jwm's structural_bioinformatics [92 articles] Export

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	RNA structure comparison, motif search and discovery using a reduced representation of RNA conformational space [My Copy] Nucl. Acids Res., Vol. 31, No. 16. (15 August 2003), pp. 4755-4761. by Carlos M. Duarte, Leven M. Wadley, Anna M. Pyle posted to structural_bioinformatics rna by jwm on 2009-10-22 11:19:44 as along with 4 people and 3 groups marcius j3xucite condon emidio_capriotti beta BioinfoCIPF SGU-CIPF
	Prediction of local structure in proteins using a library of sequence-structure motifs. [My Copy] Journal of molecular biology, Vol. 281, No. 3. (21 August 1998), pp. 565-577. by C. Bystroff, D. Baker posted to structural_bioinformatics by jwm on 2009-09-27 10:02:05 as along with 2 people wouterboomsma dgront
	HMMSTR: a hidden Markov model for local sequence-structure correlations in proteins1 [My Copy] Journal of Molecular Biology, Vol. 301, No. 1. (04 August 2000), pp. 173-190. by Christopher Bystroff, Vesteinn Thorsson, David Baker posted to structural_bioinformatics hmm by jwm on 2009-09-26 16:18:35 as along with 5 people and 1 group wouterboomsma j3xucite dgront rabio wenhan MBLAB
	Toward the detection and validation of repeats in protein structure. [My Copy] Proteins, Vol. 57, No. 2. (1 November 2004), pp. 365-380. by Kevin B. Murray, William R. Taylor, Janet M. Thornton posted to structural_bioinformatics by jwm on 2009-09-26 14:16:59 as
	Algorithms for finding the axis of a helix: fast rotational and parametric least-squares methods. [My Copy] Computers & chemistry, Vol. 20, No. 3. (September 1996), pp. 339-345. by J. A. Christopher, R. Swanson, T. O. Baldwin posted to structural_bioinformatics helix_axis by jwm on 2009-09-23 13:10:01 as
	DaliLite workbench for protein structure comparison. [My Copy] Bioinformatics (Oxford, England), Vol. 16, No. 6. (1 June 2000), pp. 566-567. by L. Holm, J. Park posted to structural_bioinformatics by jwm on 2009-09-19 18:17:58 as along with 4 people tomjad semin rabio sim82
	Protein structure comparison by alignment of distance matrices. [My Copy] Journal of molecular biology, Vol. 233, No. 1. (5 September 1993), pp. 123-138. by L. Holm, C. Sander posted to structural_bioinformatics structural_alignment by jwm on 2009-09-18 23:02:17 as along with 7 people and 2 groups tjimenez BragilMassoud ana nigham dgront siebertm sim82 structural_bioinformatics Bioinformatics
	Protein sectors: evolutionary units of three-dimensional structure. [My Copy] Cell, Vol. 138, No. 4. (21 August 2009), pp. 774-786. by Najeeb Halabi, Olivier Rivoire, Stanislas Leibler, Rama Ranganathan posted to structural_bioinformatics by jwm on 2009-09-10 09:46:28 as along with 10 people and 1 group yyfwuhan cmzmasek dgront robfsouza pansapiens pablocarb vvoorr biomcgary dayjm jbhiatt Marcotte_Lab
	Evolutionary Trace Annotation Server: automated enzyme function prediction in protein structures using 3D templates. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 11. (1 June 2009), pp. 1426-1427. by R. Matthew Ward, Eric Venner, Bryce Daines, et al.Stephen Murray, Serkan Erdin, David M. Kristensen, Olivier Lichtarge posted to structural_bioinformatics by jwm on 2009-08-07 11:14:35 as along with 1 person and 1 group sobolevnrm baker-group
