kentz's library 381 articles Export

	Statistical Construction of Chemical Reaction Mechanisms from Measured Time-Series [My Copy] Journal of Physical Chemistry, Vol. 99, No. 3. (1 January 1995), pp. 970-979. by A. Arkin, J. Ross posted to time-delay correlation by kentz on 2009-11-06 17:20:03 as
	Comprehensive Identification of Cell Cycle-regulated Genes of the Yeast Saccharomyces cerevisiae by Microarray Hybridization [My Copy] Molecular Biology of the Cell, Vol. 9, No. 12. (1 December 1998), pp. 3273-3297. by P. T. Spellman, G. Sherlock, M. Q. Zhang, et al.V. R. Iyer, K. Anders, M. B. Eisen, P. O. Brown, D. Botstein, B. Futcher posted to yeast data-sets by kentz on 2009-11-05 16:41:28 as along with 13 people and 1 group jperkins felden Borelli lfriedl balajis nirfriedman jacky957 johncumbers timflutre bootsy mimulus_99 dbenn tvdbulck kdl
	Identification of genetic networks from a small number of gene expression patterns under the Boolean network model [My Copy] In Pacific Symposium on Biocomputing (1999), pp. 17-28. by T. Akutsu, S. Miyano, S. Kuhara posted to boolean-networks by kentz on 2009-11-05 11:23:45 as
	Modeling the complexity of genetic networks: Understanding multigenic and pleiotropic regulation [My Copy] Complexity, Vol. 1 (1996), pp. 45-63. by R. Somogyi, C. Sniegoski posted to boolean-networks by kentz on 2009-11-05 11:19:27 as along with 1 person and 1 group dlobo GEB
	Biological networks [My Copy] Current Opinion in Structural Biology, Vol. 13, No. 2. (April 2003), pp. 193-202. by E. Alm, A. P. Arkin posted to systems-biology complex-networks by kentz on 2009-11-03 16:04:53 as along with 3 people sergiun cmmorel Borelli
	Global Mapping of the Yeast Genetic Interaction Network [My Copy] Science, Vol. 303, No. 5659. (6 February 2004), pp. 808-813. by Amy H. Tong, Guillaume Lesage, Gary D. Bader, et al.Huiming Ding, Hong Xu, Xiaofeng Xin, James Young, Gabriel F. Berriz, Renee L. Brost, Michael Chang, YiQun Chen, Xin Cheng, Gordon Chua, Helena Friesen, Debra S. Goldberg, Jennifer Haynes, Christine Humphries, Grace He, Shamiza Hussein, Lizhu Ke, Nevan Krogan, Zhijian Li, Joshua N. Levinson, Hong Lu, Patrice Menard, Christella Munyana, Ainslie B. Parsons, Owen Ryan, Raffi Tonikian, Tania Roberts, Anne-Marie Sdicu, Jesse Shapiro, Bilal Sheikh, Bernhard Suter, Sharyl L. Wong, Lan V. Zhang, Hongwei Zhu, Christopher G. Burd, Sean Munro, Chris Sander, Jasper Rine, Jack Greenblatt, Matthias Peter, Anthony Bretscher, Graham Bell, Frederick P. Roth, Grant W. Brown, Brenda Andrews, Howard Bussey, Charles Boone posted to complex-networks by kentz on 2009-11-03 11:13:50 as along with 30 people and 2 groups colmryan meanerelk rdowell TheresaNiederberger dakelley kinop nzm roys ajbattle czeller ldfu pcahan1 lfriedl lyongu luispedro opheliav tabu Chue nirfriedman nickluscombe koller raiyar patrycjam patrycja_missiuro jiny chasmand tresch Takayuki ksiek carlk kdl EBI-regulation
	Power laws in biological networks [My Copy] In Power laws, scale-free networks and genome biology (2006), pp. 1-11. by E. Almaas, A. L. Barabasi edited by E. V. Kroonin, Y. I. Wolf, G. P. Karev posted to complex-networks by kentz on 2009-11-02 16:03:53 as
