jfr's subtypes [58 articles] Export

Recent papers added to jfr's library classified by the tag subtypes. You can also see everyone's subtypes.

	Effect of molecular disease subsets on disease-free survival in randomized adjuvant chemotherapy trials for estrogen receptor-positive breast cancer. [My Copy] Journal of clinical oncology : official journal of the American Society of Clinical Oncology, Vol. 26, No. 28. (1 October 2008), pp. 4679-4683. by Lajos Pusztai, Kristine Broglio, Fabrice Andre, W. Fraser Symmans, Kenneth R. Hess, Gabriel N. Hortobagyi posted to subtypes er-positive dfs chemotherapy breast_cancer by jfr on 2009-11-25 11:12:07 as
	Data driven derivation of cutoffs from a pool of 3,030 Affymetrix arrays to stratify distinct clinical types of breast cancer. [My Copy] Breast cancer research and treatment (20 May 2009) by Thomas Karn, Dirk Metzler, Eugen Ruckhäberle, et al.Lars Hanker, Regine Gätje, Christine Solbach, Andre Ahr, Marcus Schmidt, Uwe Holtrich, Manfred Kaufmann, Achim Rody posted to subtypes proliferation pr meta-analysis her2 er breast_cancer by jfr on 2009-11-18 13:14:00 as
	Ki67 index, HER2 status, and prognosis of patients with luminal B breast cancer. [My Copy] Journal of the National Cancer Institute, Vol. 101, No. 10. (20 May 2009), pp. 736-750. by Maggie C. Cheang, Stephen K. Chia, David Voduc, et al.Dongxia Gao, Samuel Leung, Jacqueline Snider, Mark Watson, Sherri Davies, Philip S. Bernard, Joel S. Parker, Charles M. Perou, Matthew J. Ellis, Torsten O. Nielsen posted to subtypes rt-pcr proliferation pr luminal_subtype immunohistochemistry her2 er breast_cancer by jfr on 2009-11-15 14:43:06 as along with 1 person zufar
	Breast Cancer Subtypes and Response to Docetaxel in Node-Positive Breast Cancer: Use of an Immunohistochemical Definition in the BCIRG 001 Trial [My Copy] J Clin Oncol (9 February 2009), JCO.2008.18.1024. by Judith Hugh, John Hanson, Maggie C. Cheang, et al.Torsten O. Nielsen, Charles M. Perou, Charles Dumontet, John Reed, Maryla Krajewska, Isabelle Treilleux, Matthieu Rupin, Emmanuelle Magherini, John Mackey, Miguel Martin, Charles Vogel posted to trial therapy subtypes breast_cancer by jfr on 2009-11-09 13:36:25 as
	Integrated analysis of breast cancer cell lines reveals unique signaling pathways [My Copy] Genome Biology, Vol. 10, No. 3. (25 March 2009), R31. by Laura Heiser, Nicholas Wang, Carolyn Talcott, et al.Keith Laderoute, Merrill Knapp, Yinghui Guan, Zhi Hu, Safiyyah Ziyad, Barbara Weber, Sylvie Laquerre, Jeffrey Jackson, Richard Wooster, Wen Kuo, Joe Gray, Paul Spellman posted to subtypes network cell_line breast_cancer by jfr on 2009-11-09 13:31:09 as along with 4 people and 1 group ipark-kaist thegoose shikin Stew Bioinformatics - CRUK
	Combining chromosomal arm status and significantly aberrant genomic locations reveals new cancer subtypes. [My Copy] Cancer informatics, Vol. 7 (2009), pp. 91-104. by Tal Shay, Wanyu L. Lambiv, Anat Reiner-Benaim, Monika E. Hegi, Eytan Domany posted to subtypes copy-number by jfr on 2009-11-08 23:01:41 as
	Molecular classification of solid tumours: towards pathway-driven therapeutics. [My Copy] British journal of cancer, Vol. 100, No. 10. (19 May 2009), pp. 1517-1522. by C. Swanton, C. Caldas posted to subtypes review personalized_medicine breast_cancer by jfr on 2009-11-08 22:22:43 as along with 5 people rdiaz tonamswish guhjy xtizon giovenko
