jjray's signaling [153 articles] Export

Recent papers added to jjray's library classified by the tag signaling. You can also see everyone's signaling.

	Cross-Talk between Signaling Pathways Can Generate Robust Oscillations in Calcium and cAMP [My Copy] PLoS ONE, Vol. 4, No. 10. (21 October 2009), e7189. by Fernando Siso-Nadal, Jeffrey J. Fox, Stéphane A. Laporte, Terence E. Hébert, Peter S. Swain posted to signaling oscillation crosstalk biophysics by jjray on 2009-10-22 21:36:56 as
	Gated Narrow Escape Time for Molecular Signaling [My Copy] Physical Review Letters, Vol. 103, No. 14. (2009), 148102. by Jürgen Reingruber, David Holcman posted to signaling response_time diffusion by jjray on 2009-10-05 19:52:06 as along with 1 person coombs
	Maximum likelihood and the single receptor [My Copy] (25 Sep 2009) by Robert G. Endres, Ned S. Wingreen posted to signaling receptor physical_limit chemotaxis bacteria by jjray on 2009-09-28 20:13:34 as
	An epistatic ratchet constrains the direction of glucocorticoid receptor evolution [My Copy] Nature, Vol. 461, No. 7263. (24 September 2009), pp. 515-519. by Jamie T. Bridgham, Eric A. Ortlund, Joseph W. Thornton posted to signaling receptor ratchet historical_contingency evolution epistasis by jjray on 2009-09-28 17:09:49 as along with 9 people and 1 group venancio merpublic docv bpcusack cmzmasek zwang stajich Annab stevanspringer Mycology
	Global Analysis of Extracytoplasmic Stress Signaling in Escherichia coli [My Copy] PLoS Genet, Vol. 5, No. 9. (18 September 2009), e1000651. by Stéphanie Bury-Moné, Yanoura Nomane, Nancie Reymond, et al.Romain Barbet, Eric Jacquet, Sandrine Imbeaud, Annick Jacq, Philippe Bouloc posted to stress_response signaling e_coli bacteria by jjray on 2009-09-26 23:21:21 as
	Molecular Evolution of the Two-Component System BvgAS Involved in Virulence Regulation in Bordetella [My Copy] PLoS ONE, Vol. 4, No. 9. (14 September 2009), e6996. by Julien Herrou, Anne-Sophie Debrie, Eve Willery, et al.Geneviève Renaud-Mongénie, Camille Locht, Frits Mooi, Françoise Jacob-Dubuisson, Rudy Antoine posted to two-component_system signaling evolution by jjray on 2009-09-26 15:53:22 as
	Global Analysis of Cdk1 Substrate Phosphorylation Sites Provides Insights into Evolution [My Copy] Science, Vol. 325, No. 5948. (25 September 2009), pp. 1682-1686. by Liam J. Holt, Brian B. Tuch, Judit Villen, Alexander D. Johnson, Steven P. Gygi, David O. Morgan posted to signaling phosphorylation evolution by jjray on 2009-09-25 16:02:11 as along with 5 people nzm brianb walshtp djkt neils
	Positive Selection of Tyrosine Loss in Metazoan Evolution [My Copy] Science, Vol. 325, No. 5948. (25 September 2009), pp. 1686-1688. by Chris S. Tan, Adrian Pasculescu, Wendell A. Lim, Tony Pawson, Gary D. Bader, Rune Linding posted to signaling phosphorylation evolution by jjray on 2009-09-25 16:01:18 as along with 5 people and 2 groups nzm arjun_citeulike bpcusack djkt stajich Journal picks Mycology
	Noise and critical phenomena in biochemical signaling cycles at small molecule numbers [My Copy] Physical Review E, Vol. 80, No. 2. (August 2009), 021915. by C. Metzner, M. Sajitz-Hermstein, M. Schmidberger, B. Fabry posted to stochastic signaling phosphorylation noise criticality biophysics biochemistry by jjray on 2009-08-31 22:14:01 as along with 1 person cmetzner
