jfr's cnv [12 articles] Export

Recent papers added to jfr's library classified by the tag cnv. You can also see everyone's cnv.

	MSB: A mean-shift-based approach for the analysis of structural variation in the genome [My Copy] Genome Research, Vol. 19, No. 1. (26 January 2009), pp. 106-117. by Lu-Yong Wang, Alexej Abyzov, Jan O. Korbel, Michael Snyder, Mark Gerstein posted to array-cgh cnv segmentation by jfr on 2009-06-24 11:22:35 as along with 5 people jandot jonilaserson sameersoi rdiaz operon
	Extensive genomic copy number variation in embryonic stem cells [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 45. (11 November 2008), pp. 17453-17456. by Qi Liang, Nathalie Conte, William C. Skarnes, Allan Bradley posted to cnv copy-number stem_cell by jfr on 2009-03-24 15:18:44 as along with 2 people rdiaz pkonings
	Reverse engineering the genotype\|[ndash]\|phenotype map with natural genetic variation [My Copy] Nature, Vol. 456, No. 7223. (10 December 2008), pp. 738-744. by Matthew V. Rockman posted to cnv genotyping qtl by jfr on 2009-03-12 15:04:26 as along with 15 people and 1 group gdb carlk Keywan TRHvidsten roys Zephyrus mjoach sg45653 natstreet druvus sriesenfeld lp2 pkonings stringertheory djkt Roswell Cancer Crosstalk
	CNVDetector: locating copy number variations using array CGH data [My Copy] Bioinformatics, Vol. 24, No. 23. (1 December 2008), pp. 2773-2775. by Peng-An Chen, Hsiao-Fei Liu, Kun-Mao Chao posted to cnv copy-number software by jfr on 2009-02-18 13:17:40 as along with 4 people pkonings dswan rdiaz nuin
	Mapping and sequencing of structural variation from eight human genomes [My Copy] Nature, Vol. 453, No. 7191. (01 May 2008), pp. 56-64. by Jeffrey M. Kidd, Gregory M. Cooper, William F. Donahue, et al.Hillary S. Hayden, Nick Sampas, Tina Graves, Nancy Hansen, Brian Teague, Can Alkan, Francesca Antonacci, Eric Haugen, Troy Zerr, N. Alice Yamada, Peter Tsang, Tera L. Newman, Eray Tuzun, Ze Cheng, Heather M. Ebling, Nadeem Tusneem, Robert David, Will Gillett, Karen A. Phelps, Molly Weaver, David Saranga, Adrianne Brand, Wei Tao, Erik Gustafson, Kevin McKernan, Lin Chen, Maika Malig, Joshua D. Smith, Joshua M. Korn, Steven A. McCarroll, David A. Altshuler, Daniel A. Peiffer, Michael Dorschner, John Stamatoyannopoulos, David Schwartz, Deborah A. Nickerson, James C. Mullikin, Richard K. Wilson, Laurakay Bruhn, Maynard V. Olson, Rajinder Kaul, Douglas R. Smith, Evan E. Eichler posted to cnv genomics sequencing by jfr on 2008-09-15 12:27:13 as along with 34 people and 2 groups n00c daed fstrozzi sameersoi jonilaserson ilyashl rdiaz dakelley xingxu alweber APRegier Annab smiddha daforerog vkwn frohike waszak matthewsuderman hpaces Ema bpb dchughes djkt balicea shikin psique kintoki kaniko aprasad vplagnol maximilianh chrisamiller guhjy skoch3 GeneGo Koch_Lab
	wuHMM: a robust algorithm to detect DNA copy number variation using long oligonucleotide microarray data. [My Copy] Nucleic acids research, Vol. 36, No. 7. (April 2008) by P. Cahan, L. E. Godfrey, P. S. Eis, et al.T. A. Richmond, R. R. Selzer, M. Brent, H. L. McLeod, T. J. Ley, T. A. Graubert posted to array-cgh cnv copy-number methodology by jfr on 2008-06-27 17:08:57 as along with 1 person rdiaz
