jotwin's library 69 articles Export

	Optimal dynamical range of excitable networks at criticality [My Copy] Nature Physics, Vol. 2, No. 5. (23 April 2006), pp. 348-351. by Osame Kinouchi, Mauro Copelli posted to avalanches by jotwin on 2009-11-19 21:15:24 as along with 3 people fbaroni apeyrache jjray
	Stimulating neurons with light [My Copy] Current Opinion in Neurobiology, Vol. 12, No. 5. (1 October 2002), pp. 587-592. by E. Callaway posted to photostimulation by jotwin on 2009-11-19 21:12:20 as
	Self-organization and neuronal avalanches in networks of dissociated cortical neurons [My Copy] Neuroscience, Vol. 153, No. 4. (02 June 2008), pp. 1354-1369. by V. Pasquale, P. Massobrio, L. L. Bologna, M. Chiappalone, S. Martinoia posted to spontaneous_activity qp burst avalanches by jotwin on 2009-11-16 22:49:30 as along with 1 group VisionLab
	On the Dynamics of the Spontaneous Activity in Neuronal Networks [My Copy] PLoS ONE, Vol. 2, No. 5. (2007), e439. by Alberto Mazzoni, Frédéric D. Broccard, Elizabeth Garcia-Perez, Paolo Bonifazi, Maria E. Ruaro, Vincent Torre posted to spontaneous_activity qp burst avalanches by jotwin on 2009-11-16 22:44:55 as
	Spike Inference from Calcium Imaging Using Sequential Monte Carlo Methods [My Copy] Biophysical Journal, Vol. 97, No. 2. (22 July 2009), pp. 636-655. by Joshua T. Vogelstein, Brendon O. Watson, Adam M. Packer, Rafael Yuste, Bruno Jedynak, Liam Paninski posted to qp calcium_imaging by jotwin on 2009-11-12 22:21:14 as
	Fast and accurate detection of action potentials from somatic calcium fluctuations. [My Copy] Journal of neurophysiology, Vol. 100, No. 3. (2 September 2008), pp. 1668-1676. by Takuya Sasaki, Naoya Takahashi, Norio Matsuki, Yuji Ikegaya posted to qp calcium_imaging by jotwin on 2009-11-12 22:19:12 as
	A Compact Multiphoton 3D Imaging System for Recording Fast Neuronal Activity [My Copy] PLoS ONE, Vol. 2, No. 8. (2007), e699. by Dejan Vučinić, Terrence J. Sejnowski posted to qp calcium_imaging by jotwin on 2009-11-12 20:14:24 as
	Reconstruction of firing rate changes across neuronal populations by temporally deconvolved Ca2+ imaging [My Copy] Nature Methods, Vol. 3, No. 5. (20 April 2006), pp. 377-383. by Emre Yaksi, Rainer W. Friedrich posted to qp calcium_imaging by jotwin on 2009-11-11 23:43:41 as along with 4 people heja major724 chenlc03 starz1010101
	Fast Three-Dimensional Fluorescence Imaging of Activity in Neural Populations by Objective-Coupled Planar Illumination Microscopy [My Copy] Neuron, Vol. 57, No. 5. (13 March 2008), pp. 661-672. by Terrence F. Holekamp, Diwakar Turaga, Timothy E. Holy posted to qp calcium_imaging by jotwin on 2009-11-11 23:06:16 as
	Attractor dynamics of network UP states in the neocortex [My Copy] Nature, Vol. 423, No. 6937. (15 May 2003), pp. 283-288. by Rosa Cossart, Dmitriy Aronov, Rafael Yuste posted to qp calcium_imaging by jotwin on 2009-11-09 22:23:26 as along with 4 people flips apeyrache fbaroni starz1010101
	Imaging cellular network dynamics in three dimensions using fast 3D laser scanning. [My Copy] Nature methods, Vol. 4, No. 1. (03 January 2007), pp. 73-79. by Werner Göbel, Björn M. Kampa, Fritjof Helmchen posted to qp calcium_imaging by jotwin on 2009-11-09 22:22:10 as along with 1 person flieder
	Calcium imaging of cortical networks dynamics [My Copy] Cell Calcium, Vol. 37, No. 5. (May 2005), pp. 451-457. by R. Cossart, Y. Ikegaya, R. Yuste posted to qp calcium_imaging by jotwin on 2009-11-09 22:21:59 as along with 1 person starz1010101