	A duplication growth model of gene expression networks [My Copy] Bioinformatics, Vol. 18, No. 11. (1 November 2002), pp. 1486-1493. by A. Bhan, D. J. Galas, T. G. Dewey posted to complex-networks by kentz on 2009-11-02 11:29:35 as along with 3 people wangbo kaarsinogen gurkanbebek
	The Diameter of a Scale-Free Random Graph [My Copy] Combinatorica, Vol. 24, No. 1. (2004), pp. 5-34. by B. Bollobas, O. Riordan posted to complex-networks by kentz on 2009-10-31 17:36:57 as
	Robustness and vulnerability of scale-free random graphs [My Copy] Internet Mathematics, Vol. 1, No. 1. (2003), pp. 1-35. by B. Bollobas, O. Riordan posted to complex-networks by kentz on 2009-10-31 14:58:45 as
	On the strength of connectedness of a random graph [My Copy] Acta Mathematica Hungarica, Vol. 12 (1961), pp. 261-267. by P. Erdos, A. Renyi posted to complex-networks by kentz on 2009-10-30 15:41:04 as
	On the evolution of random graphs [My Copy] Publ. Math. Inst. Hungar. Acad. Sci, Vol. 5 (1960), pp. 17-61. by P. Erdos, A. Renyi posted to random_graphs by kentz on 2009-10-30 15:38:24 as
	The small-world problem [My Copy] Psychology Today, Vol. 1, No. 1. (1967), pp. 61-67. by S. Milgram posted to complex-networks by kentz on 2009-10-27 11:41:39 as
	Collective dynamics of small-world networks [My Copy] Nature, Vol. 393, No. 6684. (4 June 1998), pp. 440-442. by D. J. Watts, S. H. Strogatz posted to complex-networks by kentz on 2009-10-23 15:44:28 as along with 107 people and 14 groups rrbarb dannya222 jsaramak christianholz ptony82 TomHubbard fastjoe23 soramame_0518 jaia normaali leonglester makrehchi makukha fierykylin briordan vtraag dexter_shen AJCann jobadge thegoose2 tomasha apeyrache acrmartins sergiun Kovanen orahcio theus Adso mattjb dpf kaarsinogen cswinburne jmenche chrisdubois tharris MehdiMoussaid jobriath camster G_RAM kewms KAllendoerfer AdrianMiles mague alexisgallagher zqshen shivaram cmmorel Shirakawa tolosoft nithya nygaard balicea dumpa matteodellamico yoh dullhunk voiklis eldaly ianturton merazzle maqbes muraken zono zeroknowledge choonpeng cerkut xinian mmartin king amac adriandefroment RafG radale jaspervoskuilen timflutre pbrandao sugaya ruvido rsantana cjeans fbaroni michaelmampaey rcrane ransombriggs suizan lpfernandes sbianco kb kaks stefanoallesina beete teferet ladamic iris_2001 livingthingdan jsanpedro jotwin ulmer takeha-e dylanwalker mpotamias jpbarrette Borelli jago ddahlem ilkert tomhebbron eLearning in Leicester Network Data Repository C. elegans / WormBase dbk-lab GraphVis Semantic-Social-Networks microRNA Web2 Soslab CooperationStudies ColDyn contact-id ADMiRes 8_01
	Multi-objective Model Optimization for Inferring Gene Regulatory Networks [My Copy] Evolutionary Multi-Criterion Optimization In Evolutionary Multi-Criterion Optimization (2005), pp. 607-620. by C. Spieth, F. Streichert, N. Speer, A. Zell posted to s-system reveng by kentz on 2009-10-20 12:22:01 as
	Genetic network reverse-engineering and network size; can we identify large GRNs? [My Copy] In Proceedings of the Computational Intelligence in Bioinformatics and Computational Biology (CIBCB 2004) (2004), pp. 32-36. by C. Pridgeon, D. Corne posted to reveng by kentz on 2009-10-20 12:19:17 as
