jfr's bioinformatics [121 articles] Export

Recent papers added to jfr's library classified by the tag bioinformatics. You can also see everyone's bioinformatics.

	The Genome Reverse Compiler: an explorative annotation tool [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 35. by Andrew Warren, Joao Setubal posted to annotation bioinformatics genome_browser genomics software by jfr on 2009-07-03 16:52:46 as along with 8 people and 2 groups guhjy nuin natstreet Zephyrus idoerg cisevol druvus behindtherabbit Roswell Cancer Crosstalk BergmanLab
	Bioinformatics: alive and kicking [My Copy] Genome Biology, Vol. 9 (17 December 2008), 114. by Lincoln D. Stein posted to bioinformatics comment by jfr on 2009-03-16 10:23:24 as along with 16 people and 1 group ilyashl imaginatio VGreiff renatomilani Zephyrus idoerg Yanno dandaman klo reyez dullhunk allysonlister fgibson neils kshameer druvus Roswell Cancer Crosstalk
	Dissecting the molecular mechanisms of cancer through bioinformatics-based experimental approaches. [My Copy] Journal of cellular biochemistry, Vol. 101, No. 5. (1 August 2007), pp. 1074-1086. by A. G. Rivenbark, W. B. Coleman posted to bioinformatics microarray_technology review by jfr on 2008-11-26 17:45:49 as
	Keeping pace with the data: 2008 update on the Bioinformatics Links Directory. [My Copy] Nucleic acids research, Vol. 36, No. Web Server issue. (1 July 2008) by M. D. Brazas, J. A. Fox, T. Brown, S. McMillan, B. F. Ouellette posted to bioinformatics database by jfr on 2008-09-24 14:25:51 as along with 4 people dansullivanblk nuin guhjy inesdesantiago
	BLOSUM62 miscalculations improve search performance [My Copy] Nature Biotechnology, Vol. 26, No. 3., pp. 274-275. by Mark P. Styczynski, Kyle L. Jensen, Isidore Rigoutsos, Gregory Stephanopoulos posted to bioinformatics by jfr on 2008-09-03 14:45:28 as along with 5 people dullhunk zwang ptrobajo bpcusack chad_davis
	Divisive Correlation Clustering Algorithm (DCCA) for grouping of genes: detecting varying patterns in expression profiles [My Copy] Bioinformatics, Vol. 24, No. 11. (1 June 2008), pp. 1359-1366. by Anindya Bhattacharya, Rajat K. De posted to bioinformatics clustering by jfr on 2008-08-04 18:13:17 as along with 3 people roys guhjy barriot
	Alignment Uncertainty and Genomic Analysis [My Copy] Science, Vol. 319, No. 5862. (25 January 2008), pp. 473-476. by Karen M. Wong, Marc A. Suchard, John P. Huelsenbeck posted to alignment bioinformatics genomics by jfr on 2008-08-04 14:57:05 as along with 32 people and 2 groups operon walshtp darian ptrobajo friendpine skembel druvus treangen bpb aprasad dayjm pradiptaray dpollard tny djkt cjeans zwang lisa1 cactus biomcgary lilou dandaman gjuggler renatomilani mclarenv youdon bpcusack guhjy jdelcampo adacier gracio timflutre EisenLab microbiology_nijmegen
	Beyond standardization: dynamic software infrastructures for systems biology [My Copy] Nature Reviews Genetics, Vol. 8, No. 3. (13 February 2007), pp. 235-243. by Morris A. Swertz, Ritsert C. Jansen posted to bioinformatics software by jfr on 2008-07-31 11:46:46 as along with 6 people and 1 group dansullivanblk druvus moborg dullhunk mhucka peterli Bioinformatics
