jfr's mirna [at least 200 articles] Export

Recent papers added to jfr's library classified by the tag mirna. You can also see everyone's mirna.

	Dissecting microregulation of a master regulatory network. [My Copy] BMC genomics, Vol. 9 (23 February 2008), 88. by A. U. Sinha, V. Kaimal, J. Chen, A. G. Jegga posted to p53 mirna_regulation mirna by jfr on 2009-11-23 16:24:07 as along with 4 people and 1 group danaiancu tonamswish guhjy pengchy microRNA
	The functions of animal microRNAs [My Copy] Nature, Vol. 431, No. 7006. (2004), pp. 350-355. by Victor Ambros posted to review mirna by jfr on 2009-11-20 13:25:16 as along with 5 people and 2 groups kmdaily dchughes Fritz skoch erbon microRNA neurolit
	Predicting microRNA targets and functions: traps for the unwary. [My Copy] Nature methods, Vol. 6, No. 6. (June 2009), pp. 397-398. by William Ritchie, Stephane Flamant, John E. Rasko posted to mirna_target mirna comment by jfr on 2009-11-20 12:54:42 as along with 5 people and 1 group gdb giovenko guhjy tibbitts daforerog microRNA
	MicroRNA-92a controls angiogenesis and functional recovery of ischemic tissues in mice. [My Copy] Science (New York, N.Y.), Vol. 324, No. 5935. (26 June 2009), pp. 1710-1713. by A. Bonauer, G. Carmona, M. Iwasaki, et al.M. Mione, M. Koyanagi, A. Fischer, J. Burchfield, H. Fox, C. Doebele, K. Ohtani, E. Chavakis, M. Potente, M. Tjwa, C. Urbich, A. M. Zeiher, S. Dimmeler posted to mirna mir17-92 by jfr on 2009-11-18 13:10:02 as along with 6 people and 2 groups tonamswish guhjy galka8_diploma ppgardne lymxz valeriehilgers microRNA Journal picks
	MicroRNAs: Novel regulators in the hallmarks of human cancer [My Copy] Cancer Letters (22 May 2009) by Kai Ruan, Xiaoguang Fang, Gaoliang Ouyang posted to review mirna cancer_hallmarks by jfr on 2009-11-17 14:42:12 as along with 2 people and 1 group zufar guhjy microRNA
	DIANA-mirPath: Integrating human and mouse microRNAs in pathways. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 15. (1 August 2009), pp. 1991-1993. by G. L. Papadopoulos, P. Alexiou, M. Maragkakis, M. Reczko, A. G. Hatzigeorgiou posted to pathway mirna_target mirna database by jfr on 2009-11-16 13:15:44 as along with 8 people and 3 groups ealloza megraw Stew dswan daforerog tmmurali guhjy pengchy microRNA Bioinformatics - CRUK Bioinformatics
	Correlation of expression profiles between microRNAs and mRNA targets using NCI-60 data [My Copy] BMC Genomics, Vol. 10, No. 1. (2009), 218. by Yu P. Wang, Kuo B. Li posted to nci60 mirna_target mirna by jfr on 2009-11-15 14:54:36 as along with 12 people and 2 groups frohike guhjy giovenko marti lwaldron daforerog samgj shikin ealloza dswan natstreet Stew microRNA Bioinformatics - CRUK
	Intra-Platform Repeatability and Inter-Platform Comparability of MicroRNA Microarray Technology [My Copy] PLoS ONE, Vol. 4, No. 5. (14 May 2009), e5540. by Fumiaki Sato, Soken Tsuchiya, Kazuya Terasawa, Gozoh Tsujimoto posted to mirna microarray_technology maqc cross-platform by jfr on 2009-11-15 14:34:44 as along with 4 people and 1 group fishtank rdiaz guhjy daforerog microRNA
	MicroRNA signatures predict oestrogen receptor, progesterone receptor and HER2/neu receptor status in breast cancer. [My Copy] Breast cancer research : BCR, Vol. 11, No. 3. (11 May 2009), R27. by Aoife J. Lowery, Nicola Miller, Amanda Devaney, et al.Roisin E. McNeill, Pamela A. Davoren, Christophe Lemetre, Vladimir Benes, Sabine Schmidt, Jonathon Blake, Graham Ball, Michael J. Kerin posted to pr mirna her2 er breast_cancer by jfr on 2009-11-13 11:46:37 as along with 2 people and 1 group tonamswish giovenko microRNA
