jfr's breast_cancer [at least 200 articles] Export

Recent papers added to jfr's library classified by the tag breast_cancer. You can also see everyone's breast_cancer.

	Predictive signatures for chemotherapy sensitivity in breast cancer: are they ready for use in the clinic? [My Copy] European journal of cancer (Oxford, England : 1990), Vol. 45, No. 10. (July 2009), pp. 1733-1743. by Hervé Bonnefoi, Craig Underhill, Richard Iggo, David Cameron posted to review gene_expression classification chemotherapy breast_cancer by jfr on 2009-11-20 14:14:30 as
	Validation of gene signatures that predict the response of breast cancer to neoadjuvant chemotherapy: a substudy of the EORTC 10994/BIG 00-01 clinical trial. [My Copy] The lancet oncology, Vol. 8, No. 12. (December 2007), pp. 1071-1078. by Hervé Bonnefoi, Anil Potti, Mauro Delorenzi, et al.Louis Mauriac, Mario Campone, Michèle Tubiana-Hulin, Thierry Petit, Philippe Rouanet, Jacek Jassem, Emmanuel Blot, Véronique Becette, Pierre Farmer, Sylvie André, Chaitanya R. Acharya, Sayan Mukherjee, David Cameron, Jonas Bergh, Joseph R. Nevins, Richard D. Iggo posted to validation gene_expression classification chemotherapy breast_cancer by jfr on 2009-11-20 13:58:47 as along with 1 person frohike
	Basal-like breast carcinoma: from expression profiling to routine practice. [My Copy] Archives of pathology & laboratory medicine, Vol. 133, No. 6. (June 2009), pp. 860-868. by Emad Rakha, Jorge S. Reis-Filho posted to review breast_cancer basal_subtype by jfr on 2009-11-20 13:23:50 as
	Inter-observer reproducibility of HER2 immunohistochemical assessment and concordance with fluorescent in situ hybridization (FISH): pathologist assessment compared to quantitative image analysis. [My Copy] BMC cancer, Vol. 9 (29 May 2009), 165. by Gulisa Turashvili, Samuel Leung, Dmitry Turbin, et al.Kelli Montgomery, Blake Gilks, Rob West, Melinda Carrier, David Huntsman, Samuel Aparicio posted to immunohistochemistry her2 fish concordance breast_cancer by jfr on 2009-11-19 13:36:57 as along with 1 person gturashvili
	Chromosomal instability determines taxane response. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 106, No. 21. (26 May 2009), pp. 8671-8676. by Charles Swanton, Barbara Nicke, Marion Schuett, et al.Aron C. Eklund, Charlotte Ng, Qiyuan Li, Thomas Hardcastle, Alvin Lee, Rajat Roy, Philip East, Maik Kschischo, David Endesfelder, Paul Wylie, Se Nyun N. Kim, Jie-Guang G. Chen, Michael Howell, Thomas Ried, Jens K. Habermann, Gert Auer, James D. Brenton, Zoltan Szallasi, Julian Downward posted to taxane classification cin breast_cancer by jfr on 2009-11-18 14:23:36 as
	Local recurrence after breast-conserving therapy in relation to gene expression patterns in a large series of patients. [My Copy] Clinical cancer research : an official journal of the American Association for Cancer Research, Vol. 15, No. 12. (15 June 2009), pp. 4181-4190. by Bas Kreike, Hans Halfwerk, Nicola Armstrong, et al.Peter Bult, John A. Foekens, Sanne C. Veltkamp, Dimitry S. Nuyten, Harry Bartelink, Marc J. van de Vijver posted to proliferation gene_expression early-stage breast_cancer by jfr on 2009-11-18 14:09:07 as
	Data driven derivation of cutoffs from a pool of 3,030 Affymetrix arrays to stratify distinct clinical types of breast cancer. [My Copy] Breast cancer research and treatment (20 May 2009) by Thomas Karn, Dirk Metzler, Eugen Ruckhäberle, et al.Lars Hanker, Regine Gätje, Christine Solbach, Andre Ahr, Marcus Schmidt, Uwe Holtrich, Manfred Kaufmann, Achim Rody posted to subtypes proliferation pr meta-analysis her2 er breast_cancer by jfr on 2009-11-18 13:14:00 as
