2008-11-26 17:53:14 as
	Integrated analysis of homozygous deletions, focal amplifications, and sequence alterations in breast and colorectal cancers. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 105, No. 42. (21 October 2008), pp. 16224-16229. by Rebecca J. Leary, Jimmy C. Lin, Jordan Cummins, et al.Simina Boca, Laura D. Wood, D. Williams Parsons, Siân Jones, Tobias Sjöblom, Ben-Ho H. Park, Ramon Parsons, Joseph Willis, Dawn Dawson, James K. Willson, Tatiana Nikolskaya, Yuri Nikolsky, Levy Kopelovich, Nick Papadopoulos, Len A. Pennacchio, Tian-Li L. Wang, Sanford D. Markowitz, Giovanni Parmigiani, Kenneth W. Kinzler, Bert Vogelstein, Victor E. Velculescu posted to breast_cancer colon_cancer copy-number gene_expression integration mutation by jfr on 2008-11-26 17:38:57 as along with 4 people and 2 groups shikin Zephyrus wimufi songpku Roswell Cancer Crosstalk Breast Cancer Reading Club
	High-Quality Binary Protein Interaction Map of the Yeast Interactome Network [My Copy] Science, Vol. 322, No. 5898. (3 October 2008), pp. 104-110. by Haiyuan Yu, Pascal Braun, Muhammed A. Yildirim, et al.Irma Lemmens, Kavitha Venkatesan, Julie Sahalie, Tomoko Hirozane-Kishikawa, Fana Gebreab, Na Li, Nicolas Simonis, Tong Hao, Jean-Francois Rual, Amelie Dricot, Alexei Vazquez, Ryan R. Murray, Christophe Simon, Leah Tardivo, Stanley Tam, Nenad Svrzikapa, Changyu Fan, Anne-Sophie de Smet, Adriana Motyl, Michael E. Hudson, Juyong Park, Xiaofeng Xin, Michael E. Cusick, Troy Moore, Charlie Boone, Michael Snyder, Frederick P. Roth, Albert-Laszlo Barabasi, Jan Tavernier, David E. Hill, Marc Vidal posted to network protein_interaction by jfr on 2008-11-24 16:46:32 as along with 28 people and 1 group icecrown aceol mgomes nzm pauldobson cabbagezs mariap3636 semin roys phoenixzxl kintoki jbhiatt elenaz ocs cerca ptrobajo carlk zwang gracio reyez mdperry dullhunk Petersarkies grahamc yeastyboy guhjy maralena neils BenosLab
	Regulatory networks define phenotypic classes of human stem cell lines [My Copy] Nature (24 August 2008) by Franz-Josef Müller, Louise C. Laurent, Dennis Kostka, et al.Igor Ulitsky, Roy Williams, Christina Lu, In-Hyun Park, Mahendra S. Rao, Ron Shamir, Philip H. Schwartz, Nils O. Schmidt, Jeanne F. Loring posted to network stem by jfr on 2008-11-06 09:47:50 as along with 11 people and 1 group zufar isimpson guhjy zwang ajaymalik ptrobajo heliopais wsjames roys tmmurali caseybrown Oxford Virology
	Stromal gene expression predicts clinical outcome in breast cancer. [My Copy] Nature medicine, Vol. 14, No. 5. (May 2008), pp. 518-527. by Greg Finak, Nicholas Bertos, Francois Pepin, et al.Svetlana Sadekova, Margarita Souleimanova, Hong Zhao, Haiying Chen, Gulbeyaz Omeroglu, Sarkis Meterissian, Atilla Omeroglu, Michael Hallett, Morag Park posted to breast_cancer classification prognosis stroma by jfr on 2008-09-19 15:16:16 as along with 5 people Zephyrus tmmurali frohike ptrobajo aviad_work