	A segmental maximum a posteriori approach to genome-wide copy number profiling. [My Copy] Bioinformatics (Oxford, England), Vol. 24, No. 6. (15 March 2008), pp. 751-758. by R. Andersson, C. E. Bruder, A. Piotrowski, et al.U. Menzel, H. Nord, J. Sandgren, T. R. Hvidsten, T. Diaz de Ståhl, J. P. Dumanski, J. Komorowski posted to array-cgh bioconductor bioinformatics segmentation by jfr on 2008-07-10 17:15:08 as along with 1 person rdiaz
	Identification of cancer genes using a statistical framework for multiexperiment analysis of nondiscretized array CGH data. [My Copy] Nucleic acids research, Vol. 36, No. 2. (February 2008) by C. Klijn, H. Holstege, J. de Ridder, et al.X. Liu, M. Reinders, J. Jonkers, L. Wessels posted to array-cgh bioinformatics breast_cancer crc_bib by jfr on 2008-07-10 17:03:13 as along with 3 people frohike rdiaz Zephyrus
	Many Microbe Microarrays Database: uniformly normalized Affymetrix compendia with structured experimental metadata [My Copy] Nucl. Acids Res. (11 October 2007), gkm815. by Jeremiah J. Faith, Michael E. Driscoll, Vincent A. Fusaro, et al.Elissa J. Cosgrove, Boris Hayete, Frank S. Juhn, Stephen J. Schneider, Timothy S. Gardner posted to affy bioinformatics database gene_expression by jfr on 2008-06-13 14:42:32 as along with 2 people bertelsen tvdbulck
	Resources, standards and tools for systems biology [My Copy] Brief Funct Genomic Proteomic (17 October 2007), elm027. by Christoph Wierling, Ralf Herwig, Hans Lehrach posted to bioinformatics review standards systems_biology by jfr on 2008-05-21 13:21:33 as along with 3 people and 1 group dagmar irenas guhjy compneur
	Lightweight Genome Viewer: portable software for browsing genomics data in its chromosomal context [My Copy] BMC Bioinformatics, Vol. 8 (18 September 2007), 344. by Jeremiah J. Faith, Andrew J. Olson, Timothy S. Gardner, Ravi Sachidanandam posted to annotation bioinformatics genome_browser software by jfr on 2008-05-16 10:09:05 as along with 1 person guhjy
	Bioinformatics challenges of new sequencing technology [My Copy] Trends in Genetics, Vol. 24, No. 3. (11 February 2008), pp. 142-149. by M. Pop, S. Salzberg posted to bioinformatics deep_sequencing review by jfr on 2008-04-30 17:58:27 as along with 33 people hpaces heliopais imaginatio operon daforerog n00c ptrobajo orzenil APRegier katholt michaelbarton kiekyon thegoose2 xingxu floatingpoint polivares yupu treangen jmcq delenickphd giovenko jmeppley dchughes djkt GustavoLacerda niallhaslam urgi Neeperando tharris mariakmejia caseybrown yoonk druvus
	The XBabelPhish MAGE-ML and XML Translator [My Copy] BMC Bioinformatics, Vol. 9 (18 January 2008), 28. by Don Maier, Farrell Wymore, Gavin Sherlock, Catherine A. Ball posted to bioinformatics formats software standards by jfr on 2008-04-28 14:50:14 as
	Data Mining in Genomics [My Copy] Clinics in Laboratory Medicine In Clinical Data Mining and Warehousing, Vol. 28, No. 1. (March 2008), pp. 145-166. by Jae K. Lee, Paul D. Williams, Sooyoung Cheon posted to bioinformatics genomics methodology review by jfr on 2008-04-18 13:11:29 as along with 3 people daforerog guhjy imrchen
	Data mining for biomarker development: a review of tissue specificity analysis. [My Copy] Clin Lab Med, Vol. 28, No. 1. (March 2008), pp. 127-143. by E. W. Klee posted to bioinformatics marker review tissue_specificity by jfr on 2008-04-18 13:05:37 as along with 1 person guhjy
	Bioinformatics approaches in the study of cancer. [My Copy] Curr Mol Med, Vol. 7, No. 1. (February 2007), pp. 133-141. by D. A. Hanauer, D. R. Rhodes, C. Sinha-Kumar, A. M. Chinnaiyan posted to bioinformatics review by jfr on 2008-04-16 17:46:29 as along with 1 person guhjy
