jfr's classification [at least 200 articles] Export

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	An introduction to artificial neural networks in bioinformatics--application to complex microarray and mass spectrometry datasets in cancer studies [My Copy] Brief Bioinform, Vol. 10, No. 3. (1 May 2009), pp. 315-329. by Lee J. Lancashire, Christophe Lemetre, Graham R. Ball posted to review neural_networks classification by jfr on 2009-11-04 11:20:37 as along with 7 people and 1 group giovenko eliasman m509396 barry brianb nuin renatomilani Bioinformatics
	Metastatic gene signatures and emerging novel prognostic tests in the management of early stage breast cancer. [My Copy] Clinical & experimental metastasis (18 April 2009) by Attila Tordai, Cornelia Liedtke, Lajos Pusztai posted to review prognosis gene_expression classification breast_cancer by jfr on 2009-11-04 10:24:26 as
	The use of gene ontology evidence codes in preventing classifier assessment bias [My Copy] Bioinformatics, Vol. 25, No. 9. (1 May 2009), pp. 1173-1177. by Mark F. Rogers, Asa Ben-Hur posted to gene_ontology classification by jfr on 2009-11-03 17:15:49 as along with 4 people kshameer vkwn rdiaz dullhunk
	The tspair package for finding top scoring pair classifiers in R [My Copy] Bioinformatics, Vol. 25, No. 9. (1 May 2009), pp. 1203-1204. by Jeffrey T. Leek posted to software r classification by jfr on 2009-11-03 17:14:41 as along with 2 people guhjy rdiaz
	A validated gene expression profile for detecting clinical outcome in breast cancer using artificial neural networks. [My Copy] Breast cancer research and treatment (4 April 2009) by L. J. Lancashire, D. G. Powe, J. S. Reis-Filho, et al.E. Rakha, C. Lemetre, B. Weigelt, T. M. Abdel-Fatah, A. R. Green, R. Mukta, R. Blamey, E. C. Paish, R. C. Rees, I. O. Ellis, G. R. Ball posted to classification breast_cancer by jfr on 2009-11-02 17:50:14 as along with 1 person Zephyrus
	Quantitative assessment of tissue biomarkers and construction of a model to predict outcome in breast cancer using multiple imputation. [My Copy] Cancer informatics, Vol. 7 (2009), pp. 29-40. by John W. Emerson, Marisa Dolled-Filhart, Lyndsay Harris, David L. Rimm, David P. Tuck posted to classification breast_cancer by jfr on 2009-11-02 17:48:29 as
	Network-based support vector machine for classification of microarray samples. [My Copy] BMC bioinformatics, Vol. 10 Suppl 1 (2009) by Yanni Zhu, Xiaotong Shen, Wei Pan posted to svm classification by jfr on 2009-11-02 17:43:55 as along with 1 person iskathy
	A Two-Stage Feature Selection Method for Gene Expression Data. [My Copy] Omics : a journal of integrative biology (30 January 2009) by Li-Yeh Y. Chuang, Chao-Hsuan H. Ke, Hsueh-Wei W. Chang, Cheng-Hong H. Yang posted to feature_selection classification by jfr on 2009-11-02 17:06:02 as
	Copy number alterations that predict metastatic capability of human breast cancer. [My Copy] Cancer research, Vol. 69, No. 9. (1 May 2009), pp. 3795-3801. by Yi Zhang, John W. Martens, Jack X. Yu, et al.John Jiang, Anieta M. Sieuwerts, Marcel Smid, Jan G. Klijn, Yixin Wang, John A. Foekens posted to integration copy-number classification breast_cancer by jfr on 2009-11-02 16:57:47 as along with 4 people giovenko frohike kdpreter rdiaz
	New gene selection method for multiclass tumor classification by class centroid. [My Copy] Journal of biomedical informatics, Vol. 42, No. 1. (February 2009), pp. 59-65. by Qi Shen, Wei-min M. Shi, Wei Kong posted to feature_selection classification by jfr on 2009-11-02 15:57:42 as