	On the difficulty of inferring gene regulatory networks: a study of the fitness landscape generated by relative squared error [My Copy] (2009) by F. Sambo, M. Montes de Oca, B. Di Camillo, T. Stutzle posted to no-tag by kentz on 2009-10-07 17:40:36 as
	Differential Evolution – A Simple and Efficient Heuristic for global Optimization over Continuous Spaces [My Copy] Journal of Global Optimization, Vol. 11, No. 4. (1 December 1997), pp. 341-359. by R. Storn, K. Price posted to optimization by kentz on 2009-10-06 16:23:30 as along with 5 people and 5 groups jstephens andreud nojhan dilbert felixroudier Scout/Leader Systems EvolutionaryComputation Metaheuristics Optimization SORG
	Temporal aggregation and structural inference in macroeconomics [My Copy] In Technical Report 60 (1986) by L. J. Cristiano, M. Eichenbaum posted to no-tag by kentz on 2009-10-01 18:14:00 as
	Temporal Aggregation Bias and Inference of Causal Regulatory Networks [My Copy] Journal of Computational Biology, Vol. 11, No. 5. (October 2004), pp. 971-985. by S. D. Bay, L. Chrisman, A. Pohorille, J. Shrager posted to grn-inference by kentz on 2009-10-01 17:33:32 as
	Inferring qualitative relations in genetic networks and metabolic pathways [My Copy] Bioinformatics, Vol. 16, No. 8. (1 August 2000), pp. 727-734. by T. Akutsu, S. Miyano, S. Kuhara posted to grn-properties by kentz on 2009-10-01 16:03:59 as along with 1 person cgaray
	From specific gene regulation to genomic networks: a global analysis of transcriptional regulation in Escherichia coli [My Copy] Bioessays, Vol. 20, No. 5. (1998), pp. 433-440. by D. Thieffry, A. M. Huerta, E. Pérez-Rueda, J. Collado-Vides posted to grn-properties by kentz on 2009-10-01 13:10:20 as
	Inference of S-system models of genetic networks using a genetic local search [My Copy] In Proceedings of the Congress on Evolutionary Computation (2003), pp. 631-638. by S. Kimura, M. Hatakeyama, A. Konagaya posted to s-system decomposition by kentz on 2009-09-30 14:35:29 as
	Inference of genetic network using the expression profile time course data of mouse P19 cells [My Copy] Genome Informatics, Vol. 13 (2002), pp. 382-383. by Y. Maki, T. Ueda, M. Okamoto, et al.N. Uematsu, K. Inamura, K. Uchida, Y. Takahashi, Y. Eguchi posted to s-system decomposition by kentz on 2009-09-30 14:30:50 as
	Genetic algorithms in search, optimization and machine learning [My Copy] (1989) by D. E. Goldberg posted to ga by kentz on 2009-09-30 12:04:00 as
	A survey of evolution strategies [My Copy] In Proceedings of the Fourth International Conference on Genetic Algorithms (1991), pp. 2-9. by T. Back, F. Hoffmeister, H. P. Schwefel posted to optimization by kentz on 2009-09-29 17:43:02 as
	Stochastic methods [My Copy] In Handbook of Global Optimization (1995), pp. 829-869. by C. Guus, E. Boender, H. E. Romeijn edited by R. Horst, P. M. Pardalos posted to optimization by kentz on 2009-09-29 16:32:56 as
	Inferring a System of Differential Equations for a Gene Regulatory Network by using Genetic Programming [My Copy] In Proceedings of the Congress on Evolutionary Computation (CEC2001) (2001), pp. 720-726. by E. Sakamoto, H. Iba posted to no-tag by kentz on 2009-09-21 17:43:19 as