	Ki67 index, HER2 status, and prognosis of patients with luminal B breast cancer. [My Copy] Journal of the National Cancer Institute, Vol. 101, No. 10. (20 May 2009), pp. 736-750. by Maggie C. Cheang, Stephen K. Chia, David Voduc, et al.Dongxia Gao, Samuel Leung, Jacqueline Snider, Mark Watson, Sherri Davies, Philip S. Bernard, Joel S. Parker, Charles M. Perou, Matthew J. Ellis, Torsten O. Nielsen posted to subtypes rt-pcr proliferation pr luminal_subtype immunohistochemistry her2 er breast_cancer by jfr on 2009-11-15 14:43:06 as along with 1 person zufar
	A transcriptional sketch of a primary human breast cancer by 454 deep sequencing. [My Copy] BMC genomics, Vol. 10, No. 1. (2009), 163. by Alessandro Guffanti, Michele Iacono, Paride Pelucchi, et al.Namshin Kim, Giulia Soldà, Larry J. Croft, Ryan J. Taft, Ermanno Rizzi, Marjan Askarian-Amiri, Raoul J. Bonnal, Maurizio Callari, Flavio Mignone, Graziano Pesole, Giovanni Bertalot, Luigi Rossi R. Bernardi, Alberto Albertini, Christopher Lee, John S. Mattick, Ileana Zucchi, Gianluca De Bellis posted to deep_sequencing breast_cancer 454 by jfr on 2009-11-15 14:36:27 as along with 4 people guhjy jonilaserson fenghezi alessandro_guffanti
	MicroRNA signatures predict oestrogen receptor, progesterone receptor and HER2/neu receptor status in breast cancer. [My Copy] Breast cancer research : BCR, Vol. 11, No. 3. (11 May 2009), R27. by Aoife J. Lowery, Nicola Miller, Amanda Devaney, et al.Roisin E. McNeill, Pamela A. Davoren, Christophe Lemetre, Vladimir Benes, Sabine Schmidt, Jonathon Blake, Graham Ball, Michael J. Kerin posted to pr mirna her2 er breast_cancer by jfr on 2009-11-13 11:46:37 as along with 2 people and 1 group tonamswish giovenko microRNA
	Genes that mediate breast cancer metastasis to the brain [My Copy] Nature, Vol. 459, No. 7249. (06 May 2009), pp. 1005-1009. by Paula D. Bos, Xiang H. F. Zhang, Cristina Nadal, et al.Weiping Shu, Roger R. Gomis, Don X. Nguyen, Andy J. Minn, Marc J. van de Vijver, William L. Gerald, John A. Foekens, Joan Massague posted to metastasis breast_cancer by jfr on 2009-11-10 17:34:02 as along with 2 people tonamswish lwaldron
	Breast Cancer Subtypes and Response to Docetaxel in Node-Positive Breast Cancer: Use of an Immunohistochemical Definition in the BCIRG 001 Trial [My Copy] J Clin Oncol (9 February 2009), JCO.2008.18.1024. by Judith Hugh, John Hanson, Maggie C. Cheang, et al.Torsten O. Nielsen, Charles M. Perou, Charles Dumontet, John Reed, Maryla Krajewska, Isabelle Treilleux, Matthieu Rupin, Emmanuelle Magherini, John Mackey, Miguel Martin, Charles Vogel posted to trial therapy subtypes breast_cancer by jfr on 2009-11-09 13:36:25 as
	Integrated analysis of breast cancer cell lines reveals unique signaling pathways [My Copy] Genome Biology, Vol. 10, No. 3. (25 March 2009), R31. by Laura Heiser, Nicholas Wang, Carolyn Talcott, et al.Keith Laderoute, Merrill Knapp, Yinghui Guan, Zhi Hu, Safiyyah Ziyad, Barbara Weber, Sylvie Laquerre, Jeffrey Jackson, Richard Wooster, Wen Kuo, Joe Gray, Paul Spellman posted to subtypes network cell_line breast_cancer by jfr on 2009-11-09 13:31:09 as along with 4 people and 1 group ipark-kaist thegoose shikin Stew Bioinformatics - CRUK
	Recent advances in systemic therapy. Advances in adjuvant systemic chemotherapy of early breast cancer [My Copy] Breast Cancer Research, Vol. 11, No. 2. (19 March 2009), 204. by Sara L. Tarruella, Miguel Martin posted to review chemotherapy breast_cancer by jfr on 2009-11-08 22:49:51 as