	Prediction of both conserved and nonconserved microRNA targets in animals [My Copy] Bioinformatics (29 November 2007), btm595. by Xiaowei Wang, El posted to bioinformatics mirna mirna_target by jfr on 2008-04-09 14:23:45 as along with 7 people and 1 group alessandroparini giovenko guhjy bootsy lp2 heliopais Alexander_Kanitz microRNA
	RReportGenerator: automatic reports from routine statistical analysis using R. [My Copy] Bioinformatics (Oxford, England), Vol. 24, No. 2. (15 January 2008), pp. 276-278. by Wolfgang Raffelsberger, Yannick Krause, Luc Moulinier, et al.David Kieffer, Anne-Laure L. Morand, Laurent Brino, Olivier Poch posted to bioinformatics r reproducible_research software by jfr on 2008-04-09 14:20:53 as along with 9 people daforerog bertelsen natstreet druvus guhjy waszak mailund maralena GeeSharpMinor
	Pancreatic Expression database: a generic model for the organization, integration and mining of complex cancer datasets [My Copy] BMC Genomics, Vol. 8 (28 November 2007), 439. by Claude Chelala, Stephan A. Hahn, Hannah J. Whiteman, et al.Sayka Barry, Deepak Hariharan, Tomasz P. Radon, Nicholas R. Lemoine, Tatjana Crnogorac-Jurcevic posted to bioinformatics database gene_expression integration by jfr on 2008-04-09 13:40:06 as along with 1 person and 1 group shikin GeneGo
	SGDI: system for genomic data integration. [My Copy] Pac Symp Biocomput (2008), pp. 141-152. by V. J. Carey, J. Gentry, R. Sarkar, D. Gentleman, S. Ramaswamy posted to bioinformatics database integration meta-analysis by jfr on 2008-04-09 12:51:42 as along with 2 people imina guhjy
	CARAT: a novel method for allelic detection of DNA copy number changes using high density oligonucleotide arrays. [My Copy] BMC Bioinformatics, Vol. 7 (2006) by J. Huang, W. Wei, J. Chen, et al.J. Zhang, G. Liu, X. Di, R. Mei, S. Ishikawa, H. Aburatani, K. W. Jones, M. H. Shapero posted to bioinformatics software snp-arrays by jfr on 2008-02-13 10:43:01 as along with 2 people and 1 group rdiaz bioguru2000 Bioinformatics
	SNPTools: a software tool for visualization and analysis of microarray data. [My Copy] Bioinformatics (Oxford, England), Vol. 23, No. 12. (15 June 2007), pp. 1550-1552. by Frank J. Sørensen, Claus L. Andersen, Carsten Wiuf posted to bioinformatics software snp-arrays by jfr on 2008-02-13 10:39:45 as along with 2 people daforerog guhjy
	Analysis and visualization of chromosomal abnormalities in SNP data with SNPscan. [My Copy] BMC Bioinformatics, Vol. 7, No. 1. (18 January 2006) by Jason C. Ting, Ying Ye, George H. Thomas, Ingo Ruczinski, Jonathan Pevsner posted to bioinformatics software snp-arrays by jfr on 2008-02-13 10:36:04 as
	SNPchip: R classes and methods for SNP array data. [My Copy] Bioinformatics (Oxford, England), Vol. 23, No. 5. (1 March 2007), pp. 627-628. by Robert B. Scharpf, Jason C. Ting, Jonathan Pevsner, Ingo Ruczinski posted to bioconductor bioinformatics software snp-arrays by jfr on 2008-02-13 09:36:23 as along with 6 people shikin daforerog guhjy Ayest eckart_bindewald cpnP
	GEDI: a user-friendly toolbox for analysis of large-scale gene expression data [My Copy] BMC Bioinformatics, Vol. 8 (19 November 2007), 457. by Andre Fujita, Joao R. Sato, Carlos E. Ferreira, Mari C. Sogayar posted to bioinformatics software by jfr on 2008-02-06 13:16:47 as along with 1 person guhjy
