kieran101's library 437 articles Export

	Detection of an Infectious Retrovirus, XMRV, in Blood Cells of Patients with Chronic Fatigue Syndrome [My Copy] Science, Vol. 326, No. 5952. (23 October 2009), pp. 585-589. by Vincent C. Lombardi, Francis W. Ruscetti, Jaydip Das Gupta, et al.Max A. Pfost, Kathryn S. Hagen, Daniel L. Peterson, Sandra K. Ruscetti, Rachel K. Bagni, Cari Petrow-Sadowski, Bert Gold, Michael Dean, Robert H. Silverman, Judy A. Mikovits posted to xmrv by kieran101 on 2009-10-09 13:13:58 as along with 6 people and 1 group wsjames cobi richardfranzese memerman samueleuk cwtjoa Oxford Virology
	Highly Purified Human Immunodeficiency Virus Type 1 Reveals a Virtual Absence of Vif in Virions [My Copy] J. Virol., Vol. 73, No. 2. (1 February 1999), pp. 1460-1467. by Markus Dettenhofer, Xiao-Fang Yu posted to techniques by kieran101 on 2009-09-16 17:21:54 as
	Structure and real-time monitoring of the enzymatic reaction of APOBEC3G which is involved in anti-HIV activity. [My Copy] Nucleic acids symposium series (2004), No. 53. (2009), pp. 87-88. by Ayako Furukawa, Takashi Nagata, Akimasa Matsugami, et al.Yuichirou Habu, Ryuichi Sugiyama, Fumiaki Hayashi, Naohiro Kobayashi, Shigeyuki Yokoyama, Hiroshi Takaku, Masato Katahira posted to structure apobec by kieran101 on 2009-09-15 17:43:41 as
	Evolutionary Trajectories of Primate Genes Involved in HIV Pathogenesis [My Copy] Mol Biol Evol, Vol. 26, No. 12. (1 December 2009), pp. 2865-2875. by Millan Ortiz, Nicolas Guex, Etienne Patin, et al.Olivier Martin, Ioannis Xenarios, Angela Ciuffi, Lluis Quintana-Murci, Amalio Telenti posted to computation by kieran101 on 2009-09-15 17:42:55 as along with 2 people djkt memerman
	Kinetics of Association and Dissociation of HIV-1 Reverse Transcriptase Subunits [My Copy] Biochemistry, Vol. 0, No. 0. (0000) by Carl F. Venezia, Brendan J. Meany, Valerie A. Braz, Mary D. Barkley posted to rt by kieran101 on 2009-09-01 18:41:58 as
	Essential Role of Cyclophilin A for Hepatitis C Virus Replication and Virus Production and Possible Link to Polyprotein Cleavage Kinetics [My Copy] PLoS Pathog, Vol. 5, No. 8. (14 August 2009), e1000546. by Artur Kaul, Sarah Stauffer, Carola Berger, et al.Thomas Pertel, Jennifer Schmitt, Stephanie Kallis, Margarita Zayas Lopez, Volker Lohmann, Jeremy Luban, Ralf Bartenschlager posted to cyclophilins by kieran101 on 2009-08-20 15:38:15 as along with 1 person memerman
	Mechanism of HIV-1 Tat RNA translation and its activation by the Tat protein [My Copy] Retrovirology, Vol. 6, No. 1. (11 August 2009), 74. by Nicolas Charnay, Roland I. Nagy, Ricardo S. Rifo, Theophile Ohlmann, Marcelo L. Lastra, Jean L. Darlix posted to tat by kieran101 on 2009-08-20 15:36:09 as
	pH-Sensitive Binding of Cytochrome c to the Inner Mitochondrial Membrane. Implications for the Participation of the Protein in Cell Respiration and Apoptosis [My Copy] Biochemistry, Vol. 0, No. 0. (0000) by Cintia Kawai, Felipe S. Pessoto, Tiago Rodrigues, et al.Katia C. U. Mugnol, Veronica Tórtora, Laura Castro, Vitor A. Milícchio, Ivarne L. S. Tersariol, Paolo Di Mascio, Rafael Radi, Ana M. Carmona-Ribeiro, Iseli L. Nantes posted to apoptosis by kieran101 on 2009-08-18 16:15:27 as along with 1 person paulschlesinger
