jsatkosk's snp [40 articles] Export

Recent papers added to jsatkosk's library classified by the tag snp. You can also see everyone's snp.

	R/Bioconductor software for Illumina's Infinium whole-genome genotyping BeadChips. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 19. (1 October 2009), pp. 2621-2623. by Matthew E. Ritchie, Benilton S. Carvalho, Kurt N. Hetrick, Simon Tavaré, Rafael A. Irizarry posted to snp genotyping bioinformatics by jsatkosk on 2009-10-05 20:55:28 as along with 7 people carolep daforerog djkt shikin dswan rdiaz torfinnnome
	PineSAP--sequence alignment and SNP identification pipeline [My Copy] Bioinformatics, Vol. 25, No. 19. (1 October 2009), pp. 2609-2610. by Jill L. Wegrzyn, Jennifer M. Lee, John Liechty, David B. Neale posted to snp identification bioinformatics by jsatkosk on 2009-10-05 20:53:58 as along with 7 people jasontsai daforerog djkt operon nuin n00c druvus
	Handling linkage disequilibrium in qualitative trait linkage analysis using dense SNPs: a two-step strategy [My Copy] BMC Genetics, Vol. 10, No. 1. (10 August 2009), 44. by Kelly Cho, Josee Dupuis posted to snp qtl linkage by jsatkosk on 2009-08-17 20:06:19 as
	Detecting Ancient Admixture and Estimating Demographic Parameters in Multiple Human Populations [My Copy] Mol Biol Evol, Vol. 26, No. 8. (1 August 2009), pp. 1823-1827. by Jeffrey D. Wall, Kirk E. Lohmueller, Vincent Plagnol posted to admixture diversity human snp by jsatkosk on 2009-07-29 19:50:27 as along with 1 person djkt
	Global discovery of primate-specific genes in the human genome [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 29. (21 July 2009), pp. 12019-12024. by Sen-Kwan Tay, Jason Blythe, Leonard Lipovich posted to human primate snp by jsatkosk on 2009-07-29 19:47:01 as along with 2 people clearbluespring bpcusack
	Quality scores and SNP detection in sequencing-by-synthesis systems. [My Copy] Genome research, Vol. 18, No. 5. (22 May 2008), pp. 763-770. by William Brockman, Pablo Alvarez, Sarah Young, et al.Manuel Garber, Georgia Giannoukos, William L. Lee, Carsten Russ, Eric S. Lander, Chad Nusbaum, David B. Jaffe posted to discovery snp by jsatkosk on 2009-06-11 22:57:06 as along with 12 people n00c jonilaserson maren natstreet druvus cap1 caseybrown dbensasson bpb Neeperando sharpton GustavoLacerda
	SNP discovery and allele frequency estimation by deep sequencing of reduced representation libraries. [My Copy] Nat Methods (24 February 2008) by Curtis P P. Van Tassell, Timothy P L P. Smith, Lakshmi K K. Matukumalli, et al.Jeremy F F. Taylor, Robert D D. Schnabel, Cynthia Taylor T. Lawley, Christian D D. Haudenschild, Stephen S S. Moore, Wesley C C. Warren, Tad S S. Sonstegard posted to discovery library reduced representation snp by jsatkosk on 2009-06-11 22:52:32 as along with 4 people jasontsai orzenil lpanunzi guhjy
	Searching for Genotype-Phenotype Structure: Using Hierarchical Log-Linear Models in Crohn Disease [My Copy] The American Journal of Human Genetics (29 January 2009) by J. Chapman, C. Onnie, N. Prescott, et al.S. Fisher, J. Mansfield, C. Mathew, C. Lewis, C. Verzilli, J. Whittaker posted to algorithm association disease genotype phenotype snp by jsatkosk on 2009-06-11 22:49:50 as along with 2 people pkonings psique