	Role of Translational Coupling in Robustness of Bacterial Chemotaxis Pathway [My Copy] PLoS Biol, Vol. 7, No. 8. (18 August 2009), e1000171. by Linda Løvdok, Kajetan Bentele, Nikita Vladimirov, et al.Anette Müller, Ferencz S. Pop, Dirk Lebiedz, Markus Kollmann, Victor Sourjik posted to signaling robustness evolution chromosome_organization chemotaxis bacteria by jjray on 2009-08-25 17:31:36 as along with 2 people vladimirov biomcgary
	Structure and expression of the ompB operon, the regulatory locus for the outer membrane porin regulon in Salmonella typhimurium LT-21 [My Copy] Journal of Molecular Biology*, Vol. 201, No. 4. (June 1988), pp. 663-673. by P. Liljestrom posted to two-component_system signaling salmonella operon chromosome_organization bacteria by jjray on 2009-08-25 17:29:34 as
	Active dendrites enhance neuronal dynamic range [My Copy] PLoS Comput Biol, Vol. 5, No. 6. (8 Aug 2009), e1000402. by Leonardo L. Gollo, Osame Kinouchi, Mauro Copelli posted to signaling neuroscience dynamic_range by jjray on 2009-08-19 17:37:39 as
	Control and signal processing by transcriptional interference [My Copy] Mol Syst Biol, Vol. 5 (18 August 2009) by Antoine Buetti-Dinh, Rosemarie Ungricht, Janos Z. Kelemen, Chetak Shetty, Prasuna Ratna, Attila Becskei posted to transcriptional_regulation signaling network gene_regulation antagonist by jjray on 2009-08-19 16:58:07 as along with 1 person danmaclean
	Thermodynamic basis for the optimization of binding-induced biomolecular switches and structure-switching biosensors [My Copy] Proceedings of the National Academy of Sciences (5 August 2009) by Alexis Vallée-Bélisle, Francesco Ricci, Kevin W. Plaxco posted to biophysics conformational_dynamics optimization signaling thermodynamics by jjray on 2009-08-10 20:10:20 as along with 1 person kevinchannon
	Relation of Intracellular Signal Levels and Promoter Activities in the gal Regulon of Escherichia coli [My Copy] Journal of Molecular Biology (23 June 2009) by Sandeep Krishna, László Orosz, Kim Sneppen, Sankar Adhya, Szabolcs Semsey posted to bacteria e_coli gene_regulation mathematical_model metabolism operon signaling by jjray on 2009-08-10 17:36:51 as
	The two-component network and the general stress sigma factor RpoS (sigma S) in Escherichia coli. [My Copy] Advances in experimental medicine and biology, Vol. 631 (2008), pp. 40-53. by Regine Hengge posted to bacteria gene_regulation review signaling stress_response two-component_system by jjray on 2009-08-07 15:37:37 as
	Self-Organization of the Escherichia coli Chemotaxis Network Imaged with Super-Resolution Light Microscopy [My Copy] PLoS Biol, Vol. 7, No. 6. (23 June 2009), e1000137. by Derek Greenfield, Ann L. McEvoy, Hari Shroff, et al.Gavin E. Crooks, Ned S. Wingreen, Eric Betzig, Jan Liphardt posted to bacteria chemotaxis e_coli protein_interactions signaling by jjray on 2009-07-01 17:10:58 as along with 4 people tomd66 schmidtm robfsouza dbikard
	Positive Feedback Regulation Results in Spatial Clustering and Fast Spreading of Active Signaling Molecules on a Cell Membrane [My Copy] (29 Jun 2009) by Jayajit Das, Mehran Kardar, Arup K. Chakraborty posted to feedback positive_feedback signaling spatial by jjray on 2009-06-30 18:47:00 as