	Biopython: freely available Python tools for computational molecular biology and bioinformatics [My Copy] Bioinformatics, Vol. 25, No. 11. (1 June 2009), pp. 1422-1423. by Peter J. A. Cock, Tiago Antao, Jeffrey T. Chang, et al.Brad A. Chapman, Cymon J. Cox, Andrew Dalke, Iddo Friedberg, Thomas Hamelryck, Frank Kauff, Bartek Wilczynski, Michiel J. L. de Hoon posted to structural_bioinformatics by jwm on 2009-08-06 19:14:49 as along with 37 people and 9 groups Geknitics pekrau Sergey_gerbek hwright jfr karinaecomp applebyb klexa rdiaz FabienneGranier thegoose oteri cmzmasek guhjy AlexBateman daforerog ltitodem Thaverkamp sobolevnrm psique dswan neils dullhunk bertelsen Vincent_Rouilly gwallau brianb jorisslob svenrahmann jmeppley VGreiff sjcockell druvus jago kshameer operon svozil Systems_Biology Computational_Systems_Biology Structural Biology Group TorVergata Journal picks baker-group Bioinformatics Software-Architecture OER_Open_Educational_Resources Method_Engineering_Services
	An analysis of protein domain linkers: their classification and role in protein folding. [My Copy] Protein Eng, Vol. 15, No. 11. (November 2002), pp. 871-879. by R. A. George, J. Heringa posted to protein_design structural_bioinformatics by jwm on 2009-04-30 16:16:56 as along with 5 people and 1 group taikoo carlosjavierna Einat madhadron IrinaMoreira structural_bioinformatics
	Dictionary of protein secondary structure: Pattern recognition of hydrogen-bonded and geometrical features [My Copy] Biopolymers, Vol. 22, No. 12. (December 1983), pp. 2577-2637. by Wolfgang Kabsch, Christian Sander posted to structural_bioinformatics by jwm on 2009-01-12 13:28:30 as along with 32 people barmak7282 Vadikus j3xucite scampos TLVincent maria_hauser pablocarb rpetrenko carlosjavierna mijam wqia007 dsmueller niallhaslam saunders sebk Diego_Prada pjcite kaarsinogen lna chad_davis wouterboomsma penka ffranca dgront choonpeng rabio gisle medic0747 martainn chgjb mschofie marti
	Algorithm for backrub motions in protein design [My Copy] Bioinformatics, Vol. 24, No. 13. (1 July 2008), pp. i196-204. by Ivelin Georgiev, Daniel Keedy, Jane S. Richardson, David C. Richardson, Bruce R. Donald posted to backrub structural_bioinformatics by jwm on 2008-11-25 13:29:05 as along with 2 people dfgreen hmk
	HERA - A program to draw schematic diagrams of protein secondary structures [My Copy] Proteins: Structure, Function, and Genetics, Vol. 8, No. 3. (1990), pp. 203-212. by Gail E. Hutchinson, Janet M. Thornton posted to structural_bioinformatics by jwm on 2008-09-11 17:41:07 as
	A comparison of the heme binding pocket in globins and cytochrome b5 [My Copy] J. Biol. Chem., Vol. 250, No. 18. (25 September 1975), pp. 7525-7532. by M. G. Rossmann, P. Argos posted to evolution structural_bioinformatics by jwm on 2008-07-29 18:07:05 as
	What does structure tell us about virus evolution? [My Copy] Curr Opin Struct Biol (2 November 2005) by Dennis H H. Bamford, Jonathan M M. Grimes, David I I. Stuart posted to evolution structural_bioinformatics virus by jwm on 2008-07-29 17:51:10 as along with 1 person Terkko
