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	Definition of disease-free survival: this is my truth-show me yours. [My Copy] Annals of oncology : official journal of the European Society for Medical Oncology / ESMO, Vol. 16, No. 11. (November 2005), pp. 1719-1721. by Y. J. Chua, D. Sargent, D. Cunningham posted to survival dfs comment by jfr on 2009-11-23 16:33:04 as
	Predicting microRNA targets and functions: traps for the unwary. [My Copy] Nature methods, Vol. 6, No. 6. (June 2009), pp. 397-398. by William Ritchie, Stephane Flamant, John E. Rasko posted to mirna_target mirna comment by jfr on 2009-11-20 12:54:42 as along with 5 people and 1 group gdb giovenko guhjy tibbitts daforerog microRNA
	Cloud computing [My Copy] Bioinformatics, Vol. 25, No. 12. (15 June 2009), 1475. by Alex Bateman, Matt Wood posted to comment cloud_computing by jfr on 2009-11-13 12:09:20 as along with 23 people and 4 groups rdiaz fgibson walshtp Jingbo aan pekrau tnhh niallhaslam bertelsen apaydin barry kiekyon reyez sobolevnrm cymacs druvus acesforum thegoose mikel_egana dullhunk dswan jmeppley bmajoros structural_bioinformatics McCammon baker-group Bioinformatics
	The breast cancer somatic 'muta-ome': tackling the complexity. [My Copy] Breast cancer research : BCR, Vol. 11, No. 2. (30 March 2009), 301. by Andrew E. Teschendorff, Carlos Caldas posted to sequencing mutations copy-number comment breast_cancer by jfr on 2009-11-08 22:45:12 as
	Redefining MicroRNA Targets [My Copy] Vol. 19, No. 10. (26 May 2009), pp. 870-873. by Hervé Seitz posted to mirna_target mirna comment by jfr on 2009-11-04 10:26:58 as along with 1 person and 1 group hrogers microRNA
	Introducing molecular subtyping of breast cancer into the clinic? [My Copy] Journal of clinical oncology : official journal of the American Society of Clinical Oncology, Vol. 27, No. 8. (10 March 2009), pp. 1153-1154. by Therese Sørlie posted to subtypes comment breast_cancer by jfr on 2009-11-02 16:01:52 as along with 1 person lrust
	What would you do if you could sequence everything? [My Copy] Nature Biotechnology, Vol. 26, No. 10. (01 October 2008), pp. 1125-1133. by Avak Kahvejian, John Quackenbush, John F. Thompson posted to comment deep_sequencing genomics integration by jfr on 2009-06-11 11:26:31 as along with 19 people n00c hzoltan seb1 inesdesantiago heliopais stubrown installe Annab Borelli jbhiatt Pascalichouchou bertelsen frohike natstreet druvus reyez alexknight psique GeeSharpMinor
	Advances in Breast Cancer: Pathways to Personalized Medicine [My Copy] Clin Cancer Res, Vol. 14, No. 24. (15 December 2008), pp. 7988-7999. by Olufunmilayo I. Olopade, Tatyana A. Grushko, Rita Nanda, Dezheng Huo posted to breast_cancer comment pathway personalized_medicine review therapy by jfr on 2009-04-08 15:24:21 as along with 2 people and 1 group Zephyrus misonneh Breast Cancer Reading Club
	Towards preventive medicine. High-throughput methods from molecular biology are about to change daily clinical practice [My Copy] EMBO Reports, Vol. aop, No. current. (31 October 2008) by Hrvojka Bosnjak, Kresimir Pavelic, Sandra K. Pavelic posted to comment personalized_medicine review by jfr on 2009-04-06 15:19:29 as
	Integrative biology a strategy for systems biomedicine [My Copy] Nature Reviews Genetics, Vol. 10, No. 1., pp. 64-68. by Edison T. Liu posted to comment integration systems_biology by jfr on 2009-03-23 15:32:29 as along with 4 people raiyar guhjy pengchy reyez
	K-Ras mutations are changing practice in advanced colorectal cancer. [My Copy] Journal of the National Cancer Institute, Vol. 100, No. 23. (3 December 2008), pp. 1667-1669. by C. McNeil posted to colon_cancer comment kras mutation therapy by jfr on 2009-03-16 10:28:30 as
	Bioinformatics: alive and kicking [My Copy] Genome Biology, Vol. 9 (17 December 2008), 114. by Lincoln D. Stein posted to bioinformatics comment by jfr on 2009-03-16 10:23:24 as along with 16 people and 1 group ilyashl imaginatio VGreiff renatomilani Zephyrus idoerg Yanno dandaman klo reyez dullhunk allysonlister fgibson neils kshameer druvus Roswell Cancer Crosstalk