	MicroRNA identification in plasma and serum: a new tool to diagnose and monitor diseases [My Copy] Expert Opinion on Biological Therapy, Vol. 9, No. 6., pp. 703-711. by Maria Angelica A. Cortez, George Adrian A. Calin posted to review plasma mirna by jfr on 2009-11-13 11:43:46 as along with 1 group microRNA
	A single-molecule method for the quantitation of microRNA gene expression [My Copy] Nature Methods, Vol. 3, No. 1. (20 December 2005), pp. 41-46. by Lori A. Neely, Sonal Patel, Joanne Garver, et al.Michael Gallo, Maria Hackett, Stephen McLaughlin, Mark Nadel, John Harris, Steve Gullans, Jenny Rooke posted to mirna microarray_technology by jfr on 2009-11-09 14:49:46 as along with 2 people and 1 group fishtank Vincent_Rouilly microRNA
	High-throughput stem-loop RT-qPCR miRNA expression profiling using minute amounts of input RNA. [My Copy] Nucleic acids research, Vol. 36, No. 21. (21 December 2008) by P. Mestdagh, T. Feys, N. Bernard, et al.S. Guenther, C. Chen, F. Speleman, J. Vandesompele posted to technology rt-pcr mirna by jfr on 2009-11-09 14:45:52 as along with 2 people and 1 group natstreet martin-novak microRNA
	Allelic imbalance sequencing reveals that single-nucleotide polymorphisms frequently alter microRNA-directed repression [My Copy] Nature Biotechnology, Vol. 27, No. 5. (26 April 2009), pp. 472-477. by Jinkuk Kim, David P. Bartel posted to snp mirna_regulation mirna by jfr on 2009-11-08 23:34:07 as along with 7 people and 1 group guhjy fenghezi giovanni jbhiatt daforerog samgj valeriehilgers microRNA
	Prediction of guide strand of microRNAs from its sequence and secondary structure [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (09 April 2009), 105. by Firoz Ahmed, Hifzur Ansari, Gajendra Raghava posted to mirna by jfr on 2009-11-08 22:58:14 as along with 4 people and 1 group heliopais homonecloco raventhorn86 samgj microRNA
	Small RNA: A Large Contributor to Carcinogenesis? [My Copy] Journal of Gastrointestinal Surgery, Vol. 13, No. 7. (1 July 2009), pp. 1379-1388. by Imran Bhatti, Andrew Lee, Jonathan Lund, Michael Larvin posted to review mirna by jfr on 2009-11-08 22:14:40 as along with 1 person and 1 group guhjy microRNA
	dbSMR: a novel resource of genome-wide SNPs affecting microRNA mediated regulation [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 108. by Manoj Hariharan, Vinod Scaria, Samir Brahmachari posted to snp mirna_regulation mirna database by jfr on 2009-11-08 22:08:30 as along with 7 people and 1 group heliopais songpku guhjy pengchy daforerog lwaldron ealloza microRNA
	Redefining MicroRNA Targets [My Copy] Vol. 19, No. 10. (26 May 2009), pp. 870-873. by Hervé Seitz posted to mirna_target mirna comment by jfr on 2009-11-04 10:26:58 as along with 1 person and 1 group hrogers microRNA
	Evidence for Antisense Transcription Associated with MicroRNA Target mRNAs in Arabidopsis [My Copy] PLoS Genet, Vol. 5, No. 4. (17 April 2009), e1000457. by Qing-Jun Luo, Manoj P. Samanta, Fatih Köksal, et al.Jaroslav Janda, David W. Galbraith, Casey R. Richardson, Fangqian Ou-Yang, Christopher D. Rock posted to mirna_target mirna antisense by jfr on 2009-11-04 10:19:32 as along with 2 people and 1 group gdb pengchy microRNA
	Human microRNAs co-silence in well-separated groups and have different predicted essentialities. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 8. (15 April 2009), pp. 1063-1069. by Gábor Boross, Katalin Orosz, Illés J. Farkas posted to mirna by jfr on 2009-11-02 17:23:03 as along with 6 people and 2 groups heliopais samgj shikin ealloza daforerog valeriehilgers microRNA BenosLab
