jmuhlich's ontology [19 articles] Export

Recent papers added to jmuhlich's library classified by the tag ontology. You can also see everyone's ontology.

	'Omics Data Sharing [My Copy] Science, Vol. 326, No. 5950. (9 October 2009), pp. 234-236. by Dawn Field, Susanna-Assunta Sansone, Amanda Collis, et al.Tim Booth, Peter Dukes, Susan K. Gregurick, Karen Kennedy, Patrik Kolar, Eugene Kolker, Mary Maxon, Sian Millard, Alexis-Michel Mugabushaka, Nicola Perrin, Jacques E. Remacle, Karin Remington, Philippe Rocca-Serra, Chris F. Taylor, Mark Thorley, Bela Tiwari, John Wilbanks posted to sbwiki ontology mi informatics by jmuhlich on 2009-10-23 18:54:46 as along with 10 people and 3 groups perkeo druvus dullhunk shigepong ppgardne reyez daforerog allysonlister applebyb jago Journal picks Integrative Expertise for Global Health Convention on Knowledge Commons
	Standards and ontologies in computational systems biology. [My Copy] Essays in biochemistry, Vol. 45 (2008), pp. 211-222. by Herbert M. Sauro, Frank T. Bergmann posted to sbwiki sbml ontology miriam annotation by jmuhlich on 2009-10-21 19:16:06 as along with 2 people jonathancooper bertelsen
	Biological knowledge management: the emerging role of the Semantic Web technologies [My Copy] Brief Bioinform, Vol. 10, No. 4. (1 July 2009), pp. 392-407. by Erick Antezana, Martin Kuiper, Vladimir Mironov posted to semiotics semantic sbwiki ontology knowledge_management by jmuhlich on 2009-10-15 23:05:54 as along with 15 people jfr guhjy artaban421 cmzmasek pharmdoc lmichan bertelsen kshameer sobolevnrm dansullivanblk allysonlister mikel_egana dullhunk fgibson druvus
	Minimum information requested in the annotation of biochemical models (MIRIAM) [My Copy] Nature Biotechnology, Vol. 23, No. 12. (06 December 2005), pp. 1509-1515. by Nicolas L. Novere, Andrew Finney, Michael Hucka, et al.Upinder S. Bhalla, Fabien Campagne, Julio Collado-Vides, Edmund J. Crampin, Matt Halstead, Edda Klipp, Pedro Mendes, Poul Nielsen, Herbert Sauro, Bruce Shapiro, Jacky L. Snoep, Hugh D. Spence, Barry L. Wanner posted to sbwiki sbml ontology model annotation by jmuhlich on 2009-09-09 23:53:12 as along with 16 people and 2 groups mtaschuk perkeo irenas bertelsen moonhouse schwartzjmc tjtaylor Vincent_Rouilly allysonlister michaelbarton subhacom dullhunk dagmar lenov pmendes leilaperie dIEMoSIRIS compneur
	Annotation of SBML Models Through Rule-Based Semantic Integration [My Copy] In The 12th Annual Bio-Ontologies Meeting, ISMB 2009 (28 June 2009), 49. by Allyson L. Lister, Phillip Lord, Matthew Pocock, Anil Wipat edited by Phillip Lord, Susanna-Assunta Sansone, Nigam Shah, Susie Stephens, Larisa Soldatova posted to sbwiki sbml ontology model informatics by jmuhlich on 2009-09-08 23:20:51 as along with 1 person allysonlister
	Opening, Closing Worlds - On Integrity Constraints [My Copy] In OWL: Experiences and Directions 2008 (26 October 2008) by Evren Sirin, Michael Smith, Evan Wallace edited by Catherine Dolbear, Alan Ruttenberg, Uli Sattler posted to semantic sbwiki ontology infrastructure informatics by jmuhlich on 2009-09-03 23:59:32 as
	libAnnotationSBML: a library for exploiting SBML annotations. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 17. (1 September 2009), pp. 2292-2293. by Neil Swainston, Pedro Mendes posted to web semantic sbwiki sbml ontology model by jmuhlich on 2009-08-21 19:40:19 as along with 7 people and 1 group guhjy irenas neilswainston jonathancooper jvb Effie dullhunk NaCTeM
	Integration of constraints documented in SBML, SBO, and the SBML Manual facilitates validation of biological models [My Copy] Journal of Integrative Bioinformatics, Vol. 4, No. 3. (01 October 2007) by Allyson L. Lister, Matthew Pocock, Anil Wipat posted to xml web semantic sbwiki sbml ontology model by jmuhlich on 2009-08-19 21:42:55 as
	How Semantics Make Better Wikis [My Copy] (2006) by Eyal Oren, John G. Breslin, Stefan Decker posted to ontology sbwiki semantic wiki by jmuhlich on 2009-04-23 21:12:38 as
	A semantic wiki for collaborative knowledge formation [My Copy] In In Semantics (2005) by Sebastian Schaffert, Andreas Gruber, Rupert Westenthaler posted to informatics ontology sbwiki semantic workflow by jmuhlich on 2009-04-23 20:56:25 as
	Systems biology driven software design for the research enterprise. [My Copy] BMC bioinformatics, Vol. 9 (25 June 2008), 295. by John Boyle, Christopher Cavnor, Sarah Killcoyne, Ilya Shmulevich posted to database informatics infrastructure ontology warehouse workflow xml by jmuhlich on 2008-07-22 19:40:48 as along with 11 people pablocarb daforerog fgibson druvus jfr guhjy raistrick reyez GeeSharpMinor bootsy dullhunk
