joule's library 79 articles Export

	BIOCHEMISTRY: A Postgenomic Visual Icon [My Copy] Science, Vol. 319, No. 5871. (28 March 2008), pp. 1772-1773. by John N. Weinstein posted to bioinformatics heatmap review visualization by joule on 2009-06-04 17:04:26 as along with 1 person guhjy
	Hawkeye: an interactive visual analytics tool for genome assemblies [My Copy] Genome Biology, Vol. 8, No. 3. (09 March 2007), R34. by Michael Schatz, Adam Phillippy, Ben Shneiderman, Steven Salzberg posted to bioinformatics genome visualanalytics visualization by joule on 2009-05-19 19:10:05 as along with 11 people and 2 groups darian n00c Thaverkamp hpaces orzenil GustavoLacerda natstreet druvus stajich azazello Neeperando Mycology gatech-compgenomics
	Challenges in Visual Data Analysis [My Copy] In Proceedings of the conference on Information Visualization (2006), pp. 9-16. by Daniel A. Keim, Florian Mansmann, Jorn Schneidewind, Hartmut Ziegler posted to visualanalytics visualization by joule on 2009-05-19 15:57:24 as along with 1 person hereld
	A semiempirical free energy force field with charge-based desolvation [My Copy] Journal of Computational Chemistry, Vol. 28, No. 6. (1 February 2007), pp. 1145-1152. by Ruth Huey, Garrett M. Morris, Arthur J. Olson, David S. Goodsell posted to autodock bioinformatics docking viscloudock by joule on 2009-04-21 10:24:34 as along with 6 people and 1 group trishul nickolay oteri IrinaMoreira BragilMassoud carlescorbi Structural Biology Group TorVergata
	Automated docking using a Lamarckian genetic algorithm and an empirical binding free energy function [My Copy] Journal of Computational Chemistry, Vol. 19, No. 14. (6 January 1998), pp. 1639-1662. by Garrett M. Morris, David S. Goodsell, Robert S. Halliday, et al.Ruth Huey, William E. Hart, Richard K. Belew, Arthur J. Olson posted to autodock bioinformatics docking viscloudock by joule on 2009-04-21 10:23:51 as along with 23 people and 2 groups trishul nickolay npt11tpn jamalex lna Lombardo_7 karinaecomp oteri A_Coletta_Thesis arlam dgruiz nachtalp P2324548 yongzhao peprovy tovrstra papatonyhill schlauchi carlescorbi middledomain LamBras andreramme UVA_mag_res Chang group TSRI_MGL
	Automated docking of substrates to proteins by simulated annealing. [My Copy] Proteins, Vol. 8, No. 3. (1990), pp. 195-202. by D. S. Goodsell, A. J. Olson posted to autodock bioinformatics docking simulation viscloudock by joule on 2009-04-21 10:23:11 as along with 4 people BragilMassoud apostola robert schlauchi
	NOMAD-Ref: visualization, deformation and refinement of macromolecular structures based on all-atom normal mode analysis [My Copy] Nucl. Acids Res., Vol. 34, No. suppl_2. (1 July 2006), pp. W52-56. by Erik Lindahl, Cyril Azuara, Patrice Koehl, Marc Delarue posted to bioinformatics docking protein viscloudock by joule on 2009-04-16 12:19:52 as
	User needs analysis to design a 3D multimodal protein-docking interface [My Copy] 3D User Interfaces, 2008. 3DUI 2008. IEEE Symposium on In 3D User Interfaces, 2008. 3DUI 2008. IEEE Symposium on (2008), pp. 125-132. by N. Ferey, G. Bouyer, C. Martin, P. Bourdot, J. Nelson, J. M. Burkhardt posted to 3d bioinformatics docking graphics interactive viscloudock visualization by joule on 2009-04-15 10:38:47 as
	A Screen Space Quality Method for Data Abstraction [My Copy] Computer Graphics Forum, Vol. 27, No. 3. (2008), pp. 1039-1046. by J. Johansson, M. Cooper posted to parallelcoordinates visualization by joule on 2009-03-18 18:27:31 as
	Pointcloudxplore: Visual analysis of 3d gene expression data using physical views and parallel coordinates [My Copy] In Eurographics/IEEE-VGTC Symposium on Visualization Proceedings (2006), pp. 203-210. by O. Rübel, G. H. Weber, S. V. E. Keränen, et al.C. C. Fowlkes, Luengo C. L. Hendriks, L. Simirenko, N. Y. Shah, M. B. Eisen, M. D. Biggin, H. Hagen, D. Sudar, J. Malik, D. W. Knowles, B. Hamann posted to bioinformatics cpc drosophila geneexpression parallelcoordinates visualization by joule on 2009-03-18 18:04:34 as