	Evolution of binding sites for zinc and calcium ions playing structural roles [My Copy] Proteins: Structure, Function, and Bioinformatics, Vol. 9999, No. 9999. (2007), NA. by James W. Torrance, Malcolm W. Macarthur, Janet M. Thornton posted to structural_bioinformatics structural_templates by jwm on 2008-06-03 18:03:38 as along with 2 people tny grottenolm
	The Chemistry of Protein Catalysis [My Copy] Journal of Molecular Biology, Vol. 372, No. 5. (5 October 2007), pp. 1261-1277. by Gemma L. Holliday, Daniel E. Almonacid, John B. Mitchell, Janet M. Thornton posted to structural_bioinformatics by jwm on 2008-06-03 18:03:01 as along with 7 people and 2 groups barry ucbcjbm cjeans zwang grottenolm sim82 gemmalholliday structural_bioinformatics Bioinformatics
	Molecular docking for substrate identification: the short-chain dehydrogenases/reductases. [My Copy] J Mol Biol, Vol. 375, No. 3. (18 January 2008), pp. 855-874. by A. D. Favia, I. Nobeli, F. Glaser, J. M. Thornton posted to structural_bioinformatics by jwm on 2008-06-03 17:57:30 as along with 2 people ucbcjbm grottenolm
	The geometry of interactions between catalytic residues and their substrates. [My Copy] J Mol Biol, Vol. 369, No. 4. (15 June 2007), pp. 1140-1152. by J. W. Torrance, G. L. Holliday, J. B. Mitchell, J. M. Thornton posted to structural_bioinformatics by jwm on 2008-06-03 13:02:47 as along with 3 people ucbcjbm grottenolm gemmalholliday
	Shape Variation in Protein Binding Pockets and their Ligands. [My Copy] J Mol Biol, Vol. 368, No. 1. (20 April 2007), pp. 283-301. by A. Kahraman, R. J. Morris, R. A. Laskowski, J. M. Thornton posted to ligand_sites structural_bioinformatics by jwm on 2008-06-03 13:02:23 as along with 4 people babakap grottenolm martainn tjimenez
	Towards Fully Automated Structure-based Function Prediction in Structural Genomics: A Case Study [My Copy] Journal of Molecular Biology, Vol. 367, No. 5. (13 April 2007), pp. 1511-1522. by James D. Watson, Steve Sanderson, Alexandra Ezersky, et al.Alexei Savchenko, Aled Edwards, Christine Orengo, Andrzej Joachimiak, Roman A. Laskowski, Janet M. Thornton posted to structural_bioinformatics structural_genomics by jwm on 2008-06-03 13:02:06 as along with 4 people and 2 groups ana tjimenez nickolay grottenolm structural_bioinformatics Bioinformatics
	MACiE (Mechanism, Annotation and Classification in Enzymes): novel tools for searching catalytic mechanisms. [My Copy] Nucleic Acids Res, Vol. 35, No. Database issue. (January 2007) by G. L. Holliday, D. E. Almonacid, G. J. Bartlett, et al.N. M. O'Boyle, J. W. Torrance, P. Murray-Rust, J. B. Mitchell, J. M. Thornton posted to structural_bioinformatics by jwm on 2008-06-03 13:01:39 as along with 2 people grottenolm dullhunk
	Protein Superfamily Evolution and the Last Universal Common Ancestor (LUCA) [My Copy] Journal of Molecular Evolution by Juan A. G. Ranea, Antonio Sillero, Janet M. Thornton, Christine A. Orengo posted to luca structural_bioinformatics by jwm on 2008-06-03 13:01:22 as along with 5 people and 3 groups ucbcjbm ana barry tny grottenolm MuraLab structural_bioinformatics Bioinformatics
	Understanding the molecular machinery of genetics through 3D structures. [My Copy] Nat Rev Genet (27 December 2007) by Roman A A. Laskowski, Janet M M. Thornton posted to structural_bioinformatics by jwm on 2008-06-03 12:59:47 as along with 4 people sebastien_vigneau grottenolm higueruelo aalibes
