kgutwin's coiled-coils [138 articles] Export

Recent papers added to kgutwin's library classified by the tag coiled-coils. You can also see everyone's coiled-coils.

	Designation of sequences involved in the "coiled-coil" interdomainal connections in fibrinogen: constructions of an atomic scale model. [My Copy] Journal of molecular biology, Vol. 120, No. 2. (5 April 1978), pp. 311-325. by R. F. Doolittle, D. M. Goldbaum, L. R. Doolittle posted to need-pdf fibrinogen coiled-coils by kgutwin on 2009-09-20 22:47:20 as
	Gene duplication and recruitment of a specific tropomyosin into striated muscle cells in the jellyfish <I>Podocoryne carnea</I> [My Copy] The Journal of Experimental Zoology, Vol. 285, No. 4. (1999), pp. 378-386. by Hans Gröger, Patrick Callaerts, Walter J. Gehring, Volker Schmid posted to tropomyosin coiled-coils by kgutwin on 2009-08-13 22:35:04 as
	Hydra tropomyosin TROP1 is expressed in head-specific epithelial cells and is a major component of the cytoskeletal structure that anchors nematocytes [My Copy] J Cell Sci, Vol. 107, No. 6. (1 June 1994), pp. 1403-1411. by M. S. de Haro, L. M. Salgado, C. N. David, T. C. Bosch posted to tropomyosin coiled-coils by kgutwin on 2009-08-13 20:12:46 as
	Modulation of Myosin Function by Isoform-specific Properties of Saccharomyces cerevisiae and Muscle Tropomyosins [My Copy] J. Biol. Chem., Vol. 276, No. 37. (7 September 2001), pp. 34832-34839. by James Strand, Mahta Nili, Earl Homsher, Larry S. Tobacman posted to tropomyosin coiled-coils by kgutwin on 2009-08-11 21:40:15 as
	Identification of interacting regions within the coiled coil of the Escherichia coli structural maintenance of chromosomes protein MukB. [My Copy] Journal of molecular biology, Vol. 391, No. 1. (7 August 2009), pp. 57-73. by Yinyin Li, Christopher S. Weitzel, Randy J. Arnold, Martha G. Oakley posted to alignment antiparallel coiled-coils expt-evidence litreview2009 smc by kgutwin on 2009-08-05 22:16:45 as along with 1 person carlosjavierna
	A computationally directed screen identifying interacting coiled coils from Saccharomyces cerevisiae. [My Copy] Proc Natl Acad Sci U S A, Vol. 97, No. 24. (21 November 2000), pp. 13203-13208. by J. R. Newman, E. Wolf, P. S. Kim posted to coiled-coils post-defense yeast-2-hybrid by kgutwin on 2009-05-20 23:51:30 as along with 2 people hplatero phoenixzxl
	The specificity of SNARE-dependent fusion is encoded in the SNARE motif. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 101, No. 10. (9 March 2004), pp. 3376-3380. by F. Paumet, V. Rahimian, J. E. Rothman posted to coiled-coils post-defense snare specificity by kgutwin on 2009-05-20 23:32:19 as along with 1 person marck
	Reinterpretation of GCN4-p1 folding kinetics: partial helix formation precedes dimerization in coiled coil folding [My Copy] Journal of Molecular Biology, Vol. 289, No. 2. (04 June 1999), pp. 205-209. by J. Myers posted to coiled-coils folding post-defense by kgutwin on 2009-05-18 21:14:39 as
	Coiled-coil protein composition of 22 proteomes--differences and common themes in subcellular infrastructure and traffic control. [My Copy] BMC evolutionary biology, Vol. 5 (2005) by A. Rose, S. J. Schraegle, E. A. Stahlberg, I. Meier posted to coiled-coils genome multicoil by kgutwin on 2009-05-10 01:28:36 as along with 2 people markchen smit2jam