	Much room for improvement in deposition rates of expression microarray datasets. [My Copy] Nature methods, Vol. 5, No. 12. (December 2008), pp. 991-991. by Scott A. Ochsner, David L. Steffen, Christian J. Stoeckert, Neil J. McKenna posted to comment mage standards by jfr on 2009-03-16 10:20:23 as along with 1 person daforerog
	GENETICS. The Human Variome Project. [My Copy] Science (New York, N.Y.), Vol. 322, No. 5903. (7 November 2008), pp. 861-862. by Richard G. Cotton, Arleen D. Auerbach, Myles Axton, et al.Carol Isaacson I. Barash, Samuel F. Berkovic, Anthony J. Brookes, John Burn, Garry Cutting, Johan T. den Dunnen, Paul Flicek, Nelson Freimer, Marc S. Greenblatt, Heather J. Howard, Michael Katz, Finlay A. Macrae, Donna Maglott, Gabriela Möslein, Sue Povey, Rajkumar S. Ramesar, Carolyn S. Richards, Daniela Seminara, Timothy D. Smith, María-Jesús J. Sobrido, Jan Helge H. Solbakk, Rudolph E. Tanzi, Sean V. Tavtigian, Graham R. Taylor, Joji Utsunomiya, Michael Watson posted to comment by jfr on 2009-03-10 15:49:09 as along with 6 people burak daforerog psique reyez neils pkonings
	The conflict between complex systems and reductionism. [My Copy] JAMA : the journal of the American Medical Association, Vol. 300, No. 13. (1 October 2008), pp. 1580-1581. by H. H. Heng posted to comment by jfr on 2009-02-18 13:53:26 as along with 1 person guhjy
	Colon cancer: it's CIN or CIMP. [My Copy] Clinical cancer research : an official journal of the American Association for Cancer Research, Vol. 14, No. 19. (1 October 2008), pp. 5939-5940. by J. P. Issa posted to colon_cancer comment copy-number methylation by jfr on 2009-01-10 16:41:21 as
	A truth serum for cancer--microRNAs have major potential as cancer biomarkers. [My Copy] Cell research, Vol. 18, No. 10. (October 2008), pp. 983-984. by L. J. Chin, F. J. Slack posted to comment mirna serum by jfr on 2009-01-10 16:34:37 as along with 4 people and 1 group Zephyrus felsani valeriehilgers jsnowdon microRNA
	Breast cancer special types: why bother? [My Copy] The Journal of pathology, Vol. 216, No. 4. (December 2008), pp. 394-398. by J. S. Reis-Filho, S. R. Lakhani posted to breast_cancer comment subtypes by jfr on 2009-01-09 11:29:41 as along with 1 person Zephyrus
	Determinants of RASistance to anti-epidermal growth factor receptor agents. [My Copy] Journal of clinical oncology : official journal of the American Society of Clinical Oncology, Vol. 26, No. 10. (1 April 2008), pp. 1582-1584. by J. Baselga, N. Rosen posted to comment egfr kras therapy by jfr on 2008-11-28 14:32:07 as
	Scientific software: seeing the SNPs between us [My Copy] Nature Methods, Vol. 5, No. 10., pp. 903-908. by Steven D. Buckingham posted to comment snp software by jfr on 2008-11-24 16:33:02 as along with 2 people and 1 group Zephyrus cheyloveday Roswell Cancer Crosstalk
	CANCER: The Metastasis Cascade [My Copy] Science, Vol. 321, No. 5897. (26 September 2008), pp. 1785-1787. by Christoph A. Klein posted to comment metastasis by jfr on 2008-11-24 16:17:30 as along with 4 people and 2 groups SaraNasser rdiaz Zephyrus giovenko Roswell Cancer Crosstalk Breast Cancer Reading Club
	PROTEOMICS: Proteomics Ponders Prime Time [My Copy] Science, Vol. 321, No. 5897. (26 September 2008), pp. 1758-1761. by Robert F. Service posted to comment proteomics by jfr on 2008-11-24 16:10:29 as along with 3 people guhjy balicea renatomilani
	Data completeness[mdash]the Achilles heel of drug-target networks [My Copy] Nat Biotech, Vol. 26, No. 9. (September 2008), pp. 983-984. by Jordi Mestres, Elisabet Gregori-Puigjane, Sergi Valverde, Ricard V. Sole posted to comment network therapy by jfr on 2008-11-21 10:32:23 as along with 3 people mingzhi apocapoc ptrobajo
	GENETICS: Enhancing Gene Regulation [My Copy] Science, Vol. 321, No. 5894. (5 September 2008), pp. 1300-1301. by Gregory A. Wray, Courtney C. Babbitt posted to comment mutation regulation by jfr on 2008-11-20 09:37:00 as along with 7 people and 1 group huiminC oelemento sebastien_vigneau bpcusack Ema gracio isimpson BenosLab