	Parallelized prediction error estimation for evaluation of high-dimensional models. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 6. (15 March 2009), pp. 827-829. by Christine Porzelius, Harald Binder, Martin Schumacher posted to software r hpc classification by jfr on 2009-11-02 14:57:38 as along with 3 people rdiaz agomez guhjy
	Derivation of molecular signatures for breast cancer recurrence prediction using a two-way validation approach. [My Copy] Breast cancer research and treatment (17 March 2009) by Yijun Sun, Virginia Urquidi, Steve Goodison posted to gene_expression classification breast_cancer by jfr on 2009-09-30 10:06:06 as
	Supervised risk predictor of breast cancer based on intrinsic subtypes. [My Copy] Journal of clinical oncology : official journal of the American Society of Clinical Oncology, Vol. 27, No. 8. (10 March 2009), pp. 1160-1167. by Joel S. Parker, Michael Mullins, Maggie C. Cheang, et al.Samuel Leung, David Voduc, Tammi Vickery, Sherri Davies, Christiane Fauron, Xiaping He, Zhiyuan Hu, John F. Quackenbush, Inge J. Stijleman, Juan Palazzo, J. S. Marron, Andrew B. Nobel, Elaine Mardis, Torsten O. Nielsen, Matthew J. Ellis, Charles M. Perou, Philip S. Bernard posted to breast_cancer classification subtypes by jfr on 2009-07-22 11:45:47 as along with 2 people misonneh ptrobajo
	Mistakes in validating the accuracy of a prediction classifier in high-dimensional but small-sample microarray data. [My Copy] Statistical methods in medical research, Vol. 17, No. 6. (1 December 2008), pp. 635-642. by S. Lee posted to breast_cancer classification tamoxifen validation by jfr on 2009-07-10 16:49:26 as along with 1 person surajitray
	Direct comparison of logistic regression and recursive partitioning to predict chemotherapy response of breast cancer based on clinical pathological variables. [My Copy] Breast cancer research and treatment (17 January 2009) by Roman Rouzier, Charles Coutant, Bénédicte Lesieur, et al.Chafika Mazouni, Roberto Incitti, René Natowicz, Lajos Pusztai posted to breast_cancer chemotherapy classification treatment by jfr on 2009-07-09 14:01:02 as
	Incorporating pathway information into boosting estimation of high-dimensional risk prediction models [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 18. by Harald Binder, Martin Schumacher posted to classification feature_selection pathway by jfr on 2009-07-09 12:42:13 as along with 5 people and 1 group zufar ajbattle rdiaz guhjy mdstobbe Bioinformatics
	An integrated method for cancer classification and rule extraction from microarray data. [My Copy] Journal of biomedical science, Vol. 16 (2009) by L. T. Huang posted to classification methodology by jfr on 2009-07-09 12:38:36 as along with 1 group Bioinformatics
	Reduced expression of a gene proliferation signature is associated with enhanced malignancy in colon cancer. [My Copy] British journal of cancer, Vol. 99, No. 6. (16 September 2008), pp. 966-973. by A. Anjomshoaa, Y. H. Lin, M. A. Black, et al.J. L. McCall, B. Humar, S. Song, R. Fukuzawa, H. S. Yoon, B. Holzmann, J. Friederichs, A. van Rij, M. Thompson-Fawcett, A. E. Reeve posted to classification colon_cancer proliferation by jfr on 2009-07-01 14:47:34 as