	Alphavirus Nucleocapsid Protein Contains a Putative Coiled Coil alpha-Helix Important for Core Assembly [My Copy] J. Virol., Vol. 75, No. 1. (1 January 2001), pp. 1-10. by Rushika Perera, Katherine E. Owen, Timothy L. Tellinghuisen, Alexander E. Gorbalenya, Richard J. Kuhn posted to coiled-coils sindbis-virus by kgutwin on 2009-05-10 00:42:13 as
	A heterologous coiled coil can substitute for helix I of the Sindbis virus capsid protein. [My Copy] Journal of virology, Vol. 77, No. 15. (August 2003), pp. 8345-8353. by R. Perera, C. Navaratnarajah, R. J. Kuhn posted to coiled-coils sindbis-virus trimer by kgutwin on 2009-05-09 22:26:58 as
	The structure of ClpB: a molecular chaperone that rescues proteins from an aggregated state. [My Copy] Cell, Vol. 115, No. 2. (17 October 2003), pp. 229-240. by S. Lee, M. E. Sowa, Y. H. Watanabe, et al.P. B. Sigler, W. Chiu, M. Yoshida, F. T. Tsai posted to antiparallel clpb coiled-coils motions by kgutwin on 2009-05-09 22:14:51 as
	Regulation and recycling of myosin V. [My Copy] Current opinion in cell biology, Vol. 19, No. 1. (February 2007), pp. 67-74. by K. A. Taylor posted to coiled-coils myosin by kgutwin on 2009-05-09 20:55:45 as
	Myosin V from head to tail [My Copy] Cellular and Molecular Life Sciences CMLS, Vol. 65, No. 9. (May 2008), pp. 1378-1389. by Trybus, K. posted to coiled-coils myosin review by kgutwin on 2009-05-09 20:50:54 as
	Structure of influenza haemagglutinin at the pH of membrane fusion [My Copy] Nature, Vol. 371, No. 6492. (1994), pp. 37-43. by Per A. Bullough, Frederick M. Hughson, John J. Skehel, Don C. Wiley posted to coiled-coils hemagglutinin by kgutwin on 2009-05-09 19:14:53 as along with 2 people dsmueller penguinpan
	Coiled coil structures and transcription: an analysis of the S. cerevisiae coilome. [My Copy] Mol Genet Genomics (3 May 2007) by Kellie E. Barbara, Kristine A. Willis, Terry M. Haley, Stephen J. Deminoff, George M. Santangelo posted to coiled-coils genome newcoils paircoil predictions by kgutwin on 2009-05-06 21:12:24 as along with 2 people cjeans chgjb
	SYP-3 restricts synaptonemal complex assembly to bridge paired chromosome axes during meiosis in C. elegans. [My Copy] Genetics, Vol. 176 (2007), pp. 2015-2025. by S. Smolikov, A. Eizinger, K. Schild-Prufert, et al.A. Hurlburt, K. Mcdonald, J. Engebrecht, A. M. Villeneuve, M. P. Colaiacovo posted to coiled-coils multicoil predicted-cc by kgutwin on 2009-05-06 21:05:15 as along with 2 people and 1 group thegoose2 tharris C. elegans / WormBase
	Interactions between the Leucine-zipper Motif of cGMP-Dependent Protein Kinase and the C-terminal Region of the Targeting Subunit of Myosin Light Chain Phosphatase [My Copy] Journal of Molecular Biology, Vol. 373, No. 5. (09 November 2007), pp. 1198-1212. by Eunhee Lee, David B. Hayes, Knut Langsetmo, Eric J. Sundberg, Terence C. Tao posted to coiled-coils expt-evidence heterodimer by kgutwin on 2009-05-06 20:57:18 as
	Dynamitin Mutagenesis Reveals ProteinProtein Interactions Important for Dynactin Structure [My Copy] Traffic, Vol. 9, No. 4. (April 2008), pp. 481-491. by Maier, C. Kerstin, Godfrey, et al.E. Jamie, Echeverri, J. Christophe, Cheong, K. Y. Frances, Schroer, A. Trina posted to coiled-coils multicoil spectrin trimer predictions by kgutwin on 2009-05-06 20:28:47 as