	Recent advances in systemic therapy. New diagnostics and biological predictors of outcome in early breast cancer [My Copy] Breast Cancer Research, Vol. 11, No. 2. (03 April 2009), 205. by Catherine Oakman, Silvia Bessi, Elena Zafarana, Francesca Galardi, Laura Biganzoli, Angelo Di Leo posted to review gene_expression breast_cancer biomarkers by jfr on 2009-11-08 22:48:04 as
	The breast cancer somatic 'muta-ome': tackling the complexity. [My Copy] Breast cancer research : BCR, Vol. 11, No. 2. (30 March 2009), 301. by Andrew E. Teschendorff, Carlos Caldas posted to sequencing mutations copy-number comment breast_cancer by jfr on 2009-11-08 22:45:12 as
	Genomic Grade Index Is Associated With Response to Chemotherapy in Patients With Breast Cancer [My Copy] J Clin Oncol, Vol. 27, No. 19. (1 July 2009), pp. 3185-3191. by Cornelia Liedtke, Christos Hatzis, William F. Symmans, et al.Christine Desmedt, Benjamin Haibe-Kains, Vicente Valero, Henry Kuerer, Gabriel N. Hortobagyi, Martine Piccart-Gebhart, Christos Sotiriou, Lajos Pusztai posted to gene_expression chemotherapy breast_cancer by jfr on 2009-11-08 22:33:09 as
	Molecular classification of solid tumours: towards pathway-driven therapeutics. [My Copy] British journal of cancer, Vol. 100, No. 10. (19 May 2009), pp. 1517-1522. by C. Swanton, C. Caldas posted to subtypes review personalized_medicine breast_cancer by jfr on 2009-11-08 22:22:43 as along with 5 people rdiaz tonamswish guhjy xtizon giovenko
	Genetic Alterations and Oncogenic Pathways Associated with Breast Cancer Subtypes [My Copy] Molecular Cancer Research, Vol. 7, No. 4. (April 2009), pp. 511-522. by Xiaolan Hu, Howard M. Stern, Lin Ge, et al.Carol O'Brien, Lauren Haydu, Cynthia D. Honchell, Peter M. Haverty, Brock A. Peters, Thomas D. Wu, Lukas C. Amler, John Chant, David Stokoe, Mark R. Lackner, Guy Cavet posted to subtypes copy-number breast_cancer by jfr on 2009-11-08 22:06:10 as along with 2 people rdiaz Zephyrus
	Metastatic gene signatures and emerging novel prognostic tests in the management of early stage breast cancer. [My Copy] Clinical & experimental metastasis (18 April 2009) by Attila Tordai, Cornelia Liedtke, Lajos Pusztai posted to review prognosis gene_expression classification breast_cancer by jfr on 2009-11-04 10:24:26 as
	Gene expression profiles and breast cancer metastasis: a genetic perspective. [My Copy] Clinical & experimental metastasis, Vol. 26, No. 6. (2009), pp. 497-503. by Kent W. Hunter, Jude Alsarraj posted to review metastasis breast_cancer by jfr on 2009-11-02 17:51:30 as
	A validated gene expression profile for detecting clinical outcome in breast cancer using artificial neural networks. [My Copy] Breast cancer research and treatment (4 April 2009) by L. J. Lancashire, D. G. Powe, J. S. Reis-Filho, et al.E. Rakha, C. Lemetre, B. Weigelt, T. M. Abdel-Fatah, A. R. Green, R. Mukta, R. Blamey, E. C. Paish, R. C. Rees, I. O. Ellis, G. R. Ball posted to classification breast_cancer by jfr on 2009-11-02 17:50:14 as along with 1 person Zephyrus
	Quantitative assessment of tissue biomarkers and construction of a model to predict outcome in breast cancer using multiple imputation. [My Copy] Cancer informatics, Vol. 7 (2009), pp. 29-40. by John W. Emerson, Marisa Dolled-Filhart, Lyndsay Harris, David L. Rimm, David P. Tuck posted to classification breast_cancer by jfr on 2009-11-02 17:48:29 as