	A practical and robust sequence search strategy for structural genomics target selection. [My Copy] Bioinformatics (Oxford, England), Vol. 20, No. 14. (22 September 2004), pp. 2288-2295. by J. E. Bray, R. L. Marsden, S. C. Rison, et al.A. Savchenko, A. M. Edwards, J. M. Thornton, C. A. Orengo posted to structural_bioinformatics structural_genomics by jwm on 2008-06-03 12:58:12 as
	Inactive Enzyme-homologues Find New Function in Regulatory Processes [My Copy] Journal of Molecular Biology, Vol. 340, No. 3. (09 July 2004), pp. 399-404. by Birgit Pils, Jörg Schultz posted to inactive_enzymes structural_bioinformatics by jwm on 2008-06-03 12:48:30 as along with 3 people robfsouza tny Jporci
	Catalysing new reactions during evolution: economy of residues and mechanism. [My Copy] J Mol Biol, Vol. 331, No. 4. (22 August 2003), pp. 829-860. by G. J. Bartlett, N. Borkakoti, J. M. Thornton posted to structural_bioinformatics by jwm on 2008-06-03 12:48:14 as along with 2 people gbart nickolay
	Searching for functional sites in protein structures. [My Copy] Current opinion in chemical biology, Vol. 8, No. 1. (February 2004), pp. 3-7. by S. Jones, J. M. Thornton posted to structural_bioinformatics structural_templates by jwm on 2008-06-03 12:47:20 as along with 7 people and 1 group qluo BragilMassoud LeightonP chrn Einat proteasome nickolay structural_bioinformatics
	Using a library of structural templates to recognise catalytic sites and explore their evolution in homologous families. [My Copy] J Mol Biol, Vol. 347, No. 3. (1 April 2005), pp. 565-581. by J. W. Torrance, G. J. Bartlett, C. T. Porter, J. M. Thornton posted to structural_bioinformatics structural_templates by jwm on 2008-06-03 12:46:47 as along with 4 people and 1 group chrn Einat alexg gbart structural_bioinformatics
	Progress of structural genomics initiatives: an analysis of solved target structures. [My Copy] J Mol Biol, Vol. 348, No. 5. (20 May 2005), pp. 1235-1260. by A. E. Todd, R. L. Marsden, J. M. Thornton, C. A. Orengo posted to structural_bioinformatics by jwm on 2008-06-03 12:46:26 as along with 2 people and 2 groups bicko marcius BioinfoCIPF SGU-CIPF
	The complement of enzymatic sets in different species. [My Copy] J Mol Biol, Vol. 349, No. 4. (17 June 2005), pp. 745-763. by S. Freilich, R. V. Spriggs, R. A. George, B. Al-Lazikani, M. Swindells, J. M. Thornton posted to structural_bioinformatics by jwm on 2008-06-03 12:45:50 as along with 2 people gbart tny
	Predicting protein function from sequence and structural data. [My Copy] Current opinion in structural biology, Vol. 15, No. 3. (June 2005), pp. 275-284. by J. D. Watson, R. A. Laskowski, J. M. Thornton posted to structural_bioinformatics by jwm on 2008-06-03 12:45:15 as along with 3 people flbarroso tjimenez kuhn
	Protein Function Prediction Using Local 3D Templates. [My Copy] J Mol Biol (11 July 2005) by Roman A A. Laskowski, James D D. Watson, Janet M M. Thornton posted to structural_bioinformatics structural_templates by jwm on 2008-06-03 12:44:58 as along with 7 people mdimmic shadowman chrn gbart MaggieYe siebertm yoonk