	microPred: effective classification of pre-miRNAs for human miRNA gene prediction. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 8. (15 April 2009), pp. 989-995. by Rukshan Batuwita, Vasile Palade posted to mirna by jfr on 2009-11-02 17:19:54 as along with 5 people and 2 groups guhjy neils lwaldron djkt daforerog microRNA Bioinformatics
	New class of microRNA targets containing simultaneous 5'-UTR and 3'-UTR interaction sites. [My Copy] Genome research, Vol. 19, No. 7. (31 July 2009), pp. 1175-1183. by Inhan Lee, Subramanian S. Ajay, Jong In I. Yook, et al.Hyun Sil S. Kim, Su Hyung H. Hong, Nam Hee H. Kim, Saravana M. Dhanasekaran, Arul M. Chinnaiyan, Brian D. Athey posted to mirna_target mirna by jfr on 2009-11-02 17:01:43 as along with 16 people and 5 groups danaiancu hzoltan ebcgantman ashkelon13 heliopais megraw fenghezi fpattyn tmmurali ppgardne tonamswish stajich Einat daforerog valeriehilgers ealloza Neuroblastoma Journal picks microRNA Mycology cube_and_beyond
	Correlation of microRNA levels during hypoxia with predicted target mRNAs through genome-wide microarray analysis. [My Copy] BMC medical genomics, Vol. 2, No. 1. (2009), 15. by Jennifer S. Guimbellot, Stephen W. Erickson, Tapan Mehta, et al.Hui Wen, Grier P. Page, Eric J. Sorscher, Jeong S. Hong posted to mirna_target mirna integration hypoxia gene_expression by jfr on 2009-11-02 16:29:49 as along with 1 person pengchy
	Prediction of novel microRNA genes in cancer-associated genomic regions--a combined computational and experimental approach. [My Copy] Nucleic acids research, Vol. 37, No. 10. (1 June 2009), pp. 3276-3287. by Anastasis Oulas, Alexandra Boutla, Katerina Gkirtzou, Martin Reczko, Kriton Kalantidis, Panayiota Poirazi posted to mirna_discovery mirna copy-number by jfr on 2009-11-02 16:15:02 as along with 6 people and 2 groups ppgardne ashishanand nuin samgj daforerog tonamswish Journal picks microRNA
	MicroRNAs preferentially target the genes with high transcriptional regulation complexity. [My Copy] Biochemical and biophysical research communications, Vol. 352, No. 3. (19 January 2007), pp. 733-738. by Qinghua Cui, Zhenbao Yu, Youlian Pan, Enrico O. Purisima, Edwin Wang posted to mirna_target mirna by jfr on 2009-11-02 15:56:44 as along with 12 people and 6 groups danaiancu epinatel mtagaya daforerog eckart_bindewald tardigrade dchughes cdawson cursonivel1 heliopais maralena natstreet cube_and_beyond microRNA G4ID GIG Genetics-of-Gambling cursonivel1
	Combinatorial microRNAs: working together to make a difference. [My Copy] Cell cycle (Georgetown, Tex.), Vol. 7, No. 20. (4 October 2008), pp. 3137-3142. by Irena Ivanovska, Michele A. Cleary posted to review mirna by jfr on 2009-11-02 15:51:56 as along with 2 people samgj pengchy
	MicroRNA detection and target prediction: integration of computational and experimental approaches. [My Copy] DNA and cell biology, Vol. 26, No. 5. (May 2007), pp. 321-337. by Keya Chaudhuri, Raghunath Chatterjee posted to review mirna_target mirna by jfr on 2009-11-02 15:49:02 as along with 3 people and 1 group heliopais mfabbri maralena microRNA
	Bio-informatic trends for the determination of miRNA-target interactions in mammals. [My Copy] DNA and cell biology, Vol. 26, No. 5. (May 2007), pp. 353-360. by Jonathon Doran, William M. Strauss posted to software review mirna_target mirna by jfr on 2009-11-02 15:46:32 as along with 2 people and 1 group mtagaya maralena microRNA
