jfr's protein_interaction [35 articles] Export

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	Information flow analysis of interactome networks. [My Copy] PLoS computational biology, Vol. 5, No. 4. (10 April 2009), e1000350. by Patrycja Vasilyev V. Missiuro, Kesheng Liu, Lihua Zou, et al.Brian C. Ross, Guoyan Zhao, Jun S. Liu, Hui Ge posted to protein_interaction network by jfr on 2009-11-08 22:37:00 as along with 19 people and 1 group lptolik freesci flbarroso peteruetz phoenixzxl robfsouza reyez VGreiff colmryan sobolevnrm hryk shikin dswan fgibson coela ddahlem mstumpf zwang friendpine baker-group
	Identifying functional modules using expression profiles and confidence-scored protein interactions [My Copy] Bioinformatics, Vol. 25, No. 9. (1 May 2009), pp. 1158-1164. by Igor Ulitsky, Ron Shamir posted to protein_interaction network module_detection integration gene_expression by jfr on 2009-11-03 17:23:37 as along with 4 people yaredo saket tmmurali phoenixzxl
	Disease candidate gene identification and prioritization using protein interaction networks [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 73. by Jing Chen, Bruce Aronow, Anil Jegga posted to disease_genes network prioritization protein_interaction by jfr on 2009-07-09 12:34:30 as along with 13 people and 1 group karthikraman carlk zufar guhjy daforerog saket provero mitko neils barriot grahamc renatomilani rjazwiec Bioinformatics
	Topological properties of protein interaction networks from a structural perspective. [My Copy] Biochemical Society transactions, Vol. 36, No. Pt 6. (December 2008), pp. 1398-1403. by A. Gursoy, O. Keskin, R. Nussinov posted to network protein_interaction by jfr on 2009-03-23 16:28:42 as along with 2 people chica higueruelo
	An empirical framework for binary interactome mapping. [My Copy] Nature methods, Vol. 6, No. 1. (07 January 2009), pp. 83-90. by Kavitha Venkatesan, Jean-François F. Rual, Alexei Vazquez, et al.Ulrich Stelzl, Irma Lemmens, Tomoko Hirozane-Kishikawa, Tong Hao, Martina Zenkner, Xiaofeng Xin, Kwang-Il I. Goh, Muhammed A. Yildirim, Nicolas Simonis, Kathrin Heinzmann, Fana Gebreab, Julie M. Sahalie, Sebiha Cevik, Christophe Simon, Anne-Sophie S. de Smet, Elizabeth Dann, Alex Smolyar, Arunachalam Vinayagam, Haiyuan Yu, David Szeto, Heather Borick, Amélie Dricot, Niels Klitgord, Ryan R. Murray, Chenwei Lin, Maciej Lalowski, Jan Timm, Kirstin Rau, Charles Boone, Pascal Braun, Michael E. Cusick, Frederick P. Roth, David E. Hill, Jan Tavernier, Erich E. Wanker, Albert-László L. Barabási, Marc Vidal posted to network protein_interaction by jfr on 2009-03-18 15:30:17 as along with 4 people chica lawraga lp2 guhjy
	Physical protein-protein interactions predicted from microarrays [My Copy] Bioinformatics, Vol. 24, No. 22. (15 November 2008), pp. 2608-2614. by Ta-tsen Soong, Kazimierz O. Wrzeszczynski, Burkhard Rost posted to protein_interaction by jfr on 2009-01-29 12:06:48 as along with 12 people jperkins kiekyon cgaugain guhjy saket iris_2001 pengchy natstreet grahamc phoenixzxl neils renatomilani
	NetGrep: fast network schema searches in interactomes [My Copy] Genome Biology, Vol. 9, No. 9. (2008) by Eric Banks, Elena Nabieva, Ryan Peterson, Mona Singh posted to network protein_interaction software by jfr on 2009-01-10 11:02:36 as along with 3 people guhjy barriot neils