	An optimal DNA pooling strategy for progressive fine mapping. [My Copy] Genetica (28 May 2008) by Xiao-Fei F. Chi, Xiang-Yang Y. Lou, Mark C. Yang, Qing-Yao Y. Shu posted to dna genotype mapping population snp by jsatkosk on 2009-06-11 22:47:20 as along with 1 person guhjy
	Power of deep, all-exon resequencing for discovery of human trait genes. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 106, No. 10. (10 March 2009), pp. 3871-3876. by Gregory V. Kryukov, Alexander Shpunt, John A. Stamatoyannopoulos, Shamil R. Sunyaev posted to association polymorphism sequencing snp study by jsatkosk on 2009-06-11 22:44:31 as along with 5 people jfr daforerog guhjy lp2 bpcusack
	Sample-size properties of a case-control association analysis of multistage SNP studies for identifying disease susceptibility genes. [My Copy] J Hum Genet (21 February 2008) by Nobutaka Kitamura, Kouhei Akazawa, Shin-Ichi I. Toyabe, Akinori Miyashita, Ryozo Kuwano, Junichiro Nakamura posted to association disease snp by jsatkosk on 2009-06-11 22:27:35 as along with 1 person guhjy
	Estimating coverage and power for genetic association studies using near-complete variation data [My Copy] Nat Genet, Vol. 40, No. 7. (July 2008), pp. 841-843. by Tushar R. Bhangale, Mark J. Rieder, Deborah A. Nickerson posted to hapmap linkage snp by jsatkosk on 2009-06-11 22:26:00 as along with 4 people pkonings guhjy caseybrown djkt
	A procedure for highly specific, sensitive, and unbiased whole-genome amplification [My Copy] Proceedings of the National Academy of Sciences, Vol. 105, No. 40. (7 October 2008), pp. 15499-15504. by Xinghua Pan, Alexander E. Urban, Dean Palejev, et al.Vincent Schulz, Fabian Grubert, Yiping Hu, Michael Snyder, Sherman M. Weissman posted to amplification cnv genome snp whole by jsatkosk on 2009-06-11 22:12:37 as along with 3 people pkonings lusk Katje
	On Estimating the Heterozygosity and Polymorphism Information Content Value [My Copy] Theoretical Population Biology, Vol. 57, No. 3. (May 2000), pp. 265-271. by S. Shete posted to algorithm heterozygosity snp by jsatkosk on 2009-06-11 22:10:42 as
	Two-stage designs to identify the effects of SNP combinations on complex diseases [My Copy] J Hum Genet, Vol. 53, No. 8. (27 June 2008), pp. 739-746. by Guolian Kang, Weihua Yue, Jifeng Zhang, et al.Marianne Huebner, Handi Zhang, Yan Ruan, Tianlan Lu, Yansu Ling, Yijun Zuo, Dai Zhang posted to association disease snp by jsatkosk on 2009-06-11 18:57:23 as
	Quality and completeness of SNP databases [My Copy] Nature Genetics, Vol. 33, No. 4. (24 March 2003), pp. 457-458. by David E. Reich, Stacey B. Gabriel, David Altshuler posted to database snp by jsatkosk on 2009-06-11 18:30:36 as along with 2 people n00c farhat
	A HapMap harvest of insights into the genetics of common disease. [My Copy] The Journal of clinical investigation, Vol. 118, No. 5. (1 May 2008), pp. 1590-1605. by Teri A. Manolio, Lisa D. Brooks, Francis S. Collins posted to disease genetic hapmap snp by jsatkosk on 2009-06-11 18:24:14 as along with 5 people psique daforerog galka8_diploma xingxu guhjy
	Inferring population mutation rate and sequencing error rate using the SNP frequency spectrum in a sample of DNA sequences. [My Copy] Molecular biology and evolution (24 March 2009) by Xiaoming Liu, Taylor J J. Maxwell, Eric Boerwinkle, Yun-Xin X. Fu posted to error mutation rate sequencing snp by jsatkosk on 2009-06-11 02:54:04 as along with 4 people djkt sameersoi jmeppley bpcusack