	Cancer: Entangled pathways [My Copy] Nature, Vol. 455, No. 7212. (24 September 2008), pp. 479-480. by René Bernards posted to cdk8 colon_cancer comment by jfr on 2008-11-17 14:12:12 as along with 1 person renatomilani
	Big data: The future of biocuration [My Copy] Nature, Vol. 455, No. 7209. (03 September 2008), pp. 47-50. by Doug Howe, Maria Costanzo, Petra Fey, et al.Takashi Gojobori, Linda Hannick, Winston Hide, David P. Hill, Renate Kania, Mary Schaeffer, Susan St Pierre, Simon Twigger, Owen White, Seung Yon Rhee posted to comment data_curation by jfr on 2008-11-07 09:53:21 as along with 24 people and 1 group welliegirl mtaschuk applebyb shankark abhishek_tiwari kshameer barriot eesruiz daforerog allysonlister guhjy lindenb natstreet christoph_steinbeck thomaskelder druvus vobios hpiwowar amarois Zephyrus psique fgibson dullhunk neils Roswell Cancer Crosstalk
	MEDICINE: Life Cycle of Translational Research for Medical Interventions [My Copy] Science, Vol. 321, No. 5894. (5 September 2008), pp. 1298-1299. by Despina G. Contopoulos-Ioannidis, George A. Alexiou, Theodore C. Gouvias, John P. Ioannidis posted to comment translational by jfr on 2008-11-07 09:42:10 as along with 2 people shoshin kevinemamy
	Sequencing sliced ends reveals microRNA targets [My Copy] Nature Biotechnology, Vol. 26, No. 8., pp. 881-882. by Ian R. Henderson, Steven E. Jacobsen posted to comment mirna mirna_target technology by jfr on 2008-11-06 11:51:36 as
	How microRNAs choose their targets [My Copy] Nat Genet, Vol. 39, No. 10. (October 2007), pp. 1191-1192. by Ivo L. Hofacker posted to comment mirna mirna_target by jfr on 2008-11-05 14:00:20 as along with 7 people and 2 groups dchughes rdiaz ealloza Garamonfok epigenetics heliopais yavanna microRNA BioinfoCIPF
	Proteomics joins the search for microRNA targets. [My Copy] Cell, Vol. 134, No. 4. (22 August 2008), pp. 560-562. by Helge Grosshans, Witold Filipowicz posted to comment mirna by jfr on 2008-10-31 17:43:22 as along with 4 people fishtank valeriehilgers guhjy bootsy
	On the Process of Becoming a Great Scientist [My Copy] PLoS Comput Biol, Vol. 4, No. 2. (15 February 2008), e33. by Morgan C. Giddings posted to comment guidelines by jfr on 2008-09-05 13:34:59 as along with 10 people and 2 groups munzmarci monkare marekrud daforerog Zephyrus dullhunk timflutre RamuAnandakrishnan sci91078 guhjy Roswell Cancer Crosstalk Centre de Recherches Interdisciplinaires
	Highly similar noncoding genomic DNA sequences: ultraconserved, or merely widespread? [My Copy] Genome / National Research Council Canada = Génome / Conseil national de recherches Canada, Vol. 51, No. 5. (May 2008), pp. 396-397. by D. A. Hickey posted to comment genomics by jfr on 2008-09-04 14:30:46 as along with 1 person maximilianh
	Is personalized medicine finally arriving? [My Copy] Nature Biotechnology, Vol. 26, No. 5., pp. 509-517. by Malorye Allison posted to comment personalized_medicine by jfr on 2008-08-04 14:15:04 as
	Higher order structure in the cancer transcriptome and systems medicine [My Copy] Mol Syst Biol, Vol. 3 (13 March 2007) by Edison T. Liu, Thomas Lemberger posted to comment by jfr on 2008-07-31 13:52:24 as along with 1 person srp33
	A quantum leap in our knowledge of breast cancer mutations. [My Copy] Breast cancer research : BCR, Vol. 8, No. 6. (15 December 2006), 304. by C. Caldas, P. A. Edwards posted to can_genes comment mutations by jfr on 2008-07-28 11:31:55 as along with 1 person ipark-kaist
	The need for standards, not guidelines, in biological data reporting and sharing. [My Copy] Nature biotechnology, Vol. 24, No. 11. (November 2006), pp. 1369-1373. by Lyle D. Burgoon posted to comment standards by jfr on 2008-07-25 16:57:23 as along with 4 people and 1 group daforerog smichan mhucka raiyar steinmetzlab