	Genetic Alterations and Oncogenic Pathways Associated with Breast Cancer Subtypes [My Copy] Molecular Cancer Research, Vol. 7, No. 4. (April 2009), pp. 511-522. by Xiaolan Hu, Howard M. Stern, Lin Ge, et al.Carol O'Brien, Lauren Haydu, Cynthia D. Honchell, Peter M. Haverty, Brock A. Peters, Thomas D. Wu, Lukas C. Amler, John Chant, David Stokoe, Mark R. Lackner, Guy Cavet posted to subtypes copy-number breast_cancer by jfr on 2009-11-08 22:06:10 as along with 2 people rdiaz Zephyrus
	Introducing molecular subtyping of breast cancer into the clinic? [My Copy] Journal of clinical oncology : official journal of the American Society of Clinical Oncology, Vol. 27, No. 8. (10 March 2009), pp. 1153-1154. by Therese Sørlie posted to subtypes comment breast_cancer by jfr on 2009-11-02 16:01:52 as along with 1 person lrust
	Supervised risk predictor of breast cancer based on intrinsic subtypes. [My Copy] Journal of clinical oncology : official journal of the American Society of Clinical Oncology, Vol. 27, No. 8. (10 March 2009), pp. 1160-1167. by Joel S. Parker, Michael Mullins, Maggie C. Cheang, et al.Samuel Leung, David Voduc, Tammi Vickery, Sherri Davies, Christiane Fauron, Xiaping He, Zhiyuan Hu, John F. Quackenbush, Inge J. Stijleman, Juan Palazzo, J. S. Marron, Andrew B. Nobel, Elaine Mardis, Torsten O. Nielsen, Matthew J. Ellis, Charles M. Perou, Philip S. Bernard posted to breast_cancer classification subtypes by jfr on 2009-07-22 11:45:47 as along with 3 people Zephyrus misonneh ptrobajo
	Tiling path genomic profiling of grade 3 invasive ductal breast cancers. [My Copy] Clinical cancer research : an official journal of the American Association for Cancer Research, Vol. 15, No. 8. (15 April 2009), pp. 2711-2722. by R. Natrajan, M. B. Lambros, S. M. Rodríguez-Pinilla, et al.G. Moreno-Bueno, D. S. Tan, C. Marchió, R. Vatcheva, S. Rayter, B. Mahler-Araujo, L. G. Fulford, D. Hungermann, A. Mackay, A. Grigoriadis, K. Fenwick, N. Tamber, D. Hardisson, A. Tutt, J. Palacios, C. J. Lord, H. Buerger, A. Ashworth, J. S. Reis-Filho posted to breast_cancer copy-number subtypes by jfr on 2009-07-17 10:19:30 as along with 1 person Zephyrus
	Triple-Negative Breast Cancer: Risk Factors to Potential Targets [My Copy] Clin Cancer Res, Vol. 14, No. 24. (15 December 2008), pp. 8010-8018. by Bryan P. Schneider, Eric P. Winer, William D. Foulkes, et al.Judy Garber, Charles M. Perou, Andrea Richardson, George W. Sledge, Lisa A. Carey posted to breast_cancer review subtypes target triple_negative by jfr on 2009-07-09 13:56:12 as along with 3 people and 1 group Zephyrus NaliniChilkov misonneh Breast Cancer Reading Club
	Knowledge driven decomposition of tumor expression profiles [My Copy] BMC Bioinformatics, Vol. 10, No. Suppl 1. (2009), S20. by Martin van Vliet, Lodewyk Wessels, Marcel Reinders posted to breast_cancer gene_set_analysis subtypes by jfr on 2009-06-30 17:06:46 as along with 1 person and 1 group zufar Bioinformatics
	Gene-Expression Signatures in Breast Cancer [My Copy] N Engl J Med, Vol. 360, No. 8. (19 February 2009), pp. 790-800. by Christos Sotiriou, Lajos Pusztai posted to breast_cancer classification gene_expression review subtypes by jfr on 2009-06-16 16:52:11 as along with 6 people and 1 group songpku giovenko tonamswish Zephyrus edwardli misonneh Breast Cancer Reading Club