	Bayesian inference of MicroRNA targets from sequence and expression data. [My Copy] Journal of computational biology : a journal of computational molecular cell biology, Vol. 14, No. 5. (June 2007), pp. 550-563. by Jim C. Huang, Quaid D. Morris, Brendan J. Frey posted to mirna_target mirna by jfr on 2009-11-02 15:42:57 as along with 4 people and 1 group qfwills andersbj heliopais megraw microRNA
	A bioinformatics tool for linking gene expression profiling results with public databases of microRNA target predictions. [My Copy] RNA (New York, N.Y.), Vol. 14, No. 11. (23 November 2008), pp. 2290-2296. by Chad J. Creighton, Ankur K. Nagaraja, Samir M. Hanash, Martin M. Matzuk, Preethi H. Gunaratne posted to software mirna_target mirna integration gene_expression by jfr on 2009-11-02 15:40:31 as along with 8 people and 1 group valeriehilgers ealloza guhjy giovenko Stew druvus pengchy bootsy microRNA database
	MicroRNomics: a newly emerging approach for disease biology. [My Copy] Physiological genomics, Vol. 33, No. 2. (22 April 2008), pp. 139-147. by Chunxiang Zhang posted to review mirna by jfr on 2009-11-02 15:14:09 as along with 2 people and 1 group yyby guhjy microRNA
	A computational screen for mouse signaling pathways targeted by microRNA clusters. [My Copy] RNA (New York, N.Y.), Vol. 14, No. 7. (29 July 2008), pp. 1276-1283. by Jianzhen Xu, Chiwai Wong posted to mirna_target mirna_cluster mirna by jfr on 2009-11-02 15:12:20 as along with 7 people and 1 group heliopais coela guhjy bootsy mtagaya maralena daforerog microRNA
	miRDB: a microRNA target prediction and functional annotation database with a wiki interface. [My Copy] RNA (New York, N.Y.), Vol. 14, No. 6. (21 June 2008), pp. 1012-1017. by Xiaowei Wang posted to wiki mirna_target mirna database by jfr on 2009-11-02 15:10:32 as along with 5 people and 1 group heliopais daforerog valeriehilgers guhjy bootsy microRNA
	Copy number abnormalities, MYC activity, and the genetic fingerprint of normal B cells mechanistically define the microRNA profile of diffuse large B-cell lymphoma. [My Copy] Blood, Vol. 113, No. 26. (25 June 2009), pp. 6681-6690. by Cheng Li, Sang-Woo W. Kim, Deepak Rai, et al.Aswani R. Bolla, Siddharth Adhvaryu, Marsha C. Kinney, Ryan S. Robetorye, Ricardo C. Aguiar posted to myc mirna lymphoma gene_expression copy-number by jfr on 2009-09-30 10:02:33 as along with 1 group microRNA
	Functional links between clustered microRNAs: suppression of cell-cycle inhibitors by microRNA clusters in gastric cancer [My Copy] Nucl. Acids Res., Vol. 37, No. 5. (1 April 2009), pp. 1672-1681. by Young-Kook Kim, Jieun Yu, Tae S. Han, et al.Seong-Yeon Park, Bumjin Namkoong, Dong H. Kim, Keun Hur, Moon-Won Yoo, Hyuk-Joon Lee, Han-Kwang Yang, V. Narry Kim posted to mirna_cluster mirna gastric_cancer by jfr on 2009-09-30 10:00:08 as along with 4 people and 1 group cyanth ealloza pengchy samgj microRNA
	Global gene expression analysis reveals reduced abundance of putative microRNA targets in human prostate tumours. [My Copy] BMC genomics, Vol. 10, No. 1. (26 February 2009), 93. by Ruping Sun, Xuping Fu, Yao Li, Yi Xie, Yumin Mao posted to prostate_cancer mirna_target mirna gene_expression by jfr on 2009-09-30 09:57:51 as along with 5 people and 1 group mkiyer heliopais natstreet provero neils microRNA