	High-Quality Binary Protein Interaction Map of the Yeast Interactome Network [My Copy] Science, Vol. 322, No. 5898. (3 October 2008), pp. 104-110. by Haiyuan Yu, Pascal Braun, Muhammed A. Yildirim, et al.Irma Lemmens, Kavitha Venkatesan, Julie Sahalie, Tomoko Hirozane-Kishikawa, Fana Gebreab, Na Li, Nicolas Simonis, Tong Hao, Jean-Francois Rual, Amelie Dricot, Alexei Vazquez, Ryan R. Murray, Christophe Simon, Leah Tardivo, Stanley Tam, Nenad Svrzikapa, Changyu Fan, Anne-Sophie de Smet, Adriana Motyl, Michael E. Hudson, Juyong Park, Xiaofeng Xin, Michael E. Cusick, Troy Moore, Charlie Boone, Michael Snyder, Frederick P. Roth, Albert-Laszlo Barabasi, Jan Tavernier, David E. Hill, Marc Vidal posted to network protein_interaction by jfr on 2008-11-24 16:46:32 as along with 27 people and 1 group aceol mgomes nzm pauldobson cabbagezs mariap3636 semin roys phoenixzxl kintoki jbhiatt elenaz ocs cerca ptrobajo carlk zwang gracio reyez mdperry dullhunk Petersarkies grahamc yeastyboy guhjy maralena neils BenosLab
	MicroRNA regulation of human protein–protein interaction network [My Copy] RNA, Vol. 13, No. 9. (24 September 2007), pp. 1402-1408. by Han Liang, Wen-Hsiung Li posted to mirna network protein_interaction by jfr on 2008-11-05 13:04:44 as along with 7 people and 1 group tonamswish daforerog andersbj fij cabbagezs maralena heliopais microRNA
	Why Do Hubs in the Yeast Protein Interaction Network Tend To Be Essential: Reexamining the Connection between the Network Topology and Essentiality [My Copy] PLoS Comput Biol, Vol. 4, No. 8. (1 August 2008), e1000140. by Elena Zotenko, Julian Mestre, Dianne P. O'Leary, Teresa M. Przytycka posted to community network protein_interaction by jfr on 2008-10-13 17:11:55 as along with 12 people and 1 group lawraga marti chrisamiller kaarsinogen aramata jmjimenez srp33 maralena cabbagesofdoom shikin cerca tmmurali GeneGo
	Probing the Extent of Randomness in Protein Interaction Networks [My Copy] PLoS Comput Biol, Vol. 4, No. 7. (11 July 2008), e1000114. by Joseph Ivanic, Anders Wallqvist, Jaques Reifman posted to protein_interaction by jfr on 2008-09-29 15:30:40 as along with 2 people Ema kluck
	Construction of a cancer-perturbed protein-protein interaction network for discovery of apoptosis drug targets. [My Copy] BMC systems biology, Vol. 2, No. 1. (2008) by L. H. Chu, B. S. Chen posted to drug_discovery network protein_interaction systems_biology by jfr on 2008-09-29 11:12:02 as along with 4 people liblab reyez renatomilani guhjy
	Identifying functional modules in protein-protein interaction networks: an integrated exact approach [My Copy] Bioinformatics, Vol. 24, No. 13. (1 July 2008), pp. i223-231. by Marcus T. Dittrich, Gunnar W. Klau, Andreas Rosenwald, Thomas Dandekar, Tobias Muller posted to module_detection network protein_interaction by jfr on 2008-09-26 10:58:11 as along with 8 people carlk babakap diamantis guhjy marck renatomilani tmmurali dragonrez
	Characterization of microRNA-regulated protein-protein interaction network. [My Copy] Proteomics, Vol. 8, No. 10. (19 May 2008), pp. 1975-1979. by Chun-Wei W. Hsu, Hsueh-Fen F. Juan, Hsuan-Cheng C. Huang posted to mirna protein_interaction by jfr on 2008-09-15 10:42:03 as along with 3 people cabbagesofdoom daforerog maralena