	A voting approach to identify a small number of highly predictive genes using multiple classifiers. [My Copy] BMC bioinformatics, Vol. 10 Suppl 1 (2009) by M. R. Hassan, M. M. Hossain, J. Bailey, G. Macintyre, J. W. Ho, K. Ramamohanarao posted to classification feature_selection by jfr on 2009-06-26 16:25:31 as
	Gene expression patterns in formalin-fixed, paraffin-embedded core biopsies predict docetaxel chemosensitivity in breast cancer patients. [My Copy] Breast cancer research and treatment, Vol. 108, No. 2. (March 2008), pp. 233-240. by J. C. Chang, A. Makris, M. C. Gutierrez, et al.S. G. Hilsenbeck, J. R. Hackett, J. Jeong, M. L. Liu, J. Baker, K. Clark-Langone, F. L. Baehner, K. Sexton, S. Mohsin, T. Gray, L. Alvarez, G. C. Chamness, C. K. Osborne, S. Shak posted to breast_cancer classification gene_expression rt-pcr therapy by jfr on 2009-06-24 10:01:34 as
	Prognostic gene signatures for non-small-cell lung cancer [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 8. (24 February 2009), pp. 2824-2828. by Paul C. Boutros, Suzanne K. Lau, Melania Pintilie, et al.Ni Liu, Frances A. Shepherd, Sandy D. Der, Ming-Sound Tsao, Linda Z. Penn, Igor Jurisica posted to classification lung_cancer by jfr on 2009-06-16 16:57:26 as along with 4 people lwaldron rdiaz ipark-kaist provero
	Gene-Expression Signatures in Breast Cancer [My Copy] N Engl J Med, Vol. 360, No. 8. (19 February 2009), pp. 790-800. by Christos Sotiriou, Lajos Pusztai posted to breast_cancer classification gene_expression review subtypes by jfr on 2009-06-16 16:52:11 as along with 6 people and 1 group songpku giovenko tonamswish Zephyrus edwardli misonneh Breast Cancer Reading Club
	A method for constructing a confidence bound for the actual error rate of a prediction rule in high dimensions [My Copy] Biostat, Vol. 10, No. 2. (1 April 2009), pp. 282-296. by Kevin K. Dobbin posted to classification statistics by jfr on 2009-06-16 16:20:11 as along with 3 people rdiaz lptolik djkt
	The Origins of Breast Cancer Prognostic Gene Expression Profiles [My Copy] Cancer Res, Vol. 69, No. 1. (1 January 2009), pp. 310-318. by Luanne Lukes, Nigel P. S. Crawford, Renard Walker, Kent W. Hunter posted to breast_cancer classification gene_expression prognosis by jfr on 2009-06-15 16:32:50 as along with 4 people and 2 groups frohike Zephyrus wimufi songpku Roswell Cancer Crosstalk Breast Cancer Reading Club
	Feature selection environment for genomic applications [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (22 October 2008), 451. by Fabricio Lopes, David Martins, Roberto Cesar posted to classification feature_selection software by jfr on 2009-06-12 09:25:47 as along with 6 people rdiaz TRHvidsten GustavoG imina lptolik operon
	Gene expression signature for recurrence in stage III colorectal cancers. [My Copy] Cancer, Vol. 115, No. 2. (15 January 2009), pp. 283-292. by T. Watanabe, T. Kobunai, E. Sakamoto, et al.Y. Yamamoto, T. Konishi, A. Horiuchi, R. Shimada, T. Oka, H. Nagawa posted to classification colon_cancer gene_expression stageiii by jfr on 2009-06-10 13:57:38 as
	On reliable discovery of molecular signatures [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (29 January 2009), 38. by Roland Nilsson, Johan Bjorkegren, Jesper Tegner posted to classification fdr by jfr on 2009-05-04 13:00:07 as along with 4 people and 1 group ptrobajo Zephyrus renatomilani guhjy Roswell Cancer Crosstalk