	The Firegoose: two-way integration of diverse data from different bioinformatics web resources with desktop applications. [My Copy] BMC bioinformatics, Vol. 8 (19 November 2007), 456. by J. Christopher Bare, Paul T. Shannon, Amy K. Schmid, Nitin S. Baliga posted to bioinformatics software by jfr on 2008-02-06 13:14:33 as along with 14 people and 1 group thomaskelder cwperth Thaverkamp druvus kshameer lptolik guhjy dullhunk neils ryanraaum mircea srp33 selatham megraw NCCT Lab Reading Group
	pcaMethods a bioconductor package providing PCA methods for incomplete data [My Copy] Bioinformatics, Vol. 23, No. 9. (1 May 2007), pp. 1164-1167. by Wolfram Stacklies, Henning Redestig, Matthias Scholz, Dirk Walther, Joachim Selbig posted to bioconductor bioinformatics by jfr on 2007-09-05 11:49:47 as along with 3 people and 1 group natstreet shigepong guhjy Bioinformatics
	Codelink: an R package for analysis of GE healthcare gene expression bioarrays. [My Copy] Bioinformatics, Vol. 23, No. 9. (1 May 2007), pp. 1168-1169. by D. Diez, R. Alvarez, A. Dopazo posted to bioconductor bioinformatics by jfr on 2007-09-05 11:49:02 as
	SPCalc: A web-based calculator for sample size and power calculations in micro-array studies. [My Copy] Bioinformation, Vol. 1, No. 7. (2006), pp. 251-252. by W. Qiu, M. L. Lee posted to bioinformatics experiment_design sample_size by jfr on 2007-08-02 16:39:50 as along with 1 person guhjy
	DAVID Bioinformatics Resources: expanded annotation database and novel algorithms to better extract biology from large gene lists [My Copy] Nucl. Acids Res., Vol. 35, No. Web Server issue. (18 June 2007), gkm415. by Da W. Huang, Brad T. Sherman, Qina Tan, et al.Joseph Kir, David Liu, David Bryant, Yongjian Guo, Robert Stephens, Michael W. Baseler, H. Clifford Lane, Richard A. Lempicki posted to annotation bioinformatics by jfr on 2007-08-02 14:11:35 as along with 3 people VGreiff bertelsen guhjy
	BIPASS: BioInformatics Pipeline Alternative Splicing Services. [My Copy] Nucleic Acids Res, Vol. 35, No. Web Server issue. (1 July 2007) by Z. Lacroix, C. Legendre, L. Raschid, B. Snyder posted to alternative_splicing bioinformatics by jfr on 2007-08-02 14:08:48 as along with 1 person guhjy
	Enabling high-throughput data management for systems biology: the Bioinformatics Resource Manager. [My Copy] Bioinformatics, Vol. 23, No. 7. (1 April 2007), pp. 906-909. by A. R. Shah, M. Singhal, K. R. Klicker, E. G. Stephan, H. S. Wiley, K. M. Waters posted to bioinformatics by jfr on 2007-07-31 17:32:31 as along with 3 people and 2 groups guhjy julius jmuhlich SysbioMPI-TCells SorgerLab
	Reactome: a knowledge base of biologic pathways and processes [My Copy] Genome Biology, Vol. 8, No. 3. (16 March 2007), R39. by Imre Vastrik, Peter D'Eustachio, Esther Schmidt, et al.Geeta J. Tope, Gopal Gopinath, David Croft, Bernard de Bono, Marc Gillespie, Bijay Jassal, Suzanna Lewis, Lisa Matthews, Guanming Wu, Ewan Birney, Lincoln Stein posted to bioinformatics pathway_analysis by jfr on 2007-07-31 16:29:35 as along with 14 people neilswainston peterli bertelsen aramesh2 dolchan shikin fgibson reyez guhjy dragonrez balajis raiyar toshiaki_katayama AlexanderPico
	Matching receptome genes with their ligands for surveying paracrine/autocrine signaling systems. [My Copy] Mol Endocrinol, Vol. 21, No. 8. (August 2007), pp. 2009-2014. by I. Ben-Shlomo, R. Rauch, O. Avsian-Kretchmer, A. J. Hsueh posted to bioinformatics loops by jfr on 2007-07-31 10:29:05 as
