jfr's Zhang:Y [25 articles] Export

Recent papers posted to jfr's library by the author Zhang:Y. You can also see everyone's Zhang:Y.

	microRNA miR-196a-2 and Breast Cancer: A Genetic and Epigenetic Association Study and Functional Analysis [My Copy] Cancer Res, Vol. 69, No. 14. (15 July 2009), pp. 5970-5977. by Aaron E. Hoffman, Tongzhang Zheng, Chunhui Yi, et al.Derek Leaderer, Joanne Weidhaas, Frank Slack, Yawei Zhang, Trupti Paranjape, Yong Zhu posted to mirna mir196a-2 breast_cancer by jfr on 2009-12-21 14:09:58 as along with 3 people and 2 groups tonamswish songpku misonneh microRNA MGEL Reading
	Evaluation of cDNA Microarray Data by Multiple Clones Mapping to the Same Transcript. [My Copy] Omics : a journal of integrative biology (28 August 2009) by Dong Wang, Chenguang Wang, Lin Zhang, et al.Hui Xiao, Xiaopei Shen, Liping Ren, Wenyuan Zhao, Guini Hong, Yuannv Zhang, Jing Zhu, Min Zhang, Da Yang, Wencai Ma, Zheng Guo posted to two-color low-level by jfr on 2009-12-02 10:08:13 as
	Copy number alterations that predict metastatic capability of human breast cancer. [My Copy] Cancer research, Vol. 69, No. 9. (1 May 2009), pp. 3795-3801. by Yi Zhang, John W. Martens, Jack X. Yu, et al.John Jiang, Anieta M. Sieuwerts, Marcel Smid, Jan G. Klijn, Yixin Wang, John A. Foekens posted to integration copy-number classification breast_cancer by jfr on 2009-11-02 16:57:47 as along with 4 people giovenko frohike kdpreter rdiaz
	Role of miR-143 targeting KRAS in colorectal tumorigenesis. [My Copy] Oncogene (12 January 2009) by X Chen, X Guo, H Zhang, et al.Y Xiang, J Chen, Y Yin, X Cai, K Wang, G Wang, Y Ba, L Zhu, J Wang, R Yang, Y Zhang, Z Ren, K Zen, J Zhang, C-Y Y. Zhang posted to colon_cancer kras mir143 mirna by jfr on 2009-04-14 10:55:44 as along with 2 people and 1 group tonamswish valeriehilgers microRNA
	Poisson Approximation for Significance in Genome-wide ChIP-chip Tiling Arrays [My Copy] Bioinformatics (25 October 2008), btn549. by Yu Zhang posted to chip-chip by jfr on 2009-03-10 14:43:35 as along with 4 people and 2 groups Stew ghattem behindtherabbit djkt Bioinformatics - CRUK SIMR bioinformatics
	Distinct microRNA expression profiles in acute myeloid leukemia with common translocations. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 105, No. 40. (7 October 2008), pp. 15535-15540. by Z. Li, J. Lu, M. Sun, et al.S. Mi, H. Zhang, R. T. Luo, P. Chen, Y. Wang, M. Yan, Z. Qian, M. B. Neilly, J. Jin, Y. Zhang, S. K. Bohlander, D. E. Zhang, R. A. Larson, M. M. Le Beau, M. J. Thirman, T. R. Golub, J. D. Rowley, J. Chen posted to leukemia mirna translocation by jfr on 2009-01-10 16:42:36 as along with 2 people and 1 group jrifon felsani microRNA
	Molecular profiles of progesterone receptor loss in human breast tumors. [My Copy] Breast cancer research and treatment (19 April 2008) by Chad J. Creighton, C Kent Osborne, Marc J. van de Vijver, et al.John A. Foekens, Jan G. Klijn, Hugo M. Horlings, Dimitry Nuyten, Yixin Wang, Yi Zhang, Gary C. Chamness, Susan G. Hilsenbeck, Adrian V. Lee, Rachel Schiff posted to breast_cancer classification gene_expression by jfr on 2009-01-10 14:13:26 as along with 1 person Zephyrus
	Model-based Analysis of ChIP-Seq (MACS) [My Copy] Genome Biology, Vol. 9, No. 9. (2008), R137. by Yong Zhang, Tao Liu, Clifford Meyer, et al.Jerome Eeckhoute, David Johnson, Bradley Bernstein, Chad Nussbaum, Richard Myers, Myles Brown, Wei Li, X. Shirley Liu posted to chip-seq deep_sequencing software by jfr on 2009-01-10 11:01:19 as along with 25 people and 2 groups torfinnnome hzoltan Vincent_Rouilly darian stubrown mkiyer humburg cassj floatingpoint WanderingAengus bryankr rschulz mcm polivares gdb ghattem yadadi djkt stajich mdperry fpattyn bcondon idonaldson caseybrown kengg SIMR bioinformatics Mycology