	Kinetic Buffering of Cross Talk between Bacterial Two-Component Sensors [My Copy] Journal of Molecular Biology, Vol. 390, No. 3. (17 July 2009), pp. 380-393. by Eli S. Groban, Elizabeth J. Clarke, Howard M. Salis, Susan M. Miller, Christopher A. Voigt posted to bacteria crosstalk signaling two-component_system by jjray on 2009-06-30 16:08:58 as along with 1 person and 1 group orr KeatingJClub
	An externally tunable bacterial band-pass filter. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 106, No. 25. (23 June 2009), pp. 10135-10140. by T. Sohka, R. A. Heins, R. M. Phelan, J. M. Greisler, C. A. Townsend, M. Ostermeier posted to bacteria filter signaling synthetic_biology by jjray on 2009-06-26 17:53:22 as along with 4 people dbikard Vincent_Rouilly austin adampah
	Engineering key components in a synthetic eukaryotic signal transduction pathway [My Copy] Mol Syst Biol, Vol. 5 (19 May 2009) by Mauricio S. Antunes, Kevin J. Morey, Neera Tewari-Singh, et al.Tessa A. Bowen, Jeff J. Smith, Colleen T. Webb, Homme W. Hellinga, June I. Medford posted to gene_regulation signaling synthetic_biology two-component_system by jjray on 2009-06-19 17:10:14 as along with 2 people and 1 group grahamc reyez ParkinsonLab_at_MaRS
	Remarks on Feedforward Circuits, Adaptation, and Pulse Memory [My Copy] (7 Jun 2009) by Eduardo D. Sontag posted to biochemistry biophysics feedforward mathematical_model network signaling by jjray on 2009-06-09 17:11:03 as
	Diffusion, dimensionality, and noise in transcriptional regulation [My Copy] Physical Review E (Statistical, Nonlinear, and Soft Matter Physics), Vol. 79, No. 5. (2009), 051901. by Gasper Tkacik, William Bialek posted to biophysics diffusion dna_binding gene_regulation noise signaling stochastic by jjray on 2009-05-29 22:12:19 as along with 2 people cjryan kumar_physics
	Mutual Information between Input and Output Trajectories of Biochemical Networks [My Copy] Physical Review Letters, Vol. 102, No. 21. (2009), 218101. by Filipe Tostevin, Pieter R. ten Wolde posted to bacteria biochemistry chemotaxis e_coli information network signaling by jjray on 2009-05-29 20:33:51 as
	Differential Affinity and Catalytic Activity of CheZ in <italic>E. coli</italic> Chemotaxis [My Copy] PLoS Comput Biol, Vol. 5, No. 5. (8 May 2009), e1000378. by Siebe B. van Albada, Pieter R. ten Wolde edited by Christopher Rao posted to bacteria chemotaxis e_coli phosphorylation signaling two-component_system by jjray on 2009-05-29 16:44:25 as
	What Is Stochastic Resonance? Definitions, Misconceptions, Debates, and Its Relevance to Biology [My Copy] PLoS Comput Biol, Vol. 5, No. 5. (29 May 2009), e1000348. by Mark D. Mcdonnell, Derek Abbott posted to neuroscience noise review signaling stochastic stochastic_resonance by jjray on 2009-05-29 16:42:44 as along with 14 people iml bertelsen sylvain_chevallier fccoelho thegoose Gorzomagnificent reyez bayesian trfield flips kentsis fgibson marekrud GeeSharpMinor