	Genome-wide promoter analysis uncovers portions of the cancer methylome. [My Copy] Cancer research, Vol. 68, No. 8. (15 April 2008), pp. 2661-2670. by M. O. Hoque, M. S. Kim, K. L. Ostrow, et al.J. Liu, G. B. Wisman, H. L. Park, M. L. Poeta, C. Jeronimo, R. Henrique, A. Lendvai, E. Schuuring, S. Begum, E. Rosenbaum, M. Ongenaert, K. Yamashita, J. Califano, W. Westra, A. G. van der Zee, W. Van Criekinge, D. Sidransky posted to methylation by jfr on 2008-06-17 18:00:18 as
	Transcriptional recapitulation and subversion of embryonic colon development by mouse colon tumor models and human colon cancer [My Copy] Genome Biology, Vol. 8 (05 July 2007), R131. by Sergio Kaiser, Young-Kyu Park, Jeffrey L. Franklin, et al.Richard B. Halberg, Ming Yu, Walter J. Jessen, Johannes Freudenberg, Xiaodi Chen, Kevin Haigis, Anil G. Jegga, Sue Kong, Bhuvaneswari Sakthivel, Huan Xu, Timothy Reichling, Mohammad Azhar, Gregory P. Boivin, Reade B. Roberts, Anika Bissahoyo, Fausto Gonzales, Greg L. Bloom, Stephen Eschrich, Scott L. Carter, Jeremy E. Aronow, John Kleimeyer, Michael Kleimeyer, Vivek Ramaswamy, Stephen H. Settle, Braden Boone, Shawn Levy, Jonathan M. Graff, Thomas Doetschman, Joanna Groden, William F. Dove, David W. Threadgill, Timothy J. Yeatman, Robert J. Coffey, Bruce J. Aronow posted to colon_cancer gene_expression progression by jfr on 2008-05-04 22:05:23 as along with 2 people slevy03 vmsr
	Response projected clustering for direct association with physiological and clinical response data [My Copy] BMC Bioinformatics, Vol. 9 (31 January 2008), 76. by Sung-Gon Yi, Taesung Park, Jae K. Lee posted to clustering methodology by jfr on 2008-04-28 16:22:17 as along with 1 person guhjy
	Chromosomal imbalances in the colorectal carcinomas with microsatellite instability. [My Copy] Am J Pathol, Vol. 163, No. 4. (October 2003), pp. 1429-1436. by L. S. Li, N. G. Kim, S. H. Kim, et al.C. Park, H. Kim, H. J. Kang, K. H. Koh, S. N. Kim, W. H. Kim, N. K. Kim, H. Kim posted to colon_cancer copy-number msi by jfr on 2008-02-13 17:05:19 as
	Whole genome analysis for liver metastasis gene signatures in colorectal cancer. [My Copy] Int J Cancer, Vol. 121, No. 9. (1 November 2007), pp. 2005-2012. by D. H. Ki, H. C. Jeung, C. H. Park, et al.S. H. Kang, G. Y. Lee, W. S. Lee, N. K. Kim, H. C. Chung, S. Y. Rha posted to colon_cancer gene_expression metastasis by jfr on 2008-02-13 13:48:25 as
	Oligonucleotide microarray analysis of distinct gene expression patterns in colorectal cancer tissues harboring BRAF and K-ras mutations [My Copy] Carcinogenesis, Vol. 27, No. 3. (March 2006), pp. 392-404. by Il-Jin Kim, Hio C. Kang, Kun Kim, et al.Sun-A Ahn, Hyun-Ju Yoon, Sang N. Yoon, Jae-Gahb Park posted to colon_cancer gene_expression by jfr on 2008-02-12 16:05:33 as along with 1 person srp33
