Identification of tunnels in proteins, nucleic acids, inorganic materials and molecular ensembles. Export

@article{citeulike:1966944, abstract = {The knowledge of the access paths connecting interior of molecular systems with surrounding environment is important for the understanding of structurefunction relationships and engineering of molecules for biotechnological applications. CAVER is a computer program developed for calculations of tunnels, channels or pores in the biomolecules, inorganic materials and molecular ensembles. The algorithm performs a skeleton search based on a reciprocal distance function grid. The algorithm is implemented in the stand-alone version, web version and as plug-in for PyMol. CAVER is available from the website http://loschmidt.chemi.muni.cz/caver.}, address = {Loschmidt Laboratories, Masaryk University, Brno, Czech Republic. jiri@chemi.muni.cz}, author = {Damborsk\'{y}, J. and Petrek, M. and Ban\'{a}s, P. and Otyepka, M.}, citeulike-article-id = {1966944}, citeulike-linkout-0 = {http://dx.doi.org/10.1002/biot.200600208}, citeulike-linkout-1 = {http://view.ncbi.nlm.nih.gov/pubmed/17183511}, citeulike-linkout-2 = {http://www.hubmed.org/display.cgi?uids=17183511}, doi = {10.1002/biot.200600208}, issn = {1860-7314}, journal = {Biotechnol J}, keywords = {caver, cavities, protein\_channels, structural\_bioinformatics}, month = {January}, number = {1}, pages = {62--67}, posted-at = {2007-11-23 15:17:20}, priority = {2}, title = {Identification of tunnels in proteins, nucleic acids, inorganic materials and molecular ensembles.}, url = {http://dx.doi.org/10.1002/biot.200600208}, volume = {2}, year = {2007} }

TY - JOUR ID - citeulike:1966944 L3 - citeulike-article-id:1966944 N2 - The knowledge of the access paths connecting interior of molecular systems with surrounding environment is important for the understanding of structurefunction relationships and engineering of molecules for biotechnological applications. CAVER is a computer program developed for calculations of tunnels, channels or pores in the biomolecules, inorganic materials and molecular ensembles. The algorithm performs a skeleton search based on a reciprocal distance function grid. The algorithm is implemented in the stand-alone version, web version and as plug-in for PyMol. CAVER is available from the website http://loschmidt.chemi.muni.cz/caver. IS - 1 JF - Biotechnol J SN - 1860-7314 AD - Loschmidt Laboratories, Masaryk University, Brno, Czech Republic. jiri@chemi.muni.cz EP - 67 TI - Identification of tunnels in proteins, nucleic acids, inorganic materials and molecular ensembles. VL - 2 SP - 62 KW - caver KW - cavities KW - protein_channels KW - structural_bioinformatics AU - Damborský, J AU - Petrek, M AU - Banás, P AU - Otyepka, M PY - 2007/01// UR - http://dx.doi.org/10.1002/biot.200600208 ER -