	Information processing and signal integration in bacterial quorum sensing [My Copy] (25 May 2009) by Pankaj Mehta, Sidhartha Goyal, Tao Long, Bonnie Bassler, Ned S. Wingreen posted to bacteria information mathematical_model quorum_sensing signaling by jjray on 2009-05-29 16:18:09 as
	Non-genetic origins of cell-to-cell variability in TRAIL-induced apoptosis. [My Copy] Nature, Vol. 459, No. 7245. (21 May 2009), pp. 428-432. by Sabrina L. Spencer, Suzanne Gaudet, John G. Albeck, John M. Burke, Peter K. Sorger posted to apoptosis eukaryote phenotypic_heterogeneity signaling stochastic by jjray on 2009-05-25 16:24:26 as along with 8 people gabrieljoelmitchell fenghezi dswan leliavski gbloeb absterga brianb songpku
	Phosphatases modulate the bistable sporulation gene expression pattern in Bacillus subtilis [My Copy] Molecular Microbiology, Vol. 56, No. 6. (June 2005), pp. 1481-1494. by Jan-Willem Veening, Leendert W. Hamoen, Oscar P. Kuipers posted to bacillus_subtilis bacteria bistability signaling spo0 sporulation by jjray on 2009-05-08 23:17:27 as along with 2 people Winzer margaritis
	Autoregulation of antibiotic biosynthesis by binding of the end product to an atypical response regulator [My Copy] Proceedings of the National Academy of Sciences (7 May 2009) by Linqi Wang, Xiuyun Tian, Juan Wang, et al.Haihua Yang, Keqiang Fan, Gangming Xu, Keqian Yang, Huarong Tan posted to antibiotics bacteria feedback signaling two-component_system by jjray on 2009-05-08 16:59:28 as
	Mutual information between in- and output trajectories of biochemical networks [My Copy] (4 Jan 2009) by Filipe Tostevin, Pieter posted to bacteria biochemistry e_coli information mutual_information network signaling by jjray on 2009-05-07 16:22:56 as along with 1 person akraemer
	Tuning the Activation Threshold of a Kinase Network by Nested Feedback Loops [My Copy] Science, Vol. 324, No. 5926. (24 April 2009), pp. 509-512. by Quincey A. Justman, Zach Serber, James E. Ferrell, Hana El-Samad, Kevan M. Shokat posted to bistability cell_division feedback mathematical_model signaling by jjray on 2009-04-24 18:44:44 as along with 4 people erel10 biomcgary renatomilani jbhiatt
	Complexity in bacterial cell–cell communication: Quorum signal integration and subpopulation signaling in the Bacillus subtilis phosphorelay [My Copy] Proceedings of the National Academy of Sciences (20 April 2009) by Ilka B. Bischofs, Joshua A. Hug, Aiwen W. Liu, Denise M. Wolf, Adam P. Arkin posted to bacillus_subtilis bacteria complexity quorum_sensing signaling sporulation by jjray on 2009-04-21 17:07:04 as along with 4 people trfield coela kalvala Winzer
	Features of Protein–Protein Interactions in Two‐Component Signaling Deduced from Genomic Libraries [My Copy] Methods in Enzymology, Vol. 422 (2007), pp. 75-101. by Robert A. White, Hendrik Szurmant, James A. Hoch, Terence Hwa posted to bacteria crosstalk information signaling two-component_system by jjray on 2009-04-20 23:10:27 as along with 3 people qluo Sjitprasutwit cjeans
	Synergistic Kinetic Interactions between Components of the Phosphorelay Controlling Sporulation in Bacillus subtilis† [My Copy] Biochemistry, Vol. 37, No. 5. (1 February 1998), pp. 1365-1375. by Charles E. Grimshaw, Shaoming Huang, Conrad G. Hanstein, et al.Mark A. Strauch, David Burbulys, Ling Wang, James A. Hoch, John M. Whiteley posted to bacillus_subtilis bacteria quantitative_data signaling spo0 sporulation by jjray on 2009-04-20 23:02:20 as