	A method for localizing ligand binding pockets in protein structures. [My Copy] Proteins, Vol. 62, No. 2. (1 February 2006), pp. 479-488. by F. Glaser, R. J. Morris, R. J. Najmanovich, R. A. Laskowski, J. M. Thornton posted to ligand_sites structural_bioinformatics by jwm on 2008-06-03 12:44:33 as along with 4 people tjimenez nickolay sriram_s bilab
	Introduction. Bioinformatics: from molecules to systems. [My Copy] Philosophical transactions of the Royal Society of London. Series B, Biological sciences, Vol. 361, No. 1467. (29 March 2006), pp. 389-391. by D. T. Jones, M. J. Sternberg, J. M. Thornton posted to bioinformatics structural_bioinformatics by jwm on 2008-06-03 12:44:07 as along with 1 person yuslinaz
	One fold with many functions: the evolutionary relationships between TIM barrel families based on their sequences, structures and functions. [My Copy] Journal of molecular biology, Vol. 321, No. 5. (30 August 2002), pp. 741-765. by Nozomi Nagano, Christine A. Orengo, Janet M. Thornton posted to structural_bioinformatics tim_barrel by jwm on 2008-06-03 12:42:44 as along with 2 people martainn tjimenez
	Conservation helps to identify biologically relevant crystal contacts. [My Copy] Journal of molecular biology, Vol. 313, No. 2. (19 October 2001), pp. 399-416. by W. S. Valdar, J. M. Thornton posted to crystal_contacts structural_bioinformatics by jwm on 2008-06-03 12:42:01 as along with 3 people bicko cjeans Evangelia
	A database and tools for 3-D protein structure comparison and alignment using the Combinatorial Extension (CE) algorithm. [My Copy] Nucleic acids research, Vol. 29, No. 1. (1 January 2001), pp. 228-229. by I. N. Shindyalov, P. E. Bourne posted to structural_bioinformatics by jwm on 2008-06-02 10:11:56 as
	Andante: reducing side-chain rotamer search space during comparative modeling using environment-specific substitution probabilities. [My Copy] Bioinformatics (Oxford, England), Vol. 23, No. 9. (1 May 2007), pp. 1099-1105. by Richard E. Smith, Simon C. Lovell, David F. Burke, Rinaldo W. Montalvao, Tom L. Blundell posted to protein_engineering structural_bioinformatics by jwm on 2008-05-19 11:09:42 as along with 3 people bicko semin carlk
	A molecular viewer for the analysis of TLS rigid-body motion in macromolecules [My Copy] Acta Crystallographica Section D Biological Crystallography by P. &. Painter posted to structural_bioinformatics by jwm on 2008-04-15 12:57:30 as
	Transformations to optimize the superposition of similar structures [My Copy] Acta Crystallographica Section A, Vol. 35, No. 1. (Jan 1979), pp. 158-163. by W. A. Hendrickson posted to structural_alignment structural_bioinformatics by jwm on 2008-03-04 09:58:36 as
	Sequence alignment for molecular replacement. [My Copy] Acta crystallographica. Section D, Biological crystallography, Vol. 64, No. Pt 1. (January 2008), pp. 25-32. by Geoffrey J. Barton posted to molecular_replacement structural_bioinformatics xtal_methods xtal_software by jwm on 2008-02-20 10:38:14 as along with 1 person yuslinaz
	MolProbity: all-atom contacts and structure validation for proteins and nucleic acids. [My Copy] Nucleic Acids Res, Vol. 35, No. Web Server issue. (1 July 2007) by I. W. Davis, A. Leaver-Fay, V. B. Chen, et al.J. N. Block, G. J. Kapral, X. Wang, L. W. Murray, W. B. Arendall, J. Snoeyink, J. S. Richardson, D. C. Richardson posted to protein_structure_validation structural_bioinformatics xtal_methods by jwm on 2007-12-12 13:41:04 as along with 1 person jteyra