	Potential etiologic and functional implications of genome-wide association loci for human diseases and traits [My Copy] Proceedings of the National Academy of Sciences, Vol. 106, No. 23. (9 June 2009), pp. 9362-9367. by Lucia A. Hindorff, Praveen Sethupathy, Heather A. Junkins, et al.Erin M. Ramos, Jayashri P. Mehta, Francis S. Collins, Teri A. Manolio posted to association disease genome phenotype snp whole by jsatkosk on 2009-06-11 02:52:11 as along with 6 people liqbbi rdiaz guhjy zufar daforerog pkonings
	Genetic variation at the TNF-α promoter and malaria susceptibility in rhesus (Macaca mulatta) and long-tailed (Macaca fascicularis) macaques☆ [My Copy] Infection, Genetics and Evolution (06 April 2009) by Shannon Flynn, Jessica Satkoski, Nicholas Lerche, Sreetharan Kanthaswamy, David G. Smith posted to disease fascicularis macaque malaria mulatta snp by jsatkosk on 2009-06-10 21:34:22 as
	Lack of association between genetic variation in G-protein-coupled receptor for asthma susceptibility and childhood asthma and atopy [My Copy] Genes and Immunity, Vol. aop, No. current. by H. Wu, I. Romieu, J. J. Sienra-Monge, et al.Del B. E. Rio-Navarro, L. Burdett, J. Yuenger, H. Li, S. J. Chanock, S. J. London posted to asthma disease genetics snp by jsatkosk on 2009-06-09 21:19:01 as
	The Bioperl Toolkit: Perl Modules for the Life Sciences [My Copy] Genome Res., Vol. 12, No. 10. (1 October 2002), pp. 1611-1618. by Jason E. Stajich, David Block, Kris Boulez, et al.Steven E. Brenner, Stephen A. Chervitz, Chris Dagdigian, Georg Fuellen, James G. Gilbert, Ian Korf, Hilmar Lapp, Heikki Lehvaslaiho, Chad Matsalla, Chris J. Mungall, Brian I. Osborne, Matthew R. Pocock, Peter Schattner, Martin Senger, Lincoln D. Stein, Elia Stupka, Mark D. Wilkinson, Ewan Birney posted to bioperl microarray snp by jsatkosk on 2009-06-09 20:59:21 as along with 26 people and 2 groups ludaesch kiekyon Thaverkamp Cortel brdwilde daforerog GustavoLacerda krapnik jmeppley chad_davis rvosa indigoviolet skhadar dullhunk dgront stajich noby incovoma glycine tyrosine threonine valine nklee hpaces sekmi ninch EisenLab FAB-lab
	The success of the genome-wide association approach: a brief story of a long struggle [My Copy] European Journal of Human Genetics, Vol. aop, No. current. by Ku C. Seng, Chia K. Seng posted to association cnv disease genome haplotype hapmap linkage snp wide by jsatkosk on 2009-06-09 18:52:38 as along with 2 people xingxu guhjy
	Genome-wide association analysis identifies 20 loci that influence adult height. [My Copy] Nature genetics, Vol. 40, No. 5. (May 2008), pp. 575-583. by Michael N. Weedon, Hana Lango, Cecilia M. Lindgren, et al.Chris Wallace, David M. Evans, Massimo Mangino, Rachel M. Freathy, John R. Perry, Suzanne Stevens, Alistair S. Hall, Nilesh J. Samani, Beverly Shields, Inga Prokopenko, Martin Farrall, Anna Dominiczak, Diabetes Genetics Initiative, Wellcome Trust Case Control Consortium, Toby Johnson, Sven Bergmann, Jacques S. Beckmann, Peter Vollenweider, Dawn M. Waterworth, Vincent Mooser, Colin N. Palmer, Andrew D. Morris, Willem H. Ouwehand, Cambridge GEM Consortium, Jing Hua H. Zhao, Shengxu Li, Ruth J. Loos, Inês Barroso, Panagiotis Deloukas, Manjinder S. Sandhu, Eleanor Wheeler, Nicole Soranzo, Michael Inouye, Nicholas J. Wareham, Mark Caulfield, Patricia B. Munroe, Andrew T. Hattersley, Mark I. McCarthy, Timothy M. Frayling posted to association genome linkage snp whole by jsatkosk on 2009-06-09 18:50:28 as along with 2 people xingxu caseybrown