	Scale-free distribution of molecule numbers in signaling cycles [My Copy] (6 Apr 2009) by C. Metzner, M. Sajitz-Hermstein, M. Schmidberger, B. Fabry posted to biophysics distribution network scale-free signaling stochastic by jjray on 2009-04-20 18:36:15 as
	Newcomer insulin secretory granules as a highly calcium-sensitive pool [My Copy] Proceedings of the National Academy of Sciences (16 April 2009) by Morten G. Pedersen, Arthur Sherman posted to mathematical_biology mathematical_model secretion signaling by jjray on 2009-04-17 16:27:18 as
	Synchronization and clustering of synthetic genetic networks: A role for cis-regulatory modules [My Copy] (3 Apr 2009) by Jiajun Zhang, Zhanjiang Yuan, Tianshou Zhou posted to gene_regulation mathematical_model mode-of-control signaling by jjray on 2009-04-13 18:44:06 as
	Random Signal Fluctuations Can Reduce Random Fluctuations in Regulated Components of Chemical Regulatory Networks [My Copy] Physical Review Letters, Vol. 84, No. 23. (Jun 2000), pp. 5447-5450. by Johan Paulsson, Måns Ehrenberg posted to feedback gillespie_algorithm network signaling stochastic by jjray on 2009-04-07 17:42:27 as along with 1 person and 1 group joseph_x_zhou bioNetwork_sysBio
	Quantifying the Integration of Quorum-Sensing Signals with Single-Cell Resolution [My Copy] PLoS Biol, Vol. 7, No. 3. (24 March 2009), e1000068. by Tao Long, Kimberly C. Tu, Yufang Wang, et al.Pankaj Mehta, N. P. Ong, Bonnie L. Bassler, Ned S. Wingreen posted to bacteria mathematical_model noise quorum_sensing signaling single_cell by jjray on 2009-03-31 20:43:14 as along with 3 people elifsu trfield biomcgary
	Network motifs: structure does not determine function. [My Copy] BMC genomics, Vol. 7, No. 1. (2006), 108. by Piers J. Ingram, Michael P. Stumpf, Jaroslav Stark posted to network network_motifs signaling by jjray on 2009-03-25 02:49:03 as along with 3 people jknabe isotelesis Borelli
	Functions of bifans in context of multiple regulatory motifs in signaling networks. [My Copy] Biophysical journal, Vol. 94, No. 7. (1 April 2008), pp. 2566-2579. by A. Lipshtat, S. P. Purushothaman, R. Iyengar, A. Ma'ayan posted to eukaryote network network_motifs signaling by jjray on 2009-03-25 02:48:30 as
	Phosphorylation of nitrogen regulator I (NRI) of Escherichia coli. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 85, No. 23. (December 1988), pp. 8919-8923. by V. Weiss, B. Magasanik posted to bacteria e_coli phosphorylation signaling two-component_system by jjray on 2009-03-18 20:26:17 as
	Dynamic Properties of Network Motifs Contribute to Biological Network Organization. [My Copy] PLoS Biol, Vol. 3, No. 11. (4 October 2005) by Robert J J. Prill, Pablo A A. Iglesias, Andre Levchenko posted to dynamical_system dynamics gene_regulation network network_motifs signaling stability by jjray on 2009-03-06 19:02:52 as along with 12 people and 1 group jporternj tmmurali monod textoris bayesian luispedro xinian jdiggans phoenixzxl watson stefanoallesina marck NeuralNetworks