	Standardizing the standards [My Copy] Molecular Systems Biology, Vol. 2 (21 February 2006) by John Quackenbush posted to comment standards by jfr on 2008-07-25 16:51:57 as along with 7 people seb1 brianb allysonlister neils fgibson dullhunk mhucka
	Are we stuck in the standards? [My Copy] Nature Biotechnology, Vol. 24, No. 11., pp. 1374-1376. by Catherine A. Ball posted to comment standards by jfr on 2008-07-25 16:22:27 as along with 4 people and 3 groups dullhunk mhucka jmuhlich dagmar SorgerLab dIEMoSIRIS compneur
	Impact of microarray data quality on genomic data submissions to the FDA [My Copy] Nature Biotechnology, Vol. 24, No. 9., pp. 1105-1107. by Felix W. Frueh posted to comment maqc microarray_technology quality_control by jfr on 2008-07-23 18:32:18 as along with 3 people and 1 group giovanni cberry giovenko GeschwindLab
	Molecular signatures predict outcomes of breast cancer. [My Copy] The New England journal of medicine, Vol. 355, No. 6. (10 August 2006), pp. 615-617. by J. A. O'Shaughnessy posted to breast_cancer classification comment comparison by jfr on 2008-07-23 10:01:32 as along with 1 person Zephyrus
	Gene-expression profiling in breast cancer. [My Copy] Lancet, Vol. 365, No. 9460. (5 2005), pp. 634-635. by T. K. Jenssen, E. Hovig posted to breast_cancer comment by jfr on 2008-07-21 18:17:43 as
	MIAME, we have a problem. [My Copy] Trends Genet (24 December 2005) by Robert Shields posted to comment microarray_technology standards by jfr on 2008-07-21 18:15:56 as along with 4 people textoris RMGraze hggr hpiwowar
	Microarrays and molecular research: noise discovery? [My Copy] Lancet, Vol. 365, No. 9458. (5 February 2005), pp. 454-455. by J. P. Ioannidis posted to comment gene_expression microarray_technology by jfr on 2008-07-21 18:13:01 as along with 1 person textoris
	Individualized care for patients with cancer - a work in progress. [My Copy] The New England journal of medicine, Vol. 351, No. 27. (30 December 2004), pp. 2865-2867. by R. C. Bast, G. N. Hortobagyi posted to breast_cancer comment rt-pcr therapy by jfr on 2008-07-21 18:11:16 as
	Getting the Noise Out of Gene Arrays [My Copy] Science, Vol. 306, No. 5696. (22 October 2004), pp. 630-631. by Eliot Marshall posted to comment gene_expression microarray_technology platform_comparison by jfr on 2008-07-21 18:07:23 as along with 1 person cmmorel
	Trawling for genes that predict response to breast cancer adjuvant therapy. [My Copy] Journal of clinical oncology : official journal of the American Society of Clinical Oncology, Vol. 22, No. 12. (15 June 2004), pp. 2267-2269. by M. Ellis, K. Ballman posted to breast_cancer comment therapy by jfr on 2008-07-21 18:04:37 as
	In the pursuit of complexity: systems medicine in cancer biology. [My Copy] Cancer cell, Vol. 9, No. 4. (April 2006), pp. 245-247. by E. T. Liu, V. A. Kuznetsov, L. D. Miller posted to comment by jfr on 2008-07-21 14:32:45 as
	Comment on "The consensus coding sequences of human breast and colorectal cancers". [My Copy] Science, Vol. 317, No. 5844. (14 September 2007) by A. F. Rubin, P. Green posted to comment by jfr on 2007-12-06 11:38:26 as
	Comment on "The Consensus Coding Sequences of Human Breast and Colorectal Cancers" [My Copy] Science, Vol. 317, No. 5844. (14 September 2007), 1500b. by Gad Getz, Holger Hofling, Jill P. Mesirov, et al.Todd R. Golub, Matthew Meyerson, Robert Tibshirani, Eric S. Lander posted to comment by jfr on 2007-12-06 11:37:40 as along with 2 people zufar stajich
	Comment on "The consensus coding sequences of human breast and colorectal cancers". [My Copy] Science, Vol. 317, No. 5844. (14 September 2007) by W. F. Forrest, G. Cavet posted to comment by jfr on 2007-12-06 11:36:43 as

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review	345
mirna	341
software	275
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colon_cancer	230
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akt	1
mir449	1
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braf	1
wiki	1

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