	MUSTANG: A multiple structural alignment algorithm [My Copy] Proteins: Structure, Function, and Bioinformatics, Vol. 64, No. 3. (2006), pp. 559-574. by Arun S. Konagurthu, James C. Whisstock, Peter J. Stuckey, Arthur M. Lesk posted to structural_alignment structural_bioinformatics by jwm on 2007-12-06 10:43:13 as along with 5 people and 3 groups robfsouza karbak ana rabio Thaverkamp structural_bioinformatics Bioinformatics Microbial-Ecology
	Multiple flexible structure alignment using partial order graphs. [My Copy] Bioinformatics (3 March 2005) by Yuzhen Ye, Adam Godzik posted to structural_alignment structural_bioinformatics by jwm on 2007-12-06 10:36:43 as along with 2 people and 2 groups ana aalibes structural_bioinformatics Bioinformatics
	The Protein Data Bank: a computer-based archival file for macromolecular structures. [My Copy] Journal of molecular biology, Vol. 112, No. 3. (25 May 1977), pp. 535-542. by F. C. Bernstein, T. F. Koetzle, G. J. Williams, et al.E. F. Meyer, M. D. Brice, J. R. Rodgers, O. Kennard, T. Shimanouchi, M. Tasumi posted to historical_interest structural_bioinformatics by jwm on 2007-11-30 17:05:07 as along with 2 people ubcg08l j3xucite
	MAMMOTH (matching molecular models obtained from theory): an automated method for model comparison. [My Copy] Protein science : a publication of the Protein Society, Vol. 11, No. 11. (1 November 2002), pp. 2606-2621. by Angel R. Ortiz, Charlie E. Strauss, Osvaldo Olmea posted to structural_bioinformatics by jwm on 2007-11-27 13:52:57 as along with 8 people and 2 groups tomjad awarlau ana iakes dimka analogAI sebk tjimenez structural_bioinformatics Bioinformatics
	Identification of tunnels in proteins, nucleic acids, inorganic materials and molecular ensembles. [My Copy] Biotechnol J, Vol. 2, No. 1. (January 2007), pp. 62-67. by J. Damborský, M. Petrek, P. Banás, M. Otyepka posted to caver cavities protein_channels structural_bioinformatics by jwm on 2007-11-23 15:17:20 as
	MOLE: A Voronoi Diagram-Based Explorer of Molecular Channels, Pores, and Tunnels. [My Copy] Structure, Vol. 15, No. 11. (13 November 2007), pp. 1357-1363. by Martin Petřek, Pavlína Košinová, Jaroslav Koča, Michal Otyepka posted to caver cavities protein_channels structural_bioinformatics by jwm on 2007-11-23 15:17:04 as along with 1 person and 1 group sobolevnrm baker-group

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bibtex-import	532
psii	201
xtal_methods	102
protein_design	92
structural_bioinformatics	92
xtal_software	75
crystallization	61
rosetta	54
mn	40
oec	36
radiation_damage	34
phycobilisome	33
exafs	29
phycocyanin	29
protein_engineering	29
bioinformatics	25
psii_site_mutant	23
jwm_author	22
gloeobacter	21
psi	20
ribonucleotide_reductase	20
oec_site_mutant	18
idia	17
stressosome	17
beta_solenoid	16
iron_stress	16
metal_cluster	16
psii_assembly	15
xtal_model_building	15
artificial_photosynthesis	14
psii_chloride	14
psii_exafs	14
protein_docking	13
psii_structure	12
reaction_centre	12
xtal_anomalous	12
chloride	11
phycoerythrin	11
psii_biochemistry	11
xtal_refinement	11
cp43	10
metalloenzyme	10
mn_enzyme	10
pas_domain	10
rogue_d1	10
sequence_alignment	10
xtal_structure	10