	caCORE version 3: Implementation of a model driven, service-oriented architecture for semantic interoperability. [My Copy] J Biomed Inform (2 April 2007) by George A A. Komatsoulis, Denise B B. Warzel, Francis W W. Hartel, et al.Krishnakant Shanbhag, Ram Chilukuri, Gilberto Fragoso, Sherri de D. Coronado, Dianne M M. Reeves, Jillaine B B. Hadfield, Christophe Ludet, Peter A A. Covitz posted to bioinformatics by jfr on 2007-07-30 16:49:27 as along with 3 people beanformer druvus guhjy
	Tilescope: online analysis pipeline for high-density tiling microarray data [My Copy] Genome Biology, Vol. 8 (14 May 2007), R81. by Zhengdong D. Zhang, Joel Rozowsky, Hugo Y. K. Lam, Jiang Du, Michael Snyder, Mark Gerstein posted to bioinformatics tiling_array by jfr on 2007-07-23 19:17:43 as along with 3 people caseybrown inesdesantiago GeeSharpMinor
	Handlebar: a flexible, web-based inventory manager for handling barcoded samples. [My Copy] Biotechniques, Vol. 42, No. 3. (March 2007) by T. Booth, J. Gilbert, J. D. Neufeld, et al.J. Ball, M. Thurston, K. Chipman, I. Joint, D. Field posted to bioinformatics lims by jfr on 2007-07-23 19:05:49 as
	WilcoxCV: an R package for fast variable selection in cross-validation. [My Copy] Bioinformatics (11 May 2007) by Anne-Laure L. Boulesteix posted to bioconductor bioinformatics feature_selection by jfr on 2007-07-20 17:07:10 as along with 1 person guhjy
	GEOquery: a bridge between the Gene Expression Omnibus (GEO) and BioConductor. [My Copy] Bioinformatics (12 May 2007) by Sean Davis, Paul S S. Meltzer posted to bioconductor bioinformatics by jfr on 2007-07-20 16:15:48 as along with 10 people and 1 group brianb dswan neils shikin guhjy ugengma giovenko ablejec zhouyu bertelsen Bioinformatics
	GGtools: analysis of genetics of gene expression in bioconductor. [My Copy] Bioinformatics, Vol. 23, No. 4. (15 February 2007), pp. 522-523. by V. J. Carey, M. Morgan, S. Falcon, R. Lazarus, R. Gentleman posted to bioconductor bioinformatics snp software by jfr on 2007-07-20 11:24:12 as along with 3 people guhjy waszak sanchezbuelna
	CARGO: a web portal to integrate customized biological information. [My Copy] Nucleic Acids Res, Vol. 35, No. Web Server issue. (1 July 2007) by I. Cases, D. G. Pisano, E. Andres, et al.A. Carro, J. M. Fernández, G. Gómez-López, J. M. Rodriguez, J. F. Vera, A. Valencia, A. M. Rojas posted to bioinformatics cancer functional_analysis by jfr on 2007-07-19 17:47:38 as along with 3 people guhjy skhadar moborg
	Resources for integrative systems biology: from data through databases to networks and dynamic system models. [My Copy] Briefings in bioinformatics, Vol. 7, No. 4. (December 2006), pp. 318-330. by Aylwin Ng, Borisas Bursteinas, Qiong Gao, Ewan Mollison, Marketa Zvelebil posted to bioinformatics integration model review systems_biology by jfr on 2007-07-19 16:06:16 as along with 5 people flbarroso irenas balajis cjeans daed
	g:Profiler--a web-based toolset for functional profiling of gene lists from large-scale experiments. [My Copy] Nucleic acids research, Vol. 35, No. Web Server issue. (1 July 2007) by Jüri Reimand, Meelis Kull, Hedi Peterson, Jaanus Hansen, Jaak Vilo posted to bioinformatics gene_set_analysis by jfr on 2007-07-19 14:49:46 as along with 4 people and 1 group daforerog guhjy ealloza lp2 BioinfoCIPF