	How different are luminal A and basal breast cancers? [My Copy] International journal of cancer. Journal international du cancer, Vol. 124, No. 6. (15 March 2009), pp. 1338-1348. by F. Bertucci, P. Finetti, N. Cervera, et al.E. Charafe-Jauffret, M. Buttarelli, J. Jacquemier, M. Chaffanet, D. Maraninchi, P. Viens, D. Birnbaum posted to basal_subtype breast_cancer luminal_subtype subtypes by jfr on 2009-03-18 15:24:57 as
	Refinement of breast cancer classification by molecular characterization of histological special types. [My Copy] The Journal of pathology, Vol. 216, No. 2. (October 2008), pp. 141-150. by B. Weigelt, H. M. Horlings, B. Kreike, et al.M. M. Hayes, M. Hauptmann, L. F. Wessels, D. de Jong, M. J. Van de Vijver, L. J. Van't Veer, J. L. Peterse posted to breast_cancer subtypes by jfr on 2009-02-25 18:00:20 as along with 2 people Zephyrus frohike
	Breast cancer special types: why bother? [My Copy] The Journal of pathology, Vol. 216, No. 4. (December 2008), pp. 394-398. by J. S. Reis-Filho, S. R. Lakhani posted to breast_cancer comment subtypes by jfr on 2009-01-09 11:29:41 as along with 1 person Zephyrus
	Genes responsive to both oxidant stress and loss of estrogen receptor function identify a poor prognosis group of ER-positive primary breast cancers [My Copy] Breast Cancer Research, Vol. 10 (16 July 2008), R61. by Christina Yau, Christopher C. Benz posted to breast_cancer estrogen prognosis subtypes by jfr on 2008-11-07 09:56:37 as along with 1 person and 1 group Zephyrus Breast Cancer Reading Club
	Molecular subtypes of diffuse large B-cell lymphoma arise by distinct genetic pathways [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 36. (2008), pp. 13520-13525. by Georg Lenz, George W. Wright, Tolga N. C. Emre, et al.Holger Kohlhammer, Sandeep S. Dave, Eric R. Davis, Shannon Carty, Lloyd T. Lam, A. L. Shaffer, Wenming Xiao, John Powell, Andreas Rosenwald, German Ott, Hans K. Muller-Hermelink, Randy D. Gascoyne, Joseph M. Connors, Elias Campo, Elaine S. Jaffe, Jan Delabie, Erlend B. Smeland, Lisa M. Rimsza, Richard I. Fisher, Dennis D. Weisenburger, Wing C. Chan, Louis M. Staudt posted to array-cgh gene_expression integration lymphoma subtypes by jfr on 2008-11-05 09:24:58 as along with 1 person oelemento
	Biological Processes Associated with Breast Cancer Clinical Outcome Depend on the Molecular Subtypes [My Copy] Clinical Cancer Research, Vol. 14, No. 16. (15 August 2008), pp. 5158-5165. by Christine Desmedt, Benjamin Haibe-Kains, Pratyaksha Wirapati, et al.Marc Buyse, Denis Larsimont, Gianluca Bontempi, Mauro Delorenzi, Martine Piccart, Christos Sotiriou posted to breast_cancer meta-analysis subtypes by jfr on 2008-10-14 18:25:13 as along with 3 people and 1 group HermanSontrop giovenko Zephyrus Breast Cancer Reading Club
	Novel molecular subtypes of serous and endometrioid ovarian cancer linked to clinical outcome. [My Copy] Clinical cancer research : an official journal of the American Association for Cancer Research, Vol. 14, No. 16. (15 August 2008), pp. 5198-5208. by R. W. Tothill, A. V. Tinker, J. George, et al.R. Brown, S. B. Fox, S. Lade, D. S. Johnson, M. K. Trivett, D. Etemadmoghadam, B. Locandro, N. Traficante, S. Fereday, J. A. Hung, Y. E. Chiew, I. Haviv, , D. Gertig, A. DeFazio, D. D. Bowtell posted to ovarian_cancer subtypes by jfr on 2008-10-14 18:23:43 as
	Comparison of molecular phenotypes of ductal carcinoma in situ and invasive breast cancer [My Copy] Breast Cancer Research, Vol. 10 (05 August 2008), R67. by Rulla M. Tamimi, Heather J. Baer, Jonathan Marotti, et al.Mark Galan, Laurie Galaburda, Yineng Fu, Anne C. Deitz, James L. Connolly, Stuart J. Schnitt, Graham A. Colditz, Laura C. Collins posted to breast_cancer subtypes tma by jfr on 2008-10-01 11:07:53 as along with 2 people and 1 group songpku Zephyrus Breast Cancer Reading Club