	Targeted deletion reveals essential and overlapping functions of the miR-17 through 92 family of miRNA clusters. [My Copy] Cell, Vol. 132, No. 5. (7 March 2008), pp. 875-886. by A. Ventura, A. G. Young, M. M. Winslow, et al.L. Lintault, A. Meissner, S. J. Erkeland, J. Newman, R. T. Bronson, D. Crowley, J. R. Stone, R. Jaenisch, P. A. Sharp, T. Jacks posted to mir17-92 mirna by jfr on 2009-07-22 16:28:43 as along with 5 people and 1 group danaiancu valeriehilgers heliopais maralena andreaventura microRNA
	The miR-106b-25 polycistron, activated by genomic amplification, functions as an oncogene by suppressing p21 and Bim. [My Copy] Gastroenterology, Vol. 136, No. 5. (May 2009), pp. 1689-1700. by T. Kan, F. Sato, T. Ito, et al.N. Matsumura, S. David, Y. Cheng, R. Agarwal, B. C. Paun, Z. Jin, A. V. Olaru, F. M. Selaru, J. P. Hamilton, J. Yang, J. M. Abraham, Y. Mori, S. J. Meltzer posted to bim copy-number mcm7 mir-106b-25 mirna p21 by jfr on 2009-07-22 14:31:23 as along with 1 group microRNA
	CORNA: testing gene lists for regulation by microRNAs [My Copy] Bioinformatics, Vol. 25, No. 6. (15 March 2009), pp. 832-833. by X. Wu, M. Watson posted to gene_expression mirna mirna_target r software by jfr on 2009-07-17 16:00:29 as along with 10 people and 2 groups VR lwaldron guhjy Stew djkt nuin imina natstreet druvus mhamada microRNA Bioinformatics - CRUK
	Many roads to maturity: microRNA biogenesis pathways and their regulation [My Copy] Nature Cell Biology, Vol. 11, No. 3. (01 March 2009), pp. 228-234. by Julia Winter, Stephanie Jung, Sarina Keller, Richard I. Gregory, Sven Diederichs posted to mirna review by jfr on 2009-07-17 15:47:20 as along with 9 people and 1 group fishtank gdb daforerog guhjy tonamswish valeriehilgers dchughes heliopais megraw microRNA
	MicroRNAs--the micro steering wheel of tumour metastases. [My Copy] Nature reviews. Cancer, Vol. 9, No. 4. (5 April 2009), pp. 293-302. by Milena S. Nicoloso, Riccardo Spizzo, Masayoshi Shimizu, Simona Rossi, George A. Calin posted to metastasis mirna review by jfr on 2009-07-17 15:44:51 as along with 6 people and 1 group guhjy reyez tonamswish giovenko provero valeriehilgers microRNA
	A study of microRNAs in silico and in vivo: bioinformatics approaches to microRNA discovery and target identification. [My Copy] The FEBS journal, Vol. 276, No. 8. (25 April 2009), pp. 2150-2156. by Malik Yousef, Louise Showe, Michael Showe posted to mirna mirna_target review by jfr on 2009-07-03 17:03:28 as along with 3 people and 1 group pablocarb guhjy hrogers microRNA
	A study of microRNAs in silico and in vivo: diagnostic and therapeutic applications in cancer. [My Copy] The FEBS journal, Vol. 276, No. 8. (April 2009), pp. 2157-2164. by Scott A. Waldman, Andre Terzic posted to mirna review by jfr on 2009-07-03 17:00:23 as along with 1 person and 1 group guhjy microRNA
	Identification of miR-21 targets in breast cancer cells using a quantitative proteomic approach. [My Copy] Proteomics, Vol. 9, No. 5. (March 2009), pp. 1374-1384. by Y. Yang, R. Chaerkady, M. A. Beer, J. T. Mendell, A. Pandey posted to breast_cancer mir21 mirna mirna_target proteomics by jfr on 2009-07-01 15:21:09 as along with 1 person and 1 group gbloeb microRNA
	The role of microRNAs in gastrointestinal cancers. [My Copy] Journal of gastroenterology, Vol. 44 Suppl 19, No. 0. (1 January 2009), pp. 18-22. by Y. Saito, H. Suzuki, T. Hibi posted to colon_cancer mirna review by jfr on 2009-07-01 14:49:07 as along with 1 person and 1 group valeriehilgers microRNA