	Signaling Cascades Modulate the Speed of Signal Propagation through Space [My Copy] PLoS ONE, Vol. 4, No. 2. (27 February 2009), e4639. by Christopher C. Govern, Arup K. Chakraborty posted to mathematical_model response_time signaling signaling_cascade spatial zero-order_ultrasensitivity by jjray on 2009-03-04 20:48:41 as along with 2 people cjryan trfield
	Cell signaling can direct either binary or graded transcriptional responses. [My Copy] The EMBO journal, Vol. 20, No. 12. (15 June 2001), pp. 3167-3176. by S. R. Biggar, G. R. Crabtree posted to bistability criticality feedback gene_regulation network oscillation signaling by jjray on 2009-03-03 20:47:37 as
	Dynamic map of protein interactions in the Escherichia coli chemotaxis pathway [My Copy] Mol Syst Biol, Vol. 5 (20 January 2009) by David Kentner, Victor Sourjik posted to bacteria chemotaxis e_coli protein_binding signaling by jjray on 2009-02-18 17:46:08 as along with 1 person brianb
	Two-Component Signal Transduction Pathways Regulating Growth and Cell Cycle Progression in a Bacterium: A System-Level Analysis. [My Copy] PLoS Biol, Vol. 3, No. 10. (27 September 2005) by Jeffrey M M. Skerker, Melanie S S. Prasol, Barrett S S. Perchuk, Emanuele G G. Biondi, Michael T T. Laub posted to bacteria signaling two-component_system by jjray on 2009-02-12 23:18:55 as along with 4 people Sjitprasutwit bjorns balajis comb
	Rewiring the Specificity of Two-Component Signal Transduction Systems [My Copy] Cell, Vol. 133, No. 6. (13 June 2008), pp. 1043-1054. by Jeffrey M. Skerker, Barrett S. Perchuk, Albert Siryaporn, et al.Emma A. Lubin, Orr Ashenberg, Mark Goulian, Michael T. Laub posted to bacteria signaling two-component_system by jjray on 2009-02-12 23:16:22 as along with 4 people mgomes robfsouza RebeccaHamer friendpine
	Phosphorylation of three proteins in the signaling pathway of bacterial chemotaxis. [My Copy] Cell, Vol. 53, No. 1. (8 April 1988), pp. 79-87. by J. F. Hess, K. Oosawa, N. Kaplan, M. I. Simon posted to bacteria chemotaxis phosphorylation signaling two-component_system by jjray on 2009-02-03 19:30:21 as

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bacteria	260
mathematical_model	256
gene_regulation	251
stochastic	198
signaling	153
evolution	141
mycobacterium_tuberculosis	139
noise	131
network	129
feedback	127
two-component_system	127
e_coli	114
biophysics	101
review	99
gene_expression	73
t_cell	60
immune_activation	59
biochemistry	56
method	56
transcription	55
bacillus_subtilis	54
tnf	53
murine_macrophage	51
chemokine	50
physics	50
chemotaxis	48
theory	48
robustness	43
network_motifs	38
nitric_oxide	38
metabolism	37
quantitative_data	37
sporulation	37
systems_approach	37
thermodynamics	36
bistability	33
spo0	33
dynamical_system	32
simulation	32
ifn-gamma	30
phopq	30
phosphorylation	30
regulatory_t_cell	30
development	29
human_macrophage	29
information	29
promoter	29
kinetics	28
oscillation	28
granuloma	27
synthetic_biology	26
transcriptional_regulation	26
nf-kappab	25
spatial	25
eukaryote	22
macrophage	22
dynamics	21
gillespie_algorithm	21
salmonella	21
yeast	21
biochemical_systems_theory	20
complexity	20
sigma_factor	20
cytokine	19
growth_rate	19
iron	19
positive_feedback	19
statistical_mechanics	19
non-equilibrium	18
apoptosis	17
evolutionary_dynamics	17
gene_order	17
mrna	17
opinion	17
sensitivity_analysis	17