	Breast cancer: origins and evolution. [My Copy] The Journal of clinical investigation, Vol. 117, No. 11. (November 2007), pp. 3155-3163. by K. Polyak posted to breast_cancer progression review subtypes by jfr on 2008-09-16 09:16:27 as along with 2 people and 2 groups shikin Zephyrus R.E.A.D Breast Cancer Reading Club
	Subclass Mapping: Identifying Common Subtypes in Independent Disease Data Sets [My Copy] PLoS ONE, Vol. 2, No. 11. (21 November 2007), e1195. by Yujin Hoshida, Jean-Philippe Brunet, Pablo Tamayo, Todd R. Golub, Jill P. Mesirov posted to clustering projection subtypes by jfr on 2008-09-03 16:47:11 as along with 3 people zufar aviad_work laral
	Integrated genetic and epigenetic analysis identifies three different subclasses of colon cancer [My Copy] Proceedings of the National Academy of Sciences, Vol. 104, No. 47. (20 November 2007), pp. 18654-18659. by Lanlan Shen, Minoru Toyota, Yutaka Kondo, et al.E. Lin, Li Zhang, Yi Guo, Natalie S. Hernandez, Xinli Chen, Saira Ahmed, Kazuo Konishi, Stanley R. Hamilton, Jean-Pierre J. Issa posted to colon_cancer integration mutations subtypes by jfr on 2008-09-03 14:59:52 as along with 1 person epigenetics
	Subtypes of Breast Cancer Show Preferential Site of Relapse [My Copy] Cancer Res, Vol. 68, No. 9. (1 May 2008), pp. 3108-3114. by Marcel Smid, Yixin Wang, Yi Zhang, et al.Anieta M. Sieuwerts, Jack Yu, Jan G. M. Klijn, John A. Foekens, John W. M. Martens posted to breast_cancer subtypes by jfr on 2008-08-05 16:51:22 as along with 2 people tonamswish Zephyrus
	EGFR associated expression profiles vary with breast tumor subtype [My Copy] BMC Genomics, Vol. 8 (31 July 2007), 258. by Katherine A. Hoadley, Victor J. Weigman, Cheng Fan, et al.Lynda R. Sawyer, Xiaping He, Melissa A. Troester, Carolyn I. Sartor, Thais Rieger-House, Philip S. Bernard, Lisa A. Carey, Charles M. Perou posted to breast_cancer egfr subtypes by jfr on 2008-02-05 11:28:33 as
	Gene expression in 16q is associated with survival and differs between Sørlie breast cancer subtypes. [My Copy] Genes Chromosomes Cancer, Vol. 46, No. 1. (January 2007), pp. 87-97. by K. Wennmalm, S. Calza, A. Ploner, et al.P. Hall, J. Bjöhle, S. Klaar, J. Smeds, Y. Pawitan, J. Bergh posted to breast_cancer copy-number integration subtypes by jfr on 2008-01-23 15:16:18 as along with 1 person Zephyrus
	Cytokeratin KRT8/18 expression differentiates distinct subtypes of grade 3 invasive ductal carcinoma of the breast. [My Copy] Cancer Genet Cytogenet, Vol. 178, No. 2. (15 October 2007), pp. 94-103. by L. C. Walker, G. C. Harris, A. J. Holloway, et al.G. W. McKenzie, J. E. Wells, B. A. Robinson, C. M. Morris posted to breast_cancer subtypes by jfr on 2007-12-17 12:21:50 as
	Molecular subtyping of breast cancer: opportunities for new therapeutic approaches. [My Copy] Cell Mol Life Sci (22 October 2007) by P B. Mullan, R C. Millikan posted to breast_cancer review subtypes therapy by jfr on 2007-12-17 12:20:27 as along with 2 people Zephyrus laral