	Structures of Dimeric GIT1 and Trimeric β-PIX and Implications for GIT–PIX Complex Assembly [My Copy] Journal of Molecular Biology, Vol. 386, No. 2. (20 February 2009), pp. 280-289. by Oliver Schlenker, Katrin Rittinger posted to coiled-coils dimer trimer by kgutwin on 2009-05-06 20:24:52 as
	Generalized Crick equations for modeling noncanonical coiled coils. [My Copy] Journal of structural biology, Vol. 137, No. 1-2. (b 2002), pp. 41-53. by Gerald Offer, Matthew R. Hicks, Derek N. Woolfson posted to coiled-coils crick-param modeling structure by kgutwin on 2009-05-06 16:02:04 as along with 3 people and 1 group martainn oteri chgjb Structural Biology Group TorVergata
	The design of coiled-coil structures and assemblies. [My Copy] Adv Protein Chem, Vol. 70 (2005), pp. 79-112. by D. N. Woolfson posted to coiled-coils design review by kgutwin on 2009-05-06 15:54:50 as along with 5 people oteri markchen gbartbristol bethbromley ca3295
	Successful prediction of the coiled coil geometry of the GCN4 leucine zipper domain by simulated annealing: comparison to the X-ray structure. [My Copy] Proteins, Vol. 15, No. 2. (February 1993), pp. 133-146. by M. Nilges, A. T. Brünger posted to bzip coiled-coils modeling structure predictions by kgutwin on 2009-05-06 15:49:19 as along with 1 person hplatero
	Automated modeling of coiled coils: application to the GCN4 dimerization region. [My Copy] Protein Eng, Vol. 4, No. 6. (August 1991), pp. 649-659. by M. Nilges, A. T. Brünger posted to coiled-coils modeling predictions by kgutwin on 2009-05-06 15:48:16 as along with 2 people oteri hplatero
	Structure of the Rb C-terminal domain bound to E2F1-DP1: a mechanism for phosphorylation-induced E2F release. [My Copy] Cell, Vol. 123, No. 6. (16 December 2005), pp. 1093-1106. by S. M. Rubin, A. L. Gall, N. Zheng, N. P. Pavletich posted to coiled-coils p-het by kgutwin on 2009-04-30 04:16:59 as along with 1 person catcremona
	Crystal structure of the repetitive segments of spectrin. [My Copy] Science (New York, N.Y.), Vol. 262, No. 5142. (24 December 1993), pp. 2027-2030. by Y. Yan, E. Winograd, A. Viel, T. Cronin, S. C. Harrison, D. Branton posted to alignment coiled-coils spectrin structure by kgutwin on 2009-04-29 20:46:06 as
	Automated design of specificity in molecular recognition. [My Copy] Nat Struct Biol, Vol. 10, No. 1. (January 2003), pp. 45-52. by J. J. Havranek, P. B. Harbury posted to bzip coiled-coils design specificity structure by kgutwin on 2009-04-27 04:42:34 as along with 2 people bethbromley phoenixzxl
	Coiled Coils at the Edge of Configurational Heterogeneity. Structural Analyses of Parallel and Antiparallel Homotetrameric Coiled Coils Reveal Configurational Sensitivity to a Single Solvent-Exposed Amino Acid Substitution [My Copy] Biochemistry, Vol. 45, No. 14. (1 April 2006), pp. 4463-4473. by Maneesh K. Yadav, Luke J. Leman, Daniel J. Price, Charles L. Brooks, David C. Stout, Reza M. Ghadiri posted to antiparallel coiled-coils molecular-mechanics tetramer by kgutwin on 2009-04-27 02:54:30 as