beta_helix	9
cavities	9
cyt_b559	9
molecular_dynamics	9
molecular_replacement	9
rotamers	9
xenon	9
allophycocyanin	8
b_subtilis	8
cytochrome_c_oxidase	8
em_methods	8
ferritin	8
genome	8
model_building	8
photosynthesis	8
psb27	8
psbo	8
psii_oec	8
structure	8
chlorophyll	7
cp47	7
cyanobacteria	7
de_novo_protein	7
docking	7
elongatus	7
membrane2soluble	7
microspec	7
oxygen_channel	7
photosynthesis_evolution	7
phycobiliproteins	7
protein_structure_prediction	7
s-state	7
structural_templates	7
ycf48	7
catalase	6
em	6
pcc7002	6
phasing	6
protein_channels	6
protein_structure_validation	6
psii_channel	6
psii_evolution	6
psii_repair	6
ruthenium	6
ankyrin	5
bacterioferritin	5
bioenergy	5
carbonic_anhydrase	5
ccp4	5
cyanidium_caldarium	5
cyanophage	5
d1	5
disulfide	5
electron_microscopy	5
exafs_crsytallography	5
experimental_phasing	5
fab_crystallization	5
historical_interest	5
manganese	5
mn_compounds	5
origin_of_life	5
phycocyanin_structure	5
pitman_shorthand	5
psii_review	5
self_rotation	5
skeletonization	5
structural_genomics	5
x-ray	5
acaryochloris	4
beta_propeller	4
carboxysome	4
chlorophyll_d	4
co_dehydrogenease	4
crystallization_additives	4
data_collection	4
dft	4
electron_tunneling	4
evolution	4
fes_cluster	4
hydrogenase	4
light_harvesting	4
pentapeptide_repeat	4
phylogeny	4
psbp	4
psbq	4
psii_crystallization	4
psii_cyt_b559	4
psii_inhibitors	4
psii_protons	4
psi_supercomplex	4
refinement	4
ribosome	4
structural_alignment	4
synechocystis_methods	4
virus	4
water_soluble_chlorophyll_protein	4
xylanase	4
antifreeze_protein	3
bicarbonate	3
biofuel	3
bromide	3
caged_compounds	3
calcium	3
caver	3
chlamydia	3
cryocrystallography	3
cyt_b6f	3
cytochrome_c	3
directed_evolution	3
em_software	3
energy_transfer	3
epr	3
feff	3
ferritin_cage	3
gpcr	3
gpcr_structure	3
higher_plant_psii	3
humour	3
hybrid_cluster_protein	3
lhcii	3
molecular_simulation	3
nanoparticle	3
p680	3
pcc6803	3
photoreduction	3
phycobilisome_lcm	3
pixe	3
protein_crystallization	3
protein_expression	3
protein_families	3
protein_structure	3
protein_structure_refinement	3
proton_channel	3
psba	3
psii_berlin_group	3
psii_mutations	3
qb_site	3
ribozyme	3
structure_validation	3
synechocystispcc6803	3
tex	3
thermophilic_proteins	3
xafs	3
anomalous_scattering	2
aqueous_electron	2
bby	2
bioinformatics-database	2
botryococcus	2
carbon_fixation	2
channels	2
cryptophyte	2
crystallization_screen	2
cyanthece	2
diiron_carboxylate_protein	2
egad	2
feff8	2
foldamer	2
geochemistry	2
heme	2
heterocyst	2
iron	2
iron_sulfur_cluster	2
latex	2
ligand_sites	2
maquette	2
mass_spectrometry	2
metal_cluster_assembly	2
metalloprotein	2
metal_site_identification	2
minimal_genome	2
molecular_graphics	2
oec_ca_site	2
oec_design	2
oxygen	2
post-translational_modification	2
prochlorococcus	2
protein_biochemistry	2
protein_cage	2
protein_denovo_design	2
protein_grammar	2
protein_knots	2
protein_redesign	2
protein_template_matching	2
psii_acceptor_side	2
psii_bicarbonate	2
psii_epr	2
psii_photoactivation	2
psii_small_subunits	2
psi_structure	2
pyp	2
quantum_chemistry	2
raddose	2
ribosome_structure	2
sgc	2
sr	2
s-state_cycle	2
structure_review	2
synthetic_water_oxidation	2
thermophile	2
thermosynechococcus	2
validation	2
vault	2
virus_evolution	2
water_channel	2
water_oxidation	2