	Gene expression profiles differentiating between breast cancers clinically responsive or resistant to letrozole. [My Copy] Journal of clinical oncology : official journal of the American Society of Clinical Oncology, Vol. 27, No. 9. (20 March 2009), pp. 1382-1387. by W. R. Miller, A. Larionov, L. Renshaw, et al.T. J. Anderson, J. R. Walker, A. Krause, T. Sing, D. B. Evans, J. M. Dixon posted to breast_cancer classification gene_expression therapy by jfr on 2009-04-29 16:05:40 as
	CMA - A comprehensive Bioconductor package for supervised classification with high dimensional data [My Copy] BMC Bioinformatics, Vol. 9, No. 1. (2008) by Martin Slawski, Martin Daumer, Anne L. Boulesteix posted to bioconductor classification r software by jfr on 2009-04-28 10:14:16 as along with 9 people and 1 group Stew anf akastrin rdiaz nuin guhjy druvus pengchy GeeSharpMinor Bioinformatics - CRUK
	Discovery of Dominant and Dormant Genes from Expression Data Using a Novel Generalization of SNR for Multi-class Problems [My Copy] BMC Bioinformatics, Vol. 9 (09 October 2008), 425. by Yu-Shuen Tsai, Chin-Teng Lin, George C. Tseng, I-Fang Chung, Nikhil R. Pal posted to classification feature_selection by jfr on 2009-04-28 10:12:26 as
	New evaluation measures for multifactor dimensionality reduction classifiers in gene-gene interaction analysis [My Copy] Bioinformatics, Vol. 25, No. 3. (1 February 2009), pp. 338-345. by Junghyun Namkung, Kyunga Kim, Sungon Yi, Wonil Chung, Min-Seok Kwon, Taesung Park posted to classification by jfr on 2009-04-20 10:28:34 as along with 3 people rdiaz daforerog pkonings
	A genetic programming-based approach to the classification of multiclass microarray datasets [My Copy] Bioinformatics, Vol. 25, No. 3. (1 February 2009), pp. 331-337. by Kun-Hong Liu, Chun-Gui Xu posted to classification by jfr on 2009-04-20 10:26:22 as along with 4 people ptrobajo turnersd rdiaz nuin
	Microarray-based Gene Expression Profiling as a Clinical Tool for Breast Cancer Management: Are We There Yet? [My Copy] International journal of surgical pathology (22 December 2008) by Felipe Correa C. Geyer, Jorge Sergio S. Reis-Filho posted to breast_cancer classification gene_expression review by jfr on 2009-03-24 15:17:33 as along with 1 person Zephyrus
	An expression meta-analysis of predicted microRNA targets identifies a diagnostic signature for lung cancer. [My Copy] BMC medical genomics, Vol. 1 (2008) by Y. Liang posted to classification gene_ontology lung_cancer meta-analysis mir34 mir449 mirna mirna_target by jfr on 2009-03-23 15:25:27 as along with 1 person and 1 group mtagaya microRNA
	Machine learning-based receiver operating characteristic (ROC) curves for crisp and fuzzy classification of DNA microarrays in cancer research. [My Copy] International journal of approximate reasoning : official publication of the North American Fuzzy Information Processing Society, Vol. 47, No. 1. (January 2008), pp. 17-36. by Leif E E. Peterson, Matthew A A. Coleman posted to classification machine_learning roc by jfr on 2009-03-23 14:29:57 as
	Confirmation of Gene Expression-Based Prediction of Survival in Non-Small Cell Lung Cancer [My Copy] Clin Cancer Res, Vol. 14, No. 24. (15 December 2008), pp. 8213-8220. by Nancy L. Guo, Ying-Wooi Wan, Kursad Tosun, et al.Hong Lin, Zola Msiska, Daniel C. Flynn, Scot C. Remick, Val Vallyathan, Afshin Dowlati, Xianglin Shi, Vincent Castranova, David G. Beer, Yong Qian posted to classification lung_cancer by jfr on 2009-03-23 14:19:32 as along with 1 person giovenko