	Crystal structure of a SNARE complex involved in synaptic exocytosis at 2.4 A resolution [My Copy] Nature, Vol. 395, No. 6700. (24 September 1998), pp. 347-353. by Bryan R. Sutton, Dirk Fasshauer, Reinhard Jahn, Axel T. Brunger posted to coiled-coils snare structure by kgutwin on 2009-04-26 03:17:20 as
	A Heterospecific Leucine Zipper Tetramer [My Copy] Chemistry & Biology, Vol. 15, No. 9. (22 September 2008), pp. 908-919. by Y. Deng, J. Liu, Q. Zheng, Q. Li, N. Kallenbach, M. Lu posted to antiparallel coiled-coils design tetramer by kgutwin on 2009-04-26 03:08:42 as along with 1 person markchen
	Cluster expansion models for flexible-backbone protein energetics. [My Copy] Journal of computational chemistry (9 April 2009) by James R R. Apgar, Seungsoo Hahn, Gevorg Grigoryan, Amy E E. Keating posted to cluster-expansion coiled-coils by kgutwin on 2009-04-26 02:52:29 as
	Design of protein-interaction specificity gives selective bZIP-binding peptides [My Copy] Nature, Vol. 458, No. 7240. (16 April 2009), pp. 859-864. by Gevorg Grigoryan, Aaron W. Reinke, Amy E. Keating posted to bzip classy coiled-coils design specificity by kgutwin on 2009-04-26 02:51:42 as along with 7 people carlk kevinchannon pablocarb twatanab absterga phoenixzxl jbhiatt
	Core Structure of gp41 from the HIV Envelope Glycoprotein [My Copy] Cell, Vol. 89, No. 2. (18 April 1997), pp. 263-273. by David C. Chan, Deborah Fass, James M. Berger, Peter S. Kim posted to antiparallel coiled-coils gp41 trimer by kgutwin on 2009-04-26 02:35:39 as
	The coiled coil of in vitro assembled keratin filaments is a heterodimer of type I and II keratins: use of site-specific mutagenesis and recombinant protein expression. [My Copy] The Journal of cell biology, Vol. 110, No. 4. (April 1990), pp. 1199-1210. by M. Hatzfeld, K. Weber posted to coiled-coils expt-evidence keratin by kgutwin on 2009-04-24 23:22:45 as
	Assembly of laminin isoforms by triple- and double-stranded coiled-coil structures. [My Copy] Biochemical Society transactions, Vol. 19, No. 4. (November 1991), pp. 839-843. by J. Engel, I. Hunter, T. Schulthess, K. Beck, T. W. Dixon, D. A. Parry posted to coiled-coils laminin by kgutwin on 2009-04-24 19:12:57 as
	Preferred side-chain constellations at antiparallel coiled-coil interfaces. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 105, No. 2. (15 January 2008), pp. 530-535. by Erik B. Hadley, Oliver D. Testa, Derek N. Woolfson, Samuel H. Gellman posted to antiparallel coiled-coils coupling-energy by kgutwin on 2009-04-23 23:48:34 as along with 5 people zwang phoenixzxl patrickking cjeans chdnw
	An Antiparallel [alpha]-Helical Coiled-Coil Model System for Rapid Assessment of Side-Chain Recognition at the Hydrophobic Interface [My Copy] Journal of the American Chemical Society, Vol. 128, No. 51. (December 2006), pp. 16444-16445. by Erik B. Hadley, Samuel H. Gellman posted to antiparallel coiled-coils coupling-energy by kgutwin on 2009-04-23 23:46:57 as
	Dimerization specificity of the leucine zipper-containing bZIP motif on DNA binding: prediction and rational design. [My Copy] Genes & development, Vol. 7, No. 6. (June 1993), pp. 1047-1058. by C. R. Vinson, T. Hai, S. M. Boyd posted to bzip coiled-coils rational-model residue-preferences predictions by kgutwin on 2009-04-23 20:36:58 as