	APOBEC3G-depleted resting CD4+ T cells remain refractory to HIV1 infection. [My Copy] PloS one, Vol. 4, No. 8. (2009) by Francesca R. Santoni de Sio, Didier Trono posted to infection apobec by kieran101 on 2009-08-17 16:21:17 as
	Plasmacytoid Dendritic Cells: Linking Innate and Adaptive Immunity [My Copy] J. Virol., Vol. 79, No. 1. (1 January 2005), pp. 17-27. by Kelli Mckenna, Anne-Sophie Beignon, Nina Bhardwaj posted to review immunology by kieran101 on 2009-08-12 15:39:07 as
	Modeling sequence evolution in acute HIV-1 infection [My Copy] Journal of Theoretical Biology, Vol. 261, No. 2. (21 November 2009), pp. 341-360. by Ha Y. Lee, Elena E. Giorgi, Brandon F. Keele, et al.Brian Gaschen, Gayathri S. Athreya, Jesus F. Salazar-Gonzalez, Kimmy T. Pham, Paul A. Goepfert, J. Michael Kilby, Michael S. Saag posted to modelling by kieran101 on 2009-08-12 15:27:25 as along with 3 people venuiitg carlosjavierna nfparrish
	Target Cell Type-Dependent Modulation of Human Immunodeficiency Virus Type 1 Capsid Disassembly by Cyclophilin A [My Copy] J. Virol., Vol. 83, No. 21. (1 November 2009), pp. 10951-10962. by Yuan Li, Alak K. Kar, Joseph Sodroski posted to cyclophilins by kieran101 on 2009-08-09 01:00:22 as along with 2 people and 1 group memerman wsjames Oxford Virology
	CEM-T4 Cells Do Not Lack an APOBEC3G Cofactor [My Copy] PLoS Pathog, Vol. 5, No. 7. (31 July 2009), e1000528. by Guylaine Haché, Reuben S. Harris posted to apobec by kieran101 on 2009-07-31 11:24:58 as
	Interactions of Processed Nef (58-206) with Virion Proteins of HIV Type 1 [My Copy] AIDS Research and Human Retroviruses, Vol. 20, No. 4. (April 2004), pp. 399-407. by Angela Ciuffi, Miguel Munoz, Gabriela Bleiber, et al.Manuel Favre, Francoise Stutz, Amalio Telenti, Pascal R. A. Meylan posted to rt techniques by kieran101 on 2009-07-29 15:32:51 as
	SnapShot: BCL-2 Proteins [My Copy] Cell, Vol. 138, No. 2. (23 July 2009), pp. 404.e1-404.e2. by J. Marie Hardwick, Richard J. Youle posted to apoptosis by kieran101 on 2009-07-29 13:39:45 as
	Structure of unliganded HIV-1 reverse transcriptase at 2.7 å resolution: implications of conformational changes for polymerization and inhibition mechanisms [My Copy] Structure, Vol. 4, No. 7. (July 1996), pp. 853-860. by Y. Hsiou, J. Ding, K. Das, A. Clarkjr, S. Hughes, E. Arnold posted to structure by kieran101 on 2009-07-22 19:08:00 as
	Impact of cytotoxic-T-lymphocyte memory induction without virus-specific CD4+ T-cell help on control of a simian immunodeficiency virus challenge in rhesus macaques. [My Copy] Journal of virology (8 July 2009) by Tetsuo Tsukamoto, Akiko Takeda, Takuya Yamamoto, Hiroyuki Yamamoto, Miki Kawada, Tetsuro Matano posted to immunology by kieran101 on 2009-07-15 13:08:02 as
	Dynamic Host Energetics and Cytoskeletal Proteomes in HIV-1-Infected Human Primary CD4 Cells: Analysis by Multiplexed Label-free Mass Spectrometry. [My Copy] Journal of virology (8 July 2009) by Eric Y. Chan, Jennifer N. Sutton, Jon M. Jacobs, Andrey Bondarenko, Richard D. Smith, Michael G. Katze posted to infection by kieran101 on 2009-07-15 13:07:32 as
	Defining APOBEC3 Expression Patterns in Human Tissues and Hematopoietic Cell Subsets [My Copy] J. Virol., Vol. 83, No. 18. (15 September 2009), pp. 9474-9485. by Fransje A. Koning, Edmund N. C. Newman, Eun-Young Kim, Kevin J. Kunstman, Steven M. Wolinsky, Michael H. Malim posted to apobec by kieran101 on 2009-07-15 13:07:05 as along with 1 person memerman