	Walking the interactome for prioritization of candidate disease genes. [My Copy] American journal of human genetics, Vol. 82, No. 4. (April 2008), pp. 949-958. by Sebastian Köhler, Sebastian Bauer, Denise Horn, Peter N. Robinson posted to disease_genes network prioritization protein_interaction by jfr on 2008-09-03 16:56:58 as along with 6 people daforerog saket kluck daed guhjy raiyar
	Protein networks in disease. [My Copy] Genome research, Vol. 18, No. 4. (1 April 2008), pp. 644-652. by Trey Ideker, Roded Sharan posted to network protein_interaction review by jfr on 2008-05-16 10:33:51 as along with 27 people shikin carlk isimpson chica saket zufar kaarsinogen giovenko guhjy balicea tmmurali Borelli jwdietrich frohike bootsy nedwards roys mclarenv phoenixzxl brianb schuylrp paolomarcatili gracio thomaskelder ptrobajo raiyar zwang
	Human Proteinpedia enables sharing of human protein data [My Copy] Nature Biotechnology, Vol. 26, No. 2., pp. 164-167. by Suresh Mathivanan, Mukhtar Ahmed, Natalie G. Ahn, et al.Hainard Alexandre, Ramars Amanchy, Philip C. Andrews, Joel S. Bader, Brian M. Balgley, Marcus Bantscheff, Keiryn L. Bennett, Erik Björling, Blagoy Blagoev, Ron Bose, Samir K. Brahmachari, Alma S. Burlingame, Xosé R. Bustelo, Gerard Cagney, Greg T. Cantin, Helene L. Cardasis, Julio E. Celis, Raghothama Chaerkady, Feixia Chu, Philip A. Cole, Catherine E. Costello, Robert J. Cotter, David Crockett, James P. Delany, Angelo M. De Marzo, Leroi V. Desouza, Eric W. Deutsch, Eric Dransfield, Gerard Drewes, Arnaud Droit, Michael J. Dunn, Kojo Elenitoba-Johnson, Rob M. Ewing, Jennifer Van Eyk, Vitor Faca, Jayson Falkner, Xiangming Fang, Catherine Fenselau, Daniel Figeys, Pierre Gagné, Cecilia Gelfi, Kris Gevaert, Jeffrey M. Gimble, Florian Gnad, Renu Goel, Pavel Gromov, Samir M. Hanash, William S. Hancock, H. C. Harsha, Gerald Hart, Faith Hays, Fuchu He, Prashantha Hebbar, Kenny Helsens, Heiko Hermeking, Winston Hide, Karin Hjernø, Denis F. Hochstrasser, Oliver Hofmann, David M. Horn, Ralph H. Hruban, Nieves Ibarrola, Peter James, Ole N. Jensen, Pia H. Jensen, Peter Jung, Kumaran Kandasamy, Indu Kheterpal, Reiko F. Kikuno, Ulrike Korf, Roman Körner, Bernhard Kuster, Min-Seok Kwon, Hyoung-Joo Lee, Young-Jin Lee, Michael Lefevre, Minna Lehvaslaiho, Pierre Lescuyer, Fredrik Levander, Megan S. Lim, Christian Löbke, Joseph A. Loo, Matthias Mann, Lennart Martens, Juan Martinez-Heredia, Mark Mccomb, James Mcredmond, Alexander Mehrle, Rajasree Menon, Christine A. Miller, Harald Mischak, Sujatha S. Mohan, Riaz Mohmood, Henrik Molina, Michael F. Moran, James D. Morgan, Robert Moritz, Martine Morzel, David C. Muddiman, Anuradha Nalli, Daniel J. Navarro, Thomas A. Neubert, Osamu Ohara, Rafael Oliva, Gilbert S. Omenn, Masaaki Oyama, Young-Ki Paik, Kyla Pennington, Rainer Pepperkok, Balamurugan Periaswamy, Emanuel F. Petricoin, Guy G. Poirier, Keshava T. S. Prasad, Samuel O. Purvine, Abdul B. Rahiman, Prasanna Ramachandran, Y. L. Ramachandra, Robert H. Rice, Jens Rick, Ragna H. Ronnholm, Johanna Salonen, Jean-Charles Sanchez, Thierry Sayd, Beerelli Seshi, Kripa Shankari, Shi J. Sheng, Vivekananda Shetty, K. Shivakumar, Richard J. Simpson, Ravi Sirdeshmukh, Michael K. W. Siu, Jeffrey C. Smith, Richard D. Smith, David J. States, Sumio Sugano, Matthew Sullivan, Giulio Superti-Furga, Maarit Takatalo, Visith Thongboonkerd, Jonathan C. Trinidad, Mathias Uhlen, Joël Vandekerckhove, Julian Vasilescu, Timothy D. Veenstra, José-Manuel Vidal-Taboada, Mauno Vihinen, Robin Wait, Xiaoyue Wang, Stefan Wiemann, Billy Wu, Tao Xu, John R. Yates, Jun Zhong, Ming Zhou, Yunping Zhu, Petra Zurbig, Akhilesh Pandey posted to annotation database protein_interaction proteomics resource by jfr on 2008-04-30 16:55:49 as along with 7 people Arnaud brianb guhjy tmmurali dullhunk jdiezperezj drbal