	High-resolution characterization of the pancreatic adenocarcinoma genome [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 101, No. 24. (15 June 2004), pp. 9067-9072. by Andrew J. Aguirre, Cameron Brennan, Gerald Bailey, et al.Raktim Sinha, Bin Feng, Christopher Leo, Yunyu Zhang, Jean Zhang, Joseph D. Gans, Nabeel Bardeesy, Craig Cauwels, Carlos Cordon-Cardo, Mark S. Redston, Ronald A. Depinho, Lynda Chin posted to array-cgh gene_expression integration by jfr on 2009-01-08 13:22:28 as along with 4 people stharward rdiaz OscarRueda frohike
	Characterization of microRNAs in serum: a novel class of biomarkers for diagnosis of cancer and other diseases [My Copy] Cell Res, Vol. 18, No. 10. (October 0000), pp. 997-1006. by Xi Chen, Yi Ba, Lijia Ma, et al.Xing Cai, Yuan Yin, Kehui Wang, Jigang Guo, Yujing Zhang, Jiangning Chen, Xing Guo, Qibin Li, Xiaoying Li, Wenjing Wang, Yan Zhang, Jin Wang, Xueyuan Jiang, Yang Xiang, Chen Xu, Pingping Zheng, Juanbin Zhang, Ruiqiang Li, Hongjie Zhang, Xiaobin Shang, Ting Gong, Guang Ning, Jun Wang, Ke Zen, Junfeng Zhang, Chen-Yu Zhang posted to mirna serum by jfr on 2008-11-05 14:18:24 as along with 5 people and 1 group gdb Zephyrus abizar acrystal orzenil Roswell Cancer Crosstalk
	Young age at diagnosis correlates with worse prognosis and defines a subset of breast cancers with shared patterns of gene expression. [My Copy] Journal of clinical oncology : official journal of the American Society of Clinical Oncology, Vol. 26, No. 20. (10 July 2008), pp. 3324-3330. by C. K. Anders, D. S. Hsu, G. Broadwater, et al.C. R. Acharya, J. A. Foekens, Y. Zhang, Y. Wang, P. K. Marcom, J. R. Marks, P. G. Febbo, J. R. Nevins, A. Potti, K. L. Blackwell posted to breast_cancer meta-analysis by jfr on 2008-09-29 15:22:04 as along with 3 people and 2 groups songpku misonneh Zephyrus BCDC Lab Notebook Breast Cancer Reading Club
	MicroRNA Expression and Identification of Putative miRNA Targets in Ovarian Cancer [My Copy] PLoS ONE, Vol. 3, No. 6. (18 June 2008), e2436. by Neetu Dahiya, Cheryl A. Sherman-Baust, Tian-Li Wang, et al.Ben Davidson, Ie-Ming Shih, Yongqing Zhang, William Wood, Kevin G. Becker, Patrice J. Morin posted to mirna ovarian_cancer by jfr on 2008-09-16 19:08:16 as along with 2 people maralena ealloza
	Development of a clinically feasible molecular assay to predict recurrence of stage II colon cancer. [My Copy] The Journal of molecular diagnostics : JMD, Vol. 10, No. 4. (July 2008), pp. 346-354. by Y. Jiang, G. Casey, I. C. Lavery, et al.Y. Zhang, D. Talantov, M. Martin-McGreevy, M. Skacel, E. Manilich, A. Mazumder, D. Atkins, C. P. Delaney, Y. Wang posted to classification colon_cancer gene_expression stageii by jfr on 2008-09-16 18:59:15 as
	Pathway analysis of gene signatures predicting metastasis of node-negative primary breast cancer [My Copy] BMC Cancer, Vol. 7, No. 1. (25 September 2007), 182. by Jack Yu, Anieta Sieuwerts, Yi Zhang, et al.John Martens, Marcel Smid, Jan Klijn, Yixin Wang, John Foekens posted to breast_cancer gene_set_analysis pathway_analysis prognosis by jfr on 2008-09-04 10:39:43 as along with 6 people and 2 groups YaleHood111 suizan tonamswish ptrobajo Zephyrus ealloza 8_01 BioinfoCIPF