	Balancing reversion of CTL and neutralizing antibody escape mutations within HIV-1 Env upon transmission. [My Copy] Journal of virology (10 June 2009) by Viv Peut, Shahan Campbell, Adriana Gaeguta, et al.Rob J. Center, Kim Wilson, Sheilajen Alcantara, Caroline S. Fernandez, Damian F. Purcell, Stephen J. Kent posted to computation ctl by kieran101 on 2009-07-02 13:08:38 as
	Ten Simple Rules for Choosing between Industry and Academia [My Copy] PLoS Comput Biol, Vol. 5, No. 6. (26 June 2009), e1000388. by David B. Searls posted to techniques by kieran101 on 2009-07-01 09:27:11 as along with 36 people and 3 groups welliegirl Sergey_gerbek cyounkin Tomste Horduna aaltenburger Zephyrus CulCog thegoose Yanno timflutre tnhh PeteField MarcoAlvarez sobolevnrm Stew dbikard jasontsai casutton franklu310 chrisamiller rdiaz daveGerrard reyez neils marekrud Borelli psique kshameer gjuggler sdaehne flips ppgardne fgibson barry dullhunk Bioinformatics - CRUK Journal picks McCammon
	Cytoplasmic APOBEC3G Restricts Incoming Vif-positive HIV-1 and Increases 2-LTR Circle Formation In Activated T Helper Subtype Cells. [My Copy] Journal of virology (17 June 2009) by Michael L. Vetter, Richard T. D'Aquila posted to apobec by kieran101 on 2009-06-30 17:48:13 as
	Measurement of HIV-1 preintegration transcription using the Rev-dependent Rev-CEM cell reveals a sizable transcribing DNA population comparable with proviral templates. [My Copy] Journal of virology (24 June 2009) by Subashini R. Iyer, Dongyang Yu, Angélique Biancotto, Leonid B. Margolis, Yuntao Wu posted to techniques by kieran101 on 2009-06-30 17:44:57 as
	HIV-1 escapes from IL-2-producing CD4+ T cell responses without high-frequency fixation of mutations. [My Copy] Journal of virology (24 June 2009) by R. Brad Jones, Feng-Yun Y. Yue, Xiao Xiao Jenny X. Gu, et al.Diana V. Hunter, Shariq Mujib, Gabor Gyenes, Ruqaya Mohamed, Kelly S. Macdonald, Colin Kovacs, Mario A. Ostrowski posted to immunology by kieran101 on 2009-06-30 16:15:48 as
	Rapid and Accurate Large-Scale Coestimation of Sequence Alignments and Phylogenetic Trees [My Copy] Science, Vol. 324, No. 5934. (19 June 2009), pp. 1561-1564. by Kevin Liu, Sindhu Raghavan, Serita Nelesen, C. Randal Linder, Tandy Warnow posted to computation techniques by kieran101 on 2009-06-30 15:58:22 as along with 26 people and 4 groups gjuggler parnell kinestetika robertrentzsch xianjun gdb jbhiatt stajich operon biomcgary zwang michaelbarton vingron tatman303 hryk lizbiogen pkonings ppgardne dokky aprasad timflutre inquil TRHvidsten djkt fenghezi phoenixzxl Orengo Group Journal Picks Mycology Journal picks iSEEM
	CD44 MicroBeads accelerate HIV-1 infection in T cells [My Copy] Virology, Vol. 388, No. 2. (05 June 2009), pp. 294-304. by Valeri H. Terry, Ian C. Johnston, Celsa A. Spina posted to techniques by kieran101 on 2009-06-30 15:25:39 as