	Graph kernels for disease outcome prediction from protein-protein interaction networks. [My Copy] Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing (2007), pp. 4-15. by K. M. Borgwardt, H. P. Kriegel, S. V. Vishwanathan, N. N. Schraudolph posted to classification gene_expression integration methodology protein_interaction by jfr on 2008-04-11 17:51:25 as
	Discovery of protein interaction networks shared by diseases. [My Copy] Pacific Symposium on Biocomputing. Pacific Symposium on Biocomputing (2007), pp. 76-87. by L. Sam, Y. Liu, J. Li, C. Friedman, Y. A. Lussier posted to methodology protein_interaction by jfr on 2008-04-11 16:43:53 as along with 1 person saket
	Protein-protein interaction networks and biology--what's the connection? [My Copy] Nature biotechnology, Vol. 26, No. 1. (January 2008), pp. 69-72. by Luke Hakes, John W. Pinney, David L. Robertson, Simon C. Lovell posted to network protein_interaction by jfr on 2008-04-11 16:31:00 as along with 19 people and 1 group ptrobajo colmryan lawraga flbarroso Yanno guhjy tmmurali balicea dullhunk neils mikaelhuss cjeans nedwards biehl shikin mclarenv Yumyai paolomarcatili zdai GeneGo
	Growing functional modules from a seed protein via integration of protein interaction and gene expression data [My Copy] BMC Bioinformatics, Vol. 8 (23 October 2007), 408. by Ioannis A. Maraziotis, Konstantina Dimitrakopoulou, Anastasios Bezerianos posted to gene_expression integration module_detection protein_interaction by jfr on 2008-04-09 14:02:23 as along with 3 people carlk dragonrez iris_2001
	Towards a proteome-scale map of the human protein-protein interaction network [My Copy] Nature, Vol. 437, No. 7062. (20 October 2005), pp. 1173-1178. by Jean-Francois Rual, Kavitha Venkatesan, Tong Hao, et al.Tomoko Hirozane-Kishikawa, Amelie Dricot, Ning Li, Gabriel F. Berriz, Francis D. Gibbons, Matija Dreze, Nono Ayivi-Guedehoussou, Niels Klitgord, Christophe Simon, Mike Boxem, Stuart Milstein, Jennifer Rosenberg, Debra S. Goldberg, Lan V. Zhang, Sharyl L. Wong, Giovanni Franklin, Siming Li, Joanna S. Albala, Janghoo Lim, Carlene Fraughton, Estelle Llamosas, Sebiha Cevik, Camille Bex, Philippe Lamesch, Robert S. Sikorski, Jean Vandenhaute, Huda Y. Zoghbi, Alex Smolyar, Stephanie Bosak, Reynaldo Sequerra, Lynn Doucette-Stamm, Michael E. Cusick, David E. Hill, Frederick P. Roth, Marc Vidal posted to protein_interaction by jfr on 2008-02-04 11:42:33 as along with 21 people and 2 groups yaredo fesousa aelef dragonrez kuhn okarsligil lyongu maryee benny wnpx yoh noano gurkanbebek mbeautru eukfn grahamc lpfernandes antonkratz Evangelia csanford ksiek Complex Networks Bioinformatics
	Modular organization of protein interaction networks. [My Copy] Bioinformatics (8 November 2006) by Feng Luo, Yunfeng Yang, Chin-Fu F. Chen, Roger Chang, Jizhong Zhou, Richard H H. Scheuermann posted to motif network protein_interaction by jfr on 2008-01-23 15:00:49 as along with 3 people grahamc massivemayhem maralena