	Age-specific differences in oncogenic pathway deregulation seen in human breast tumors. [My Copy] PLoS ONE, Vol. 3, No. 1. (2008) by C. K. Anders, C. R. Acharya, D. S. Hsu, et al.G. Broadwater, K. Garman, J. A. Foekens, Y. Zhang, Y. Wang, K. Marcom, J. R. Marks, S. Mukherjee, J. R. Nevins, K. L. Blackwell, A. Potti posted to breast_cancer by jfr on 2008-08-05 17:04:16 as along with 4 people and 3 groups songpku balicea misonneh Zephyrus BCDC Lab Notebook Breast Cancer Reading Club Roswell Cancer Crosstalk
	Subtypes of Breast Cancer Show Preferential Site of Relapse [My Copy] Cancer Res, Vol. 68, No. 9. (1 May 2008), pp. 3108-3114. by Marcel Smid, Yixin Wang, Yi Zhang, et al.Anieta M. Sieuwerts, Jack Yu, Jan G. M. Klijn, John A. Foekens, John W. M. Martens posted to breast_cancer subtypes by jfr on 2008-08-05 16:51:22 as along with 2 people tonamswish Zephyrus
	Gene expression profiles and molecular markers to predict recurrence of Dukes' B colon cancer. [My Copy] J Clin Oncol, Vol. 22, No. 9. (1 May 2004), pp. 1564-1571. by Y. Wang, T. Jatkoe, Y. Zhang, et al.M. G. Mutch, D. Talantov, J. Jiang, H. L. McLeod, D. Atkins posted to classification colon_cancer gene_expression stageii by jfr on 2008-02-11 11:44:19 as
	Genes associated with breast cancer metastatic to bone. [My Copy] J Clin Oncol, Vol. 24, No. 15. (20 May 2006), pp. 2261-2267. by M. Smid, Y. Wang, J. G. Klijn, et al.A. M. Sieuwerts, Y. Zhang, D. Atkins, J. W. Martens, J. A. Foekens posted to breast_cancer metastasis by jfr on 2007-11-26 10:10:24 as
	Strong time dependence of the 76-gene prognostic signature for node-negative breast cancer patients in the TRANSBIG multicenter independent validation series. [My Copy] Clinical cancer research : an official journal of the American Association for Cancer Research, Vol. 13, No. 11. (1 June 2007), pp. 3207-3214. by C. Desmedt, F. Piette, S. Loi, et al.Y. Wang, F. Lallemand, B. Haibe-Kains, G. Viale, M. Delorenzi, Y. Zhang, M. S. d'Assignies, J. Bergh, R. Lidereau, P. Ellis, A. L. Harris, J. G. Klijn, J. A. Foekens, F. Cardoso, M. J. Piccart, M. Buyse, C. Sotiriou, posted to breast_cancer by jfr on 2007-11-23 15:23:08 as along with 3 people and 1 group vertikalist winterschlaefer frohike BTS-PT-AS-CS
	Lung metastasis genes couple breast tumor size and metastatic spread. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 104, No. 16. (17 April 2007), pp. 6740-6745. by Andy J. Minn, Gaorav P. Gupta, David Padua, et al.Paula Bos, Don X. Nguyen, Dimitry Nuyten, Bas Kreike, Yi Zhang, Yixin Wang, Hemant Ishwaran, John A. Foekens, Marc van de Vijver, Joan Massagué posted to breast_cancer metastasis by jfr on 2007-07-09 13:37:38 as along with 1 person tonamswish
	Prognostic gene expression signatures can be measured in tissues collected in RNAlater preservative. [My Copy] J Mol Diagn, Vol. 8, No. 1. (February 2006), pp. 31-39. by D. Chowdary, J. Lathrop, J. Skelton, et al.K. Curtin, T. Briggs, Y. Zhang, J. Yu, Y. Wang, A. Mazumder posted to microarray_technology by jfr on 2007-05-29 17:07:57 as
	Effects of HER2 overexpression on cell signaling networks governing proliferation and migration [My Copy] Mol Syst Biol, Vol. 2 (3 October 2006) by Alejandro Wolf-Yadlin, Neil Kumar, Yi Zhang, et al.Sampsa Hautaniemi, Muhammad Zaman, Hyung-Do Kim, Viara Grantcharova, Douglas A. Lauffenburger, Forest M. White posted to erbb by jfr on 2007-03-23 14:34:44 as along with 3 people and 1 group balabu cdppublications pjasper CDP