	MicroRNA expression profiling of human breast cancer identifies new markers of tumor subtype [My Copy] Genome Biology, Vol. 8, No. 10. (08 October 2007), R214. by Cherie Blenkiron, Leonard Goldstein, Natalie Thorne, et al.Inmaculada Spiteri, Suet F. Chin, Mark Dunning, Nuno B. Morais, Andrew Teschendorff, Andrew Green, Ian Ellis, Simon Tavare, Carlos Caldas, Eric Miska posted to breast_cancer mirna subtypes by jfr on 2007-12-07 17:53:45 as along with 7 people and 2 groups songpku Zephyrus rdiaz Stew heliopais ealloza giovenko Bioinformatics - CRUK microRNA
	High-resolution array-CGH and expression profiling identifies a novel genomic subtype of ER negative breast cancer [My Copy] Genome Biology, Vol. 8 (09 October 2007), R215. by Suet F. Chin, Andrew E. Teschendorff, John C. Marioni, et al.Yanzhong Wang, Nuno L. Barbosa-Morais, Natalie P. Thorne, Jose L. Costa, Sarah E. Pinder, Mark A. van de Wiel, Andrew R. Green, Ian O. Ellis, Peggy L. Porter, Simon Tavare, James D. Brenton, Bauke Ylstra, Carlos Caldas posted to array-cgh breast_cancer estrogen subtypes by jfr on 2007-12-07 17:51:31 as along with 3 people frohike rdiaz chrisamiller
	FOXA1 expression in breast cancer--correlation with luminal subtype A and survival. [My Copy] Clin Cancer Res, Vol. 13, No. 15 Pt 1. (1 August 2007), pp. 4415-4421. by S. Badve, D. Turbin, M. A. Thorat, et al.A. Morimiya, T. O. Nielsen, C. M. Perou, S. Dunn, D. G. Huntsman, H. Nakshatri posted to breast_cancer marker subtypes by jfr on 2007-12-04 11:52:03 as
	Cross-study analysis of gene expression data for intermediate neuroblastoma identifies two biological subtypes [My Copy] BMC Cancer, Vol. 7 (25 May 2007), 89. by Patrick Warnat, Andre Oberthuer, Matthias Fischer, Frank Westermann, Roland Eils, Benedikt Brors posted to subtypes meta-analysis by jfr on 2007-11-28 11:58:59 as
	Analysis of breast cancer progression using principal component analysis and clustering. [My Copy] J Biosci, Vol. 32, No. 5. (August 2007), pp. 1027-1039. by G. Alexe, G. S. Dalgin, S. Ganesan, C. Delisi, G. Bhanot posted to breast_cancer class_discovery subtypes by jfr on 2007-11-27 13:26:40 as
	Challenges in the stratification of breast tumors for tailored therapies. [My Copy] Bull Cancer, Vol. 93, No. 8. (1 August 2006) by J. P. Thiery, X. Sastre-Garau, B. Vincent-Salomon, et al.X. Sigal-Zafrani, J. Y. Pierga, C. Decraene, J. P. Meyniel, E. Gravier, B. Asselain, Y. De Rycke, P. Hupe, E. Barillot, S. Ajaz, M. Faraldo, M. A. Deugnier, M. Glukhova, D. Medina, posted to breast_cancer class_discovery review subtypes by jfr on 2007-11-27 09:54:52 as
	A new molecular breast cancer subclass defined from a large scale real-time quantitative RT-PCR study [My Copy] BMC Cancer, Vol. 7 (05 March 2007), 39. by Maia Chanrion, Helene Fontaine, Carmen Rodriguez, et al.Vincent Negre, Frederic Bibeau, Charles Theillet, Alain Henaut, Jean-Marie Darbon posted to breast_cancer class_discovery rt-pcr subtypes by jfr on 2007-11-26 10:30:46 as
	Correction: Discovery and validation of breast cancer subtypes [My Copy] BMC Genomics, Vol. 8 (13 April 2007), 101. by Amy V. Kapp, Stefanie S. Jeffrey, Anita Langerod, et al.Anne-Lise Borresen-Dale, Wonshik Han, Dong-Young Noh, Ida R. K. Bukholm, Monica Nicolau, Patrick O. Brown, Robert Tibshirani posted to breast_cancer clustering subtypes by jfr on 2007-07-19 14:45:17 as
	Discovery and validation of breast cancer subtypes [My Copy] BMC Genomics, Vol. 7 (11 September 2006), 231. by Amy V. Kapp, Stefanie S. Jeffrey, Anita Langerod, et al.Anne-Lise Borresen-Dale, Wonshik Han, Dong-Young Noh, Ida R. K. Bukholm, Monica Nicolau, Patrick O. Brown, Robert Tibshirani posted to breast_cancer clustering subtypes by jfr on 2007-07-19 14:43:12 as