	Resolving Individuals Contributing Trace Amounts of DNA to Highly Complex Mixtures Using High-Density SNP Genotyping Microarrays [My Copy] PLoS Genet, Vol. 4, No. 8. (29 August 2008), e1000167. by Nils Homer, Szabolcs Szelinger, Margot Redman, et al.David Duggan, Waibhav Tembe, Jill Muehling, John V. Pearson, Dietrich A. Stephan, Stanley F. Nelson, David W. Craig posted to degraded dna forensic microarray snp by jsatkosk on 2009-06-09 18:47:49 as along with 12 people merpublic sansue daforerog dnewburger xingxu dfabbri chrisamiller sometwo jasonbobe djkt rs fpattyn
	SNP and haplotype mapping for genetic analysis in the rat [My Copy] Nat Genet, Vol. 40, No. 5. (May 2008), pp. 560-566. posted to discovery linkage snp by jsatkosk on 2009-06-06 00:24:18 as along with 1 person guhjy
	SNP discovery in swine by reduced representation and high throughput pyrosequencing [My Copy] BMC Genetics, Vol. 9 (04 December 2008), 81. by Ralph, Dan J. Nonneman posted to discovery pyrosequencing reduced representation snp by jsatkosk on 2009-06-06 00:09:36 as
	A systematic search for SNPs/haplotypes associated with disease phenotypes using a haplotype-based stepwise procedure [My Copy] BMC Genetics, Vol. 9, No. 1. (2008) by Yin Yang, Shuying S. Li, Jason Chien, Jessica Andriesen, Lue P. Zhao posted to algorithm discovery disease linkage snp by jsatkosk on 2009-06-05 23:54:54 as along with 3 people gdv guhjy pkonings
	Single nucleotide polymorphism (SNP) discovery in duplicated genomes: intron-primed exon-crossing (IPEC) as a strategy for avoiding amplification of duplicated loci in Atlantic salmon (Salmo salar) and other salmonid fishes [My Copy] BMC Genomics, Vol. 7 (27 July 2006), 192. by Heikki J. Ryynanen, Craig R. Primmer posted to cnv discovery intron sequence snp by jsatkosk on 2009-06-05 23:16:54 as along with 1 person Terkko
	Assessing statistical power of SNPs for population structure and conservation studies [My Copy] Molecular Ecology Resources, Vol. 9, No. 1. (January 2009), pp. 66-73. by Phillip A. Morin, Karen K. Martien, Barbara L. Taylor posted to conservation genetics population snp structure by jsatkosk on 2009-06-05 23:15:10 as
	Estimating the number of unseen variants in the human genome. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 106, No. 13. (31 March 2009), pp. 5008-5013. by I. Ionita-Laza, C. Lange, N. M Laird posted to algorithm cnv sequencing snp by jsatkosk on 2009-06-05 22:08:56 as along with 5 people giovanni TRHvidsten pkonings guhjy benjaminsb
	Primate phylogenomics: developing numerous nuclear non-coding non-repetitive markers for ecological and phylogenetic applications and analysis of evolutionary rate variation [My Copy] BMC Genomics, Vol. 10, 247. by Zuogang Peng, Navin Elango, Derek E. Wildman, Soojin V. Yi posted to cross-species discovery dna genome genotyping phylogeny primate snp by jsatkosk on 2009-06-05 22:04:25 as
	Multilocus Bayesian meta-analysis of gene-disease associations. [My Copy] American journal of human genetics, Vol. 84, No. 5. (May 2009), pp. 567-580. by P. J. Newcombe, C. Verzilli, J. P. Casas, A. D. Hingorani, L. Smeeth, J. C. Whittaker posted to algorithm association disease gene snp by jsatkosk on 2009-06-05 19:59:36 as along with 1 person daforerog