	Copy number alterations that predict metastatic capability of human breast cancer. [My Copy] Cancer research, Vol. 69, No. 9. (1 May 2009), pp. 3795-3801. by Yi Zhang, John W. Martens, Jack X. Yu, et al.John Jiang, Anieta M. Sieuwerts, Marcel Smid, Jan G. Klijn, Yixin Wang, John A. Foekens posted to integration copy-number classification breast_cancer by jfr on 2009-11-02 16:57:47 as along with 4 people giovenko frohike kdpreter rdiaz
	Introducing molecular subtyping of breast cancer into the clinic? [My Copy] Journal of clinical oncology : official journal of the American Society of Clinical Oncology, Vol. 27, No. 8. (10 March 2009), pp. 1153-1154. by Therese Sørlie posted to subtypes comment breast_cancer by jfr on 2009-11-02 16:01:52 as along with 1 person lrust
	Prediction of breast cancer metastasis by genomic profiling: where do we stand? [My Copy] Clinical & experimental metastasis, Vol. 26, No. 6. (2009), pp. 547-558. by Ulrich Pfeffer, Francesco Romeo, Douglas M. Noonan, Adriana Albini posted to review gene_expression breast_cancer by jfr on 2009-09-30 10:09:29 as
	Derivation of molecular signatures for breast cancer recurrence prediction using a two-way validation approach. [My Copy] Breast cancer research and treatment (17 March 2009) by Yijun Sun, Virginia Urquidi, Steve Goodison posted to gene_expression classification breast_cancer by jfr on 2009-09-30 10:06:06 as
	Proliferative genes dominate malignancy-risk gene signature in histologically-normal breast tissue. [My Copy] Breast cancer research and treatment (6 March 2009) by Dung-Tsa T. Chen, Aejaz Nasir, Aedin Culhane, et al.Chinnambally Venkataramu, William Fulp, Renee Rubio, Tao Wang, Deepak Agrawal, Susan M. McCarthy, Mike Gruidl, Gregory Bloom, Tove Anderson, Joe White, John Quackenbush, Timothy Yeatman posted to proliferation gene_expression breast_cancer by jfr on 2009-09-30 10:05:01 as along with 1 person and 1 group Zephyrus Breast Cancer Reading Club
	Gene expression profiling of the tumor microenvironment during breast cancer progression. [My Copy] Breast cancer research : BCR, Vol. 11, No. 1. (02 February 2009), R7. by X. J. Ma, S. Dahiya, E. Richardson, M. Erlander, D. C. Sgroi posted to breast_cancer gene_expression micro_environment by jfr on 2009-07-22 14:23:59 as along with 3 people and 1 group zufar Zephyrus provero cube_and_beyond
	Functional classification analysis of somatically mutated genes in human breast and colorectal cancers. [My Copy] Genomics, Vol. 91, No. 6. (21 June 2008), pp. 508-511. by T. W. Chittenden, E. A. Howe, A. C. Culhane, et al.R. Sultana, J. M. Taylor, C. Holmes, J. Quackenbush posted to breast_cancer can_genes colon_cancer functional_analysis by jfr on 2009-07-22 13:57:06 as along with 2 people fpattyn capitall
	Recurrent gross mutations of the PTEN tumor suppressor gene in breast cancers with deficient DSB repair. [My Copy] Nature genetics, Vol. 40, No. 1. (09 January 2008), pp. 102-107. by L. H. Saal, S. K. Gruvberger-Saal, C. Persson, et al.K. Lövgren, M. Jumppanen, J. Staaf, G. Jönsson, M. M. Pires, M. Maurer, K. Holm, S. Koujak, S. Subramaniyam, J. Vallon-Christersson, H. Olsson, T. Su, L. Memeo, T. Ludwig, S. P. Ethier, M. Krogh, M. Szabolcs, V. V. Murty, J. Isola, H. Hibshoosh, R. Parsons, A. Borg posted to breast_cancer copy-number mutation pten by jfr on 2009-07-22 13:41:41 as