	The Genomic Landscapes of Human Breast and Colorectal Cancers. [My Copy] Science (11 October 2007) by Laura D D. Wood, D Williams W. Parsons, Siân Jones, et al.Jimmy Lin, Tobias Sjöblom, Rebecca J J. Leary, Dong Shen, Simina M M. Boca, Thomas Barber, Janine Ptak, Natalie Silliman, Steve Szabo, Zoltan Dezso, Vadim Ustyanksky, Tatiana Nikolskaya, Yuri Nikolsky, Rachel Karchin, Paul A A. Wilson, Joshua S S. Kaminker, Zemin Zhang, Randal Croshaw, Joseph Willis, Dawn Dawson, Michail Shipitsin, James K V K. Willson, Saraswati Sukumar, Kornelia Polyak, Ben Ho H. Park, Charit L L. Pethiyagoda, P V Krishna V. Pant, Dennis G G. Ballinger, Andrew B B. Sparks, James Hartigan, Douglas R R. Smith, Erick Suh, Nickolas Papadopoulos, Phillip Buckhaults, Sanford D D. Markowitz, Giovanni Parmigiani, Kenneth W W. Kinzler, Victor E E. Velculescu, Bert Vogelstein posted to breast_cancer colon_cancer crc_bib genomics mutations by jfr on 2008-01-23 14:47:37 as along with 18 people and 1 group torfinnnome zufar ssgong daed guhjy tmmurali rdiaz eisei ramensky massivemayhem bioyang cabbagezs xingxu shikin renatomilani gwenknight cerami srp33 VUMCGenomics
	Genome-wide combination profiling of copy number and methylation offers an approach for deciphering misregulation and development in cancer cells. [My Copy] Gene, Vol. 407, No. 1-2. (15 January 2008), pp. 139-147. by J. J. Park, J. K. Kang, S. Hong, et al.E. S. Ryu, J. I. Kim, J. H. Lee, J. S. Seo posted to copy-number integration methylation by jfr on 2007-12-19 09:26:11 as
	arrayQCplot: software for checking the quality of microarray data. [My Copy] Bioinformatics (Oxford, England), Vol. 22, No. 18. (15 September 2006), pp. 2305-2307. by Eun-Kyung K. Lee, Sung-Gon G. Yi, Taesung Park posted to low_level quality_control software by jfr on 2007-12-05 10:35:09 as along with 2 people shikin daforerog
	A multivariate approach for integrating genome-wide expression data and biological knowledge [My Copy] Bioinformatics, Vol. 22, No. 19. (1 October 2006), pp. 2373-2380. by Sek W. Kong, William T. Pu, Peter J. Park posted to gene_set_analysis by jfr on 2007-11-20 16:10:25 as along with 4 people and 1 group kemalpak tonamswish ealloza aconesa BioinfoCIPF
	Exploratory methods for checking quality of microarray data. [My Copy] Bioinformation, Vol. 1, No. 10. (2007), pp. 423-428. by E. K. Lee, T. Park posted to affy quality_control by jfr on 2007-09-05 11:43:20 as
	Network-based analysis of affected biological processes in type 2 diabetes models. [My Copy] PLoS genetics, Vol. 3, No. 6. (1 June 2007), e96. by Manway Liu, Arthur Liberzon, Sek Won W. Kong, et al.Weil R. Lai, Peter J. Park, Isaac S. Kohane, Simon Kasif posted to gene_set_analysis network systems_biology by jfr on 2007-08-02 14:31:01 as along with 4 people yaredo tmmurali ajgentles dragonrez
	An extensive comparison of recent classification tools applied to microarray data [My Copy] Computational Statistics & Data Analysis, Vol. 48, No. 4. (1 April 2005), pp. 869-885. by Jae W. Lee, Jung B. Lee, Mira Park, Seuck H. Song posted to classification methodology review by jfr on 2007-08-02 14:04:12 as along with 2 people rdiaz mayercd