	Decoupling dynamical systems for pathway identification from metabolic profiles [My Copy] Bioinformatics, Vol. 20, No. 11. (22 July 2004), pp. 1670-1681. by E. O. Voit, J. Almeida posted to s-system by kentz on 2009-09-21 16:44:49 as along with 1 person bertelsen
	Efficient numerical optimization algorithm based on genetic algorithm for inverse problem [My Copy] In Proceedings of the Genetic and Evolutionary Computation Conference (2000), pp. 251-258. by D. Tominaga, N. Koga, N. Okamoto posted to s-system ga by kentz on 2009-09-21 16:07:29 as
	Aligning gene expression time series with time warping algorithms [My Copy] Bioinformatics, Vol. 17, No. 6. (1 June 2001), pp. 495-508. by J. Aach, G. M. Church posted to interpolation by kentz on 2009-09-16 18:34:50 as along with 2 people stharward seninp
	Identification of Gene Interaction Networks Based on Evolutionary Computation [My Copy] Artificial Intelligence and Simulation In Artificial Intelligence and Simulation, Vol. 3397 (2005), pp. 428-439. by S. Jung, K. H. Cho posted to reveng by kentz on 2009-09-16 16:35:25 as
	Reverse engineering of gene regulatory networks [My Copy] IET Systems Biology, Vol. 1, No. 3. (2007), pp. 149-163. by K. H. Cho, S. M. Choo, S. H. Jung, J. R. Kim, H. S. Choi, J. Kim posted to reviews by kentz on 2009-09-16 16:28:13 as
	EXAMINE: A computational approach to reconstructing gene regulatory networks [My Copy] Biosystems, Vol. 81, No. 2. (August 2005), pp. 125-136. by X. Deng, H. Geng, H. Ali posted to reveng ga by kentz on 2009-09-16 16:25:34 as
	Mechanism of eve stripe formation [My Copy] Mechanisms of Development, Vol. 49, No. 1-2. (January 1995), pp. 133-158. by J. Reinitz, D. H. Sharp posted to simulated-annealing reveng by kentz on 2009-09-16 13:40:17 as
	Quantitative noise analysis for gene expression microarray experiments [My Copy] Proceedings of the National Academy of Sciences, Vol. 99, No. 22. (29 October 2002), pp. 14031-14036. by Y. Tu, G. Stolovitzky, U. Klein posted to biotech biology by kentz on 2009-09-16 12:16:51 as along with 1 person ptrobajo
	Noise in gene expression: origins, consequences, and control. [My Copy] Science (New York, N.Y.), Vol. 309, No. 5743. (23 September 2005), pp. 2010-2013. by J. M. Raser, E. K. O'Shea posted to biology by kentz on 2009-09-16 11:01:41 as along with 21 people and 2 groups pkm Zephyrus guhjy thomaskelder bertelsen inesdesantiago ddcttrl rklancer monod dayjm xico nirfriedman koller mhucka margaritis suizan shikin dylanwalker kagibbs klo bpcusack WetBiology GeneGo
	Noise in eukaryotic gene expression. [My Copy] Nature, Vol. 422, No. 6932. (10 April 2003), pp. 633-637. by W. J. Blake, M. Kaern, C. R. Cantor, J. J. Collins posted to gene-regulation by kentz on 2009-09-15 18:38:39 as along with 10 people guhjy katiehumphry ClaireFB rklancer cottrell dbikard margaritis mjoach jiny klo
	Analysis of Variance for Gene Expression Microarray Data [My Copy] Journal of Computational Biology, Vol. 7, No. 6. (December 2000), pp. 819-837. by M. K. Kerr, M. Martin, G. A. Churchill posted to data-sets biotech by kentz on 2009-09-15 18:22:40 as along with 4 people and 1 group daveGerrard pengchy klo vertikalist BTS-PT-AS-CS