	Genetic identity, biological phenotype, and evolutionary pathways of transmitted/founder viruses in acute and early HIV-1 infection. [My Copy] The Journal of experimental medicine, Vol. 206, No. 6. (8 June 2009), pp. 1273-1289. by J. F. Salazar-Gonzalez, M. G. Salazar, B. F. Keele, et al.G. H. Learn, E. E. Giorgi, H. Li, J. M. Decker, S. Wang, J. Baalwa, M. H. Kraus, N. F. Parrish, K. S. Shaw, M. B. Guffey, K. J. Bar, K. L. Davis, C. Ochsenbauer-Jambor, J. C. Kappes, M. S. Saag, M. S. Cohen, J. Mulenga, C. A. Derdeyn, S. Allen, E. Hunter, M. Markowitz, P. Hraber, A. S. Perelson, T. Bhattacharya, B. F. Haynes, B. T. Korber, B. H. Hahn, G. M. Shaw posted to computation infection by kieran101 on 2009-06-29 11:03:53 as along with 1 person nparrish
	The first T cell response to transmitted/founder virus contributes to the control of acute viremia in HIV-1 infection. [My Copy] The Journal of experimental medicine, Vol. 206, No. 6. (8 June 2009), pp. 1253-1272. by Nilu Goonetilleke, Michael K. Liu, Jesus F. Salazar-Gonzalez, et al.Guido Ferrari, Elena Giorgi, Vitaly V. Ganusov, Brandon F. Keele, Gerald H. Learn, Emma L. Turnbull, Maria G. Salazar, Kent J. Weinhold, Stephen Moore, CHAVI Clinical Core B, Norman Letvin, Barton F. Haynes, Myron S. Cohen, Peter Hraber, Tanmoy Bhattacharya, Persephone Borrow, Alan S. Perelson, Beatrice H. Hahn, George M. Shaw, Bette T. Korber, Andrew J. McMichael posted to computation by kieran101 on 2009-06-29 10:48:39 as along with 4 people rpsimmonsin nfparrish peterbgilbert nparrish
	Tumultuous relationship between the human immunodeficiency virus type 1 viral infectivity factor (Vif) and the human APOBEC-3G and APOBEC-3F restriction factors. [My Copy] Microbiology and molecular biology reviews : MMBR, Vol. 73, No. 2. (June 2009), pp. 211-232. by S. Henriet, G. Mercenne, S. Bernacchi, J. C. Paillart, R. Marquet posted to apobec vif by kieran101 on 2009-06-10 11:31:12 as
	Characterization of the Behavior of Functional Viral Genomes during the Early Steps of Human Immunodeficiency Virus Type 1 Infection [My Copy] J. Virol., Vol. 83, No. 15. (1 August 2009), pp. 7524-7535. by Vanessa Arfi, Julia Lienard, Xuan-Nhi Nguyen, et al.Gregory Berger, Dominique Rigal, Jean-Luc Darlix, Andrea Cimarelli posted to integrase rt techniques by kieran101 on 2009-06-10 10:31:58 as along with 2 people and 1 group memerman wsjames Oxford Virology
	ROLES OF GAG AND NCp7 IN FACILITATING tRNALys3 ANNEALING TO VIRAL RNA IN HIV-1. [My Copy] Journal of virology (3 June 2009) by Fei Guo, Jenan Saadatmand, Meijuan Niu, Lawrence Kleiman posted to apobec gag rna trna by kieran101 on 2009-06-10 10:25:35 as
	Intracellular interactions between APOBEC3G, RNA, and HIV-1 Gag: APOBEC3G multimerization is dependent on its association with RNA [My Copy] Retrovirology, Vol. 6 (04 June 2009), 56. by Yeshitila Friew, Vitaly Boyko, Wei-Shau Hu, Vinay Pathak posted to apobec gag rna techniques by kieran101 on 2009-06-10 10:24:35 as
	HIV Evolution in Early Infection: Selection Pressures, Patterns of Insertion and Deletion, and the Impact of APOBEC [My Copy] PLoS Pathog, Vol. 5, No. 5. (8 May 2009), e1000414. by Natasha Wood, Tanmoy Bhattacharya, Brandon F. Keele, et al.Elena Giorgi, Michael Liu, Brian Gaschen, Marcus Daniels, Guido Ferrari, Barton F. Haynes, Andrew Mcmichael, George M. Shaw, Beatrice H. Hahn, Bette Korber, Cathal Seoighe posted to apobec computation evolution by kieran101 on 2009-05-08 10:52:50 as along with 1 person and 1 group wsjames Oxford Virology
