CiteULike: jjray's Tawfik:DS [2 articles]

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	Chaperonin overexpression promotes genetic variation and enzyme evolution. [My Copy] Nature, Vol. 459, No. 7247. (4 June 2009), pp. 668-673. by Nobuhiko Tokuriki, Dan S. Tawfik posted to bacteria e_coli evolution protein_folding stability by jjray on 2009-06-03 21:33:24 as along with 3 people yyfwuhan absterga zwang
	Potential role of phenotypic mutations in the evolution of protein expression and stability [My Copy] Proceedings of the National Academy of Sciences (1 April 2009) by Moshe Goldsmith, Dan S. Tawfik posted to evolution gene_expression information phenotypic_mutation stability by jjray on 2009-04-02 15:43:28 as along with 2 people bpcusack gulsacan

bacteria	259
mathematical_model	255
gene_regulation	251
stochastic	198
signaling	153
evolution	141
mycobacterium_tuberculosis	139
noise	131
network	129
feedback	127
two-component_system	127
e_coli	114
biophysics	99
review	99
gene_expression	73
t_cell	60
immune_activation	59
biochemistry	55
method	55
transcription	55
bacillus_subtilis	53
tnf	53
murine_macrophage	51
chemokine	50
physics	49
chemotaxis	48
theory	47
robustness	43
network_motifs	38
nitric_oxide	38
metabolism	37
quantitative_data	37
systems_approach	37
sporulation	36
thermodynamics	35
bistability	33
spo0	33
dynamical_system	32
simulation	32
ifn-gamma	30
phopq	30
phosphorylation	30
regulatory_t_cell	30
development	29
human_macrophage	29
information	29
promoter	29
oscillation	28
granuloma	27
kinetics	27
synthetic_biology	26
transcriptional_regulation	26
nf-kappab	25
spatial	25
eukaryote	22
macrophage	22
dynamics	21
gillespie_algorithm	21
salmonella	21
yeast	21
biochemical_systems_theory	20
complexity	20
sigma_factor	20
cytokine	19
growth_rate	19
iron	19
positive_feedback	19
statistical_mechanics	18
apoptosis	17
evolutionary_dynamics	17
gene_order	17
mrna	17
non-equilibrium	17
opinion	17
sensitivity_analysis	17
toll-like_receptor	17
history	16
host-pathogen_interaction	16
human_monocyte	16
inos	16
bara	15
chromosome_organization	15
diffusion	15
mathematically_controlled_comparison	15
phenotypic_heterogeneity	15
adaptation	14
feedforward	14
game_theory	14
chemical_reaction	13
computation	13
crosstalk	13
design_principles	13
dna_binding	13
gene_network	13
immune_cell_kinetics	13
quantum_mechanics	13
csra	12
response_time	12
stability	12
translation	12
ccl5	11
energy	11
genetics	11
macrophage_activation	11
sensitivity	11
transcriptional_burst	11
ccl2	10
distribution	10
ecology	10
langevin	10
mathematics	10
neutrophil	10
optimization	10
stress_response	10
textbook	10
3-dimensional_structure	9
atp	9
lam	9
lps	9
modularity	9
mouse	9
mutation	9
population_genetics	9
recruitment	9
statistical_method	9
statistical_physics	9
brownian_motion	8
cooperativity	8
criticality	8
dna	8
frequency	8
human	8
hysteresis	8
immunology	8
lung	8
mathematical_biology	8
monte_carlo	8
neuroscience	8
operon	8
parameter	8
quorum_sensing	8
recombination	8
statistics	8
temporal_response	8
chaos	7
delay	7
entropy	7
enzyme	7
fokker-planck	7
intracellular	7
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protein_interactions	7
stem_cell	7
agent_based	6
bifurcation	6
canalization	6
conformational_dynamics	6
data_fitting	6
detailed_balance	6
drosophila	6
economics	6
evolvability	6
graph_theory	6
jf	6
large_deviations	6
macrophage_deactivation	6
multiscale	6
mycobacterium_bovis	6
phagosome	6
phenotype	6
philosophy_of_science	6
population	6
power_law	6
protein_folding	6
socs1	6
synergistic_signals	6
timescale	6
transcriptional_reprogramming	6
algorithm	5
biology_as_engineering	5
ergodic	5
fluid_flow	5
geometric	5
inflammation	5
mechanism	5
necrosis	5
pattern_formation	5
prokaryote	5
ratchet	5
receptor	5
rni	5
signaling_cascade	5
sos	5
stat1	5
tor	5
antagonist	4
bursting	4
cell_polarization	4
chemical_physics	4
commentary	4
cxcl9	4
cxcr3	4
degradation	4
dose_response	4
dynamic_range	4
editorial	4
epistasis	4
fitness_landscape	4
fluctuation-dissipation	4
genome	4
irf-1	4
kinetic_proofreading	4
latency	4
markov_chain	4
mutual_information	4
network_inference	4
pathogen_killing	4
persister	4
phylogeny	4
protein_binding	4
repressilator	4
shea-ackers	4
steady_state	4
synergistic	4
tau_leap	4
zero-order_ultrasensitivity	4
analysis	3
antibiotics	3