toll-like_receptor	17
diffusion	16
history	16
host-pathogen_interaction	16
human_monocyte	16
inos	16
bara	15
chromosome_organization	15
mathematically_controlled_comparison	15
phenotypic_heterogeneity	15
adaptation	14
feedforward	14
game_theory	14
chemical_reaction	13
computation	13
crosstalk	13
design_principles	13
dna_binding	13
gene_network	13
immune_cell_kinetics	13
quantum_mechanics	13
csra	12
response_time	12
stability	12
translation	12
ccl5	11
energy	11
genetics	11
macrophage_activation	11
sensitivity	11
transcriptional_burst	11
ccl2	10
distribution	10
ecology	10
langevin	10
mathematics	10
mutation	10
neutrophil	10
optimization	10
stress_response	10
textbook	10
3-dimensional_structure	9
atp	9
dna	9
lam	9
lps	9
modularity	9
mouse	9
population_genetics	9
recruitment	9
statistical_method	9
statistical_physics	9
brownian_motion	8
cooperativity	8
criticality	8
entropy	8
frequency	8
human	8
hysteresis	8
immunology	8
lung	8
mathematical_biology	8
monte_carlo	8
neuroscience	8
operon	8
parameter	8
quorum_sensing	8
recombination	8
statistics	8
temporal_response	8
chaos	7
delay	7
enzyme	7
fokker-planck	7
intracellular	7
phagocytosis	7
protein_interactions	7
stem_cell	7
agent_based	6
bifurcation	6
canalization	6
conformational_dynamics	6
data_fitting	6
detailed_balance	6
drosophila	6
economics	6
evolvability	6
graph_theory	6
jf	6
large_deviations	6
macrophage_deactivation	6
multiscale	6
mycobacterium_bovis	6
phagosome	6
phenotype	6
philosophy_of_science	6
population	6
power_law	6
protein_folding	6
socs1	6
synergistic_signals	6
timescale	6
transcriptional_reprogramming	6
algorithm	5
biology_as_engineering	5
ergodic	5
fluid_flow	5
geometric	5
inflammation	5
mechanism	5
necrosis	5
pattern_formation	5
prokaryote	5
ratchet	5
receptor	5
rni	5
signaling_cascade	5
sos	5
stat1	5
tor	5
antagonist	4
bursting	4
cell_polarization	4
chemical_physics	4
commentary	4
cxcl9	4
cxcr3	4
degradation	4
dose_response	4
dynamic_range	4
editorial	4
epistasis	4
fitness_landscape	4
fluctuation-dissipation	4
genome	4
irf-1	4
kinetic_proofreading	4
latency	4
markov_chain	4
mutual_information	4
network_inference	4
pathogen_killing	4
persister	4
phylogeny	4
protein_binding	4
rate	4
repressilator	4
shea-ackers	4
steady_state	4
synergistic	4
tau_leap	4
zero-order_ultrasensitivity	4
analysis	3
antibiotics	3
bayesian_inference	3
b_cell	3
book	3
ccr5	3
cell_cycle	3
cell_division	3
co-culture	3
competence	3
correlation	3
ctl	3
data	3
demand_theory	3
differential_equations	3
early_immunity	3
endothelium	3
extrinsic_noise	3
ferritin	3
flow_cytometry	3
foxp3	3
fractal	3
gibbs	3
hamiltonian	3
heat_shock	3
historical_contingency	3
lymphocyte	3
mode-of-control	3
mutational_entropy	3
neural_network	3
nucleus	3
phobr	3
physical_limit	3
potential	3
probability	3
random_walk	3
reaction-diffusion	3
receptor_binding	3
replicator_equation	3
roi	3
scale-free	3
shannon_entropy	3
siderophore	3
signal_specificity	3
single_cell	3
spin_glass	3
threshold_signal	3
timing	3
trade-off	3
tsc	3
adhesion_molecules	2
adiabatic_elimination	2
artificial_evolution	2
autocrine_paracrine	2
binding_constant	2
biological_uncertainty_principle	2
bliss_independence	2
boolean_network	2
bottleneck	2
brownian_dynamics	2
ccr2	2
cell_size	2