	Identification and analysis of functional elements in 1% of the human genome by the ENCODE pilot project. [My Copy] Nature, Vol. 447, No. 7146. (14 June 2007), pp. 799-816. by ENCODE Project Consortium, Ewan Birney, John A. Stamatoyannopoulos, et al.Anindya Dutta, Roderic Guigó, Thomas R. Gingeras, Elliott H. Margulies, Zhiping Weng, Michael Snyder, Emmanouil T. Dermitzakis, Robert E. Thurman, Michael S. Kuehn, Christopher M. Taylor, Shane Neph, Christoph M. Koch, Saurabh Asthana, Ankit Malhotra, Ivan Adzhubei, Jason A. Greenbaum, Robert M. Andrews, Paul Flicek, Patrick J. Boyle, Hua Cao, Nigel P. Carter, Gayle K. Clelland, Sean Davis, Nathan Day, Pawandeep Dhami, Shane C. Dillon, Michael O. Dorschner, Heike Fiegler, Paul G. Giresi, Jeff Goldy, Michael Hawrylycz, Andrew Haydock, Richard Humbert, Keith D. James, Brett E. Johnson, Ericka M. Johnson, Tristan T. Frum, Elizabeth R. Rosenzweig, Neerja Karnani, Kirsten Lee, Gregory C. Lefebvre, Patrick A. Navas, Fidencio Neri, Stephen C. Parker, Peter J. Sabo, Richard Sandstrom, Anthony Shafer, David Vetrie, Molly Weaver, Sarah Wilcox, Man Yu, Francis S. Collins, Job Dekker, Jason D. Lieb, Thomas D. Tullius, Gregory E. Crawford, Shamil Sunyaev, William S. Noble, Ian Dunham, France Denoeud, Alexandre Reymond, Philipp Kapranov, Joel Rozowsky, Deyou Zheng, Robert Castelo, Adam Frankish, Jennifer Harrow, Srinka Ghosh, Albin Sandelin, Ivo L. Hofacker, Robert Baertsch, Damian Keefe, Sujit Dike, Jill Cheng, Heather A. Hirsch, Edward A. Sekinger, Julien Lagarde, Josep F. Abril, Atif Shahab, Christoph Flamm, Claudia Fried, Jörg Hackermüller, Jana Hertel, Manja Lindemeyer, Kristin Missal, Andrea Tanzer, Stefan Washietl, Jan Korbel, Olof Emanuelsson, Jakob S. Pedersen, Nancy Holroyd, Ruth Taylor, David Swarbreck, Nicholas Matthews, Mark C. Dickson, Daryl J. Thomas, Matthew T. Weirauch, James Gilbert, Jorg Drenkow, Ian Bell, XiaoDong Zhao, K. G. Srinivasan, Wing-Kin K. Sung, Hong Sain S. Ooi, Kuo Ping P. Chiu, Sylvain Foissac, Tyler Alioto, Michael Brent, Lior Pachter, Michael L. Tress, Alfonso Valencia, Siew Woh W. Choo, Chiou Yu Y. Choo, Catherine Ucla, Caroline Manzano, Carine Wyss, Evelyn Cheung, Taane G. Clark, James B. Brown, Madhavan Ganesh, Sandeep Patel, Hari Tammana, Jacqueline Chrast, Charlotte N. Henrichsen, Chikatoshi Kai, Jun Kawai, Ugrappa Nagalakshmi, Jiaqian Wu, Zheng Lian, Jin Lian, Peter Newburger, Xueqing Zhang, Peter Bickel, John S. Mattick, Piero Carninci, Yoshihide Hayashizaki, Sherman Weissman, Tim Hubbard, Richard M. Myers, Jane Rogers, Peter F. Stadler, Todd M. Lowe, Chia-Lin L. Wei, Yijun Ruan, Kevin Struhl, Mark Gerstein, Stylianos E. Antonarakis, Yutao Fu, Eric D. Green, Ulaş Karaöz, Adam Siepel, James Taylor, Laura A. Liefer, Kris A. Wetterstrand, Peter J. Good, Elise A. Feingold, Mark S. Guyer, Gregory M. Cooper, George Asimenos, Colin N. Dewey, Minmei Hou, Sergey Nikolaev, Juan I. Montoya-Burgos, Ari Löytynoja, Simon Whelan, Fabio Pardi, Tim Massingham, Haiyan Huang, Nancy R. Zhang, Ian Holmes, James C. Mullikin, Abel Ureta-Vidal, Benedict Paten, Michael Seringhaus, Deanna Church, Kate Rosenbloom, W. James Kent, Eric A. Stone, NISC Comparative Sequencing Program, Baylor College of Medicine Human Genome Sequencing Center, Washington University Genome Sequencing Center, Broad Institute, Children's