	Definition of clinically distinct molecular subtypes in estrogen receptor-positive breast carcinomas through genomic grade. [My Copy] Journal of clinical oncology : official journal of the American Society of Clinical Oncology, Vol. 25, No. 10. (1 April 2007), pp. 1239-1246. by S. Loi, B. Haibe-Kains, C. Desmedt, et al.F. Lallemand, A. M. Tutt, C. Gillet, P. Ellis, A. Harris, J. Bergh, J. A. Foekens, J. G. Klijn, D. Larsimont, M. Buyse, G. Bontempi, M. Delorenzi, M. J. Piccart, C. Sotiriou posted to breast_cancer grading subtypes by jfr on 2007-07-09 13:41:12 as along with 4 people and 1 group vertikalist frohike Zephyrus giovenko BTS-PT-AS-CS
	Gene expression profiles do not consistently predict the clinical treatment response in locally advanced breast cancer. [My Copy] Mol Cancer Ther, Vol. 5, No. 11. (November 2006), pp. 2914-2918. by T. Sørlie, C. M. Perou, C. Fan, et al.S. Geisler, T. Aas, A. Nobel, G. Anker, L. A. Akslen, D. Botstein, A. L. Børresen-Dale, P. E. Lønning posted to breast_cancer subtypes treatment by jfr on 2007-05-14 15:05:10 as
	Molecular subtypes of breast cancer and amplification of topoisomerase II[alpha]: predictive role in dose intensive adjuvant chemotherapy [My Copy] British Journal of Cancer, Vol. aop, No. current. (31 October 2006) by J. Hannemann, P. Kristel, H. van Tinteren, et al.M. Bontenbal, Q. G. C. M. van Hoesel, W. M. Smit, M. A. Nooij, E. E. Voest, E. van der Wall, P. Hupperets, E. G. E. de Vries, S. Rodenhuis, M. J. van de Vijver posted to breast_cancer copy-number subtypes by jfr on 2007-05-11 15:05:25 as
	Identification of cell-of-origin breast tumor subtypes in inflammatory breast cancer by gene expression profiling. [My Copy] Breast Cancer Res Treat, Vol. 95, No. 3. (February 2006), pp. 243-255. by S. J. Van Laere, G. G. Van den Eynden, I. Van der Auwera, et al.M. Vandenberghe, P. van Dam, E. A. Van Marck, K. L. van Golen, P. B. Vermeulen, L. Y. Dirix posted to breast_cancer subtypes by jfr on 2007-05-10 18:28:47 as
	Distinct patterns of DNA copy number alteration are associated with different clinicopathological features and gene-expression subtypes of breast cancer [My Copy] Genes, Chromosomes and Cancer, Vol. 45, No. 11. (November 2006), pp. 1033-1040. by Anna Bergamaschi, Young H. Kim, Pei Wang, et al.Therese Sørlie, Tina Hernandez-Boussard, Per E. Lonning, Robert Tibshirani, Anne-Lise Børresen-Dale, Jonathan R. Pollack posted to array-cgh breast_cancer copy-number subtypes by jfr on 2007-03-09 17:19:07 as along with 5 people stharward frohike srp33 rdiaz emb51
	Using array-comparative genomic hybridization to define molecular portraits of primary breast cancers [My Copy] Oncogene, Vol. aop, No. current. by S. F. Chin, Y. Wang, N. P. Thorne, et al.A. E. Teschendorff, S. E. Pinder, M. Vias, A. Naderi, I. Roberts, N. L. Barbosa-Morais, M. J. Garcia, N. G. Iyer, T. Kranjac, J. F. R. Robertson, S. Aparicio, S. Tavaré, I. Ellis, J. D. Brenton, C. Caldas, posted to subtypes breast_cancer array-cgh by jfr on 2007-02-06 17:56:53 as
	Intrinsic molecular signature of breast cancer in a population-based cohort of 412 patients [My Copy] Breast Cancer Research, Vol. 8 (17 July 2006), R34. by Stefano Calza, Per Hall, Gert Auer, et al.Judith Bjöhle, Sigrid Klaar, Ulrike Kronenwett, Edison T. Liu, Lance Miller, Alexander Ploner, Johanna Smeds, Jonas Bergh, Yudi Pawitan posted to subtypes breast_cancer by jfr on 2007-02-06 14:33:53 as