	Primary microRNA transcripts are processed co-transcriptionally. [My Copy] Nature structural & molecular biology, Vol. 15, No. 9. (September 2008), pp. 902-909. by M. Morlando, M. Ballarino, N. Gromak, F. Pagano, I. Bozzoni, N. J. Proudfoot posted to mirna by jfr on 2009-06-30 17:13:29 as along with 2 people and 1 group valeriehilgers daforerog microRNA
	Predicting microRNA targets in time-series microarray experiments via functional data analysis. [My Copy] BMC bioinformatics, Vol. 10 Suppl 1, No. Suppl 1. (2009), S32. by B. J. Parker, J. Wen posted to mirna mirna_target time-course by jfr on 2009-06-30 17:03:53 as along with 1 person and 1 group heliopais microRNA
	Computational identification of condition-specific miRNA targets based on gene expression profiles and sequence information. [My Copy] BMC bioinformatics, Vol. 10 Suppl 1 (2009) by J. G. Joung, Z. Fei posted to mirna mirna_target by jfr on 2009-06-30 16:59:10 as along with 2 people and 1 group guhjy provero microRNA
	HHMMiR: efficient de novo prediction of microRNAs using hierarchical hidden Markov models. [My Copy] BMC bioinformatics, Vol. 10 Suppl 1 (2009) by S. Kadri, V. Hinman, P. V. Benos posted to mirna mirna_target software by jfr on 2009-06-25 15:58:21 as along with 1 group microRNA
	Microarray-based approach identifies microRNAs and their target functional patterns in polycystic kidney disease. [My Copy] BMC genomics, Vol. 9 (23 December 2008), 624. by P. Pandey, B. Brors, P. K. Srivastava, et al.A. Bott, S. N. Boehn, H. J. Groene, N. Gretz posted to gene_expression integration mirna by jfr on 2009-06-25 13:05:33 as along with 2 people and 1 group roboonya heliopais microRNA
	MiRTif: a support vector machine-based microRNA target interaction filter [My Copy] BMC Bioinformatics, Vol. 9, No. Suppl 12. (2008) by Yuchen Yang, Yu P. Wang, Kuo B. Li posted to mirna mirna_target software by jfr on 2009-06-24 11:25:03 as along with 3 people and 1 group heliopais guhjy pengchy microRNA

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breast_cancer	469
review	341
mirna	334
software	272
classification	269
colon_cancer	227
gene_expression	169
methodology	169
copy-number	155
network	148
integration	133
microarray_technology	133
bioinformatics	121
clustering	119
feature_selection	105
meta-analysis	94
affy	85
database	81
therapy	80
mirna_target	74
array-cgh	69
crc_bib	69
gene_set_analysis	67
low_level	66
regulation	66
systems_biology	63
pathway_analysis	60
rt-pcr	60
genomics	59
subtypes	57
annotation	56
snp-arrays	56
comment	52
quality_control	48
normalization	44
metastasis	43
mutations	43
ffpe	41
prognosis	41
deep_sequencing	40
estrogen	40
microarray_analysis	40
proteomics	38
bioconductor	37
cancer	37
statistics	37
alternative_splicing	35
progression	35
protein_interaction	35
fdr	34
markers	34
methylation	32
snp	32
class_discovery	28
r	28
tamoxifen	28
mutation	27
standards	27
exon_arrays	25
jfrbib	24
microarray_protocol	23
mir17-92	23
two-color	23
experiment_design	22
pathway	22
brca	21
co-expression	21
comparison	21
ovarian_cancer	21
model	20
survival_analysis	20
tfbs	20
p53	19
treatment	19
functional_analysis	18
kras	18
platform_comparison	18
chip-chip	16
evaluation	16
illumina	16
jfrbib04-09	16
multiple_testing	16
stem_cell	16
technology	16
antisense	15
biomarker	15
module_detection	15
nmf	15
text-mining	15
basal_subtype	14
erbb	14
sequencing	14
bio_signature	13
reproducible_research	13
rna_quality	13
stageii	13
staging	13
tma	13
cnv	12
egfr	12
gene_ontology	12
genotyping	12
lung_cancer	12
maqc	12
marker	12
cell_line	11
drug_discovery	11
loh	11
missing_values	11
proliferation	11
protocol	11