	APOBEC3G is a single-stranded DNA cytidine deaminase and functions independently of HIV reverse transcriptase [My Copy] Nucl. Acids Res., Vol. 32, No. 8. (30 April 2004), pp. 2421-2429. by Rodolphe Suspene, Peter Sommer, Michel Henry, et al.Stephane Ferris, Denise Guetard, Sylvie Pochet, Ann Chester, Naveenan Navaratnam, Simon Wain-Hobson, Jean-Pierre Vartanian posted to apobec rt by kieran101 on 2009-05-08 10:33:27 as
	T cell stimulation and expansion using anti-CD3/CD28 beads [My Copy] Journal of Immunological Methods, Vol. 275, No. 1-2. (01 April 2003), pp. 251-255. by A. Trickett posted to techniques by kieran101 on 2009-05-08 10:05:26 as
	HIV Enters Cells via Endocytosis and Dynamin-Dependent Fusion with Endosomes [My Copy] Vol. 137, No. 3. (1 May 2009), pp. 433-444. by Kosuke Miyauchi, Yuri Kim, Olga Latinovic, Vladimir Morozov, Gregory B. Melikyan posted to entry by kieran101 on 2009-05-06 14:45:50 as along with 3 people memerman pedromts jbhiatt
	Human Immunodeficiency Virus Type 1 Fitness Is a Determining Factor in Viral Rebound and Set Point in Chronic Infection [My Copy] J. Virol., Vol. 77, No. 24. (15 December 2003), pp. 13146-13155. by Alexandra Trkola, Herbert Kuster, Christine Leemann, et al.Claudia Ruprecht, Beda Joos, Amalio Telenti, Bernhard Hirschel, Rainer Weber, Sebastian Bonhoeffer, Huldrych F. Gunthard posted to techniques by kieran101 on 2009-04-27 18:06:24 as
	An Extended Structure of the APOBEC3G Catalytic Domain Suggests a Unique Holoenzyme Model. [My Copy] Journal of molecular biology (20 April 2009) by Elena Harjes, Phillip J J. Gross, Kuan-Ming M. Chen, et al.Yongjian Lu, Keisuke Shindo, Roni Nowarski, John D D. Gross, Moshe Kotler, Reuben S S. Harris, Hiroshi Matsuo posted to apobec structure by kieran101 on 2009-04-27 15:18:44 as
	Are Viruses Inhibited by APOBEC3 Molecules from Their Host Species? [My Copy] PLoS Pathog, Vol. 5, No. 4. (24 April 2009), e1000347. by Susan R. Ross posted to apobec infection review by kieran101 on 2009-04-24 11:06:22 as along with 1 person iayork
	Cooperative and specific binding of Vif to the 5' region of HIV-1 genomic RNA. [My Copy] Journal of molecular biology, Vol. 354, No. 1. (18 November 2005), pp. 55-72. by S. Henriet, D. Richer, S. Bernacchi, et al.E. Decroly, R. Vigne, B. Ehresmann, C. Ehresmann, J. C. Paillart, R. Marquet posted to apobec rna vif by kieran101 on 2009-04-23 14:13:09 as
	Accelerated Adaptive Evolution on a Newly Formed X Chromosome [My Copy] PLoS Biology, Vol. 7, No. 4. (1 April 2009), e82. by Doris Bachtrog, Jeffrey D. Jensen, Zhi Zhang posted to computation by kieran101 on 2009-04-21 12:10:59 as along with 3 people and 2 groups polivares stajich djkt BergmanLab Mycology
	Advances in RNA Structure Prediction from Sequence: New Tools for Generating Hypotheses about Viral RNA Structure-Function Relationships [My Copy] J. Virol., Vol. 83, No. 13. (1 July 2009), pp. 6326-6334. by Susan J. Schroeder posted to computation techniques by kieran101 on 2009-04-21 11:28:05 as along with 3 people onufriev samgj carlosjavierna
	Mutational analysis of the HIV-1 auxiliary protein Vif identifies independent domains important for the physical and functional interaction with HIV-1 reverse transcriptase [My Copy] Nucl. Acids Res. (15 April 2009), gkp226. by Alexandra Kataropoulou, Chiara Bovolenta, Amalia Belfiore, et al.Sonia Trabatti, Anna Garbelli, Simona Porcellini, Rossella Lupo, Giovanni Maga posted to rt vif by kieran101 on 2009-04-20 17:06:02 as