	alpha-Helical coiled coils and bundles: How to design an alpha-helical protein [My Copy] Proteins: Structure, Function, and Genetics, Vol. 7, No. 1. (1990), pp. 1-15. by Carolyn Cohen, David A. D. Parry posted to coiled-coils design structure by kgutwin on 2009-04-23 20:25:02 as
	Structural features in the heptad substructure and longer range repeats of two-stranded alpha-fibrous proteins. [My Copy] International journal of biological macromolecules, Vol. 12, No. 5. (October 1990), pp. 328-334. by J. F. Conway, D. A. Parry posted to coiled-coils residue-preferences review by kgutwin on 2009-04-23 20:05:56 as
	Crystal structure and molecular interactions of tropomyosin. [My Copy] Nature, Vol. 278, No. 5703. (29 March 1979), pp. 413-417. by G. N. Phillips, E. E. Lattman, P. Cummins, K. Y. Lee, C. Cohen posted to coiled-coils historical structure tropomyosin by kgutwin on 2009-04-23 19:59:08 as along with 1 person Haggan
	Structure of the ColE1 Rop protein at 1.7 p resolution1 [My Copy] Journal of Molecular Biology*, Vol. 196, No. 3. (August 1987), pp. 657-675. by D. Banner posted to coiled-coils historical rop structure by kgutwin on 2009-04-23 03:29:04 as
	A second class of synthetase structure revealed by X-ray analysis of Escherichia coli seryl-tRNA synthetase at 2.5 A. [My Copy] Nature, Vol. 347, No. 6290. (20 September 1990), pp. 249-255. by S. Cusack, C. Berthet-Colominas, M. Härtlein, N. Nassar, R. Leberman posted to coiled-coils ser-rs structure by kgutwin on 2009-04-23 03:21:30 as along with 1 person caldavis
	Classification of human B-ZIP proteins based on dimerization properties. [My Copy] Mol Cell Biol, Vol. 22, No. 18. (September 2002), pp. 6321-6335. by C. Vinson, M. Myakishev, A. Acharya, A. A. Mir, J. R. Moll, M. Bonovich posted to bzip coiled-coils coupling-energy families by kgutwin on 2009-04-23 02:23:39 as along with 3 people hplatero cjeans gwenknight
	A thermodynamic scale for leucine zipper stability and dimerization specificity: e and g interhelical interactions. [My Copy] The EMBO journal, Vol. 13, No. 12. (15 June 1994), pp. 2849-2861. by D. Krylov, I. Mikhailenko, C. Vinson posted to bzip coiled-coils coupling-energy residue-preferences by kgutwin on 2009-04-23 02:02:48 as
	Inter-helical interactions in the leucine zipper coiled coil dimer: pH and salt dependence of coupling energy between charged amino acids. [My Copy] J Mol Biol, Vol. 279, No. 4. (19 June 1998), pp. 959-972. by D. Krylov, J. Barchi, C. Vinson posted to bzip coiled-coils coupling-energy residue-preferences by kgutwin on 2009-04-23 02:01:57 as along with 2 people kevinchannon ca3295
	A heterodimerizing leucine zipper coiled coil system for examining the specificity of a position interactions: amino acids I, V, L, N, A, and K. [My Copy] Biochemistry, Vol. 41, No. 48. (3 December 2002), pp. 14122-14131. by A. Acharya, S. B. Ruvinov, J. Gal, J. R. Moll, C. Vinson posted to bzip coiled-coils coupling-energy residue-preferences by kgutwin on 2009-04-23 02:00:21 as along with 1 person hplatero
