jlike's library 25 articles Export

	Improved human disease candidate gene prioritization using mouse phenotype [My Copy] BMC Bioinformatics, Vol. 8, No. 1. (2007), 392. by Jing Chen, Huan Xu, Bruce Aronow, Anil Jegga posted to prioritization disease_gene disease data_integration candidate_gene_analysis candidate abstracts by jlike on 2009-11-03 11:42:53 as along with 4 people daforerog jeremymiller guhjy barriot
	Exploiting structural and topological information to improve prediction of RNA-protein binding sites. [My Copy] BMC bioinformatics, Vol. 10, No. 1. (18 October 2009), 341. by Stefan R. Maetschke, Zheng Yuan posted to sites rna protein prediction motif binding by jlike on 2009-10-23 14:05:03 as along with 3 people and 1 group sillitoe reyez heliopais Orengo Group Journal Picks
	A multi-dimensional evidence-based candidate gene prioritization approach for complex diseases-schizophrenia as a case [My Copy] Bioinformatics, Vol. 25, No. 19. (1 October 2009), pp. 2595-6602. by Jingchun Sun, Peilin Jia, Ayman H. Fanous, et al.Bradley T. Webb, Edwin J. C. G. van den Oord, Xiangning Chen, Jozsef Bukszar, Kenneth S. Kendler, Zhongming Zhao posted to schizophrenia prioritization gene disease candidate by jlike on 2009-10-23 13:58:42 as along with 4 people rdiaz natstreet daforerog guhjy
	A new method for revealing correlated mutations under the structural and functional constraints in proteins [My Copy] Bioinformatics, Vol. 25, No. 19. (1 October 2009), pp. 2506-2513. by Byung-Chul Lee, Dongsup Kim posted to mutation multiple evolution correlation alignment by jlike on 2009-10-23 13:57:05 as along with 5 people RebeccaHamer qluo operon zwang phoenixzxl
	A comprehensive framework of E2\|[ndash]\|RING E3 interactions of the human ubiquitin\|[ndash]\|proteasome system [My Copy] Molecular Systems Biology, Vol. 5 (18 August 2009) by Sjoerd J. L. van Wijk, Sjoerd J. de Vries, Patrick Kemmeren, et al.Anding Huang, Rolf Boelens, Alexandre M. J. J. Bonvin, Timmers posted to y2h ubiquitin proteasome e3 e2 by jlike on 2009-10-23 13:45:37 as
	Neuroscience in the era of functional genomics and systems biology [My Copy] Nature, Vol. 461, No. 7266. (14 October 2009), pp. 908-915. by Daniel H. Geschwind, Genevieve Konopka posted to systems review neuroscience biology by jlike on 2009-10-19 15:21:31 as along with 3 people and 1 group robertrentzsch daforerog ckemere Orengo Group Journal Picks
	Quantifying similarity between motifs [My Copy] Genome Biology, Vol. 8, No. 2. (26 February 2007), R24. by Shobhit Gupta, John Stamatoyannopoulos, Timothy Bailey, William Noble posted to similarity motif by jlike on 2009-10-19 15:13:42 as along with 6 people and 1 group Dulce maximilianh cwbrown grahamc nklee gracio EisenLab
	MEME SUITE: tools for motif discovery and searching [My Copy] Nucl. Acids Res., Vol. 37, No. suppl_2. (1 July 2009), pp. W202-208. by Timothy L. Bailey, Mikael Boden, Fabian A. Buske, et al.Martin Frith, Charles E. Grant, Luca Clementi, Jingyuan Ren, Wilfred W. Li, William S. Noble posted to motif discovery bioinformatics by jlike on 2009-10-19 14:57:24 as along with 6 people suizifish maximilianh natstreet idonaldson nuin cassj
	The value of prior knowledge in discovering motifs with MEME [My Copy] Vol. 3 (1995), pp. 21-29. by T. L. Bailey, C. Elkan posted to motif discovery by jlike on 2009-10-19 11:27:15 as
	Cluster-Buster: finding dense clusters of motifs in DNA sequences [My Copy] Vol. 31 (2003), pp. 3666-3668. by M. C. Frith, M. C. Li, Z. Weng posted to tfbs motifs enrichment dna clusters by jlike on 2009-10-19 11:26:44 as
	MATCH: a tool for searching transcription factor binding sites in DNA sequences [My Copy] Vol. 31 (2003), pp. 3576-3579. by A. E. Kel posted to tfbs motif_search dna by jlike on 2009-10-19 11:26:44 as