Hospital Oakland Research Institute, Serafim Batzoglou, Nick Goldman, Ross C. Hardison, David Haussler, Webb Miller, Arend Sidow, Nathan D. Trinklein, Zhengdong D. Zhang, Leah Barrera, Rhona Stuart, David C. King, Adam Ameur, Stefan Enroth, Mark C. Bieda, Jonghwan Kim, Akshay A. Bhinge, Nan Jiang, Jun Liu, Fei Yao, Vinsensius B. Vega, Charlie W. Lee, Patrick Ng, Atif Shahab, Annie Yang, Zarmik Moqtaderi, Zhou Zhu, Xiaoqin Xu, Sharon Squazzo, Matthew J. Oberley, David Inman, Michael A. Singer, Todd A. Richmond, Kyle J. Munn, Alvaro Rada-Iglesias, Ola Wallerman, Jan Komorowski, Joanna C. Fowler, Phillippe Couttet, Alexander W. Bruce, Oliver M. Dovey, Peter D. Ellis, Cordelia F. Langford, David A. Nix, Ghia Euskirchen, Stephen Hartman, Alexander E. Urban, Peter Kraus, Sara Van Calcar, Nate Heintzman, Tae Hoon H. Kim, Kun Wang, Chunxu Qu, Gary Hon, Rosa Luna, Christopher K. Glass, M. Geoff Rosenfeld, Shelley Force F. Aldred, Sara J. Cooper, Anason Halees, Jane M. Lin, Hennady P. Shulha, Xiaoling Zhang, Mousheng Xu, Jaafar N. Haidar, Yong Yu, Yijun Ruan, Vishwanath R. Iyer, Roland D. Green, Claes Wadelius, Peggy J. Farnham, Bing Ren, Rachel A. Harte, Angie S. Hinrichs, Heather Trumbower, Hiram Clawson, Jennifer Hillman-Jackson, Ann S. Zweig, Kayla Smith, Archana Thakkapallayil, Galt Barber, Robert M. Kuhn, Donna Karolchik, Lluis Armengol, Christine P. Bird, Paul I. de Bakker, Andrew D. Kern, Nuria Lopez-Bigas, Joel D. Martin, Barbara E. Stranger, Abigail Woodroffe, Eugene Davydov, Antigone Dimas, Eduardo Eyras, Ingileif B. Hallgrímsdóttir, Julian Huppert, Michael C. Zody, Gonçalo R. Abecasis, Xavier Estivill, Gerard G. Bouffard, Xiaobin Guan, Nancy F. Hansen, Jacquelyn R. Idol, Valerie V. Maduro, Baishali Maskeri, Jennifer C. McDowell, Morgan Park, Pamela J. Thomas, Alice C. Young, Robert W. Blakesley, Donna M. Muzny, Erica Sodergren, David A. Wheeler, Kim C. Worley, Huaiyang Jiang, George M. Weinstock, Richard A. Gibbs, Tina Graves, Robert Fulton, Elaine R. Mardis, Richard K. Wilson, Michele Clamp, James Cuff, Sante Gnerre, David B. Jaffe, Jean L. Chang, Kerstin Lindblad-Toh, Eric S. Lander, Maxim Koriabine, Mikhail Nefedov, Kazutoyo Osoegawa, Yuko Yoshinaga, Baoli Zhu, Pieter J. de Jong posted to genomics by jfr on 2007-07-31 14:49:24 as along with 25 people and 2 groups bartjacobse daveGerrard daforerog isimpson sharpton jessopher timhubbard scjparker polivares coela ilyashl aprasad myrtilus daed waszak guhjy chad_davis kengg olympos blobbybirdman shikin fpattyn yevishere elfar eskay Bioinformatics UH - Computational Biology
	Robust imputation method for missing values in microarray data. [My Copy] BMC Bioinformatics, Vol. 8 Suppl 2 (2007) by D. Yoon, E. K. Lee, T. Park posted to missing_values by jfr on 2007-07-19 17:54:15 as along with 1 person guhjy
	Error-pooling-based statistical methods for identifying novel temporal replication profiles of human chromosomes observed by DNA tiling arrays. [My Copy] Nucleic Acids Res, Vol. 35, No. 9. (2007) by T. Park, Y. Kim, S. Bekiranov, J. K. Lee posted to tiling_array by jfr on 2007-07-10 17:09:26 as