	Text mining of full-text journal articles combined with gene expression analysis reveals a relationship between sphingosine-1-phosphate and invasiveness of a glioblastoma cell line. [My Copy] BMC bioinformatics, Vol. 7, No. 1. (10 August 2006), 373. by Jeyakumar Natarajan, Daniel Berrar, Werner Dubitzky, et al.Catherine Hack, Yonghong Zhang, Catherine DeSesa, James R. Van Brocklyn, Eric G. Bremer posted to integration text-mining by jfr on 2007-01-10 14:07:12 as along with 6 people and 3 groups frohike cisevol fisherp yas helliontroy jacky957 BergmanLab T_lab biomedical-nlp
	Genome-wide in silico identification and analysis of cis natural antisense transcripts (cis-NATs) in ten species. [My Copy] Nucleic Acids Res, Vol. 34, No. 12. (2006), pp. 3465-3475. by Y. Zhang, X. S. Liu, Q. R. Liu, L. Wei posted to antisense genomics by jfr on 2006-11-08 12:01:52 as along with 1 person mtagaya
	Gene-expression profiles to predict distant metastasis of lymph-node-negative primary breast cancer. [My Copy] Lancet, Vol. 365, No. 9460. (5 2005), pp. 671-679. by Yixin Wang, Jan G. Klijn, Yi Zhang, et al.Anieta M. Sieuwerts, Maxime P. Look, Fei Yang, Dmitri Talantov, Mieke Timmermans, Marion E. Meijer-van Gelder, Jack Yu, Tim Jatkoe, Els M. Berns, David Atkins, John A. Foekens posted to breast_cancer classification by jfr on 2005-08-14 17:29:22 as along with 12 people and 2 groups tonamswish yaredo lwaldron provero windman83 laral tuck giovanni frohike cberry giovenko winterschlaefer Bioinformatics GeschwindLab

Note: You may cite this page as: http://www.citeulike.org/user/jfr/author/Zhang:Y

breast_cancer	483
mirna	356
review	347
software	279
classification	275
colon_cancer	236
gene_expression	179
methodology	169
copy-number	162
network	148
integration	139
microarray_technology	133
clustering	125
bioinformatics	122
feature_selection	107
meta-analysis	97
affy	86
database	84
therapy	80
mirna_target	79
gene_set_analysis	71
crc_bib	69
array-cgh	69
regulation	67
low_level	66
rt-pcr	64
systems_biology	63
pathway_analysis	61
genomics	60
subtypes	58
annotation	57
snp-arrays	57
comment	54
quality_control	51
metastasis	48
normalization	46
mutations	43
deep_sequencing	42
prognosis	42
ffpe	41
microarray_analysis	41
estrogen	40
proteomics	39
cancer	38
bioconductor	37
statistics	37
progression	36
alternative_splicing	35
protein_interaction	35
fdr	35
markers	35
snp	34
r	33
methylation	32
standards	30
class_discovery	28
mutation	28
tamoxifen	28
exon_arrays	25
mir17-92	25
jfrbib	24
two-color	24
experiment_design	23
ovarian_cancer	23
microarray_protocol	23
pathway	22
comparison	21
co-expression	21
brca	21
tfbs	20
model	20
kras	20
survival_analysis	20
treatment	19
functional_analysis	19
p53	19
platform_comparison	18
multiple_testing	18
technology	17
illumina	17
module_detection	16
biomarker	16
stem_cell	16
jfrbib04-09	16
evaluation	16
chip-chip	16
text-mining	15
nmf	15
antisense	15
reproducible_research	15
sequencing	14
erbb	14
bio_signature	14
basal_subtype	14
stageii	13
maqc	13
tma	13
staging	13
cell_line	13
rna_quality	13
lung_cancer	13
egfr	13
gene_lists	12
marker	12
gene_ontology	12
cnv	12
genotyping	12
proliferation	11
loh	11
genome_browser	11
drug_discovery	11
semantic_web	11
pten	11
protocol	11
missing_values	11
visualization	10
mirna_regulation	10
tissue_specificity	10
disease_genes	10
immunohistochemistry	10
tgfb	10
control_genes	10
probe_design	9
inter-laboratory	9
segmentation	9
msi	9
myc	9
sample_size	8
can_genes	8
chemotherapy	8
e2f1	8
boutique_arrays	8
consensus_clustering	8
time-course	8
editorial	8
chip-seq	8
personalized_medicine	8
er	7
nci60	7
18q_loh	7
lymphoma	7
plos_rules	7
mir21	7