	Multidimensional transfer functions for interactive volume rendering [My Copy] Visualization and Computer Graphics, IEEE Transactions on, Vol. 8, No. 3. (07 November 2002), pp. 270-285. by J. Kniss, G. Kindlmann, C. Hansen posted to multidimensional tvcg visualization volumerendering by joule on 2009-03-18 17:51:54 as along with 3 people zce sprite singhsh
	PostDock: A novel visualization tool for the analysis of molecular docking [My Copy] Computing and Visualization in Science, Vol. 12, No. 1. (1 January 2009), pp. 1-7. by E. Wiley, Ghislain Deslongchamps posted to application docking protein viscloudock visualization by joule on 2009-03-16 10:29:43 as
	An insight-based methodology for evaluating bioinformatics visualizations [My Copy] Visualization and Computer Graphics, IEEE Transactions on, Vol. 11, No. 4. (2005), pp. 443-456. by P. Saraiya, C. North, K. Duca posted to bioinformatics evaluation genome visualanalytics visualization by joule on 2009-02-27 09:29:19 as along with 3 people and 4 groups raulsierra malenitah2 yijisoo CHISEL infovis DSS mobilecomputing
	Frequency plot and relevance plot to enhance visual data exploration [My Copy] Computer Graphics and Image Processing, 2003. SIBGRAPI 2003. XVI Brazilian Symposium on In Computer Graphics and Image Processing, 2003. SIBGRAPI 2003. XVI Brazilian Symposium on (2003), pp. 117-124. by J. F. Rodrigues, A. J. M. Traina, C. Traina posted to cpc density frequency parallelcoordinates visualization by joule on 2009-02-27 09:22:25 as along with 1 person ianturton
	Parallel Sets: Visual Analysis of Categorical Data [My Copy] In INFOVIS '05: Proceedings of the Proceedings of the 2005 IEEE Symposium on Information Visualization (2005) by Fabian Bendix, Robert Kosara, Helwig Hauser posted to categorical infovis parallelcoordinates visualization by joule on 2009-02-27 09:19:42 as
	Outlier-Preserving Focus+Context Visualization in Parallel Coordinates [My Copy] Visualization and Computer Graphics, IEEE Transactions on In Visualization and Computer Graphics, IEEE Transactions on, Vol. 12, No. 5. (2006), pp. 893-900. by M. Novotny, H. Hauser posted to cpc infovis interactive outlier parallelcoordinates visualization by joule on 2009-02-27 09:15:39 as along with 1 person adasgupt14
	Design and Evaluation of Tiled Parallel Coordinate Visualization of Multichannel EEG Data [My Copy] IEEE Transactions on Visualization and Computer Graphics, Vol. 13, No. 1. (2007), pp. 70-79. by Michael T. Caat, Natasha M. Maurits posted to bioinformatics cpc eeg evaluation parallelcoordinates visualization by joule on 2009-02-27 09:14:23 as along with 1 person recheliu
	Exploring Highly Structured Data: A Comparative Study of Stardinates and Parallel Coordinates [My Copy] In IV '05: Proceedings of the Ninth International Conference on Information Visualisation (2005), pp. 312-320. by Monika Lanzenberger, Silvia Miksch, Margit Pohl posted to cpc evaluation infovis parallelcoordinates starcoordinates stardinates starglyphs visualization by joule on 2009-02-27 09:13:11 as
	Hierarchical Edge Bundles: Visualization of Adjacency Relations in Hierarchical Data [My Copy] IEEE Transactions on Visualization and Computer Graphics, Vol. 12, No. 5. (September 2006), pp. 741-748. by Danny Holten posted to cpc infovis parallelcoordinates visualization by joule on 2009-02-27 09:10:47 as along with 1 person raulsierra
	Interactive feature specification for focus+context visualization of complex simulation data [My Copy] In VISSYM '03: Proceedings of the symposium on Data visualisation 2003 (2003), pp. 239-248. by Helmut Doleisch, Martin Gasser, Helwig Hauser posted to diesel simulation simvis va visualanalytics visualization by joule on 2009-02-23 08:47:32 as
