kinestetika's methods [36 articles] Export

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	Reactome Array: Forging a Link Between Metabolome and Genome [My Copy] Science, Vol. 326, No. 5950. (9 October 2009), pp. 252-257. by A. Beloqui, M. E. Guazzaroni, F. Pazos, et al.J. M. Vieites, M. Godoy, O. V. Golyshina, T. N. Chernikova, A. Waliczek, R. Silva-Rocha, Y. Al-ramahi, V. La Cono, C. Mendez, J. A. Salas, R. Solano, M. M. Yakimov, K. N. Timmis, P. N. Golyshin, M. Ferrer posted to methods metabolome by kinestetika on 2009-10-13 15:59:17 as along with 9 people and 1 group ajsferreira renatomilani leliavski michaelbarton brianb abhishek_tiwari TRHvidsten ptrobajo gbloeb Shared Literature Resource of the Microbial Fitness Group - MPI Bremen
	Accurate determination of microbial diversity from 454 pyrosequencing data. [My Copy] Nature methods, Vol. 6, No. 9. (09 September 2009), pp. 639-641. by Christopher Quince, Anders Lanzén, Thomas P. Curtis, et al.Russell J. Davenport, Neil Hall, Ian M. Head, L. Fiona Read, William T. Sloan posted to methods metagenomics by kinestetika on 2009-10-01 10:56:35 as along with 7 people and 2 groups halinat jgill jonilaserson skembel druvus orzenil danmaclean iSEEM Bioinformatics
	Direct RNA sequencing. [My Copy] Nature, Vol. 461, No. 7265. (8 October 2009), pp. 814-818. by Fatih Ozsolak, Adam R. Platt, Dan R. Jones, et al.Jeffrey G. Reifenberger, Lauryn E. Sass, Peter McInerney, John F. Thompson, Jayson Bowers, Mirna Jarosz, Patrice M. Milos posted to transcriptomics sequencing_technologies methods by kinestetika on 2009-09-24 09:39:02 as along with 20 people and 2 groups pmalkus hzoltan manduca gotgenes jwfoley GeeSharpMinor mlc39 colinveal reyez TRHvidsten djkt ppgardne dchughes heliopais vingron nzm n00c lp2 toni_marco dswan Journal picks Bioinformatics - CRUK
	Whole Genome Amplification and De novo Assembly of Single Bacterial Cells [My Copy] PLoS ONE, Vol. 4, No. 9. (2 September 2009), e6864. by Sébastien Rodrigue, Rex R. Malmstrom, Aaron M. Berlin, Bruce W. Birren, Matthew R. Henn, Sallie W. Chisholm posted to single_cell_genomics phototrophy methods marine by kinestetika on 2009-09-08 10:13:15 as along with 2 people and 2 groups vaulot chrisvanlang Papers recommended by the Roscoff Plankton Group Microbial-Ecology
	Single-molecule sequencing of an individual human genome [My Copy] Nature Biotechnology, Vol. 27, No. 9. (10 August 2009), pp. 847-850. by Dmitry Pushkarev, Norma F. Neff, Stephen R. Quake posted to methods metagenomics genome by kinestetika on 2009-08-17 10:17:20 as along with 25 people and 3 groups JamesBarger n00c ethanmj MurphysLab leliavski inesdesantiago fenghezi megraw kintoki neils daforerog gangcai mqbphcw3 jmanning2k jonilaserson druvus alexknight qayub natstreet mtagaya guhjy installe psique SeaBird danmaclean Journal picks Shared Literature Resource of the Microbial Fitness Group - MPI Bremen Bioinformatics
	Application of 'next-generation' sequencing technologies to microbial genetics [My Copy] Nat Rev Micro, Vol. advanced online publication, No. 4. (23 February 2009), pp. 287-296. by Daniel MacLean, Jonathan D. G. Jones, David J. Studholme posted to review methods metagenomics genome by kinestetika on 2009-08-11 20:37:05 as along with 9 people and 1 group nfparrish n00c katholt jlgreen roys robsyme hpaces druvus jmeppley iSEEM