	Stability of 100 homo and heterotypic coiled-coil a-a' pairs for ten amino acids (A, L, I, V, N, K, S, T, E, and R). [My Copy] Biochemistry, Vol. 45, No. 38. (26 September 2006), pp. 11324-11332. by A. Acharya, V. Rishi, C. Vinson posted to bzip coiled-coils coupling-energy residue-preferences by kgutwin on 2009-04-23 01:59:36 as along with 6 people gwenknight chgjb kevinchannon bethbromley ca3295 hmk
	Leucine repeats and an adjacent DNA binding domain mediate the formation of functional cFos-cJun heterodimers. [My Copy] Science (New York, N.Y.), Vol. 243, No. 4899. (31 March 1989), pp. 1689-1694. by R. Turner, R. Tjian posted to bzip coiled-coils historical by kgutwin on 2009-04-23 01:33:10 as
	Homology between the DNA-Binding Domain of the GCN4 Regulatory Protein of Yeast and the Carboxyl-Terminal Region of a Protein Coded for by the Oncogene jun [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 84, No. 10. (1987), pp. 3316-3319. by Peter K. Vogt, Timothy J. Bos, Russell F. Doolittle posted to bzip coiled-coils by kgutwin on 2009-04-23 01:18:16 as

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coiled-coils	138
predictions	75
post-defense	70
structure	64
bzip	41
statpot	37
review	33
trimer	33
interactions	30
historical	27
antiparallel	23
newfams-evidence	21
design	20
tropomyosin	17
residue-preferences	17
keating-import	16
dimer	16
litreview2008	16
oakley-import	15
database	13
analysis	13
trigger-sequence	12
domains	12
need-pdf	11
potential	11
secondary-structure	10
expt-evidence	10
helix-packing	9
specificity	9
litreview2009	9
crick-param	8
ori-dep-potential	8
multicoil	8
paircoil	8
rosetta	8
coupling-energy	8
docking	8
modeling	7
myosin	7
electrostatics	7
dfire	7
alignment	7
threading	6
socket	6
nemo	6
kinase	6
folding	6
snare	6
keratin	6
reference-state	6
svm	5
newcoils	5
ab-initio	5
genome	5
families	5
zincfinger	4
ism	4
chou-fasman	4
homodimer	4
collagen	4
interfaces	4
scaffold	3
tpr	3
molecular-mechanics	3
laminin	3
cluster-expansion	3
sh3	3
tenascin	3
reduced	3
miyazawa-jernigan	3
fiber-diffraction	3
multiprospector	3
contact	3
sequence	3
homologs	3
sindbis-virus	3
tetramer	3
marcoil	3
profiles	3
hemagglutinin	3
learncoil	3
right-handed	3
correlations	3
pdz	3
heterodimer	3
gor	2
spc110p	2
hmm	2
hsfbp1	2
electron-microscopy	2
multiprot	2
chemistry	2
single-alpha-helix	2
mlp	2
blast	2
campbd	2
kinetics	2
opus	2
charmm	2
fibrinogen	2
short	2
tasser	2
interprets	2
theoretical	2
astrin	2
npc	2
rational-model	2
motions	2
spb	2
lattice-model	2
spectrin	2
sh2	2
knobs-into-holes	2
casp	2
dope	2
numa	2
prediction	2
spot-array	1
model-forms	1
information-theory	1
ser-rs	1
calmodulin	1
fer	1
atpase	1
divergence	1
clustering	1
homology-model	1
uniref	1
yeast-2-hybrid	1
vbp	1
l1orf1	1
hsf	1
lattice	1
smc	1
classy	1
clashes	1
orientation	1
p-het	1
clpb	1
psipred	1
substitution-matrix	1
amber	1
chromophore	1
fusion	1
residue-composition	1
pqs	1
ramachandran	1
cortexillin	1
gp41	1
fractal	1
snv_n	1
systers	1
hairpin	1
tsp1	1
hydrogen-bond	1
foldx	1
esm	1
complex	1
eef1	1
structure-aln	1
hpc	1
solvent	1
brca1	1
arabidopsis	1
dynein	1
matrilin	1
genbank	1
intramolecular	1
dna	1
binding	1
predicted-cc	1
microarray	1
functions	1
rop	1
biojava	1
heptad-shift	1
minimization	1
ultra-high-xtal	1
all-atom	1
ef-hand	1
scop	1
rna	1

kgutwin's coiled-coils [138 articles] Export

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