	Watching neuronal circuit dynamics through functional multineuron calcium imaging (fMCI) [My Copy] Neuroscience Research, Vol. 58, No. 3. (July 2007), pp. 219-225. by N. Takahashi, T. Sasaki, A. Usami, N. Matsuki, Y. Ikegaya posted to qp calcium_imaging by jotwin on 2009-11-09 22:21:27 as along with 1 person napvasconcelos
	Neuronal avalanches imply maximum dynamic range in cortical networks at criticality [My Copy] (10 Jun 2009) by Woodrow L. Shew, Hongdian Yang, Thomas Petermann, Rajarshi Roy, Dietmar Plenz posted to qp avalanches by jotwin on 2009-10-30 15:39:55 as
	Dynamical synapses causing self-organized criticality in neural networks [My Copy] Nature Physics, Vol. 3, No. 12. (18 November 2007), pp. 857-860. by A. Levina, J. M. Herrmann, T. Geisel posted to qp avalanches by jotwin on 2009-10-30 15:38:52 as along with 2 people apeyrache PeterHiemeyer
	Self-Organized Criticality in the Olami-Feder-Christensen Model [My Copy] Physical Review Letters, Vol. 84, No. 17. (Apr 2000), pp. 4006-4009. by Josué X. de Carvalho, Carmen P. C. Prado posted to self-organized-criticality qp ofc by jotwin on 2009-10-26 20:37:36 as
	Critical Branching Captures Activity in Living Neural Networks and Maximizes the Number of Metastable States [My Copy] Physical Review Letters, Vol. 94, No. 5. (Feb 2005), 058101. by Clayton Haldeman, John M. Beggs posted to qp branching_process avalanches by jotwin on 2009-10-26 20:35:35 as
	Finite-size effects of avalanche dynamics [My Copy] Physical Review E, Vol. 66, No. 6. (Dec 2002), 066137. by Christian W. Eurich, J. Michael Herrmann, Udo A. Ernst posted to qp avalanches by jotwin on 2009-10-26 20:34:09 as
	Self-Organized Branching Processes: Mean-Field Theory for Avalanches [My Copy] Physical Review Letters, Vol. 75, No. 22. (27 Nov 1995), pp. 4071-4074. by Stefano Zapperi, Kent B. Lauritsen, H. Eugene Stanley posted to qp avalanches by jotwin on 2009-10-26 20:33:41 as along with 1 person rcrane
	Neuronal avalanches organize as nested theta- and beta/gamma-oscillations during development of cortical layer 2/3 [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 21. (27 May 2008), pp. 7576-7581. by Elakkat D. Gireesh, Dietmar Plenz posted to qp avalanches by jotwin on 2009-10-21 19:59:51 as
	Spontaneous cortical activity in awake monkeys composed of neuronal avalanches [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 37. (15 September 2009), pp. 15921-15926. by Thomas Petermann, Tara C. Thiagarajan, Mikhail A. Lebedev, Miguel A. L. Nicolelis, Dante R. Chialvo, Dietmar Plenz posted to qp avalanches by jotwin on 2009-10-21 19:59:13 as along with 2 people amorgan77 j-ito
	The organizing principles of neuronal avalanches: cell assemblies in the cortex? [My Copy] Trends in Neurosciences, Vol. 30, No. 3. (March 2007), pp. 101-110. by D. Plenz, T. Thiagarajan posted to qp cortical_networks avalanches by jotwin on 2009-09-30 20:06:52 as along with 5 people lshaw awooga ibschwartz fbaroni apeyrache
	Neuronal Avalanches Are Diverse and Precise Activity Patterns That Are Stable for Many Hours in Cortical Slice Cultures [My Copy] J. Neurosci., Vol. 24, No. 22. (2 June 2004), pp. 5216-5229. by John M. Beggs, Dietmar Plenz posted to qp cortical_networks avalanches by jotwin on 2009-09-30 19:43:38 as along with 4 people apeyrache napvasconcelos torfis fbaroni