	A five-gene signature and clinical outcome in non-small-cell lung cancer. [My Copy] N Engl J Med, Vol. 356, No. 1. (4 January 2007), pp. 11-20. by H. Y. Chen, S. L. Yu, C. H. Chen, et al.G. C. Chang, C. Y. Chen, A. Yuan, C. L. Cheng, C. H. Wang, H. J. Terng, S. F. Kao, W. K. Chan, H. N. Li, C. C. Liu, S. Singh, W. J. Chen, J. J. Chen, P. C. Yang posted to classification lung_cancer rt-pcr by jfr on 2009-03-23 14:00:59 as along with 2 people guhjy frohike
	Inferring Pathway Activity toward Precise Disease Classification [My Copy] PLoS Comput Biol, Vol. 4, No. 11. (7 November 2008), e1000217. by Eunjung Lee, Han-Yu Chuang, Jong-Won Kim, Trey Ideker, Doheon Lee posted to classification methodology pathway_analysis by jfr on 2009-03-13 11:29:35 as along with 13 people rschulz isimpson yaredo frohike ipark-kaist aviad_work ajbattle zufar carlk renatomilani dragonrez tmmurali ptrobajo
	A genomic approach to colon cancer risk stratification yields biologic insights into therapeutic opportunities [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 49. (December 2008), pp. 19432-19437. by Katherine S. Garman, Chaitanya R. Acharya, Elena Edelman, et al.Marian Grade, Jochen Gaedcke, Shivani Sud, William Barry, Anna M. Diehl, Dawn Provenzale, Geoffrey S. Ginsburg, Michael B. Ghadimi, Thomas Ried, Joseph R. Nevins, Sayan Mukherjee, David Hsu, Anil Potti posted to bio_signature classification colon_cancer therapy by jfr on 2009-03-13 11:22:19 as along with 2 people misonneh sg45653
	A 38-gene expression signature to predict metastasis risk in node-positive breast cancer after systemic adjuvant chemotherapy: a genomic substudy of PACS01 clinical trial [My Copy] Breast Cancer Research and Treatment by Pascal Jézéquel, Mario Campone, Henri Roché, et al.Wilfried Gouraud, Catherine Charbonnel, Gabriel Ricolleau, Florence Magrangeas, Stéphane Minvielle, Jean Genève, Anne-Laure Martin, Régis Bataille, Loïc Campion posted to breast_cancer classification public_data therapy by jfr on 2009-03-12 11:02:35 as along with 1 person Zephyrus
	Molecular classification and correlates in colorectal cancer. [My Copy] The Journal of molecular diagnostics : JMD, Vol. 10, No. 1. (January 2008), pp. 13-27. by S. Ogino, A. Goel posted to cin classification colon_cancer mutation review by jfr on 2009-02-25 17:55:02 as
	Expression profiling identifies genes that predict recurrence of breast cancer after adjuvant CMF-based chemotherapy. [My Copy] Breast cancer research and treatment (17 October 2008) by Katja Specht, Nadia Harbeck, Jan Smida, et al.Katja Annecke, Ulrike Reich, Joerg Naehrig, Rupert Langer, Joerg Mages, Raymonde Busch, Elisabeth Kruse, Ludger Klein-Hitpass, Manfred Schmitt, Marion Kiechle, Heinz Hoefler posted to breast_cancer classification therapy by jfr on 2009-02-20 11:19:51 as
	Tumor classification ranking from microarray data. [My Copy] BMC genomics, Vol. 9 Suppl 2 (2008) by R. Hewett, P. Kijsanayothin posted to classification by jfr on 2009-02-18 14:25:27 as
	Biomarker discovery across annotated and unannotated microarray datasets using semi-supervised learning [My Copy] BMC Genomics, Vol. 9, No. Suppl 2. (2008) by Cole Harris, Noushin Ghaffari posted to biomarker classification semi-supervised by jfr on 2009-02-18 14:19:52 as along with 3 people noushin guhjy frohike