	A genome-wide approach to identify genetic variants that contribute to etoposide-induced cytotoxicity. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 104, No. 23. (5 June 2007), pp. 9758-9763. by R. S. Huang, S. Duan, W. K. Bleibel, et al.E. O. Kistner, W. Zhang, T. A. Clark, T. X. Chen, A. C. Schweitzer, J. E. Blume, N. J. Cox, M. E. Dolan posted to cnv exon_arrays snp-arrays treatment by jfr on 2008-06-11 09:23:54 as
	Breaking the waves: improved detection of copy number variation from microarray-based comparative genomic hybridization [My Copy] Genome Biology, Vol. 8 (25 October 2007), R228. by John C. Marioni, Natalie P. Thorne, Armand Valsesia, et al.Tomas Fitzgerald, Richard Redon, Heike Fiegler, Daniel T. Andrews, Barbara E. Stranger, Andrew G. Lynch, Emmanouil T. Dermitzakis, Nigel P. Carter, Simon Tavare, Matthew E. Hurles posted to cnv methodology software by jfr on 2008-03-17 16:12:56 as along with 4 people noushin rdiaz jlangdon sanchezbuelna
	Assessing the Significance of Conserved Genomic Aberrations Using High Resolution Genomic Microarrays [My Copy] PLoS Genetics, Vol. 3, No. 8. (1 August 2007), e143. by Mitchell Guttman, Carolyn Mies, Katarzyna Dudycz-Sulicz, et al.Sharon J. Diskin, Don A. Baldwin, Christian J. Stoeckert, Gregory R. Grant posted to cnv copy-number methodology software by jfr on 2008-02-29 11:11:50 as along with 4 people and 2 groups lwaldron rdiaz ealloza zwang Bioinformatics BioinfoCIPF
	Toward accurate high-throughput SNP genotyping in the presence of inherited copy number variation [My Copy] BMC Genomics, Vol. 8 (03 July 2007), 211. by Laura E. Macconaill, Micheala A. Aldred, Xincheng Lu, Thomas Laframboise posted to cnv genotyping snp-arrays by jfr on 2008-02-13 13:49:23 as
	Paired-End Mapping Reveals Extensive Structural Variation in the Human Genome [My Copy] Science, Vol. 318, No. 5849. (19 October 2007), pp. 420-426. by Jan O. Korbel, Alexander E. Urban, Jason P. Affourtit, et al.Brian Godwin, Fabian Grubert, Jan F. Simons, Philip M. Kim, Dean Palejev, Nicholas J. Carriero, Lei Du, Bruce E. Taillon, Zhoutao Chen, Andrea Tanzer, A. C. Eugenia Saunders, Jianxiang Chi, Fengtang Yang, Nigel P. Carter, Matthew E. Hurles, Sherman M. Weissman, Timothy T. Harkins, Mark B. Gerstein, Michael Egholm, Michael Snyder posted to cnv copy-number genomics by jfr on 2007-12-17 12:01:03 as along with 22 people and 2 groups torfinnnome jandot n00c jonilaserson jrvalcourt APRegier jessopher hpaces Zephyrus pkonings orzenil stuetz matthewsuderman dpollard dchughes AaronDarling rdiaz giovanni jlangdon annacarina07 Neeperando caseybrown Journal picks EisenLab
	Relative Impact of Nucleotide and Copy Number Variation on Gene Expression Phenotypes [My Copy] Science, Vol. 315, No. 5813. (9 February 2007), pp. 848-853. by Barbara E. Stranger, Matthew S. Forrest, Mark Dunning, et al.Catherine E. Ingle, Claude Beazley, Natalie Thorne, Richard Redon, Christine P. Bird, Anna de Grassi, Charles Lee, Chris Tyler-Smith, Nigel Carter, Stephen W. Scherer, Simon Tavare, Panagiotis Deloukas, Matthew E. Hurles, Emmanouil T. Dermitzakis posted to cnv copy-number hapmap snp by jfr on 2007-05-29 17:13:17 as along with 32 people and 5 groups biovils lp2 daveGerrard sameersoi timhubbard Zephyrus ajbattle jonilaserson ilyashl emptyhb buyske zufar koller waszak daed psique jo_davies srp33 guhjy dpollard balicea rdiaz qfwills djkt vplagnol shigepong jlangdon xingxu cisevol caseybrown frohike jandot Roswell Cancer Crosstalk Visiting Position Bioinformatics EisenLab cis-regulatory-evolution