	GENECODIS: a web-based tool for finding significant concurrent annotations in gene lists. [My Copy] Genome biology, Vol. 8, No. 1. (04 January 2007), R3. by Pedro Carmona-Saez, Monica Chagoyen, Francisco Tirado, Jose M. Carazo, Alberto Pascual-Montano posted to annotation bioinformatics by jfr on 2007-07-10 17:30:09 as along with 4 people and 1 group ptrobajo aalibes ealloza yas BioinfoCIPF
	The genopolis microarray database. [My Copy] BMC Bioinformatics, Vol. 8 Suppl 1 (2007) by A. Splendiani, M. Brandizi, G. Even, et al.O. Beretta, N. Pavelka, M. Pelizzola, M. Mayhaus, M. Foti, G. Mauri, P. Ricciardi-Castagnoli posted to bioinformatics database by jfr on 2007-07-10 17:14:16 as along with 2 people VGreiff guhjy
	A Grid-based solution for management and analysis of microarrays in distributed experiments [My Copy] BMC Bioinformatics, Vol. 8, No. Suppl 1. (2007) by Ivan Porro, Livia Torterolo, Luca Corradi, et al.Marco Fato, Adam Papadimitropoulos, Silvia Scaglione, Andrea Schenone, Federica Viti posted to bioinformatics grid_computing by jfr on 2007-07-10 17:12:47 as along with 3 people guhjy SteveTheRed GeeSharpMinor
	Bayesian methods in bioinformatics and computational systems biology [My Copy] Brief Bioinform, Vol. 8, No. 2. (12 April 2007), pp. bbm007-116. by Darren J. Wilkinson posted to bioinformatics review statistics by jfr on 2007-07-10 17:05:23 as along with 22 people and 1 group daforerog shikin jb44 gamberina tonamswish red446 svozil VGreiff guhjy Borelli wnpx neveaire zwang bertelsen cabbagezs julesyoo blobbybirdman hpaces vietanh0 waszak i-stevenson quianominorleo Bioinformatics
	Assessing the need for sequence-based normalization in tiling microarray experiments. [My Copy] Bioinformatics (25 March 2007) by Thomas E E. Royce, Joel S S. Rozowsky, Mark B B. Gerstein posted to bioinformatics normalization tiling_array by jfr on 2007-07-09 13:53:31 as along with 4 people and 1 group mmarchin nicholso bertelsen GeeSharpMinor Bioinformatics

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breast_cancer	455
review	328
mirna	322
classification	261
software	254
colon_cancer	224
methodology	168
gene_expression	157
copy-number	150
network	145
microarray_technology	131
integration	130
bioinformatics	121
clustering	116
feature_selection	104
meta-analysis	89
affy	82
database	79
therapy	78
mirna_target	71
crc_bib	69
array-cgh	68
gene_set_analysis	65
low_level	65
regulation	63
systems_biology	61
pathway_analysis	59
genomics	58
snp-arrays	56
annotation	53
subtypes	53
rt-pcr	52
comment	49
quality_control	47
mutations	43
normalization	41
prognosis	41
estrogen	40
metastasis	40
ffpe	39
cancer	37
microarray_analysis	37
alternative_splicing	35
progression	35
protein_interaction	35
statistics	35
markers	34
proteomics	34
bioconductor	33
deep_sequencing	33
fdr	33
methylation	32
snp	31
class_discovery	28
tamoxifen	28
mutation	27
exon_arrays	25
r	25
standards	25
jfrbib	24
microarray_protocol	23
two-color	23
experiment_design	22
mir17-92	22
brca	21
ovarian_cancer	21
co-expression	20
comparison	20
model	20
pathway	20
tfbs	20
survival_analysis	19
functional_analysis	18
p53	18
treatment	18
kras	17
platform_comparison	17
evaluation	16
illumina	16
jfrbib04-09	16
stem_cell	16
antisense	15
biomarker	15
chip-chip	15
module_detection	15
multiple_testing	15
nmf	15
erbb	14
sequencing	14
text-mining	14
basal_subtype	13
bio_signature	13