	Gene expression signatures of morphologically normal breast tissue identify basal-like tumors [My Copy] Breast Cancer Research, Vol. 8 (20 October 2006), R58. by Greg Finak, Svetlana Sadekova, Francois Pepin, et al.Michael Hallett, Sarkis Meterissian, Fawaz Halwani, Karim Khetani, Margarita Souleimanova, Brent Zabolotny, Atilla Omeroglu, Morag Park posted to breast_cancer by jfr on 2007-06-26 14:04:16 as
	Heterologous tissue culture expression signature predicts human breast cancer prognosis. [My Copy] PLoS ONE, Vol. 2 (2007) by E. S. Park, J. S. Lee, H. G. Woo, et al.F. Zhan, J. H. Shih, J. D. Shaughnessy, J. Frederic Mushinski posted to bio_signature breast_cancer meta-analysis by jfr on 2007-06-08 09:32:25 as along with 2 people Ao_Li2007 jayster4
	Gene selection using support vector machines with non-convex penalty. [My Copy] Bioinformatics, Vol. 22, No. 1. (1 January 2006), pp. 88-95. by H. H. Zhang, J. Ahn, X. Lin, C. Park posted to feature_selection classification by jfr on 2007-01-12 13:48:06 as along with 1 person chad_davis
	Combining multiple microarrays in the presence of controlling variables. [My Copy] Bioinformatics, Vol. 22, No. 14. (15 July 2006), pp. 1682-1689. by T. Park, S. G. Yi, Y. K. Shin, S. Lee posted to methodology meta-analysis by jfr on 2007-01-10 10:52:41 as
	Averaged gene expressions for regression. [My Copy] Biostatistics (Oxford, England), Vol. 8, No. 2. (11 April 2007), pp. 212-227. by Mee Young Y. Park, Trevor Hastie, Robert Tibshirani posted to feature_selection classification by jfr on 2007-01-09 11:48:19 as along with 1 person bertelsen
	The Consensus Coding Sequences of Human Breast and Colorectal Cancers [My Copy] Science, Vol. 314, No. 5797. (13 October 2006), pp. 268-274. by Tobias Sjoblom, Sian Jones, Laura D. Wood, et al.Williams D. Parsons, Jimmy Lin, Thomas Barber, Diana Mandelker, Rebecca J. Leary, Janine Ptak, Natalie Silliman, Steve Szabo, Phillip Buckhaults, Christopher Farrell, Paul Meeh, Sanford D. Markowitz, Joseph Willis, Dawn Dawson, James K. Willson, Adi F. Gazdar, James Hartigan, Leo Wu, Changsheng Liu, Giovanni Parmigiani, Ben H. Park, Kurtis E. Bachman, Nickolas Papadopoulos, Bert Vogelstein, Kenneth W. Kinzler, Victor E. Velculescu posted to breast_cancer colon_cancer crc_bib mutations by jfr on 2006-11-08 11:16:44 as along with 23 people and 1 group torfinnnome backlin alessandrobrozzi wimufi aalibes bicko tuck balajis nickluscombe rdiaz eisei jackjackjjj vicsta jtaylor emb51 ramensky massivemayhem cerami xingxu mingzhi chrisamiller frohike gwenknight EBI-regulation
	A sequence-oriented comparison of gene expression measurements across different hybridization-based technologies [My Copy] Nature Biotechnology, Vol. 24, No. 7. (02 July 2006), pp. 832-840. by Winston P. Kuo, Fang Liu, Jeff Trimarchi, et al.Claudio Punzo, Michael Lombardi, Jasjit Sarang, Mark E. Whipple, Malini Maysuria, Kyle Serikawa, Sun Y. Lee, Donald Mccrann, Jason Kang, Jeffrey R. Shearstone, Jocelyn Burke, Daniel J. Park, Xiaowei Wang, Trent L. Rector, Paola Ricciardi-Castagnoli, Steven Perrin, Sangdun Choi, Roger Bumgarner, Ju H. Kim, Glenn F. Short, Mason W. Freeman, Brian Seed, Roderick Jensen, George M. Church, Eivind Hovig, Connie L. Cepko, Peter Park, Lucila Ohno-Machado, Tor-Kristian Jenssen posted to annotation by jfr on 2006-11-06 16:02:21 as along with 3 people and 2 groups heliopais dchughes stsaft G4ID Genetics-of-Gambling