plos_start	7
go	7
validation	7
tiling_array	7
graphs	6
motif	6
leukemia	6
non-coding	6
promoters	6
ontology	6
serum	6
community	6
hpc	6
stem	6
trial	6
correlation	6
read_mapping	6
gene_interaction	6
cin	5
plos_primer	5
gwas	5
prioritization	5
grid_computing	5
her2	5
prostate_cancer	5
survival	5
radiation	5
functional_genomics	5
machine_learning	5
cross-platform	5
gene_pairs	5
web_services	4
wnt	4
resource	4
public_data	4
lims	4
pr	4
data_curation	4
functional_classification	4
grading	4
image_analysis	4
mirna_cluster	4
mir34	4
pooling	4
biobank	4
open-source	4
mir192	4
stroma	3
primer	3
bim	3
confounders	3
tutorial	3
mass_spec	3
interaction	3
small_molecule	3
outlier	3
apc	3
low-level	3
svm	3
sop	3
epigenetics	3
er-positive	3
mage	3
filtering	3
sage	3
ngs	3
in-situ	3
roc	3
letter	3
pik3ca	3
evolution	3
luminal_subtype	3
8q24	3
micro_environment	3
hapmap	3
loops	3
cross-study	3
projection	3
agilent	3
stability	3
glioblastoma	3
triple_negative	3
ontologies	3
biomarkers	3
pca	3
web_server	3
chromatin	3
copa	3
dna_damage	2
semi-supervised	2
snp_arrays	2
ephb	2
differential_expression	2
caching	2
mir20a	2
stem_cells	2
target	2
compression	2
alignment	2
estradiol	2
serm	2
bcatenin	2
microarray_data	2
permutations	2
diagnostic	2
mir143	2
akt	2
smad	2
guidelines	2
thyroid	2
qtl	2
cloud_computing	2
cell_cycle	2
tbfs	2
recommendation	2
priors	2
mutual_information	2
batch-effect	2
sweave	2
web_resource	2
rin	2
upd	2
cetuximab	2
stageiii	2
protein_microarray	2
lymphocytes	2
dfs	2
20q	2
mir145	2
gene_fusion	2
protein_networks	2
mir215	2
flow_cytometry	2
chemo	2
meeting_report	2
translational	2
local_recurrence	2
fgfr2	2
ranked_lists	2
oncomine	2
cdk8	2
braf	1
wiki	1
aroma	1
rna-interference	1
invasion	1
dcc	1
plasma	1
gene_ranking	1
cross-species	1
dasl	1
python	1
lin28	1
cervical_cancer	1
shrna	1
disease	1
perturbation	1
fgf10	1
network_analysis	1
p21	1
in_situ_hybridization	1
bayesian	1
metastatis	1
xml	1
early-stage	1
tissue_origin	1
selection_bias	1
reproducibility	1
3utr	1
pilot_study	1
13q	1
dye_bias	1
driver_genes	1
metagene	1
meta_analysis	1
passenger_genes	1
prb	1
cancer_hallmarks	1
modules	1
erg	1
nomogram	1
graph_approach	1
peripheral_blood	1
power_analysis	1
ret	1
cables1	1
mixture_models	1
data_mining	1
rb	1
mir216a	1
translation	1
thyroid_cancer	1
assembly	1
smad7	1
pre-post	1
circulating_tumor_cells	1
neural_networks	1
fantom	1
signaling	1
mir-106b-25	1
breas_cancer	1
ndrg4	1
melanoma	1
ccnd1	1
gene_clusters	1
oncogene_addiction	1
454	1
gene_function_prediction	1
mirna221	1
pattern_discovery	1
mirna_discovery	1
taxane	1
stat3	1
mrna-seq	1
latent	1
mir16-1	1
eno1	1
formalization	1
met	1
ecm	1
bmp	1
brain_cancer	1
randomization	1
association_studies	1
mcm7	1
single_cell	1
grade_index	1
markup	1
concordance	1
gene_networks	1
mir101	1
genoty	1
news	1
cross_platform	1
mir15a	1
genome_assembly	1
resampling	1
tcga	1
er-negative	1
rnai	1
aurora_kinase	1
ucs	1
translocation	1
il8	1
mir217	1
mir155	1
gastric_cancer	1
simulation	1
bambi	1
latex	1
mir135	1
fish	1
mapk14	1
ensemble	1
dimension_reduction	1
asco	1
distance	1
mir203	1
mir196a-2	1
formats	1
transfection	1
pbc	1
ependymoma	1
study_design	1
clusterin	1
sampling	1
data_publication	1
hypoxia	1
microrna	1
oncogene	1
mirna222	1
mir31	1
mir199	1
genetics	1
mir449	1
target_discovery	1
myb	1
funding	1
aging	1
model-based	1
au-rich	1
est_analysis	1
apoptosis	1
mir126	1
module	1
biclustering	1
beads	1
pancreatic_cancer	1
mirna_pathway	1

jfr's Zhang:Y [25 articles] Export

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