	Supervised risk predictor of breast cancer based on intrinsic subtypes. [My Copy] Journal of clinical oncology : official journal of the American Society of Clinical Oncology, Vol. 27, No. 8. (10 March 2009), pp. 1160-1167. by Joel S. Parker, Michael Mullins, Maggie C. Cheang, et al.Samuel Leung, David Voduc, Tammi Vickery, Sherri Davies, Christiane Fauron, Xiaping He, Zhiyuan Hu, John F. Quackenbush, Inge J. Stijleman, Juan Palazzo, J. S. Marron, Andrew B. Nobel, Elaine Mardis, Torsten O. Nielsen, Matthew J. Ellis, Charles M. Perou, Philip S. Bernard posted to breast_cancer classification subtypes by jfr on 2009-07-22 11:45:47 as along with 2 people misonneh ptrobajo
	Estimation of tumor heterogeneity using CGH array data. [My Copy] BMC bioinformatics, Vol. 10, No. 1. (2009) by K. Wang, J. Li, S. Li, L. Bolund, C. Wiuf posted to breast_cancer copy-number metastasis by jfr on 2009-07-17 15:40:22 as along with 4 people and 1 group mdharsee rdiaz pkonings dswan Bioinformatics
	Tiling path genomic profiling of grade 3 invasive ductal breast cancers. [My Copy] Clinical cancer research : an official journal of the American Association for Cancer Research, Vol. 15, No. 8. (15 April 2009), pp. 2711-2722. by R. Natrajan, M. B. Lambros, S. M. Rodríguez-Pinilla, et al.G. Moreno-Bueno, D. S. Tan, C. Marchió, R. Vatcheva, S. Rayter, B. Mahler-Araujo, L. G. Fulford, D. Hungermann, A. Mackay, A. Grigoriadis, K. Fenwick, N. Tamber, D. Hardisson, A. Tutt, J. Palacios, C. J. Lord, H. Buerger, A. Ashworth, J. S. Reis-Filho posted to breast_cancer copy-number subtypes by jfr on 2009-07-17 10:19:30 as along with 1 person Zephyrus
	T-cell metagene predicts a favorable prognosis in estrogen receptor-negative and HER2-positive breast cancers. [My Copy] Breast cancer research : BCR, Vol. 11, No. 2. (09 March 2009), R15. by Achim Rody, Uwe Holtrich, Laos Pusztai, et al.Cornelia Liedtke, Regine Gaetje, Eugen Ruckhaeberle, Christine Solbach, Lars Hanker, Andre Ahr, Dirk Metzler, Knut Engels, Thomas Karn, Manfred Kaufmann posted to breast_cancer meta-analysis by jfr on 2009-07-10 16:53:10 as along with 1 person Zephyrus
	Mistakes in validating the accuracy of a prediction classifier in high-dimensional but small-sample microarray data. [My Copy] Statistical methods in medical research, Vol. 17, No. 6. (1 December 2008), pp. 635-642. by S. Lee posted to breast_cancer classification tamoxifen validation by jfr on 2009-07-10 16:49:26 as along with 1 person surajitray
	Meta-analysis and gene set enrichment relative to er status reveal elevated activity of MYC and E2F in the "basal" breast cancer subgroup. [My Copy] PloS one, Vol. 4, No. 3. (2009) by M. C. Alles, M. Gardiner-Garden, D. J. Nott, et al.Y. Wang, J. A. Foekens, R. L. Sutherland, E. A. Musgrove, C. J. Ormandy posted to basal_subtype breast_cancer er gene_set_analysis meta-analysis by jfr on 2009-07-10 15:10:48 as along with 4 people zufar shikin bertelsen daforerog
	Direct comparison of logistic regression and recursive partitioning to predict chemotherapy response of breast cancer based on clinical pathological variables. [My Copy] Breast cancer research and treatment (17 January 2009) by Roman Rouzier, Charles Coutant, Bénédicte Lesieur, et al.Chafika Mazouni, Roberto Incitti, René Natowicz, Lajos Pusztai posted to breast_cancer chemotherapy classification treatment by jfr on 2009-07-09 14:01:02 as
	Emerging biomarkers and new understanding of traditional markers in personalized therapy for breast cancer. [My Copy] Clinical cancer research : an official journal of the American Association for Cancer Research, Vol. 14, No. 24. (15 December 2008), pp. 8019-8026. by Mitch Dowsett, Anita K. Dunbier posted to biomarker breast_cancer personalized_medicine review by jfr on 2009-07-09 13:58:00 as along with 2 people Zephyrus misonneh