	Neuronal avalanches in neocortical circuits. [My Copy] The Journal of neuroscience : the official journal of the Society for Neuroscience, Vol. 23, No. 35. (3 December 2003), pp. 11167-11177. by John M. Beggs, Dietmar Plenz posted to qp cortical_networks avalanches by jotwin on 2009-09-30 19:38:45 as along with 8 people jacopolamanna achiar apeyrache torfis balicea fbaroni ebalp jmchauvet
	Neuronal Oscillations in Cortical Networks [My Copy] Science, Vol. 304, No. 5679. (25 June 2004), pp. 1926-1929. by Gyorgy Buzsaki, Andreas Draguhn posted to oscillations cortical_networks by jotwin on 2009-09-30 19:35:38 as along with 17 people and 3 groups nelmor JCatanese tarokiritani mmwoodman beete davidho cudmore adrianmbartlett Kbenchenane klouie pgastrein cerkut awooga josepe apeyrache dcoates fbaroni york_lfp_group Glimcher_Lab contact-id
	Complex networks: Structure and dynamics [My Copy] Physics Reports, Vol. 424, No. 4-5. (February 2006), pp. 175-308. by S. Boccaletti, V. Latora, Y. Moreno, M. Chavez, D. Hwang posted to complex_networks by jotwin on 2009-09-30 19:33:52 as along with 39 people and 2 groups Sergey_gerbek Katieleonard tessonec heitzig-j dschafer yizhi hendysh vtraag janpaniev fierykylin acrmartins kshundyak kubyaddi ocs anphony panisson lfriedl jmenche tjpp ansobol jrw BarrosH afragop craigtalbert merazzle kevinweil gennaro muraken hariprasadt jaspervoskuilen flavian_vasile ltabourier salvoscellato watson nolodie khloudi ebalp Diego_Prada spool complex networks Complex_Real_Networks
	The Structure and Function of Complex Networks [My Copy] SIAM Review, Vol. 45, No. 2. (2003), pp. 167-256. by M. E. J. Newman posted to complex_networks by jotwin on 2009-09-30 19:33:40 as along with 37 people and 4 groups Sergey_gerbek halukbingol jsaramak tomhebbron LaurentHD vmarceau qqwert mrkn ocs brihea chibatching davidecellai diamantis panisson spool deanmalmgren pcarbo matteodellamico eyliu afragop merazzle muraken lshaw jaspervoskuilen timflutre gcalda gi0rgi0ne rcrane shikin nolodie stefanoallesina eustatic skumagai ilkert rrbarb ebalp Borelli complex networks Soslab Complex_Real_Networks EntrepreneurialRisks
	Power-law distributions in empirical data [My Copy] (2 Feb 2009) by Aaron Clauset, Cosma R. Shalizi, M. E. J. Newman posted to power_law_behaviour by jotwin on 2009-09-30 19:33:12 as along with 62 people and 2 groups danilov Diego_Prada kinop jaia lehalle jsaramak ccthomas vagoskar acrmartins krisl makrehchi quianominorleo akuhn arsyed coccoinomane janpaniev pawelsobko alexv Borelli tmarscha dpf garyfeng kubyaddi tnhh kaarsinogen dmeister ddahlem vtraag mattjb jfelipe yonyoni laurobeltrao mmcgloho galyardt gconaldi egh ansobol lfriedl jjray itmeson dumpa madhadron sdvillal bigbossman merazzle xpontus muraken sugarexpletive jaspervoskuilen tomhebbron gi0rgi0ne amoebe jasonn pprett AbnerCYH halukbingol anhlc stringertheory deanmalmgren jyew nazareno diamantis ReadingLab EntrepreneurialRisks
	Power laws, Pareto distributions and Zipf's law [My Copy] Contemporary Physics (29 September 2005), pp. 323-351. by M. E. J. Newman posted to qp power_law_behaviour by jotwin on 2009-09-30 19:30:27 as along with 61 people and 8 groups ddahlem jaspervoskuilen danilov Sergey_gerbek ingo Gorzomagnificent halukbingol makrehchi pdlug klouie tnhh diamantis flips jfelipe eisdur BelliOS nolodie pietrosperoni egh korakot sccook sriks6711 mafwood A_Olympia JeffreyPalmer derek_farn ansobol devzero nigini yaroslavvb lubrifix mague mapio ecolab garyfeng ChaTo yishuai Borelli bayesian lyongu scottmoody balicea mukundn proportional entropy scis0000001 bigbossman cristinaalp merazzle sugarexpletive mp4man MoritzStefaner mylit gi0rgi0ne ejazasi salvoscellato ruffini skheller ulmer quianominorleo dylanwalker Soslab Philosophy_of_Information Blog_and_Wiki_Research ReadingLab 18th-century_history_culture_and_society semantic-multicast-routing Web2 EntrepreneurialRisks