bayesian_inference	3
b_cell	3
book	3
ccr5	3
cell_cycle	3
cell_division	3
co-culture	3
competence	3
correlation	3
ctl	3
data	3
demand_theory	3
differential_equations	3
early_immunity	3
endothelium	3
extrinsic_noise	3
ferritin	3
flow_cytometry	3
foxp3	3
fractal	3
gibbs	3
hamiltonian	3
heat_shock	3
historical_contingency	3
lymphocyte	3
mode-of-control	3
mutational_entropy	3
neural_network	3
nucleus	3
phobr	3
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potential	3
probability	3
random_walk	3
rate	3
reaction-diffusion	3
receptor_binding	3
replicator_equation	3
roi	3
scale-free	3
shannon_entropy	3
siderophore	3
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single_cell	3
spin_glass	3
threshold_signal	3
timing	3
trade-off	3
tsc	3
adhesion_molecules	2
adiabatic_elimination	2
artificial_evolution	2
autocrine_paracrine	2
binding_constant	2
biological_uncertainty_principle	2
bliss_independence	2
boolean_network	2
bottleneck	2
brownian_dynamics	2
ccr2	2
cell_size	2
chemistry	2
chemokine_paradox	2
chromatin	2
convergent_evolution	2
cooperation	2
copy_number	2
cost-benefit	2
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database	2
deconvolution	2
dense_overlapping_regulon	2
dimerization	2
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endothelial_cell	2
es_cell	2
flexibility	2
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genetic_linkage	2
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hierarchy	2
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ider	2
intrinsic_protein_disorder	2
in_vitro	2
labile_iron_pool	2
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mammalian	2
microarray	2
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molecular_crowding	2
motif_compositions	2
mutational_robustness	2
nadph_phagocyte_oxidase	2
nonlinear	2
notes	2
nucleosome	2
numerical_methods	2
ornsteinuhlenbeck	2
overexpression	2
pde	2
periodic	2
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physical_chemistry	2
piecewise_power-law	2
poisson_process	2
polymer	2
proportion	2
rare_events	2
rat	2
rate_saturation	2
rat_macrophage	2
regulon	2
rrna	2
secretion	2
spectral	2
statistical_model	2
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strong_inference	2
survival_strategy	2
systems_biology	2
time_series	2
tumor	2
turbulence	2
type-1_ifn	2
ultrasensitivity	2
uncertainty_principle	2
writing	2
antibody	1
approximation	1
behavior	1
branching_process	1
causality	1
c_elegans	1
cell_turn_angle	1
cellular_automaton	1
clinical	1
codon_bias	1
coherent_coupling	1
component_relevance_ranking	1
convolution	1
cxcl11	1
cytochrome_oxidase	1
cytotoxic	1
dendritic_cell	1
deterministic	1
drift	1
eigenworm	1
elongation	1
endoplasmic_reticulum	1
equilibrium	1
ess	1
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falsification	1
fasl	1
fdr	1
filter	1
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gfp	1
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half-life	1
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il-10	1
il-12	1
il-2	1
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islets_of_langerhans	1
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lhs	1
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metropolis_rule	1
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migration	1
mitochondria	1
mixed_feedback	1
molecular_dynamics	1
motility	1
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mycobacteria	1
mycobacterium_marinum	1
mycobacterium_smegmatis	1
myd88	1
myosin	1
myxobacteria	1
neutral_evolution	1
nkt	1
non-human_primate	1
organization	1
overshoot	1
oxidative_stress	1
percolation	1
phase_coherence	1
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pleiotropy	1
potts_model	1
ppar-gamma	1
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protein_export	1
protein_function	1
proteome	1
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rapamycin	1
reciprocal_adaptation	1
refseq	1
relativity	1
ribosome	1
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series	1
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supercoiling	1
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symbolic_dynamics	1
szilard	1
tgfbeta	1
th1	1
time	1
transcriptional_attentuation	1
transendothelial_migration	1
triad	1
volume	1

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