	A Gibbs sampler for the identification of gene expression and network connectivity consistency. [My Copy] Bioinformatics (23 October 2006) by Mark P P. Brynildsen, Linh M M. Tran, James C C. Liao posted to integration network protein_interaction by jfr on 2008-01-09 12:09:17 as along with 1 person gpalidwor
	Detecting functional modules in the yeast proteinprotein interaction network [My Copy] Bioinformatics, Vol. 22, No. 18. (15 September 2006), pp. 2283-2290. by Chen, Jingchun, Yuan, Bo posted to module_detection network protein_interaction by jfr on 2008-01-09 12:07:50 as along with 4 people lawraga tmmurali maralena ellakat
	A novel functional module detection algorithm for protein-protein interaction network [My Copy] Algorithms for Molecular Biology, Vol. 1 (05 December 2006), 24. by Woochang Hwang, Young-Rae Cho, Aidong Zhang, Murali Ramanathan posted to module_detection network protein_interaction by jfr on 2008-01-09 11:55:03 as along with 1 person laughcry
	Evaluation of clustering algorithms for protein-protein interaction networks [My Copy] BMC Bioinformatics, Vol. 7 (06 November 2006), 488. by Sylvain Brohee, Jacques van Helden posted to clustering network protein_interaction by jfr on 2008-01-09 11:53:43 as along with 16 people and 1 group kaarsinogen pdelosri chad_davis balajis nirfriedman dquest grahamc cjeans hpaces Pao-Yang oktie carlk Borelli AbnerCYH cerca ethkim EPFL_SB_ITP_LBS
	In Search of the Biological Significance of Modular Structures in Protein Networks [My Copy] PLoS Computational Biology, Vol. 3, No. 6. (1 June 2007), e107. by Zhi Wang, Jianzhi Zhang posted to network protein_interaction by jfr on 2008-01-09 11:52:23 as along with 6 people and 1 group grahamc massivemayhem cjeans zwang cabbagezs pinney Bioinformatics
	Making the most of high-throughput protein-interaction data [My Copy] Genome Biology, Vol. 8 (02 November 2007), 112. by Robert Gentleman, Wolfgang Huber posted to network protein_interaction review by jfr on 2008-01-09 11:41:50 as along with 2 people cerca cjeans
	Comparison of Human Protein-Protein Interaction Maps. [My Copy] Bioinformatics (19 January 2007) by Matthias E E. Futschik, Gautam Chaurasia, Hanspeter Herzel posted to network protein_interaction by jfr on 2007-12-18 13:11:50 as along with 4 people guhjy bicko grahamc frohike
	UniHI: an entry gate to the human protein interactome. [My Copy] Nucleic Acids Res, Vol. 35, No. Database issue. (January 2007) by G. Chaurasia, Y. Iqbal, C. Hänig, H. Herzel, E. E. Wanker, M. E. Futschik posted to database protein_interaction by jfr on 2007-12-18 13:10:56 as along with 3 people guhjy massivemayhem grahamc
	Coverage and error models of protein-protein interaction data by directed graph analysis [My Copy] Genome Biology, Vol. 8 (10 September 2007), R186. by Tony Chiang, Denise Scholtens, Deepayan Sarkar, Robert Gentleman, Wolfgang Huber posted to protein_interaction by jfr on 2007-12-07 14:50:00 as along with 5 people Yanno chad_davis grahamc winterschlaefer Pao-Yang
	Protein interactions and disease: computational approaches to uncover the etiology of diseases [My Copy] Brief Bioinform, Vol. 8, No. 5. (1 September 2007), pp. 333-346. by Maricel G. Kann posted to network protein_interaction review by jfr on 2007-12-03 17:39:13 as along with 8 people carlk isimpson saket winterschlaefer guhjy tmmurali AbnerCYH barriot