	The next frontier for bio- and cheminformatics visualization [My Copy] Computer Graphics and Applications, IEEE In Computer Graphics and Applications, IEEE, Vol. 22, No. 5. (2002), pp. 6-11. by J. P. Lee, D. Carr, G. Grinstein, J. Kinney, J. Saffer posted to bioinformatics cg ieee visualanalytics visualization by joule on 2009-02-16 18:17:42 as
	Imaging vector fields using line integral convolution [My Copy] In SIGGRAPH '93: Proceedings of the 20th annual conference on Computer graphics and interactive techniques (1993), pp. 263-270. by Brian Cabral, Leith C. Leedom posted to cg graphics lic by joule on 2009-02-12 15:48:01 as along with 1 person aarchiba
	ChromoWheel: a new spin on eukaryotic chromosome visualization [My Copy] Bioinformatics, Vol. 20, No. 4. (1 March 2004), pp. 576-577. by Sven Ekdahl, Erik L. Sonnhammer posted to bioinformatics genome visualization by joule on 2008-12-11 15:29:54 as
	Interactive information visualization of a million items [My Copy] Information Visualization, 2002. INFOVIS 2002. IEEE Symposium on In Information Visualization, 2002. INFOVIS 2002. IEEE Symposium on (2002), pp. 117-124. by J. D. Fekete, C. Plaisant posted to infovis overview visualanalytics visualization by joule on 2008-09-16 08:49:55 as along with 1 person ewerton
	Top 10 Unsolved Information Visualization Problems [My Copy] IEEE Comput. Graph. Appl., Vol. 25, No. 4. (July 2005), pp. 12-16. by Chaomei Chen posted to infovis scivis visualanalytics visualization by joule on 2008-09-16 08:40:49 as along with 9 people and 1 group silberbauer Saerdna fgibson nuin codex zqshen fryanpan leonardo ajay81 GraphVis
	The Eyes Have It: A Task by Data Type Taxonomy for Information Visualizations [My Copy] Visual Languages, IEEE Symposium on, Vol. 0 (1996), pp. 336-343. by Ben Shneiderman posted to cg graphics infovis overview visualization by joule on 2008-09-16 08:33:00 as along with 10 people and 2 groups Saerdna KAllendoerfer indratmo Hoenikker heikohaller thatbrock erisu codex flgeyer fryanpan Adaptive-Web CLEF
	Extreme visualization: squeezing a billion records into a million pixels [My Copy] In SIGMOD '08: Proceedings of the 2008 ACM SIGMOD international conference on Management of data (2008), pp. 3-12. by Ben Shneiderman posted to infovis overview visualanalytics visualization by joule on 2008-09-16 08:30:55 as along with 2 people sschurer ajay81
	CUDA compatible GPU cards as efficient hardware accelerators for Smith-Waterman sequence alignment [My Copy] BMC Bioinformatics, Vol. 9, No. Suppl 2. (2008), S10. by Svetlin Manavski, Giorgio Valle posted to alignment bioinformatics cuda dp dynamicprogramming gpgpu htc smith-waterman by joule on 2008-09-16 08:16:53 as along with 9 people ihaque jmanning2k druvus sterovetta operon alexgeorgiou antonkratz pansapiens bschaeli
	Dynamic querying for pattern identification in microarray and genomic data [My Copy] Multimedia and Expo, 2003. ICME '03. Proceedings. 2003 International Conference on In Multimedia and Expo, 2003. ICME '03. Proceedings. 2003 International Conference on, Vol. 3 (2003), pp. III-453-6 vol.3. by H. Hochheiser, E. H. Baehrecke, S. M. Mount, B. Shneiderman posted to bioinformatics microarray visualanalytics visualization by joule on 2008-09-15 11:56:07 as
	Interactive color mosaic and dendrogram displays for signal/noise optimization in microarray data analysis [My Copy] Multimedia and Expo, 2003. ICME '03. Proceedings. 2003 International Conference on In Multimedia and Expo, 2003. ICME '03. Proceedings. 2003 International Conference on, Vol. 3 (2003), pp. III-461-4 vol.3. by Jinwook Seo, M. Bakay, Po Zhao, et al.Yi-Wen Chen, P. Clarkson, B. Shneiderman, E. P. Hoffman posted to bioinformatics infovis interactive microarray visualanalytics visualization by joule on 2008-09-15 11:52:03 as