	Phenotypic evaluation of the basal-like subtype of invasive breast carcinoma. [My Copy] Mod Pathol, Vol. 19, No. 2. (February 2006), pp. 264-271. by C. A. Livasy, G. Karaca, R. Nanda, et al.M. S. Tretiakova, O. I. Olopade, D. T. Moore, C. M. Perou posted to tma subtypes breast_cancer by jfr on 2007-02-06 12:02:12 as along with 1 person Zephyrus
	High-throughput protein expression analysis using tissue microarray technology of a large well-characterised series identifies biologically distinct classes of breast cancer confirming recent cDNA expression analyses. [My Copy] Int J Cancer, Vol. 116, No. 3. (1 September 2005), pp. 340-350. by D. M. Abd El-Rehim, G. Ball, S. E. Pinder, et al.E. Rakha, C. Paish, J. F. Robertson, D. Macmillan, R. W. Blamey, I. O. Ellis posted to tma subtypes breast_cancer by jfr on 2007-02-06 12:01:03 as
	Evaluation of MetriGenix custom 4D arrays applied for detection of breast cancer subtypes. [My Copy] BMC Cancer, Vol. 6 (2006) by A. A. Muggerud, H. Johnsen, D. A. Barnes, et al.A. Steel, P. E. Lønning, B. Naume, T. Sørlie, A. L. Børresen-Dale posted to subtypes microarray_technology breast_cancer by jfr on 2007-02-06 11:57:27 as
	An unsupervised approach to identify molecular phenotypic components influencing breast cancer features. [My Copy] Cancer Res, Vol. 64, No. 5. (1 March 2004), pp. 1584-1588. by F. M. Selaru, J. Yin, A. Olaru, et al.Y. Mori, Y. Xu, S. H. Epstein, F. Sato, E. Deacu, S. Wang, A. Sterian, A. Fulton, J. M. Abraham, D. Shibata, C. Baquet, S. A. Stass, S. J. Meltzer posted to subtypes class_discovery breast_cancer by jfr on 2007-01-30 10:12:05 as along with 1 person Zephyrus

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breast_cancer	474
review	345
mirna	341
software	275
classification	272
colon_cancer	230
gene_expression	176
methodology	169
copy-number	161
network	148
integration	138
microarray_technology	133
bioinformatics	121
clustering	121
feature_selection	106
meta-analysis	97
affy	86
database	81
therapy	80
mirna_target	76
array-cgh	69
crc_bib	69
gene_set_analysis	69
low_level	66
regulation	66
systems_biology	63
rt-pcr	62
pathway_analysis	60
genomics	59
subtypes	58
annotation	57
snp-arrays	57
comment	52
quality_control	48
metastasis	46
normalization	46
mutations	43
deep_sequencing	42
ffpe	41
prognosis	41
estrogen	40
microarray_analysis	40
proteomics	39
cancer	38
bioconductor	37
statistics	37
alternative_splicing	35
markers	35
progression	35
protein_interaction	35
fdr	34
snp	33
methylation	32
r	30
class_discovery	28
mutation	28
standards	28
tamoxifen	28
exon_arrays	25
jfrbib	24
microarray_protocol	23
mir17-92	23
ovarian_cancer	23
two-color	23
experiment_design	22
pathway	22
brca	21
co-expression	21
comparison	21
model	20
survival_analysis	20
tfbs	20
kras	19
p53	19
treatment	19
functional_analysis	18
platform_comparison	18
technology	17
chip-chip	16
evaluation	16
illumina	16
jfrbib04-09	16
module_detection	16
multiple_testing	16
stem_cell	16
antisense	15
biomarker	15
nmf	15
reproducible_research	15
text-mining	15
basal_subtype	14
bio_signature	14
erbb	14
sequencing	14
egfr	13
lung_cancer	13
rna_quality	13
stageii	13
staging	13
tma	13
cnv	12
gene_ontology	12
genotyping	12
maqc	12
marker	12
cell_line	11
drug_discovery	11
gene_lists	11
loh	11
missing_values	11
proliferation	11
protocol	11
semantic_web	11
control_genes	10
disease_genes	10
genome_browser	10
pten	10
tissue_specificity	10
visualization	10
immunohistochemistry	9
mirna_regulation	9
msi	9