	Large-scale mapping of human protein-protein interactions by mass spectrometry. [My Copy] Molecular systems biology, Vol. 3 (2007) by Rob M. Ewing, Peter Chu, Fred Elisma, et al.Hongyan Li, Paul Taylor, Shane Climie, Linda McBroom-Cerajewski, Mark D. Robinson, Liam O'Connor, Michael Li, Rod Taylor, Moyez Dharsee, Yuen Ho, Adrian Heilbut, Lynda Moore, Shudong Zhang, Olga Ornatsky, Yury V. Bukhman, Martin Ethier, Yinglun Sheng, Julian Vasilescu, Mohamed Abu-Farha, Jean-Philippe P. Lambert, Henry S. Duewel, Ian I. Stewart, Bonnie Kuehl, Kelly Hogue, Karen Colwill, Katharine Gladwish, Brenda Muskat, Robert Kinach, Sally-Lin L. Adams, Michael F. Moran, Gregg B. Morin, Thodoros Topaloglou, Daniel Figeys posted to mass_spec protein_interaction proteomics by jfr on 2007-09-13 13:58:12 as along with 5 people aelef guhjy aheilbut grahamc csanford
	A quantitative protein interaction network for the ErbB receptors using protein microarrays [My Copy] Nature (06 November 2005) by Richard B. Jones, Andrew Gordus, Jordan A. Krall, Gavin Macbeath posted to protein_microarray protein_interaction erbb by jfr on 2006-11-06 14:48:49 as along with 6 people and 4 groups okarsligil marcius tny julius koller pjasper Bioinformatics SysbioMPI-TCells BioinfoCIPF SGU-CIPF

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breast_cancer	477
mirna	348
review	345
software	275
classification	272
colon_cancer	234
gene_expression	176
methodology	169
copy-number	161
network	148
integration	138
microarray_technology	133
bioinformatics	122
clustering	121
feature_selection	106
meta-analysis	97
affy	86
database	82
therapy	80
mirna_target	77
gene_set_analysis	69
array-cgh	69
crc_bib	69
regulation	67
low_level	66
rt-pcr	64
systems_biology	63
genomics	60
pathway_analysis	60
subtypes	58
snp-arrays	57
annotation	57
comment	53
quality_control	49
metastasis	47
normalization	46
mutations	43
deep_sequencing	42
ffpe	41
prognosis	41
microarray_analysis	40
estrogen	40
proteomics	39
cancer	38
bioconductor	37
statistics	37
protein_interaction	35
alternative_splicing	35
progression	35
markers	35
fdr	34
snp	33
methylation	32
r	31
standards	29
mutation	28
tamoxifen	28
class_discovery	28
exon_arrays	25
jfrbib	24
two-color	24
ovarian_cancer	23
mir17-92	23
microarray_protocol	23
pathway	22
experiment_design	22
comparison	21
brca	21
co-expression	21
tfbs	20
survival_analysis	20
model	20
kras	20
p53	19
treatment	19
functional_analysis	19
platform_comparison	18
technology	17
multiple_testing	17
biomarker	16
stem_cell	16
jfrbib04-09	16
module_detection	16
evaluation	16
illumina	16
chip-chip	16
text-mining	15
antisense	15
reproducible_research	15
nmf	15
sequencing	14
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erbb	14
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lung_cancer	13
staging	13
rna_quality	13
stageii	13
egfr	13
tma	13
cell_line	12
cnv	12
marker	12
gene_ontology	12
maqc	12
genotyping	12
loh	11
drug_discovery	11
gene_lists	11
pten	11
missing_values	11
proliferation	11
protocol	11
semantic_web	11
immunohistochemistry	10
disease_genes	10
visualization	10
genome_browser	10
tissue_specificity	10
control_genes	10
tgfb	10
mirna_regulation	10
msi	9
inter-laboratory	9
probe_design	9
segmentation	9
e2f1	8
can_genes	8
chemotherapy	8
sample_size	8
consensus_clustering	8
chip-seq	8
boutique_arrays	8
personalized_medicine	8
myc	8
time-course	8
editorial	8
plos_start	7
18q_loh	7
tiling_array	7
validation	7
mir21	7
lymphoma	7
plos_rules	7
hpc	6
serum	6
er	6
read_mapping	6
promoters	6
stem	6