	TRANSFAC: a database on transcription factors and their DNA binding sites [My Copy] Vol. 24 (1996), pp. 238-241. by E. Wingender, P. Dietze, H. Karas, R. Knuppel posted to no-tag by jlike on 2009-10-19 11:26:44 as
	TRANSFAC, TRANSPATH and CYTOMER as starting points for an ontology of regulatory networks [My Copy] Vol. 4 (2004), pp. 55-61. by E. Wingender posted to no-tag by jlike on 2009-10-19 11:26:44 as
	Regulatory sequence analysis tools [My Copy] Vol. 31 (2003), pp. 3593-3596. by J. van Helden posted to no-tag by jlike on 2009-10-19 11:26:44 as
	The KEGG databases at GenomeNet [My Copy] Vol. 30 (2002), pp. 42-46. by M. Kanehisa, S. Goto, S. Kawashima, A. Nakaya posted to no-tag by jlike on 2009-10-19 11:26:24 as
	Cytoscape: a software environment for integrated models of biomolecular interaction networks [My Copy] Vol. 13 (2003), pp. 2498-2504. by P. Shannon posted to no-tag by jlike on 2009-10-19 11:26:24 as
	Analyzing multiple data sets by interconnecting RSAT programs via SOAP Web services-an example with ChIP-chip data [My Copy] (2008) by O. Sand, M. Thomas-Chollier, E. Vervisch, J. van Helden posted to no-tag by jlike on 2009-10-19 11:26:24 as
	Bioconductor: an open source framework for bioinformatics and computational biology [My Copy] Vol. 411 (2006), pp. 119-134. by M. Reimers, V. J. Carey posted to no-tag by jlike on 2009-10-19 11:25:49 as
	JASPAR: an open-access database for eukaryotic transcription factor binding profiles [My Copy] Vol. 32 (2004), pp. D91-D94. by A. Sandelin, W. Alkema, P. Engstrom, W. W. Wasserman, B. Lenhard posted to no-tag by jlike on 2009-10-19 11:25:49 as
	A new generation of JASPAR, the open-access repository for transcription factor binding site profiles [My Copy] Vol. 34 (2006), pp. D95-D97. by D. Vlieghe posted to no-tag by jlike on 2009-10-19 11:25:49 as
	Using RSAT oligo-analysis and dyad-analysis tools to discover regulatory signals in nucleic sequences [My Copy] (2008) by M. Defrance, R. Janky, O. Sand, J. van Helden posted to no-tag by jlike on 2009-10-19 11:25:48 as
	Using RSAT to scan genome sequences for transcription factor binding sites and cis-regulatory modules [My Copy] (2008) by J. V. Turatsinze, M. Thomas-Chollier, M. Defrance, J. van Helden posted to no-tag by jlike on 2009-10-19 11:24:49 as
	RSAT: regulatory sequence analysis tools [My Copy] Vol. 36 (2008), pp. W119-W127. by M. Thomas-Chollier posted to no-tag by jlike on 2009-10-19 11:24:49 as
	Disease-Aging Network Reveals Significant Roles of Aging Genes in Connecting Genetic Diseases [My Copy] PLoS Comput Biol, Vol. 5, No. 9. (25 September 2009), e1000521. by Jiguang Wang, Shihua Zhang, Yong Wang, Luonan Chen, Xiang-Sun Zhang posted to network genetic diseases aging by jlike on 2009-10-13 10:42:13 as along with 4 people smichan mkotlyar grahamc daforerog
	MedlineRanker: flexible ranking of biomedical literature [My Copy] Nucl. Acids Res., Vol. 37, No. suppl_2. (1 July 2009), pp. W141-146. by Jean-Fred Fontaine, Adriano Barbosa-Silva, Martin Schaefer, Matthew R. Huska, Enrique M. Muro, Miguel A. Andrade-Navarro posted to text mining medline classification bayes abstracts by jlike on 2009-10-06 15:07:37 as along with 4 people daforerog giorgiobertin liblab guhjy

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motif	4
abstracts	2
disease	2
discovery	2
tfbs	2
dna	2
prioritization	2
candidate	2
enrichment	1
disease_gene	1
y2h	1
e3	1
text	1
medline	1
review	1
neuroscience	1
protein	1
multiple	1
classification	1
biology	1
evolution	1
proteasome	1
gene	1
network	1
correlation	1
rna	1
bayes	1
similarity	1
mutation	1
data_integration	1
sites	1
ubiquitin	1
bioinformatics	1
systems	1
alignment	1
mining	1
binding	1
e2	1
aging	1
motifs	1
prediction	1
genetic	1
motif_search	1
clusters	1
schizophrenia	1
diseases	1
candidate_gene_analysis	1

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