probe_design	9
segmentation	9
tgfb	9
boutique_arrays	8
can_genes	8
chip-seq	8
consensus_clustering	8
e2f1	8
inter-laboratory	8
personalized_medicine	8
sample_size	8
time-course	8
18q_loh	7
chemotherapy	7
editorial	7
lymphoma	7
myc	7
tiling_array	7
validation	7
community	6
correlation	6
gene_interaction	6
graphs	6
hpc	6
leukemia	6
mir21	6
motif	6
nci60	6
non-coding	6
ontology	6
plos_rules	6
promoters	6
read_mapping	6
serum	6
stem	6
cin	5
cross-platform	5
functional_genomics	5
gene_pairs	5
grid_computing	5
gwas	5
her2	5
machine_learning	5
plos_primer	5
plos_start	5
prioritization	5
prostate_cancer	5
radiation	5
survival	5
trial	5
biobank	4
data_curation	4
er	4
functional_classification	4
go	4
grading	4
image_analysis	4
lims	4
mir34	4
mirna_cluster	4
pooling	4
public_data	4
resource	4
web_services	4
agilent	3
apc	3
bim	3
biomarkers	3
chromatin	3
confounders	3
copa	3
cross-study	3
er-positive	3
evolution	3
glioblastoma	3
hapmap	3
interaction	3
loops	3
mage	3
mass_spec	3
micro_environment	3
mir192	3
ontologies	3
open-source	3
outlier	3
pca	3
pik3ca	3
pr	3
primer	3
roc	3
sage	3
small_molecule	3
sop	3
stability	3
stroma	3
svm	3
triple_negative	3
tutorial	3
web_server	3
wnt	3
20q	2
8q24	2
alignment	2
batch-effect	2
bcatenin	2
caching	2
cdk8	2
cell_cycle	2
cetuximab	2
chemo	2
compression	2
dfs	2
diagnostic	2
differential_expression	2
dna_damage	2
ephb	2
epigenetics	2
filtering	2
flow_cytometry	2
gene_fusion	2
guidelines	2
in-situ	2
letter	2
local_recurrence	2
low-level	2
luminal_subtype	2
lymphocytes	2
meeting_report	2
mir20a	2
mir215	2
mutual_information	2
ngs	2
oncomine	2
permutations	2
priors	2
projection	2
protein_microarray	2
protein_networks	2
qtl	2
ranked_lists	2
recommendation	2
rin	2
semi-supervised	2
serm	2
smad	2
snp_arrays	2
stageiii	2
sweave	2
target	2
tbfs	2
thyroid	2
translational	2
upd	2
web_resource	2
3utr	1
454	1
aging	1
akt	1
apoptosis	1
aroma	1
asco	1
assembly	1
association_studies	1
au-rich	1
aurora_kinase	1
bambi	1
bayesian	1
beads	1
biclustering	1
bmp	1
braf	1
brain_cancer	1
cables1	1
cancer_hallmarks	1
ccnd1	1
cervical_cancer	1
circulating_tumor_cells	1
cloud_computing	1
clusterin	1
concordance	1
cross-species	1
dasl	1
data_mining	1
dcc	1
dimension_reduction	1
disease	1
distance	1
driver_genes	1
dye_bias	1
early-stage	1
ecm	1
eno1	1
ensemble	1
ependymoma	1
erg	1
er-negative	1
est_analysis	1
estradiol	1
fantom	1
fgfr2	1
fish	1
formalization	1
formats	1
funding	1
gastric_cancer	1
gene_clusters	1
gene_function_prediction	1
gene_networks	1
genetics	1
genome_assembly	1
genoty	1
graph_approach	1
hypoxia	1
il8	1
in_situ_hybridization	1
invasion	1
latent	1
latex	1
markup	1
mcm7	1
melanoma	1
met	1
meta_analysis	1
metagene	1
microrna	1
mir101	1
mir-106b-25	1
mir126	1
mir135	1
mir143	1
mir145	1
mir155	1
mir15a	1
mir16-1	1
mir199	1
mir203	1
mir449	1
mirna221	1
mirna222	1
mirna_discovery	1
mixture_models	1
model-based	1
modules	1
mrna-seq	1
myb	1
neural_networks	1
news	1
nomogram	1
oncogene	1
oncogene_addiction	1
p21	1
pancreatic_cancer	1
passenger_genes	1
pattern_discovery	1
pbc	1
perturbation	1
pilot_study	1
plasma	1
power_analysis	1
prb	1
pre-post	1
python	1
randomization	1
rb	1
reproducibility	1
ret	1
rnai	1
rna-interference	1
sampling	1
selection_bias	1
shrna	1
signaling	1
simulation	1
single_cell	1
smad7	1
stem_cells	1
study_design	1
target_discovery	1
taxane	1
tcga	1
tissue_origin	1
translation	1
translocation	1
ucs	1
wiki	1
xml	1

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