	Perceiving patterns in parallel coordinates: determining thresholds for identification of relationships [My Copy] Information Visualization, Vol. 7, No. 2. (2008), pp. 152-162. by Johansson, Jimmy, Forsell, et al. Camilla, Lind, Mats, Cooper, Matthew posted to parallelcoordinates patternrecognition patterns perception visualanalytics visualization by joule on 2008-09-10 09:35:30 as
	Graphical Perception: Theory, Experimentation, and Application to the Development of Graphical Methods [My Copy] Journal of the American Statistical Association, Vol. 79, No. 387. (1984), pp. 531-554. by William S. Cleveland, Robert Mcgill posted to metaphors perception primitives visualization by joule on 2008-09-10 09:24:48 as
	Bioinformatics Visualization: Introduction to the Special Issue [My Copy] Information Visualization, Vol. 4, No. 3. (2005), pp. 147-148. by Chris North, Theresa-Marie Rhyne, Karen Duca posted to bioinformatics visualization by joule on 2008-09-10 09:19:31 as along with 3 people and 1 group neilernst malenitah2 eweaver CHISEL
	Model-based clustering on the unit sphere with an illustration using gene expression profiles. [My Copy] Biostatistics, Vol. 9, No. 1. (January 2008), pp. 66-80. by J. L. Dortet-Bernadet, N. Wicker posted to bioinformatics biostatistics clustering clusters microarray statistics by joule on 2008-08-26 11:58:06 as along with 1 person jfr
	Representational Oligonucleotide Microarray Analysis: A High-Resolution Method to Detect Genome Copy Number Variation [My Copy] Genome Research, Vol. 13, No. 10. (October 2003), pp. 2291-2305. by Robert Lucito, John Healy, Joan Alexander, et al.Andrew Reiner, Diane Esposito, Maoyen Chi, Linda Rodgers, Amy Brady, Jonathan Sebat, Jennifer Troge, Joseph A. West, Seth Rostan, Ken C. Q. Nguyen, Scott Powers, Kenneth Q. Ye, Adam Olshen, Ennapadam Venkatraman, Larry Norton, Michael Wigler posted to bioinformatics cnv genome microarray by joule on 2008-08-01 09:11:00 as along with 5 people Annab stharward oilcan rdiaz bioguru2000
	Assembly of protein tertiary structures from fragments with similar local sequences using simulated annealing and bayesian scoring functions [My Copy] Journal of Molecular Biology, Vol. 268, No. 1. (25 April 1997), pp. 209-225. by K. Simons posted to ab_initio protein rosetta by joule on 2008-07-22 16:18:52 as along with 12 people and 2 groups chemrahul82 paddydu Diego_Prada reyez guxiyou ana jwm vavi wouterboomsma j3xucite hmk mijam structural_bioinformatics Bioinformatics
	A Model for Measurement Error for Gene Expression Arrays [My Copy] J Comput Biol, Vol. 8, No. 6. (2001), pp. 557-569. by D. Rocke, B. Durbin posted to microarray statistics by joule on 2008-07-20 11:03:31 as along with 1 person baldigroup
	Enabling Automatic Clutter Reduction in Parallel Coordinate Plots [My Copy] Visualization and Computer Graphics, IEEE Transactions on In Visualization and Computer Graphics, IEEE Transactions on, Vol. 12, No. 5. (2006), pp. 717-724. by G. Ellis, A. Dix posted to occlusion opacity parallelcoordinates rasterization by joule on 2008-07-08 10:43:11 as along with 1 person adasgupt14
	3-dimensional display for clustered multi-relational parallel coordinates [My Copy] Information Visualisation, 2005. Proceedings. Ninth International Conference on In Information Visualisation, 2005. Proceedings. Ninth International Conference on (2005), pp. 188-193. by J. Johansson, M. Cooper, M. Jern posted to 3d clusters parallelcoordinates visualization by joule on 2008-07-08 09:27:36 as
	A Parallel Coordinates Style Interface for Exploratory Volume Visualization [My Copy] IEEE Transactions on Visualization and Computer Graphics, Vol. 11, No. 1. (2005), pp. 71-80. by Melanie Tory, Simeon Potts, Torsten Moller posted to parallelcoordinates volumerendering by joule on 2008-02-27 00:34:20 as
	The table lens: merging graphical and symbolic representations in an interactive focus + context visualization for tabular information [My Copy] In Proc. of SIGCHI conference on Human factors in computing systems (1994), pp. 318-322. by R. Rao, S. K. Card posted to tablelens by joule on 2008-02-27 00:33:50 as