	Real-Time DNA Sequencing from Single Polymerase Molecules [My Copy] Science, Vol. 323, No. 5910. (2 January 2009), pp. 133-138. by John Eid, Adrian Fehr, Jeremy Gray, et al.Khai Luong, John Lyle, Geoff Otto, Paul Peluso, David Rank, Primo Baybayan, Brad Bettman, Arkadiusz Bibillo, Keith Bjornson, Bidhan Chaudhuri, Frederick Christians, Ronald Cicero, Sonya Clark, Ravindra Dalal, Alex deWinter, John Dixon, Mathieu Foquet, Alfred Gaertner, Paul Hardenbol, Cheryl Heiner, Kevin Hester, David Holden, Gregory Kearns, Xiangxu Kong, Ronald Kuse, Yves Lacroix, Steven Lin, Paul Lundquist, Congcong Ma, Patrick Marks, Mark Maxham, Devon Murphy, Insil Park, Thang Pham, Michael Phillips, Joy Roy, Robert Sebra, Gene Shen, Jon Sorenson, Austin Tomaney, Kevin Travers, Mark Trulson, John Vieceli, Jeffrey Wegener, Dawn Wu, Alicia Yang, Denis Zaccarin, Peter Zhao, Frank Zhong, Jonas Korlach, Stephen Turner posted to genome metagenomics methods by kinestetika on 2009-08-09 23:20:50 as along with 38 people and 3 groups hzoltan operon n00c mtagaya jlgreen dna idoerg absterga lukzky ImranRaoufMalik Archaeogenetics inesdesantiago 7ac5 wimufi cactus jasontsai mlangill melting polivares pkonings natstreet fhalbrit druvus felsani samjlord Stew ghattem nedwards myzhang pengchy jbhiatt GeeSharpMinor GustavoLacerda azazello sconlan alexknight emptyhb caseybrown iSEEM moernerlab Bioinformatics - CRUK
	Rapid and Accurate Large-Scale Coestimation of Sequence Alignments and Phylogenetic Trees [My Copy] Science, Vol. 324, No. 5934. (19 June 2009), pp. 1561-1564. by Kevin Liu, Sindhu Raghavan, Serita Nelesen, C. Randal Linder, Tandy Warnow posted to methods phylogeny by kinestetika on 2009-08-09 23:17:50 as along with 26 people and 4 groups gjuggler parnell robertrentzsch xianjun gdb jbhiatt stajich operon biomcgary kieran101 zwang michaelbarton vingron tatman303 hryk lizbiogen pkonings ppgardne dokky aprasad timflutre inquil TRHvidsten djkt fenghezi phoenixzxl Orengo Group Journal Picks Mycology Journal picks iSEEM
	Environmental detection of octahaem cytochrome c hydroxylamine/hydrazine oxidoreductase genes of aerobic and anaerobic ammonium-oxidizing bacteria. [My Copy] Environmental microbiology, Vol. 10, No. 11. (November 2008), pp. 3140-3149. by Markus C. Schmid, Alan B. Hooper, Martin G. Klotz, et al.Dagmar Woebken, Phyllis Lam, Marcel M. Kuypers, Andreas Pommerening-Roeser, Huub J. Op den Camp, Mike S. Jetten posted to anammox hao methods primer_probe_design by kinestetika on 2009-08-09 16:21:09 as along with 2 groups Shared Literature Resource of the Microbial Fitness Group - MPI Bremen anammox
	Optimization of three FISH procedures for in situ detection of anaerobic ammonium oxidizing bacteria in biological wastewater treatment. [My Copy] Journal of microbiological methods, Vol. 78, No. 2. (20 August 2009), pp. 119-126. by Marko Pavlekovic, Markus C. Schmid, Nadja Schmider-Poignee, et al.Stefan Spring, Martin Pilhofer, Tobias Gaul, Mark Fiandaca, Frank E. Löffler, Mike Jetten, K-H H. Schleifer, Natuschka M. Lee posted to anammox ecology methods by kinestetika on 2009-08-09 15:29:21 as along with 1 group anammox
	Increasing the coverage of a metapopulation consensus genome by iterative read mapping and assembly [My Copy] Bioinformatics, Vol. 25, No. 21. (1 November 2009), pp. 2878-2881. by Bas E. Dutilh, Martijn A. Huynen, Marc Strous posted to metagenomics methods by kinestetika on 2009-08-09 11:43:17 as along with 7 people and 1 group dakelley druvus ThomasDOtto jasontsai skembel sharpton jmeppley iSEEM