	Triple-Negative Breast Cancer: Risk Factors to Potential Targets [My Copy] Clin Cancer Res, Vol. 14, No. 24. (15 December 2008), pp. 8010-8018. by Bryan P. Schneider, Eric P. Winer, William D. Foulkes, et al.Judy Garber, Charles M. Perou, Andrea Richardson, George W. Sledge, Lisa A. Carey posted to breast_cancer review subtypes target triple_negative by jfr on 2009-07-09 13:56:12 as along with 3 people and 1 group Zephyrus NaliniChilkov misonneh Breast Cancer Reading Club
	An integrative genomic and proteomic analysis of PIK3CA, PTEN, and AKT mutations in breast cancer. [My Copy] Cancer research, Vol. 68, No. 15. (1 August 2008), pp. 6084-6091. by Katherine Stemke-Hale, Ana Maria M. Gonzalez-Angulo, Ana Lluch, et al.Richard M. Neve, Wen-Lin L. Kuo, Michael Davies, Mark Carey, Zhi Hu, Yinghui Guan, Aysegul Sahin, W. Fraser Symmans, Lajos Pusztai, Laura K. Nolden, Hugo Horlings, Katrien Berns, Mien-Chie C. Hung, Marc J. van de Vijver, Vicente Valero, Joe W. Gray, René Bernards, Gordon B. Mills, Bryan T. Hennessy posted to akt breast_cancer integration mutation pik3ca proteomics pten by jfr on 2009-07-09 13:54:13 as
	Molecular characterization of breast cancer with high-resolution oligonucleotide comparative genomic hybridization array. [My Copy] Clinical cancer research : an official journal of the American Association for Cancer Research, Vol. 15, No. 2. (15 January 2009), pp. 441-451. by F. Andre, B. Job, P. Dessen, et al.A. Tordai, S. Michiels, C. Liedtke, C. Richon, K. Yan, B. Wang, G. Vassal, S. Delaloge, G. N. Hortobagyi, W. F. Symmans, V. Lazar, L. Pusztai posted to array-cgh breast_cancer copy-number gene_expression integration by jfr on 2009-07-06 12:41:41 as
	Novel tumor sampling strategies to enable microarray gene expression signatures in breast cancer: a study to determine feasibility and reproducibility in the context of clinical care. [My Copy] Breast cancer research and treatment (18 February 2009) by Christopher L. Tebbit, Jun Zhai, Brian R. Untch, et al.Matthew J. Ellis, Holly K. Dressman, Rex C. Bentley, Jay A. Baker, Paul K. Marcom, Joseph R. Nevins, Jeffrey R. Marks, John A. Olson posted to breast_cancer estrogen gene_expression her2 by jfr on 2009-07-03 14:21:22 as
	Identification of miR-21 targets in breast cancer cells using a quantitative proteomic approach. [My Copy] Proteomics, Vol. 9, No. 5. (March 2009), pp. 1374-1384. by Y. Yang, R. Chaerkady, M. A. Beer, J. T. Mendell, A. Pandey posted to breast_cancer mir21 mirna mirna_target proteomics by jfr on 2009-07-01 15:21:09 as along with 1 person and 1 group gbloeb microRNA
	Daily clinical practice of fresh tumour tissue freezing and gene expression profiling; logistics pilot study preceding the MINDACT trial. [My Copy] European journal of cancer (Oxford, England : 1990), Vol. 45, No. 7. (May 2009), pp. 1201-1208. by S. Mook, H. Bonnefoi, G. Pruneri, et al.D. Larsimont, J. Jaskiewicz, M. D. Sabadell, G. Macgrogan, L. J. Van't Veer, F. Cardoso, E. J. Rutgers posted to breast_cancer protocol sop trial by jfr on 2009-07-01 15:06:09 as
	Knowledge driven decomposition of tumor expression profiles [My Copy] BMC Bioinformatics, Vol. 10, No. Suppl 1. (2009), S20. by Martin van Vliet, Lodewyk Wessels, Marcel Reinders posted to breast_cancer gene_set_analysis subtypes by jfr on 2009-06-30 17:06:46 as along with 1 person and 1 group zufar Bioinformatics