Note: You may cite this page as: http://www.citeulike.org/user/jfr/author/Park

Sort by:
Order:	Default Ascending Descending
Empty fields:	Default First Last

breast_cancer	483
mirna	356
review	347
software	279
classification	275
colon_cancer	236
gene_expression	179
methodology	169
copy-number	162
network	148
integration	139
microarray_technology	133
clustering	125
bioinformatics	122
feature_selection	107
meta-analysis	97
affy	86
database	84
therapy	80
mirna_target	79
gene_set_analysis	71
crc_bib	69
array-cgh	69
regulation	67
low_level	66
rt-pcr	64
systems_biology	63
pathway_analysis	61
genomics	60
subtypes	58
annotation	57
snp-arrays	57
comment	54
quality_control	51
metastasis	48
normalization	46
mutations	43
deep_sequencing	42
prognosis	42
ffpe	41
microarray_analysis	41
estrogen	40
proteomics	39
cancer	38
bioconductor	37
statistics	37
progression	36
alternative_splicing	35
protein_interaction	35
fdr	35
markers	35
snp	34
r	33
methylation	32
standards	30
class_discovery	28
mutation	28
tamoxifen	28
exon_arrays	25
mir17-92	25
jfrbib	24
two-color	24
experiment_design	23
ovarian_cancer	23
microarray_protocol	23
pathway	22
comparison	21
co-expression	21
brca	21
tfbs	20
model	20
kras	20
survival_analysis	20
treatment	19
functional_analysis	19
p53	19
platform_comparison	18
multiple_testing	18
technology	17
illumina	17
module_detection	16
biomarker	16
stem_cell	16
jfrbib04-09	16
evaluation	16
chip-chip	16
text-mining	15
nmf	15
antisense	15
reproducible_research	15
sequencing	14
erbb	14
bio_signature	14
basal_subtype	14
stageii	13
maqc	13
tma	13
staging	13
cell_line	13
rna_quality	13
lung_cancer	13
egfr	13
gene_lists	12
marker	12
gene_ontology	12
cnv	12
genotyping	12
proliferation	11
loh	11
genome_browser	11
drug_discovery	11
semantic_web	11
pten	11
protocol	11
missing_values	11
visualization	10
mirna_regulation	10
tissue_specificity	10
disease_genes	10
immunohistochemistry	10
tgfb	10
control_genes	10
probe_design	9
inter-laboratory	9
segmentation	9
msi	9
myc	9
sample_size	8
can_genes	8
chemotherapy	8
e2f1	8
boutique_arrays	8
consensus_clustering	8
time-course	8
editorial	8
chip-seq	8
personalized_medicine	8
er	7
nci60	7
18q_loh	7
lymphoma	7
plos_rules	7
mir21	7
plos_start	7
go	7
validation	7
tiling_array	7
graphs	6
motif	6
leukemia	6
non-coding	6
promoters	6
ontology	6
serum	6
community	6
hpc	6
stem	6
trial	6
correlation	6
read_mapping	6
gene_interaction	6
cin	5
plos_primer	5
gwas	5
prioritization	5
grid_computing	5
her2	5
prostate_cancer	5
survival	5
radiation	5
functional_genomics	5
machine_learning	5
cross-platform	5
gene_pairs	5
web_services	4
wnt	4
resource	4
public_data	4
lims	4
pr	4