	Genome-wide Association Analysis Identifies PDE4D as an Asthma-Susceptibility Gene [My Copy] The American Journal of Human Genetics, Vol. 84, No. 5. (15 May 2009), pp. 581-593. by Blanca E. Himes, Gary M. Hunninghake, James W. Baurley, et al.Nicholas M. Rafaels, Patrick Sleiman, David P. Strachan, Jemma B. Wilk, Saffron A. Willis-Owen, Barbara Klanderman, Jessica Lasky-Su posted to association asthma genotyping linkage snp by jsatkosk on 2009-06-05 19:49:39 as
	Whole genome amplification and real-time PCR in forensic casework [My Copy] BMC Genomics, Vol. 10 (14 April 2009), 159. by Emiliano, Giuseppe Novelli posted to degraded dna forensic genome genotype inconsistency sequencing snp taqman whole by jsatkosk on 2009-06-05 19:47:03 as along with 1 person guhjy
	Quantitative PCR assessment of microsatellite and SNP genotyping with variable quality DNA extracts [My Copy] Conservation Genetics, Vol. 10, No. 3. (1 June 2009), pp. 779-784. by Nathan Campbell, Shawn Narum posted to degraded dna genotype microsatellite pcr quantitative snp by jsatkosk on 2009-06-05 19:42:14 as
	Gene mapping in the wild with SNPs: guidelines and future directions [My Copy] Genetica by Jon Slate, Jake Gratten, Dario Beraldi, Jessica Stapley, Matt Hale, Josephine Pemberton posted to discovery gene linkage mapping population qtl snp wild by jsatkosk on 2009-06-05 19:34:49 as along with 2 people natstreet druvus
	High-resolution haplotype block structure in the cattle genome [My Copy] BMC Genetics, Vol. 10 (24 April 2009), 19. by Rafael, John J. Grefenstette posted to linkage snp by jsatkosk on 2009-06-05 19:29:34 as
	Robust physical methods that enrich genomic regions identical by descent for linkage studies: confirmation of a locus for osteogenesis imperfecta [My Copy] BMC Genetics, Vol. 10 (30 March 2009), 16. by Peter, Anne Philippi posted to linkage snp study by jsatkosk on 2009-06-05 19:27:20 as
	Single nucleotide polymorphism (SNP) discovery in mammals: a targeted-gene approach [My Copy] Molecular Ecology, Vol. 13, No. 6. (2004), pp. 1423-1431. by Nicola Aitken, Steven Smith, Carsten Schwarz, Phillip A. Morin posted to discovery primate snp by jsatkosk on 2009-06-05 19:24:13 as

Note: You may cite this page as: http://www.citeulike.org/user/jsatkosk/tag/snp

snp	40
disease	15
association	14
linkage	14
dna	12
genome	11
algorithm	10
discovery	9
population	9
cnv	8
degraded	8
genotype	7
human	7
macaque	7
primate	7
sequencing	7
microsatellite	6
whole	6
forensic	5
genetics	5
diversity	4
gene	4
genotyping	4
microarray	4
mulatta	4
mutation	4
pcr	4
quantitative	4
sequence	4
alignment	3
analysis	3
asthma	3
fascicularis	3
feces	3
genetic	3
hapmap	3
phenotype	3
aim	2
bioinformatics	2
cross-species	2
error	2
heterozygosity	2
identification	2
inconsistency	2
mapping	2
mirna	2
mitochondria	2
phylogeny	2
polymorphism	2
qtl	2
rate	2
reduced	2
representation	2
structure	2
study	2
wide	2
abo	1
admixture	1
ambiguous	1
amplification	1
bioperl	1
blood	1
browser	1
by	1
canine	1
component	1
conservation	1
database	1
distance	1
drift	1
expression	1
flanking	1
flow	1
functional	1
groups	1
haplotype	1
heteroplasmy	1
hybridization	1
indel	1
intron	1
introns	1
isolation	1
landscape	1
library	1
lvh	1
malaria	1
mtdna	1
nih	1
nuclear	1
of	1
pedigree	1
pigmentation	1
principal	1
pyrosequencing	1
real-time	1
recombination	1
region	1
research	1
rna	1
sampling	1
sex	1
siv	1
speciation	1
statistics	1
taqman	1
vaccine	1
virus	1
wild	1

jsatkosk's snp [40 articles] Export

jsatkosk's tags