	Gene expression meta-analysis identifies metastatic pathways and transcription factors in breast cancer [My Copy] BMC Cancer, Vol. 8 (30 December 2008), 394. by Mads, Torben A. Kruse posted to breast_cancer gene_expression meta-analysis pathway_analysis by jfr on 2009-06-25 13:07:17 as along with 2 people daforerog rdiaz
	DNA copy number alterations and expression of relevant genes in triple-negative breast cancer. [My Copy] Genes, chromosomes & cancer, Vol. 47, No. 6. (June 2008), pp. 490-499. by W. Han, E. M. Jung, J. Cho, et al.J. W. Lee, K. T. Hwang, S. J. Yang, J. J. Kang, J. Y. Bae, Y. K. Jeon, I. A. Park, M. Nicolau, S. S. Jeffrey, D. Y. Noh posted to breast_cancer copy-number triple_negative by jfr on 2009-06-24 10:49:09 as
	Computational analysis of microRNA profiles and their target genes suggests significant involvement in breast cancer antiestrogen resistance [My Copy] Bioinformatics, Vol. 25, No. 4. (15 February 2009), pp. 430-434. by Fuxiao Xin, Meng Li, Curt Balch, et al.Michael Thomson, Meiyun Fan, Yunlong Liu, Scott M. Hammond, Sun Kim, Kenneth P. Nephew posted to breast_cancer estrogen mirna mirna_target by jfr on 2009-06-24 10:41:54 as along with 2 people and 1 group ealloza dolchan microRNA
	Gene expression patterns in formalin-fixed, paraffin-embedded core biopsies predict docetaxel chemosensitivity in breast cancer patients. [My Copy] Breast cancer research and treatment, Vol. 108, No. 2. (March 2008), pp. 233-240. by J. C. Chang, A. Makris, M. C. Gutierrez, et al.S. G. Hilsenbeck, J. R. Hackett, J. Jeong, M. L. Liu, J. Baker, K. Clark-Langone, F. L. Baehner, K. Sexton, S. Mohsin, T. Gray, L. Alvarez, G. C. Chamness, C. K. Osborne, S. Shak posted to breast_cancer classification gene_expression rt-pcr therapy by jfr on 2009-06-24 10:01:34 as

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breast_cancer	468
review	336
mirna	333
classification	268
software	268
colon_cancer	227
gene_expression	169
methodology	168
copy-number	153
network	148
microarray_technology	133
integration	132
bioinformatics	121
clustering	119
feature_selection	105
meta-analysis	94
affy	83
database	81
therapy	80
mirna_target	74
array-cgh	69
crc_bib	69
gene_set_analysis	67
low_level	66
regulation	63
systems_biology	62
pathway_analysis	60
rt-pcr	60
genomics	58
subtypes	57
annotation	56
snp-arrays	56
comment	51
quality_control	48
normalization	44
mutations	43
metastasis	42
ffpe	41
prognosis	41
deep_sequencing	40
estrogen	40
microarray_analysis	40
proteomics	38
bioconductor	37
cancer	37
statistics	36
alternative_splicing	35
progression	35
protein_interaction	35
fdr	34
markers	34
methylation	32
snp	32
class_discovery	28
r	28
tamoxifen	28
mutation	27
standards	26
exon_arrays	25
jfrbib	24
microarray_protocol	23
mir17-92	23
two-color	23
experiment_design	22
pathway	22
brca	21
co-expression	21
comparison	21
ovarian_cancer	21
model	20
survival_analysis	20
tfbs	20
treatment	19
functional_analysis	18
kras	18
p53	18
platform_comparison	18
chip-chip	16
evaluation	16
illumina	16
jfrbib04-09	16
multiple_testing	16
stem_cell	16
technology	16
antisense	15
biomarker	15
module_detection	15
nmf	15
text-mining	15
basal_subtype	14
erbb	14
sequencing	14
bio_signature	13
reproducible_research	13
rna_quality	13
stageii	13
staging	13
tma	13
cnv	12
egfr	12
gene_ontology	12
genotyping	12
lung_cancer	12
maqc	12
marker	12
cell_line	11
drug_discovery	11
missing_values	11
proliferation	11