data_curation	4
functional_classification	4
grading	4
image_analysis	4
mirna_cluster	4
mir34	4
pooling	4
biobank	4
open-source	4
mir192	4
stroma	3
primer	3
bim	3
confounders	3
tutorial	3
mass_spec	3
interaction	3
small_molecule	3
outlier	3
apc	3
low-level	3
svm	3
sop	3
epigenetics	3
er-positive	3
mage	3
filtering	3
sage	3
ngs	3
in-situ	3
roc	3
letter	3
pik3ca	3
evolution	3
luminal_subtype	3
8q24	3
micro_environment	3
hapmap	3
loops	3
cross-study	3
projection	3
agilent	3
stability	3
glioblastoma	3
triple_negative	3
ontologies	3
biomarkers	3
pca	3
web_server	3
chromatin	3
copa	3
dna_damage	2
semi-supervised	2
snp_arrays	2
ephb	2
differential_expression	2
caching	2
mir20a	2
stem_cells	2
target	2
compression	2
alignment	2
estradiol	2
serm	2
bcatenin	2
microarray_data	2
permutations	2
diagnostic	2
mir143	2
akt	2
smad	2
guidelines	2
thyroid	2
qtl	2
cloud_computing	2
cell_cycle	2
tbfs	2
recommendation	2
priors	2
mutual_information	2
batch-effect	2
sweave	2
web_resource	2
rin	2
upd	2
cetuximab	2
stageiii	2
protein_microarray	2
lymphocytes	2
dfs	2
20q	2
mir145	2
gene_fusion	2
protein_networks	2
mir215	2
flow_cytometry	2
chemo	2
meeting_report	2
translational	2
local_recurrence	2
fgfr2	2
ranked_lists	2
oncomine	2
cdk8	2
braf	1
wiki	1
aroma	1
rna-interference	1
invasion	1
dcc	1
plasma	1
gene_ranking	1
cross-species	1
dasl	1
python	1
lin28	1
cervical_cancer	1
shrna	1
disease	1
perturbation	1
fgf10	1
network_analysis	1
p21	1
in_situ_hybridization	1
bayesian	1
metastatis	1
xml	1
early-stage	1
tissue_origin	1
selection_bias	1
reproducibility	1
3utr	1
pilot_study	1
13q	1
dye_bias	1
driver_genes	1
metagene	1
meta_analysis	1
passenger_genes	1
prb	1
cancer_hallmarks	1
modules	1
erg	1
nomogram	1
graph_approach	1
peripheral_blood	1
power_analysis	1
ret	1
cables1	1
mixture_models	1
data_mining	1
rb	1
mir216a	1
translation	1
thyroid_cancer	1
assembly	1
smad7	1
pre-post	1
circulating_tumor_cells	1
neural_networks	1
fantom	1
signaling	1
mir-106b-25	1
breas_cancer	1
ndrg4	1
melanoma	1
ccnd1	1
gene_clusters	1
oncogene_addiction	1
454	1
gene_function_prediction	1
mirna221	1
pattern_discovery	1
mirna_discovery	1
taxane	1
stat3	1
mrna-seq	1
latent	1
mir16-1	1
eno1	1
formalization	1
met	1
ecm	1
bmp	1
brain_cancer	1
randomization	1
association_studies	1
mcm7	1
single_cell	1
grade_index	1
markup	1
concordance	1
gene_networks	1
mir101	1
genoty	1
news	1
cross_platform	1
mir15a	1
genome_assembly	1
resampling	1
tcga	1
er-negative	1
rnai	1
aurora_kinase	1
ucs	1
translocation	1
il8	1
mir217	1
mir155	1
gastric_cancer	1
simulation	1
bambi	1
latex	1
mir135	1
fish	1
mapk14	1
ensemble	1
dimension_reduction	1
asco	1
distance	1
mir203	1
mir196a-2	1
formats	1
transfection	1
pbc	1
ependymoma	1
study_design	1
clusterin	1
sampling	1
data_publication	1
hypoxia	1
microrna	1
oncogene	1
mirna222	1
mir31	1
mir199	1
genetics	1
mir449	1
target_discovery	1
myb	1
funding	1
aging	1
model-based	1
au-rich	1
est_analysis	1
apoptosis	1
mir126	1
module	1
biclustering	1
beads	1
pancreatic_cancer	1
mirna_pathway	1

jfr's Park [41 articles] Export Sort

jfr's tags