	Comparison among five evolutionary-based optimization algorithms [My Copy] Advanced Engineering Informatics, Vol. 19, No. 1. (January 2005), pp. 43-53. by E. Elbeltagi, T. Hegazy, D. Grierson posted to pso ga by kentz on 2009-09-14 17:52:07 as along with 1 person bsrikant
	Modeling of gene regulatory networks with hybrid differential evolution and particle swarm optimization [My Copy] Neural Networks, Vol. 20, No. 8. (October 2007), pp. 917-927. by R. Xu, G. Venayagamoorthy, D. C. Wunsch II posted to rnn reveng pso by kentz on 2009-09-14 17:48:06 as
	A Comparison Of Particle Swarm Optimization And The Genetic Algorithm [My Copy] In 46th AIAA/ASME/ASCE/AHS/ASC Structures, Structural Dynamics, and Materials Conference (2005), pp. 1-13. by R. Hassan, B. Cohanim, O. De Weck, G. Venter posted to pso ga by kentz on 2009-09-14 17:38:15 as
	Optimising Cancer Chemotherapy Using Particle Swarm Optimisation and Genetic Algorithms [My Copy] Parallel Problem Solving from Nature - PPSN VIII In Parallel Problem Solving from Nature (PPSN VIII), Vol. 3242 (2004), pp. 633-641. by A. Petrovski, B. Sudha, J. McCall posted to pso ga by kentz on 2009-09-14 17:20:56 as
	Particle Swarm, Genetic Algorithm, and Their Hybrids: Optimization of a Profiled Corrugated Horn Antenna [My Copy] In IEEE ANTENNAS AND PROPAGATION SOCIETY INTERNATIONAL SYMPOSIUM, Vol. 1 (2002), pp. 314-317. by J. Robinson, S. Sinton, Y. Rahmat-Samii posted to pso ga by kentz on 2009-09-14 17:19:21 as
	Matching algorithms to problems: An experimental test of the particle swarm and some genetic algorithms on the multimodal problem generator [My Copy] In IEEE International Conference on Evolutionary Computation (ICEC'98) (1998), pp. 78-83. by J. Kennedy, W. M. Spears posted to pso ga by kentz on 2009-09-14 17:15:58 as
	Swarm Intelligence: Foundations, Perspectives and Applications [My Copy] Swarm Intelligent Systems In Studies in Computational Intelligence (SCI), Vol. 26 (2006), pp. 3-25. by A. Abraham, H. Guo, H. Liu posted to pso by kentz on 2009-09-14 17:01:03 as
	Biochemical systems analysis of genome-wide expression data [My Copy] Bioinformatics, Vol. 16, No. 11. (1 November 2000), pp. 1023-1037. by E. O. Voit, T. Radivoyevitch posted to s-system by kentz on 2009-09-09 17:08:57 as along with 1 person bertelsen
	Diverse two-dimensional input functions control bacterial sugar genes. [My Copy] Molecular cell, Vol. 29, No. 6. (28 March 2008), pp. 786-792. by S. Kaplan, A. Bren, A. Zaslaver, E. Dekel, U. Alon posted to biology by kentz on 2009-09-09 15:44:25 as along with 3 people agonzale siebert kentsis
	Linear modeling of mRNA expression levels during CNS development and injury [My Copy] In Pacific Symposium on Biocomputing (1999), pp. 41-52. by P. D'Haeseleer, X. Wen, S. Fuhrman, R. Somogyi posted to add-reg-models by kentz on 2009-09-08 16:43:57 as
	Probabilistic Boolean networks: a rule-based uncertainty model for gene regulatory networks [My Copy] Bioinformatics, Vol. 18, No. 2. (1 February 2002), pp. 261-274. by I. Shmulevich, E. R. Dougherty, S. Kim, W. Zhang posted to boolean-networks by kentz on 2009-09-08 12:39:07 as along with 4 people and 1 group wangbo camster eldan ddahlem dbk-lab

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