	A novel HIV-1 restriction factor that is biologically distinct from APOBEC3 cytidine deaminases in a human T cell line CEM.NKR [My Copy] Retrovirology, Vol. 6 (03 April 2009), 31. by Tao, Yong-Hui Zheng posted to infection by kieran101 on 2009-04-20 17:02:05 as
	Real-time quantitative PCR for the design of lentiviral vector analytical assays. [My Copy] Gene therapy, Vol. 12 Suppl 1 (October 2005) by C. Delenda, C. Gaillard posted to techniques by kieran101 on 2009-04-20 16:47:05 as
	Structural basis for HIV-1 DNA integration in the human genome, role of the LEDGF/P75 cofactor [My Copy] (19 February 2009) by Fabrice Michel, Corinne Crucifix, Florence Granger, et al.Sylvia Eiler, Jean-François Mouscadet, Sergei Korolev, Julia Agapkina, Rustam Ziganshin, Marina Gottikh, Alexis Nazabal, Stéphane Emiliani, Richard Benarous, Dino Moras, Patrick Schultz, Marc Ruff posted to integrase by kieran101 on 2009-04-20 13:26:42 as
	Isolation of a cellular factor that can reactivate latent HIV-1 without T cell activation. [My Copy] Proceedings of the National Academy of Sciences of the United States of America (31 March 2009) by Hung-Chih C. Yang, Lin Shen, Robert F F. Siliciano, Joel L L. Pomerantz posted to infection latency by kieran101 on 2009-04-02 15:18:31 as along with 2 people and 1 group memerman wsjames Oxford Virology
	Network Features of the Mammalian Circadian Clock [My Copy] PLoS Biol, Vol. 7, No. 3. (10 March 2009), e1000052. by Julie E. Baggs, Tom S. Price, Luciano Ditacchio, Satchidananda Panda, Garret A. Fitzgerald, John B. Hogenesch posted to computation by kieran101 on 2009-04-01 13:44:04 as along with 4 people newgene carlk sherdim biomcgary
	The SET Complex Acts as a Barrier to Autointegration of HIV-1 [My Copy] PLoS Pathog, Vol. 5, No. 3. (6 March 2009), e1000327. by Nan Yan, Peter Cherepanov, Janet E. Daigle, Alan Engelman, Judy Lieberman posted to integrase by kieran101 on 2009-04-01 13:33:18 as along with 1 person and 1 group wsjames Oxford Virology
	RNA-Dependent Oligomerization of APOBEC3G Is Required for Restriction of HIV-1 [My Copy] PLoS Pathog, Vol. 5, No. 3. (6 March 2009), e1000330. by Hendrik Huthoff, Flavia Autore, Sarah Gallois-Montbrun, Franca Fraternali, Michael H. Malim posted to apobec rna by kieran101 on 2009-04-01 13:33:03 as along with 2 people and 1 group ffranca wsjames Oxford Virology

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apobec	131
techniques	66
vif	56
autophagy	52
review	35
rna	26
structure	23
assembly	22
ubiquitin	21
computation	20
modelling	17
immunology	16
rt	16
cyclophilins	13
phylogenetics	12
trim	11
gag	10
infection	10
treatment	9
a3h	8
integrase	7
sequencing	7
vpr	7
apoptosis	5
nef	5
tat	5
lipids	3
protease	3
resistance	3
retrotransposons	3
sirna	3
stress_granules	3
vpu	3
antibodies	2
budding	2
chaperones	2
env	2
latency	2
mirna	2
nc	2
splicing	2
tar	2
vpx	2
aid	1
ctl	1
entry	1
evolution	1
genomics	1
hepatitis	1
host	1
initiation	1
interferon	1
line	1
nk_cells	1
packaging	1
primer	1
rnai	1
rnaseh	1
sr_proteins	1
translation	1
trna	1
xmrv	1

kieran101's library 437 articles Export

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