Note: You may cite this page as: http://www.citeulike.org/user/jfr/tag/cnv

breast_cancer	458
review	330
mirna	324
classification	261
software	257
colon_cancer	224
methodology	168
gene_expression	157
copy-number	152
network	147
microarray_technology	132
integration	130
bioinformatics	121
clustering	117
feature_selection	105
meta-analysis	89
affy	82
database	79
therapy	79
mirna_target	71
crc_bib	69
array-cgh	68
gene_set_analysis	66
low_level	65
regulation	63
systems_biology	61
pathway_analysis	59
genomics	58
snp-arrays	56
subtypes	55
annotation	54
rt-pcr	53
comment	49
quality_control	47
mutations	43
metastasis	41
normalization	41
prognosis	41
estrogen	40
ffpe	39
microarray_analysis	39
cancer	37
alternative_splicing	35
deep_sequencing	35
progression	35
protein_interaction	35
proteomics	35
statistics	35
markers	34
bioconductor	33
fdr	33
methylation	32
snp	31
class_discovery	28
tamoxifen	28
mutation	27
r	27
exon_arrays	25
standards	25
jfrbib	24
microarray_protocol	23
two-color	23
experiment_design	22
mir17-92	22
brca	21
ovarian_cancer	21
co-expression	20
comparison	20
model	20
pathway	20
tfbs	20
survival_analysis	19
functional_analysis	18
p53	18
treatment	18
kras	17
platform_comparison	17
evaluation	16
illumina	16
jfrbib04-09	16
stem_cell	16
antisense	15
biomarker	15
chip-chip	15
module_detection	15
multiple_testing	15
nmf	15
technology	15
erbb	14
sequencing	14
text-mining	14
basal_subtype	13
bio_signature	13
reproducible_research	13
stageii	13
staging	13
tma	13
cnv	12
genotyping	12
lung_cancer	12
marker	12
cell_line	11
drug_discovery	11
egfr	11
gene_ontology	11
maqc	11
missing_values	11
protocol	11
rna_quality	11
gene_lists	10
genome_browser	10
loh	10
tissue_specificity	10
disease_genes	9
msi	9
probe_design	9
pten	9
segmentation	9
semantic_web	9
boutique_arrays	8
can_genes	8
control_genes	8
e2f1	8
mirna_regulation	8
personalized_medicine	8
proliferation	8
sample_size	8
tgfb	8
visualization	8
18q_loh	7
chip-seq	7
consensus_clustering	7
immunohistochemistry	7
inter-laboratory	7
lymphoma	7
myc	7
tiling_array	7
community	6
editorial	6
gene_interaction	6
graphs	6
hpc	6
leukemia	6
motif	6
non-coding	6
plos_rules	6
promoters	6
serum	6
stem	6
time-course	6
validation	6
correlation	5
gene_pairs	5
grid_computing	5
gwas	5
machine_learning	5
mir21	5
nci60	5
ontology	5
plos_primer	5
trial	5
biobank	4
cin	4
cross-platform	4
data_curation	4
go	4
grading	4
image_analysis	4
lims	4
mir34	4
mirna_cluster	4
plos_start	4
pooling	4
prioritization	4
prostate_cancer	4
radiation	4
resource	4
agilent	3
apc	3
bim	3
biomarkers	3
chemotherapy	3
chromatin	3
confounders	3
copa	3
evolution	3
functional_classification	3
hapmap	3
interaction	3
loops	3
mass_spec	3
micro_environment	3
mir192	3
open-source	3
outlier	3
pca	3
pik3ca	3
primer	3
public_data	3
roc	3
sage	3
small_molecule	3
sop	3
stability	3
stroma	3
survival	3
triple_negative	3
tutorial	3
web_services	3
wnt	3
20q	2
8q24	2
alignment	2
batch-effect	2
bcatenin	2
caching	2
cdk8	2
chemo	2
diagnostic	2
dna_damage	2
ephb	2
epigenetics	2
er-positive	2
filtering	2
gene_fusion	2
glioblastoma	2
guidelines	2
in-situ	2
letter	2
local_recurrence	2
lymphocytes	2
mage	2
meeting_report	2
mir20a	2
mir215	2
mutual_information	2
oncomine	2
ontologies	2
priors	2
projection	2
protein_microarray	2
protein_networks	2
qtl	2
read_mapping	2
recommendation	2
semi-supervised	2
serm	2
smad	2
snp_arrays	2
svm	2
sweave	2
target	2
tbfs	2
thyroid	2
translational	2
upd	2
3utr	1
aging	1
akt	1
apoptosis	1
aroma	1
asco	1
association_studies	1
au-rich	1
aurora_kinase	1
bayesian	1
beads	1
biclustering	1
bmp	1
braf	1
brain_cancer	1
cables1	1
cell_cycle	1
cervical_cancer	1
circulating_tumor_cells	1
clusterin	1
compression	1
cross-study	1
dasl	1
dcc	1
dimension_reduction	1
disease	1
distance	1
driver_genes	1
dye_bias	1
ecm	1
eno1	1
ensemble	1
ependymoma	1
er	1
erg	1
er-negative	1
est_analysis	1
estradiol	1
fgfr2	1
flow_cytometry	1
formalization	1
formats	1
funding	1
gastric_cancer	1
gene_clusters	1
gene_function_prediction	1
genetics	1
genoty	1
her2	1
hypoxia	1
il8	1
in_situ_hybridization	1
invasion	1
latent	1
luminal_subtype	1
mcm7	1
melanoma	1
met	1
meta_analysis	1
metagene	1
microrna	1
mir101	1
mir-106b-25	1
mir126	1
mir135	1
mir143	1
mir145	1
mir155	1
mir15a	1
mir16-1	1
mir199	1
mir203	1
mir449	1
mirna221	1
mirna222	1
mirna_discovery	1
mixture_models	1
modules	1
mrna-seq	1
myb	1
neural_networks	1
news	1
nomogram	1
oncogene	1
oncogene_addiction	1
p21	1
pancreatic_cancer	1
passenger_genes	1
pbc	1
permutations	1
perturbation	1
pilot_study	1
power_analysis	1
prb	1
pre-post	1
randomization	1
ranked_lists	1
rb	1
ret	1
rnai	1
rna-interference	1
sampling	1
selection_bias	1
shrna	1
signaling	1
simulation	1
single_cell	1
smad7	1
stageiii	1
stem_cells	1
study_design	1
target_discovery	1
translocation	1
ucs	1
web_server	1
wiki	1

jfr's cnv [12 articles] Export

jfr's tags