	Molecular profiles of progesterone receptor loss in human breast tumors. [My Copy] Breast cancer research and treatment (19 April 2008) by Chad J. Creighton, C Kent Osborne, Marc J. van de Vijver, et al.John A. Foekens, Jan G. Klijn, Hugo M. Horlings, Dimitry Nuyten, Yixin Wang, Yi Zhang, Gary C. Chamness, Susan G. Hilsenbeck, Adrian V. Lee, Rachel Schiff posted to breast_cancer classification gene_expression by jfr on 2009-01-10 14:13:26 as along with 1 person Zephyrus
	Finding rule groups to classify high dimensional gene expression datasets. [My Copy] Computational biology and chemistry, Vol. 33, No. 1. (February 2009), pp. 108-113. by J. An, Y. P. Chen posted to classification feature_selection by jfr on 2009-01-10 11:23:34 as along with 1 person Zephyrus
	Very Important Pool (VIP) genes--an application for microarray-based molecular signatures. [My Copy] BMC bioinformatics, Vol. 9 Suppl 9 (2008) by Z. Su, H. Hong, H. Fang, L. Shi, R. Perkins, W. Tong posted to classification feature_selection by jfr on 2009-01-10 11:17:37 as along with 1 person guhjy
	A prognostic model for the combined analysis of gene expression profiling in hepatocellular carcinoma. [My Copy] Bioinformation, Vol. 2, No. 9. (2008), pp. 395-400. by Z. C. Benny, L. J. Jack, W. Nathalie, et al.Y. Winnie, L. B. Paul, M. S. Tony, C. T. Anthony posted to classification copy-number gene_expression integration by jfr on 2009-01-09 11:35:35 as
	Functional genomic analysis of drug sensitivity pathways to guide adjuvant strategies in breast cancer [My Copy] Breast Cancer Research, Vol. 10 (31 October 2008), 214. by Charles Swanton, Zoltan Szallasi, James D. Brenton, Julian Downward posted to classification pathway_analysis review therapy by jfr on 2009-01-07 11:36:10 as
	Pooling breast cancer datasets has a synergetic effect on classification performance and improves signature stability. [My Copy] BMC genomics, Vol. 9, No. 1. (06 August 2008), 375. by Martin H. van Vliet, Fabien Reyal, Hugo M. Horlings, Marc J. van de Vijver, Marcel J. Reinders, Lodewyk F. Wessels posted to breast_cancer classification meta-analysis stability by jfr on 2008-12-09 10:56:43 as along with 2 people ptrobajo jjrodriguez

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breast_cancer	458
review	330
mirna	324
classification	261
software	257
colon_cancer	224
methodology	168
gene_expression	157
copy-number	152
network	147
microarray_technology	132
integration	130
bioinformatics	121
clustering	117
feature_selection	105
meta-analysis	89
affy	82
database	79
therapy	79
mirna_target	71
crc_bib	69
array-cgh	68
gene_set_analysis	66
low_level	65
regulation	63
systems_biology	61
pathway_analysis	59
genomics	58
snp-arrays	56
subtypes	55
annotation	54
rt-pcr	53
comment	49
quality_control	47
mutations	43
metastasis	41
normalization	41
prognosis	41
estrogen	40
ffpe	39
microarray_analysis	39
cancer	37
alternative_splicing	35
deep_sequencing	35
progression	35
protein_interaction	35
proteomics	35
statistics	35
markers	34
bioconductor	33
fdr	33
methylation	32
snp	31
class_discovery	28
tamoxifen	28
mutation	27
r	27
exon_arrays	25
standards	25
jfrbib	24
microarray_protocol	23
two-color	23
experiment_design	22
mir17-92	22
brca	21
ovarian_cancer	21
co-expression	20
comparison	20
model	20
pathway	20
tfbs	20
survival_analysis	19
functional_analysis	18
p53	18
treatment	18
kras	17
platform_comparison	17
evaluation	16
illumina	16
jfrbib04-09	16
stem_cell	16
antisense	15
biomarker	15
chip-chip	15
module_detection	15
multiple_testing	15
nmf	15
technology	15
erbb	14
sequencing	14
text-mining	14
basal_subtype	13
bio_signature	13
reproducible_research	13