protocol	11
control_genes	10
disease_genes	10
gene_lists	10
genome_browser	10
loh	10
pten	10
semantic_web	10
tissue_specificity	10
visualization	10
immunohistochemistry	9
msi	9
probe_design	9
segmentation	9
boutique_arrays	8
can_genes	8
chip-seq	8
consensus_clustering	8
e2f1	8
inter-laboratory	8
mirna_regulation	8
personalized_medicine	8
sample_size	8
tgfb	8
time-course	8
18q_loh	7
lymphoma	7
myc	7
tiling_array	7
validation	7
community	6
editorial	6
gene_interaction	6
graphs	6
hpc	6
leukemia	6
motif	6
nci60	6
non-coding	6
ontology	6
plos_rules	6
promoters	6
read_mapping	6
serum	6
stem	6
chemotherapy	5
cin	5
correlation	5
cross-platform	5
gene_pairs	5
grid_computing	5
gwas	5
her2	5
machine_learning	5
mir21	5
plos_primer	5
plos_start	5
radiation	5
trial	5
biobank	4
data_curation	4
er	4
go	4
grading	4
image_analysis	4
lims	4
mir34	4
mirna_cluster	4
pooling	4
prioritization	4
prostate_cancer	4
public_data	4
resource	4
web_services	4
agilent	3
apc	3
bim	3
biomarkers	3
chromatin	3
confounders	3
copa	3
evolution	3
functional_classification	3
functional_genomics	3
hapmap	3
interaction	3
loops	3
mass_spec	3
micro_environment	3
mir192	3
ontologies	3
open-source	3
outlier	3
pca	3
pik3ca	3
pr	3
primer	3
roc	3
sage	3
small_molecule	3
sop	3
stability	3
stroma	3
survival	3
triple_negative	3
tutorial	3
wnt	3
20q	2
8q24	2
alignment	2
batch-effect	2
bcatenin	2
caching	2
cdk8	2
cetuximab	2
chemo	2
diagnostic	2
dna_damage	2
ephb	2
epigenetics	2
er-positive	2
filtering	2
flow_cytometry	2
gene_fusion	2
glioblastoma	2
guidelines	2
in-situ	2
letter	2
local_recurrence	2
luminal_subtype	2
lymphocytes	2
mage	2
meeting_report	2
mir20a	2
mir215	2
mutual_information	2
oncomine	2
permutations	2
priors	2
projection	2
protein_microarray	2
protein_networks	2
qtl	2
recommendation	2
rin	2
semi-supervised	2
serm	2
smad	2
snp_arrays	2
svm	2
sweave	2
target	2
tbfs	2
thyroid	2
translational	2
upd	2
web_server	2
3utr	1
454	1
aging	1
akt	1
apoptosis	1
aroma	1
asco	1
association_studies	1
au-rich	1
aurora_kinase	1
bayesian	1
beads	1
biclustering	1
bmp	1
braf	1
brain_cancer	1
cables1	1
cancer_hallmarks	1
cell_cycle	1
cervical_cancer	1
circulating_tumor_cells	1
cloud_computing	1
clusterin	1
compression	1
concordance	1
cross-species	1
cross-study	1
dasl	1
dcc	1
dimension_reduction	1
disease	1
distance	1
driver_genes	1
dye_bias	1
early-stage	1
ecm	1
eno1	1
ensemble	1
ependymoma	1
erg	1
er-negative	1
est_analysis	1
estradiol	1
fgfr2	1
fish	1
formalization	1
formats	1
funding	1
gastric_cancer	1
gene_clusters	1
gene_function_prediction	1
genetics	1
genoty	1
graph_approach	1
hypoxia	1
il8	1
in_situ_hybridization	1
invasion	1
latent	1
latex	1
markup	1
mcm7	1
melanoma	1
met	1
meta_analysis	1
metagene	1
microrna	1
mir101	1
mir-106b-25	1
mir126	1
mir135	1
mir143	1
mir145	1
mir155	1
mir15a	1
mir16-1	1
mir199	1
mir203	1
mir449	1
mirna221	1
mirna222	1
mirna_discovery	1
mixture_models	1
model-based	1
modules	1
mrna-seq	1
myb	1
neural_networks	1
news	1
ngs	1
nomogram	1
oncogene	1
oncogene_addiction	1
p21	1
pancreatic_cancer	1
passenger_genes	1
pbc	1
perturbation	1
pilot_study	1
plasma	1
power_analysis	1
prb	1
pre-post	1
python	1
randomization	1
ranked_lists	1
rb	1
ret	1
rnai	1
rna-interference	1
sampling	1
selection_bias	1
shrna	1
signaling	1
simulation	1
single_cell	1
smad7	1
stageiii	1
stem_cells	1
study_design	1
target_discovery	1
taxane	1
tissue_origin	1
translocation	1
ucs	1
wiki	1

jfr's breast_cancer [at least 200 articles] Export

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