semantic_web	11
control_genes	10
disease_genes	10
gene_lists	10
genome_browser	10
pten	10
tissue_specificity	10
visualization	10
immunohistochemistry	9
mirna_regulation	9
msi	9
probe_design	9
segmentation	9
boutique_arrays	8
can_genes	8
chip-seq	8
consensus_clustering	8
e2f1	8
inter-laboratory	8
personalized_medicine	8
sample_size	8
tgfb	8
time-course	8
18q_loh	7
lymphoma	7
myc	7
tiling_array	7
validation	7
community	6
correlation	6
editorial	6
gene_interaction	6
graphs	6
hpc	6
leukemia	6
motif	6
nci60	6
non-coding	6
ontology	6
plos_rules	6
promoters	6
read_mapping	6
serum	6
stem	6
chemotherapy	5
cin	5
cross-platform	5
functional_genomics	5
gene_pairs	5
grid_computing	5
gwas	5
her2	5
machine_learning	5
mir21	5
plos_primer	5
plos_start	5
radiation	5
trial	5
biobank	4
data_curation	4
er	4
go	4
grading	4
image_analysis	4
lims	4
mir34	4
mirna_cluster	4
pooling	4
prioritization	4
prostate_cancer	4
public_data	4
resource	4
survival	4
web_services	4
agilent	3
apc	3
bim	3
biomarkers	3
chromatin	3
confounders	3
copa	3
evolution	3
functional_classification	3
glioblastoma	3
hapmap	3
interaction	3
loops	3
mage	3
mass_spec	3
micro_environment	3
mir192	3
ontologies	3
open-source	3
outlier	3
pca	3
pik3ca	3
pr	3
primer	3
roc	3
sage	3
small_molecule	3
sop	3
stability	3
stroma	3
triple_negative	3
tutorial	3
wnt	3
20q	2
8q24	2
alignment	2
batch-effect	2
bcatenin	2
caching	2
cdk8	2
cell_cycle	2
cetuximab	2
chemo	2
diagnostic	2
dna_damage	2
ephb	2
epigenetics	2
er-positive	2
filtering	2
flow_cytometry	2
gene_fusion	2
guidelines	2
in-situ	2
letter	2
local_recurrence	2
luminal_subtype	2
lymphocytes	2
meeting_report	2
mir20a	2
mir215	2
mutual_information	2
oncomine	2
permutations	2
priors	2
projection	2
protein_microarray	2
protein_networks	2
qtl	2
recommendation	2
rin	2
semi-supervised	2
serm	2
smad	2
snp_arrays	2
svm	2
sweave	2
target	2
tbfs	2
thyroid	2
translational	2
upd	2
web_resource	2
web_server	2
3utr	1
454	1
aging	1
akt	1
apoptosis	1
aroma	1
asco	1
association_studies	1
au-rich	1
aurora_kinase	1
bayesian	1
beads	1
biclustering	1
bmp	1
braf	1
brain_cancer	1
cables1	1
cancer_hallmarks	1
cervical_cancer	1
circulating_tumor_cells	1
cloud_computing	1
clusterin	1
compression	1
concordance	1
cross-species	1
cross-study	1
dasl	1
dcc	1
dfs	1
dimension_reduction	1
disease	1
distance	1
driver_genes	1
dye_bias	1
early-stage	1
ecm	1
eno1	1
ensemble	1
ependymoma	1
erg	1
er-negative	1
est_analysis	1
estradiol	1
fantom	1
fgfr2	1
fish	1
formalization	1
formats	1
funding	1
gastric_cancer	1
gene_clusters	1
gene_function_prediction	1
gene_networks	1
genetics	1
genome_assembly	1
genoty	1
graph_approach	1
hypoxia	1
il8	1
in_situ_hybridization	1
invasion	1
latent	1
latex	1
low-level	1
markup	1
mcm7	1
melanoma	1
met	1
meta_analysis	1
metagene	1
microrna	1
mir101	1
mir-106b-25	1
mir126	1
mir135	1
mir143	1
mir145	1
mir155	1
mir15a	1
mir16-1	1
mir199	1
mir203	1
mir449	1
mirna221	1
mirna222	1
mirna_discovery	1
mixture_models	1
model-based	1
modules	1
mrna-seq	1
myb	1
neural_networks	1
news	1
ngs	1
nomogram	1
oncogene	1
oncogene_addiction	1
p21	1
pancreatic_cancer	1
passenger_genes	1
pbc	1
perturbation	1
pilot_study	1
plasma	1
power_analysis	1
prb	1
pre-post	1
python	1
randomization	1
ranked_lists	1
rb	1
ret	1
rnai	1
rna-interference	1
sampling	1
selection_bias	1
shrna	1
signaling	1
simulation	1
single_cell	1
smad7	1
stageiii	1
stem_cells	1
study_design	1
target_discovery	1
taxane	1
tcga	1
tissue_origin	1
translation	1
translocation	1
ucs	1
wiki	1

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