	Solving the distal reward problem through linkage of STDP and dopamine signaling. [My Copy] Cerebral cortex (New York, N.Y. : 1991), Vol. 17, No. 10. (13 October 2007), pp. 2443-2452. by Eugene M. Izhikevich posted to reinforcement-learning spikes by jotwin on 2009-05-08 14:57:41 as along with 9 people and 3 groups subhacom iPlant IQmatic klouie nelmor awooga dowlingj bmcwilliams rflorian Neuroscience Glimcher_Lab Coneural
	Polychronization: Computation with Spikes [My Copy] Neural Computation, Vol. 18, No. 2. (February 2006), pp. 245-282. by Eugene M. Izhikevich posted to spikes by jotwin on 2009-05-08 14:56:47 as along with 11 people and 5 groups Sergey_gerbek bayesian rsantana paulclinger tkf chchatham sinverso fbaroni robotact balicea sylvain_chevallier Neuroscience NeuronDynamics NeuralNetworks Cognitive_Development_Center_-_Neural_Nets_Chapter BrainReadingGroup
	Optimal spike-timing-dependent plasticity for precise action potential firing in supervised learning. [My Copy] Neural Comput, Vol. 18, No. 6. (June 2006), pp. 1318-1348. by J. P. Pfister, T. Toyoizumi, D. Barber, W. Gerstner posted to spikes stdp by jotwin on 2009-05-08 14:52:14 as along with 5 people tkf memming mura edauce sen_cheng
	Computational Aspects of Feedback in Neural Circuits [My Copy] PLoS Comput Biol, Vol. 3, No. 1. (19 January 2007), e165. by Wolfgang Maass, Prashant Joshi, Eduardo D. Sontag posted to feedback by jotwin on 2009-05-08 14:49:27 as along with 6 people sjjarvis PaperCollector fbaroni bayesian josepe napvasconcelos
	Natural gradient works efficiently in learning [My Copy] Neural Comput., Vol. 10, No. 2. (1998), pp. 251-276. by Shun I. Amari posted to natural-gradient by jotwin on 2009-04-16 16:26:58 as
	Can energy landscape roughness of proteins and RNA be measured by using mechanical unfolding experiments? [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 100, No. 18. (2003), pp. 10249-10253. by Changbong Hyeon, D. Thirumalai posted to protein-folding by jotwin on 2008-10-12 22:10:37 as along with 1 person hsekiguc
	De Novo Design of Foldable Proteins with Smooth Folding FunnelAutomated Negative Design and Experimental Verification [My Copy] Structure, Vol. 11, No. 5. (May 2003), pp. 581-590. by W. Jin, O. Kambara, H. Sasakawa, A. Tamura, S. Takada posted to protein-folding by jotwin on 2008-10-09 18:06:42 as
	Direct measurement of protein energy landscape roughness [My Copy] EMBO Reports, Vol. aop, No. current. (22 April 2005) by Reinat Nevo, Vlad Brumfeld, Ruti Kapon, Peter Hinterdorfer, Ziv Reich posted to protein-folding by jotwin on 2008-09-15 19:59:49 as along with 2 people martainn hsekiguc
	Energy landscapes and solved protein-folding problems. [My Copy] Philosophical transactions. Series A, Mathematical, physical, and engineering sciences, Vol. 363, No. 1827. (15 February 2005) by P. G. Wolynes posted to protein-folding review by jotwin on 2008-09-15 19:59:05 as
	From Levinthal to pathways to funnels [My Copy] Nature Structural & Molecular Biology, Vol. 4, No. 1. (01 January 1997), pp. 10-19. by Ken A. Dill, Hue S. Chan posted to protein-folding review by jotwin on 2008-09-15 19:51:33 as along with 4 people victorclaessen flbarroso doktornoe gisle