chemistry	2
chemokine_paradox	2
chromatin	2
convergent_evolution	2
cooperation	2
copy_number	2
cost-benefit	2
cytoplasm	2
database	2
deconvolution	2
dense_overlapping_regulon	2
dimerization	2
dual_feedback_motif	2
endothelial_cell	2
es_cell	2
flexibility	2
fluorescence	2
fragility	2
genetic_linkage	2
global_regulator	2
goldbeter-koshland	2
hierarchy	2
horizontal_gene_transfer	2
ider	2
intrinsic_protein_disorder	2
in_vitro	2
labile_iron_pool	2
macrodomain	2
macrophage_mtb_moi_upper_limit	2
mammalian	2
microarray	2
microenvironment	2
molecular_crowding	2
motif_compositions	2
mutational_robustness	2
nadph_phagocyte_oxidase	2
nonlinear	2
notes	2
nucleosome	2
numerical_methods	2
ornsteinuhlenbeck	2
overexpression	2
pde	2
periodic	2
photosynthesis	2
physical_chemistry	2
piecewise_power-law	2
poisson_process	2
polymer	2
proportion	2
rare_events	2
rat	2
rate_saturation	2
rat_macrophage	2
regulon	2
rrna	2
secretion	2
spectral	2
statistical_model	2
statistical_sensitivity	2
strong_inference	2
survival_strategy	2
systems_biology	2
time_series	2
tumor	2
turbulence	2
type-1_ifn	2
ultrasensitivity	2
uncertainty_principle	2
writing	2
antibody	1
approximation	1
astrobiology	1
behavior	1
branching_process	1
causality	1
c_elegans	1
cell_turn_angle	1
cellular_automaton	1
clinical	1
codon_bias	1
coherent_coupling	1
component_relevance_ranking	1
convolution	1
cxcl11	1
cytochrome_oxidase	1
cytotoxic	1
dendritic_cell	1
deterministic	1
dna_replication	1
drift	1
eigenworm	1
elongation	1
endoplasmic_reticulum	1
equilibrium	1
ess	1
estimation	1
falsification	1
fasl	1
fdr	1
filter	1
focal_secretion	1
formyl_peptides	1
free_energy	1
genetic_variation	1
gfp	1
gradient	1
granular_dynamics	1
group_selection	1
half-life	1
hilbert_space	1
hiv	1
homeostatic_circuit	1
hormesis	1
il-10	1
il-12	1
il-2	1
induction	1
infliximab	1
inhertiance	1
iron_percent_acquisition	1
islets_of_langerhans	1
just-in-time	1
kinetic_insulation	1
kolmogorov_complexity	1
kolmogorov-smirnov	1
laplace_transform	1
lattice	1
leishmania_major	1
lhs	1
limit_cycle	1
lip	1
lipid_domain	1
localization	1
lymph_node	1
manhattan_project	1
mass-action	1
maximum_likelihood	1
memristor	1
met-leu-phe	1
metropolis-hastings	1
metropolis_rule	1
michaelis-menten	1
microfluidics	1
migration	1
mitochondria	1
mixed_feedback	1
molecular_dynamics	1
motility	1
mtsa-10	1
multimerization	1
mycobacteria	1
mycobacterium_marinum	1
mycobacterium_smegmatis	1
myd88	1
myosin	1
myxobacteria	1
neutral_evolution	1
nkt	1
non-human_primate	1
organization	1
overshoot	1
oxidative_stress	1
percolation	1
phase_coherence	1
phase_transition	1
phenotypic_mutation	1
philosophy	1
pleiotropy	1
potts_model	1
ppar-gamma	1
propensity	1
proteasome	1
protein_export	1
protein_function	1
proteome	1
quantitative_response	1
quantum_field_theory	1
rapamycin	1
reciprocal_adaptation	1
refseq	1
relativity	1
ribosome	1
rna	1
sampling	1
sde	1
series	1
siphon	1
sirna	1
smoluchowski_diffusion	1
speculation	1
stochastic_resonance	1
stoichiometry	1
substrate_competition	1
supercoiling	1
superoxide	1
superstatistics	1
symbolic_dynamics	1
szilard	1
tgfbeta	1
th1	1
time	1
transcriptional_attentuation	1
transendothelial_migration	1
triad	1
volume	1

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