	Genome-Wide Analysis in Vivo of Translation with Nucleotide Resolution Using Ribosome Profiling [My Copy] Science, Vol. 324, No. 5924. (10 April 2009), pp. 218-223. by Nicholas T. Ingolia, Sina Ghaemmaghami, John R. S. Newman, Jonathan S. Weissman posted to methods transcriptomics translation by kinestetika on 2009-02-13 09:12:29 as along with 18 people and 3 groups hzoltan jwfoley yyfwuhan gbloeb guhjy dpollard fenghezi gangcai idonaldson coela fpattyn jbhiatt kshundyak absterga myzhang bertelsen VGreiff provero RockmanLab NYU Journal Review microbiology_nijmegen
	GeoChip: a comprehensive microarray for investigating biogeochemical, ecological and environmental processes. [My Copy] The ISME journal, Vol. 1, No. 1. (May 2007), pp. 67-77. by Z. He, T. J. Gentry, C. W. Schadt, et al.L. Wu, J. Liebich, S. C. Chong, Z. Huang, W. Wu, B. Gu, P. Jardine, C. Criddle, J. Zhou posted to dna_array ecology methods molecular by kinestetika on 2008-12-17 20:26:34 as along with 1 group microbiology_nijmegen
	A Bioinformatician's Guide to Metagenomics [My Copy] Microbiol. Mol. Biol. Rev., Vol. 72, No. 4. (1 December 2008), pp. 557-578. by Victor Kunin, Alex Copeland, Alla Lapidus, Konstantinos Mavromatis, Philip Hugenholtz posted to metagenomics methods by kinestetika on 2008-12-06 02:24:28 as along with 40 people and 8 groups ajsferreira CorinYeats sconlan jasontsai halinat hwright michaelbarton taylor73 esyoun bluto idoerg hpaces skembel inquil EKotlarska anphony stajich sharpton vrich vaulot adgrativol jakechen balicea dbk GustavoLacerda guhjy hessec fhalbrit Zephyrus anazhu dswan sjcockell Borelli druvus azazello jmeppley neils Katje allysonlister skato_toyaku Orengo Group Journal Picks Shared Literature Resource of the Microbial Fitness Group - MPI Bremen iSEEM Papers recommended by the Roscoff Plankton Group Microbial-Ecology Translational Bioinformatics Roswell Cancer Crosstalk microbiology_nijmegen
	The sequencing batch reactor as a powerful tool for the study of slowly growing anaerobic ammonium-oxidizing microorganisms [My Copy] Applied Microbiology and Biotechnology, Vol. 50, No. 5. (16 November 1998), pp. 589-596. by M. Strous, J. J. Heijnen, J. G. Kuenen, M. S. M. Jetten posted to anammox methods by kinestetika on 2008-11-27 20:08:36 as along with 2 groups microbiology_nijmegen anammox
	Toward Automatic Reconstruction of a Highly Resolved Tree of Life [My Copy] Science, Vol. 311, No. 5765. (3 March 2006), pp. 1283-1287. by Francesca D. Ciccarelli, Tobias Doerks, Christian von Mering, Christopher J. Creevey, Berend Snel, Peer Bork posted to evolution methods phylogeny by kinestetika on 2008-10-02 10:14:21 as along with 20 people and 6 groups pablocarb cmura adampah druvus fhsantanna dparks Retchless knaseanka dpollard tny dchughes nirfriedman cmm azazello wenhan maximilianh cmzmasek lonshy diamantis Ema microbiology_nijmegen EisenLab FAB-lab G4ID Genetics-of-Gambling MBLAB
	Development of PCR primer systems for amplification of nitrite reductase genes (nirK and nirS) to detect denitrifying bacteria in environmental samples. [My Copy] Applied and environmental microbiology, Vol. 64, No. 10. (October 1998), pp. 3769-3775. by G. Braker, A. Fesefeldt, K. P. Witzel posted to methods molecular nirk nirs primer_probe_design by kinestetika on 2008-09-28 10:25:49 as along with 1 group microbiology_nijmegen