	On the Dynamical Complexity of Small-World Networks of Spiking Neurons [My Copy] (1 Aug 2008) by Murray Shanahan posted to small-world by jotwin on 2008-09-11 20:46:35 as along with 2 people beete dpf
	Dynamically Maintained Spike Timing Sequences in Networks of Pulse-Coupled Oscillators with Delays [My Copy] Physical Review Letters, Vol. 98, No. 4. (2007) by Pulin Gong, Cees van Leeuwen posted to spike-sequences by jotwin on 2008-09-11 18:46:36 as along with 2 people ibschwartz mik
	Phase transitions in an exactly soluble one-dimensional exclusion process [My Copy] Journal of Statistical Physics, Vol. 72, No. 1. (1 July 1993), pp. 277-296. by G. Schütz, E. Domany posted to tasep by jotwin on 2008-09-04 20:43:40 as
	An exact solution of a one-dimensional asymmetric exclusion model with open boundaries [My Copy] Journal of Statistical Physics, Vol. 69, No. 3. (1 November 1992), pp. 667-687. by B. Derrida, E. Domany, D. Mukamel posted to tasep by jotwin on 2008-09-04 20:43:25 as along with 2 people fkowald margaritis
	Exact solution of a 1D asymmetric exclusion model using a matrix formulation [My Copy] Journal of Physics A: Mathematical and General (1993), pp. 1493-1517. by B. Derrida, M. R. Evans, V. Hakim, V. Pasquier posted to tasep by jotwin on 2008-09-04 20:39:13 as
	Diffusion-driven mechanisms of protein translocation on nucleic acids. 1. Models and theory. [My Copy] Biochemistry, Vol. 20, No. 24. (24 November 1981), pp. 6929-6948. by O. G. Berg, R. B. Winter, P. H. von Hippel posted to tasep by jotwin on 2008-08-30 21:12:22 as
	Nonequilibrium dynamics in low-dimensional systems [My Copy] Physica A: Statistical Mechanics and its Applications, Vol. 313, No. 1-2. (1 October 2002), pp. 110-152. by M. R. Evans, R. A. Blythe posted to tasep by jotwin on 2008-08-29 18:16:02 as
	Kinetics of biopolymerization on nucleic acid templates. [My Copy] Biopolymers, Vol. 6, No. 1. (1968), pp. 1-5. by C. T. MacDonald, J. H. Gibbs, A. C. Pipkin posted to tasep by jotwin on 2008-08-28 21:46:57 as along with 1 person qwermish
	Hierarchical regular small-world networks [My Copy] Journal of Physics A: Mathematical and Theoretical, Vol. 41, No. 25. (June 2008), 252001. by S. Boettcher, B. Goncalves, H. Guclu posted to small-world by jotwin on 2008-08-28 21:17:16 as along with 1 person bgoncalves
	Scaling properties of the asymmetric exclusion process with long-range hopping [My Copy] Physical Review E (Statistical, Nonlinear, and Soft Matter Physics), Vol. 77, No. 5. (2008) by Szavits J. Nossan, K. Uzelac posted to tasep by jotwin on 2008-08-27 18:42:08 as
	Stochastic non-equilibrium systems [My Copy] Advances in Physics, Vol. 50 (July 2001), pp. 431-496. by R. Stinchcombe posted to tasep by jotwin on 2008-08-27 18:32:00 as

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qp	23
avalanches	13
calcium_imaging	9
tasep	8
protein-folding	5
cortical_networks	4
review	4
self-organized-criticality	4
small-world	4
cellular-automata	3
networks	3
spikes	3
spike-sequences	3
artificial-life	2
burst	2
complex_networks	2
percolation	2
power_law_behaviour	2
spontaneous_activity	2
boolean-networks	1
branching_process	1
connectome	1
dna	1
evolution	1
feedback	1
game-of-life	1
genetic-algorithms	1
natural-gradient	1
ofc	1
oscillations	1
photostimulation	1
reinforcement-learning	1
stdp	1
zipf	1

jotwin's library 69 articles Export

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