reproducible_research	13
stageii	13
staging	13
technology	13
tma	13
cnv	12
genotyping	12
lung_cancer	12
marker	12
drug_discovery	11
egfr	11
gene_ontology	11
maqc	11
missing_values	11
protocol	11
rna_quality	11
cell_line	10
gene_lists	10
genome_browser	10
loh	10
tissue_specificity	10
disease_genes	9
msi	9
probe_design	9
pten	9
segmentation	9
semantic_web	9
boutique_arrays	8
can_genes	8
control_genes	8
e2f1	8
mirna_regulation	8
personalized_medicine	8
proliferation	8
sample_size	8
tgfb	8
visualization	8
18q_loh	7
consensus_clustering	7
immunohistochemistry	7
inter-laboratory	7
lymphoma	7
myc	7
tiling_array	7
chip-seq	6
community	6
editorial	6
gene_interaction	6
graphs	6
hpc	6
leukemia	6
motif	6
non-coding	6
plos_rules	6
promoters	6
serum	6
stem	6
time-course	6
validation	6
correlation	5
gene_pairs	5
grid_computing	5
gwas	5
machine_learning	5
mir21	5
nci60	5
ontology	5
plos_primer	5
biobank	4
cin	4
cross-platform	4
data_curation	4
go	4
grading	4
image_analysis	4
lims	4
mir34	4
mirna_cluster	4
plos_start	4
pooling	4
prioritization	4
prostate_cancer	4
radiation	4
resource	4
trial	4
agilent	3
apc	3
bim	3
biomarkers	3
chemotherapy	3
chromatin	3
confounders	3
copa	3
evolution	3
functional_classification	3
hapmap	3
interaction	3
loops	3
mass_spec	3
micro_environment	3
mir192	3
open-source	3
outlier	3
pca	3
pik3ca	3
primer	3
public_data	3
roc	3
sage	3
small_molecule	3
sop	3
stability	3
stroma	3
survival	3
triple_negative	3
tutorial	3
web_services	3
wnt	3
20q	2
8q24	2
alignment	2
batch-effect	2
bcatenin	2
caching	2
cdk8	2
chemo	2
diagnostic	2
dna_damage	2
ephb	2
epigenetics	2
er-positive	2
filtering	2
gene_fusion	2
glioblastoma	2
guidelines	2
in-situ	2
letter	2
local_recurrence	2
lymphocytes	2
mage	2
meeting_report	2
mir20a	2
mir215	2
mutual_information	2
oncomine	2
ontologies	2
priors	2
projection	2
protein_microarray	2
protein_networks	2
qtl	2
recommendation	2
semi-supervised	2
serm	2
smad	2
snp_arrays	2
svm	2
sweave	2
target	2
tbfs	2
thyroid	2
translational	2
upd	2
3utr	1
aging	1
akt	1
aroma	1
asco	1
association_studies	1
au-rich	1
aurora_kinase	1
bayesian	1
beads	1
biclustering	1
bmp	1
braf	1
brain_cancer	1
cables1	1
cell_cycle	1
cervical_cancer	1
circulating_tumor_cells	1
clusterin	1
compression	1
cross-study	1
dasl	1
dcc	1
dimension_reduction	1
disease	1
distance	1
driver_genes	1
dye_bias	1
ecm	1
eno1	1
ensemble	1
ependymoma	1
er	1
erg	1
er-negative	1
est_analysis	1
estradiol	1
fgfr2	1
flow_cytometry	1
formalization	1
formats	1
funding	1
gastric_cancer	1
gene_clusters	1
gene_function_prediction	1
genetics	1
genoty	1
her2	1
hypoxia	1
il8	1
in_situ_hybridization	1
invasion	1
latent	1
luminal_subtype	1
mcm7	1
melanoma	1
met	1
meta_analysis	1
metagene	1
microrna	1
mir101	1
mir-106b-25	1
mir126	1
mir135	1
mir143	1
mir145	1
mir155	1
mir15a	1
mir16-1	1
mir199	1
mir203	1
mir449	1
mirna221	1
mirna222	1
mirna_discovery	1
mixture_models	1
modules	1
myb	1
neural_networks	1
news	1
nomogram	1
oncogene	1
oncogene_addiction	1
p21	1
pancreatic_cancer	1
passenger_genes	1
pbc	1
permutations	1
perturbation	1
pilot_study	1
power_analysis	1
prb	1
pre-post	1
randomization	1
rb	1
read_mapping	1
ret	1
rnai	1
rna-interference	1
sampling	1
selection_bias	1
shrna	1
signaling	1
simulation	1
smad7	1
stageiii	1
stem_cells	1
study_design	1
translocation	1
ucs	1
web_server	1
wiki	1

jfr's bioinformatics [121 articles] Export

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