	Formal TCA cycle description based on elementary actions [My Copy] Journal of Biosciences, Vol. 32, No. 1. (29 January 2007), pp. 145-155. by Pierre Mazière, Nicolas Parisey, Marie Beurton-Aimar, Franck Molina posted to biology informatics ontology pathway standards sbwiki by jmuhlich on 2008-01-30 23:50:21 as
	LinkHub: a Semantic Web system that facilitates cross-database queries and information retrieval in proteomics. [My Copy] BMC bioinformatics, Vol. 8 Suppl 3 (2007) by A. K. Smith, K. H. Cheung, K. Y. Yip, M. Schultz, M. K. Gerstein posted to database informatics ontology semantic web sbwiki by jmuhlich on 2008-01-29 01:55:00 as along with 10 people and 1 group druvus nicklynch guhjy yas wnpx dullhunk hpiwowar pablomendes Simplicity dansullivanblk T_lab
	Are the current ontologies in biology good ontologies? [My Copy] Nature Biotechnology, Vol. 23, No. 9. (01 September 2005), pp. 1095-1098. by Larisa N. Soldatova, Ross D. King posted to ontology standards sbwiki by jmuhlich on 2008-01-29 00:09:47 as along with 17 people and 5 groups operon mikel_egana dagmar vkwn jerome irenas Yanno wcrosbie yas dullhunk onca anon_pl mhucka leechuck pablomendes peterli dansullivanblk Life Sciences Semantic Web (LSSW) dbk-lab Wikipedia CoP_CMS T_lab
	The HUPO PSI's molecular interaction format--a community standard for the representation of protein interaction data. [My Copy] Nature biotechnology, Vol. 22, No. 2. (February 2004), pp. 177-183. by Henning Hermjakob, Luisa Montecchi-Palazzi, Gary Bader, et al.Jérôme Wojcik, Lukasz Salwinski, Arnaud Ceol, Susan Moore, Sandra Orchard, Ugis Sarkans, Christian von Mering, Bernd Roechert, Sylvain Poux, Eva Jung, Henning Mersch, Paul Kersey, Michael Lappe, Yixue Li, Rong Zeng, Debashis Rana, Macha Nikolski, Holger Husi, Christine Brun, K. Shanker, Seth G. Grant, Chris Sander, Peer Bork, Weimin Zhu, Akhilesh Pandey, Alvis Brazma, Bernard Jacq, Marc Vidal, David Sherman, Pierre Legrain, Gianni Cesareni, Ioannis Xenarios, David Eisenberg, Boris Steipe, Chris Hogue, Rolf Apweiler posted to informatics ontology standards xml sbwiki by jmuhlich on 2008-01-25 18:33:24 as along with 7 people and 1 group aceol allysonlister irenas balajis grahamc lpfernandes lenov dbk-lab
	The Semantic Web Revisited [My Copy] Intelligent Systems, IEEE [see also IEEE Intelligent Systems and Their Applications], Vol. 21, No. 3. (2006), pp. 96-101. by N. Shadbolt, T. Berners-Lee, W. Hall posted to informatics ontology semantic standards web sbwiki by jmuhlich on 2007-10-10 18:51:30 as along with 16 people and 2 groups mavergames Yuancheng egh masaka asilva ianturton rgb kbdamm mzygmunt ivor DaveWebster splzdnkl allancho federicopaoloni Friederichs uhland Social computing pileWorks
	Ontologies for Modeling and Simulation: An Initial Framework [My Copy] by John A. Miller, Gregory T. Baramidze, Amit P. Sheth, Gregory A. Silver, Paul A. Fishwick posted to ontology semantic web by jmuhlich on 2007-07-10 23:31:17 as along with 2 people and 3 groups wnpx dagmar SorgerLab dIEMoSIRIS compneur
	Towards Principles for the Design of Ontologies Used for Knowledge Sharing [My Copy] In Formal Ontology in Conceptual Analysis and Knowledge Representation (1993) by T. R. Gruber edited by N. Guarino, R. Poli posted to ontology sbwiki by jmuhlich on 2007-07-10 23:25:06 as along with 15 people and 1 group mjbell jahrynx wnpx msn pchampin knud valery_kugler nroovers anansi PunkRock blaubaer_tfw antzil slayven zeppe mzygmunt SorgerLab
	Assessing semantic similarity measures for the characterization of human regulatory pathways [My Copy] Bioinformatics, Vol. 22, No. 8. (15 April 2006), pp. 967-973. by Xiang Guo, Rongxiang Liu, Craig D. Shriver, Hai Hu, Michael N. Liebman posted to clustering gene ontology similarity by jmuhlich on 2007-06-13 19:54:17 as along with 1 person and 1 group MarcoAlvarez SorgerLab

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sbwiki	24
ontology	19
informatics	18
semantic	12
standards	9
data	8
web	8
infrastructure	7
database	6
drug	5
model	5
sbml	5
cheminformatics	4
xml	4
biology	3
emot	3
gene	3
network	3
pathway	3
workflow	3
annotation	2
lipinski	2
protein	2
reduction	2
systems	2
target	2
visualization	2
warehouse	2
clique	1
clustering	1
cube	1
datacube	1
dle	1
dna	1
expression	1
genome	1
graph	1
hessian	1
imaging	1
interaction	1
knowledge_management	1
metabolite	1
mi	1
miriam	1
olap	1
open	1
philosophy	1
rules	1
sampling	1
science	1
semiotics	1
similarity	1
software	1
sorgerlab	1
source	1
statistics	1
transport	1
wiki	1

jmuhlich's ontology [19 articles] Export

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