	Revealing Structure within Clustered Parallel Coordinates Displays [My Copy] In Proc. of IEEE Symposium on Information Visualization (2005) by J. Johansson, P. Ljung, M. Jern, M. Cooper posted to clusters diplomarbeit opacity parallelcoordinates spray textures by joule on 2008-02-27 00:33:03 as
	An Interactive 3D Integration of Parallel Coordinates and Star Glyphs [My Copy] In Proc. of IEEE Symposium on Information Visualization (2005) by E. Fanea, S. Carpendale, T. Isenberg posted to diplomarbeit parallelcoordinates spray starglyphs visualization by joule on 2008-02-27 00:31:36 as
	Uncovering Clusters in Crowded Parallel Coordinates Visualizations [My Copy] Proc. of IEEE Symposium on Information Visualization, Vol. 00 (2004), pp. 81-88. by A. O. Artero, M. C. F. de Oliveira, H. Levkowitz posted to density frequency opacity parallelcoordinates by joule on 2008-02-27 00:29:02 as
	GGobi: evolving from XGobi into an extensible framework for interactive data visualization [My Copy] Computational Statistics and Data Analysis, Vol. 43, No. 4. (2003), pp. 423-444. by D. F. Swayne, D. T. Lang, A. Buja, D. Cook posted to ggobi by joule on 2008-02-27 00:26:04 as
	Parallel coordinates: a tool for visualizing multi-dimensional geometry [My Copy] In Proc. of IEEE Visualization (1990), pp. 361-378. by A. Inselberg, B. Dimsdale posted to parallelcoordinates by joule on 2008-02-27 00:19:07 as
	The Plane with Parallel Coordinates [My Copy] The Visual Computer, Vol. 1, No. 4. (1985), pp. 69-91. by A. Inselberg posted to parallelcoordinates by joule on 2008-02-27 00:19:07 as
	Hierarchical Parallel Coordinates for Exploration of Large Datasets [My Copy] Proc. of IEEE on Visualization (1999), pp. 43-50. by Y. H. Fua, M. O. Ward, E. A. Rundensteiner posted to parallelcoordinates xmdvtool by joule on 2008-02-27 00:17:32 as
	Exploring Gene Expression Data, Using Plots [My Copy] Journal of Data Science, Vol. 5 (2007) by D. Cook, H. Hofmann, E. K. Lee, H. Yang, B. Nikolau, E. Wurtele posted to microarray visualization by joule on 2008-02-27 00:16:48 as
	3D parallel coordinate systems - A new data visualization method in the context of microscopy-based multicolor tissue cytometry [My Copy] Cytometry Part A, Vol. 69A, No. 7. (2006), pp. 601-611. by M. Streit, R. C. Ecker, K. Österreicher, et al.G. E. Steiner, H. Bischof, C. Bangert, T. Kopp, R. Rogojanu posted to cytometry density parallelcoordinates by joule on 2008-02-27 00:16:04 as along with 1 person VGreiff

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visualization	32
parallelcoordinates	24
bioinformatics	18
visualanalytics	11
infovis	9
microarray	8
diplomarbeit	7
spray	7
cpc	6
docking	6
viscloudock	6
datasets	4
genome	4
graphics	4
autodock	3
bibtex-import	3
cg	3
clusters	3
density	3
evaluation	3
interactive	3
opacity	3
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protein	3
3d	2
cellcycle	2
digital	2
frequency	2
imaging	2
patterns	2
perception	2
r	2
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smalltalk	2
starglyphs	2
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volumerendering	2
xmdvtool	2
yeast	2
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dp	1
drosophila	1
dynamicprogramming	1
eda	1
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fisheye	1
geneexpression	1
ggobi	1
gpgpu	1
heatmap	1
histogram	1
htc	1
ieee	1
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lic	1
metaphors	1
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mvc	1
occlusion	1
oop	1
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patternrecognition	1
primitives	1
rasterization	1
review	1
rosetta	1
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scivis	1
simvis	1
smith-waterman	1
starcoordinates	1
stardinates	1
tablelens	1
textures	1
tvcg	1
va	1

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