motif	6
correlation	6
gene_interaction	6
non-coding	6
leukemia	6
community	6
ontology	6
nci60	6
graphs	6
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grid_computing	5
gene_pairs	5
her2	5
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gwas	5
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functional_genomics	5
survival	5
machine_learning	5
cin	5
prioritization	5
mir34	4
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pooling	4
data_curation	4
resource	4
mirna_cluster	4
biobank	4
image_analysis	4
open-source	4
pr	4
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lims	4
mir192	4
grading	4
functional_classification	4
go	4
micro_environment	3
primer	3
bim	3
confounders	3
tutorial	3
mass_spec	3
interaction	3
small_molecule	3
outlier	3
apc	3
low-level	3
wnt	3
svm	3
stroma	3
sop	3
epigenetics	3
chromatin	3
er-positive	3
copa	3
mage	3
sage	3
ngs	3
in-situ	3
roc	3
letter	3
pik3ca	3
evolution	3
hapmap	3
loops	3
cross-study	3
agilent	3
stability	3
glioblastoma	3
triple_negative	3
ontologies	3
biomarkers	3
pca	3
web_server	3
estradiol	2
guidelines	2
lymphocytes	2
ephb	2
ranked_lists	2
luminal_subtype	2
batch-effect	2
filtering	2
cloud_computing	2
serm	2
permutations	2
8q24	2
recommendation	2
protein_networks	2
sweave	2
mir20a	2
20q	2
diagnostic	2
akt	2
thyroid	2
chemo	2
qtl	2
compression	2
oncomine	2
caching	2
bcatenin	2
flow_cytometry	2
projection	2
tbfs	2
upd	2
mir215	2
translational	2
alignment	2
dna_damage	2
semi-supervised	2
cell_cycle	2
stageiii	2
dfs	2
smad	2
snp_arrays	2
target	2
web_resource	2
differential_expression	2
mutual_information	2
protein_microarray	2
meeting_report	2
priors	2
rin	2
cetuximab	2
gene_fusion	2
local_recurrence	2
cdk8	2
bayesian	1
invasion	1
assembly	1
oncogene	1
mirna222	1
mir16-1	1
model-based	1
mir199	1
mir135	1
single_cell	1
smad7	1
xml	1
randomization	1
mir449	1
target_discovery	1
est_analysis	1
funding	1
mir126	1
pre-post	1
circulating_tumor_cells	1
braf	1
neural_networks	1
au-rich	1
wiki	1
apoptosis	1
aroma	1
module	1
biclustering	1
beads	1
bmp	1
pancreatic_cancer	1
dcc	1
brain_cancer	1
cross-species	1
association_studies	1
rna-interference	1
taxane	1
er-negative	1
distance	1
melanoma	1
ccnd1	1
nomogram	1
gene_clusters	1
formats	1
454	1
dasl	1
gene_function_prediction	1
python	1
cervical_cancer	1
shrna	1
reproducibility	1
perturbation	1
stem_cells	1
mir31	1
dye_bias	1
p21	1
meta_analysis	1
plasma	1
in_situ_hybridization	1
formalization	1
metastatis	1
passenger_genes	1
met	1
mirna_discovery	1
cancer_hallmarks	1
tissue_origin	1
mir145	1
modules	1
aurora_kinase	1
selection_bias	1
erg	1
3utr	1
power_analysis	1
markup	1
pilot_study	1
ret	1
gene_networks	1
driver_genes	1
metagene	1
cables1	1
mixture_models	1
prb	1
data_mining	1
fgfr2	1
fantom	1
signaling	1
ecm	1
translocation	1
il8	1
mir217	1
concordance	1
simulation	1
mir101	1
graph_approach	1
peripheral_blood	1
news	1
mir203	1
mir15a	1
mcm7	1
genome_assembly	1
resampling	1
transfection	1
tcga	1
mir-106b-25	1
rnai	1
ndrg4	1
ependymoma	1
oncogene_addiction	1
hypoxia	1
mirna221	1
microrna	1
ucs	1
mir155	1
gastric_cancer	1
mir143	1
bambi	1
latex	1
genoty	1
fish	1
disease	1
ensemble	1
dimension_reduction	1
asco	1
genetics	1
mrna-seq	1
rb	1
myb	1
mir216a	1
aging	1
latent	1
translation	1
pattern_discovery	1
pbc	1
early-stage	1
eno1	1
study_design	1
clusterin	1
sampling	1

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