xtal_twinning	2
ycf12	2
abc_transporter	1
alternative_oxidase	1
amyloid	1
antibody_crystallization	1
arg357	1
arthrospira	1
artificial_life	1
astex	1
azurin	1
backrub	1
bacteriorhodopsin	1
bayes	1
bioenergetics	1
biological_complexity	1
blunder	1
buffers	1
ca	1
cadmium	1
carbon_monoxide_dehydrogenase	1
carotenoids	1
casp	1
cavenv	1
cavity	1
chaperone	1
chemical_complementation	1
chlorophyll_fluorescence	1
citation	1
co2_fixation	1
combinatorial_screening	1
complex_i	1
complex_ii	1
computer_science	1
counter-diffusion	1
cryophotolysis	1
crystal_contacts	1
crystallization_antibody	1
crystallization_vapour_diffusion	1
crystal_structure	1
culture_media	1
cyanidioschyzon_merolae	1
cyanobacteria_isolate	1
cyclic_electron_transfer	1
cyt_c550	1
cytochrome	1
d1_processing	1
d1_turnover	1
data_processing	1
dcmu	1
deep_biosphere	1
dinoflagellate	1
dinuclear	1
dna	1
dna_binding	1
dna_lattice	1
dna_structure	1
drug_design	1
em_reconstruction	1
entropy	1
enzyme_design	1
eukaryotic	1
extremophile	1
ferredoxin	1
fluorescence	1
fmo	1
fragment_based_screening	1
fret	1
ftsh	1
genetic_code	1
geometric_hashing	1
gfp	1
gromacs	1
gta	1
heavy_atom_derivatization	1
helix_axis	1
hmm	1
icosahedron	1
image_integration	1
inactive_enzymes	1
inference	1
inhibitor	1
iridium	1
laccase	1
laue	1
lhc	1
lipidic_cubic_phase	1
luca	1
manganese_catalase	1
membrane_protein_expression	1
met	1
meta	1
metalloenzymes	1
methods	1
microbial_culture	1
micropixe	1
molecular_biology	1
nitrite_reductase	1
nitrogenase	1
non_oxygenic_photosynthesis	1
nucleation	1
nucleic_acid_builder	1
nucleosome	1
oec_scaffold	1
oec_site_mutation	1
oec_variant	1
o-obond_formation	1
orange_carotenoid_protein	1
origin_photosynthesis	1
paoli	1
pcb	1
peptidyl_prolyl_isomerase	1
pest	1
phage	1
phage_d1	1
phaser	1
photochemistry	1
photovoltaic	1
phycobiliprotein	1
phycobilisome_degradation	1
phycobilisome_structure	1
phycoerythrobilin	1
phylogenetic_tree	1
physical_methods	1
pore	1
prata	1
protein_classification	1
protein_coupled_electron_transfer	1
protein_derivatization	1
protein_evolution	1
protein_gramman	1
protein_lattice_design	1
protein_methods	1
protein_oligomeric_state	1
protein_purification	1
protein_simulation	1
protocols	1
proton_pump	1
psb28	1
psb29	1
psb30	1
psbu	1
psi_crystallization	1
psii_channels	1
psii_charge_separation	1
psii_dft	1
psii_em	1
psii_energy_transfer	1
psii_extrinsics	1
psii_higher_plant	1
psii_mimic	1
psii_preparation	1
psii_purification	1
psii_qmmm	1
psii_radiation_damage	1
psii_site_mutants	1
psii_site_mutation	1
psii_strontium	1
psii_supercomplex	1
psii_theory	1
psii_thermodynamics	1
psii_xtal	1
purple_reaction_centre	1
qsite	1
refereeing	1
reference_data	1
respiratory_chain	1
retraction	1
ribonuclease_p	1
ribosome_crystallization	1
ribosomes	1
rna	1
rrna	1
rsbs	1
sacb	1
sensing	1
shelxd	1
single_crystal_techniques	1
singlet_oxygen	1
solvated_electron	1
spectroscopy	1
split_gfp	1
sponge_phase	1
state_transitions	1
strontium	1
succinate_dehydrogenase	1
supercomplex	1
support_vector_machine	1
symmetry	1
synchrotron	1
synthetic_biology	1
systems_biology	1
textbook	1
tim_barrel	1
time-resolved	1
transferrin	1
trypsin	1
web_server	1
wet_protocols	1
wolffia	1
xtal_density_modification	1
yd	1
zinc_finger	1

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