stageii	13
staging	13
tma	13
cnv	12
genotyping	12
lung_cancer	12
marker	12
cell_line	11
drug_discovery	11
egfr	11
gene_ontology	11
maqc	11
missing_values	11
protocol	11
rna_quality	11
gene_lists	10
genome_browser	10
loh	10
tissue_specificity	10
disease_genes	9
msi	9
probe_design	9
pten	9
segmentation	9
semantic_web	9
boutique_arrays	8
can_genes	8
control_genes	8
e2f1	8
mirna_regulation	8
personalized_medicine	8
proliferation	8
sample_size	8
tgfb	8
visualization	8
18q_loh	7
chip-seq	7
consensus_clustering	7
immunohistochemistry	7
inter-laboratory	7
lymphoma	7
myc	7
tiling_array	7
community	6
editorial	6
gene_interaction	6
graphs	6
hpc	6
leukemia	6
motif	6
non-coding	6
plos_rules	6
promoters	6
serum	6
stem	6
time-course	6
validation	6
correlation	5
gene_pairs	5
grid_computing	5
gwas	5
machine_learning	5
mir21	5
nci60	5
ontology	5
plos_primer	5
trial	5
biobank	4
cin	4
cross-platform	4
data_curation	4
go	4
grading	4
image_analysis	4
lims	4
mir34	4
mirna_cluster	4
plos_start	4
pooling	4
prioritization	4
prostate_cancer	4
radiation	4
resource	4
agilent	3
apc	3
bim	3
biomarkers	3
chemotherapy	3
chromatin	3
confounders	3
copa	3
evolution	3
functional_classification	3
hapmap	3
interaction	3
loops	3
mass_spec	3
micro_environment	3
mir192	3
open-source	3
outlier	3
pca	3
pik3ca	3
primer	3
public_data	3
roc	3
sage	3
small_molecule	3
sop	3
stability	3
stroma	3
survival	3
triple_negative	3
tutorial	3
web_services	3
wnt	3
20q	2
8q24	2
alignment	2
batch-effect	2
bcatenin	2
caching	2
cdk8	2
chemo	2
diagnostic	2
dna_damage	2
ephb	2
epigenetics	2
er-positive	2
filtering	2
gene_fusion	2
glioblastoma	2
guidelines	2
in-situ	2
letter	2
local_recurrence	2
lymphocytes	2
mage	2
meeting_report	2
mir20a	2
mir215	2
mutual_information	2
oncomine	2
ontologies	2
priors	2
projection	2
protein_microarray	2
protein_networks	2
qtl	2
read_mapping	2
recommendation	2
semi-supervised	2
serm	2
smad	2
snp_arrays	2
svm	2
sweave	2
target	2
tbfs	2
thyroid	2
translational	2
upd	2
3utr	1
aging	1
akt	1
apoptosis	1
aroma	1
asco	1
association_studies	1
au-rich	1
aurora_kinase	1
bayesian	1
beads	1
biclustering	1
bmp	1
braf	1
brain_cancer	1
cables1	1
cell_cycle	1
cervical_cancer	1
circulating_tumor_cells	1
clusterin	1
compression	1
cross-study	1
dasl	1
dcc	1
dimension_reduction	1
disease	1
distance	1
driver_genes	1
dye_bias	1
ecm	1
eno1	1
ensemble	1
ependymoma	1
er	1
erg	1
er-negative	1
est_analysis	1
estradiol	1
fgfr2	1
flow_cytometry	1
formalization	1
formats	1
funding	1
gastric_cancer	1
gene_clusters	1
gene_function_prediction	1
genetics	1
genoty	1
her2	1
hypoxia	1
il8	1
in_situ_hybridization	1
invasion	1
latent	1
luminal_subtype	1
mcm7	1
melanoma	1
met	1
meta_analysis	1
metagene	1
microrna	1
mir101	1
mir-106b-25	1
mir126	1
mir135	1
mir143	1
mir145	1
mir155	1
mir15a	1
mir16-1	1
mir199	1
mir203	1
mir449	1
mirna221	1
mirna222	1
mirna_discovery	1
mixture_models	1
modules	1
mrna-seq	1
myb	1
neural_networks	1
news	1
nomogram	1
oncogene	1
oncogene_addiction	1
p21	1
pancreatic_cancer	1
passenger_genes	1
pbc	1
permutations	1
perturbation	1
pilot_study	1
power_analysis	1
prb	1
pre-post	1
randomization	1
ranked_lists	1
rb	1
ret	1
rnai	1
rna-interference	1
sampling	1
selection_bias	1
shrna	1
signaling	1
simulation	1
single_cell	1
smad7	1
stageiii	1
stem_cells	1
study_design	1
target_discovery	1
translocation	1
ucs	1
web_server	1
wiki	1

jfr's classification [at least 200 articles] Export

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