	Oligonucleotide microarray for the study of functional gene diversity in the nitrogen cycle in the environment. [My Copy] Applied and environmental microbiology, Vol. 69, No. 2. (February 2003), pp. 1159-1171. by G. Taroncher-Oldenburg, E. M. Griner, C. A. Francis, B. B. Ward posted to dna_array methods molecular ncycle by kinestetika on 2008-09-28 10:20:20 as along with 1 group microbiology_nijmegen
	Real-time detection of actively metabolizing microbes by redox sensing as applied to methylotroph populations in Lake Washington [My Copy] ISME J, Vol. 2, No. 7. (27 March 2008), pp. 696-706. by Marina G. Kalyuzhnaya, Mary E. Lidstrom, Ludmila Chistoserdova posted to ecology methods methylotroph molecular by kinestetika on 2008-09-27 12:00:06 as along with 3 people and 1 group Katje ax Huub_odc microbiology_nijmegen
	Microarray-Based Characterization of Microbial Community Functional Structure and Heterogeneity in Marine Sediments from the Gulf of Mexico [My Copy] Appl. Environ. Microbiol., Vol. 74, No. 14. (15 July 2008), pp. 4516-4529. by Liyou Wu, Laurie Kellogg, Allan H. Devol, James M. Tiedje, Jizhong Zhou posted to methods molecular by kinestetika on 2008-09-27 10:44:03 as along with 1 group microbiology_nijmegen
	Proteogenomic approaches for the molecular characterization of natural microbial communities. [My Copy] OMICS, Vol. 9, No. 4. (2005), pp. 301-333. by J. F. Banfield, N. C. Verberkmoes, R. L. Hettich, M. P. Thelen posted to metagenomics methods proteomics review by kinestetika on 2008-09-08 11:21:19 as along with 3 people and 2 groups jmeppley nitiniitk mjetten anammox microbiology_nijmegen
	Isolation of small-subunit rRNA for stable isotopic characterization [My Copy] Environmental Microbiology, Vol. 4, No. 8. (2002), pp. 451-464. by Barbara J. Macgregor, Volker Brüchert, Swantje Fleischer, Rudolf Amann posted to isotope_label methods molecular by kinestetika on 2008-09-08 11:06:20 as along with 1 group microbiology_nijmegen
	Calorimetric bioprocess monitoring by small modifications to a standard bench-scale bioreactor. [My Copy] Journal of biotechnology, Vol. 130, No. 1. (31 May 2007), pp. 24-31. by T. Schubert, U. Breuer, H. Harms, T. Maskow posted to calorimetry methods by kinestetika on 2008-09-07 20:14:42 as along with 1 group microbiology_nijmegen
	Multiple archaeal groups mediate methane oxidation in anoxic cold seep sediments. [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 99, No. 11. (28 May 2002), pp. 7663-7668. by V. J. Orphan, C. H. House, K. U. Hinrichs, K. D. McKeegan, E. F. DeLong posted to anme methods nanosims by kinestetika on 2008-09-07 19:22:04 as along with 1 group microbiology_nijmegen
	Micron-scale mapping of sulfur cycling across the oxycline of a cyanobacterial mat: a paired nanoSIMS and CARD-FISH approach. [My Copy] The ISME journal, Vol. 2, No. 7. (July 2008), pp. 749-759. by D. A. Fike, C. L. Gammon, W. Ziebis, V. J. Orphan posted to methods nanosims by kinestetika on 2008-09-07 19:18:37 as along with 1 group microbiology_nijmegen
	How to get more out of molecular fingerprints: practical tools for microbial ecology [My Copy] Environmental Microbiology, Vol. 10, No. 6. (2008), pp. 1571-1581. by Massimo Marzorati, Lieven Wittebolle, Nico Boon, Daniele Daffonchio, Willy Verstraete posted to ecological_theory methods by kinestetika on 2008-08-14 08:27:30 as along with 1 person and 1 group vrich microbiology_nijmegen
	Heat production by ruminal bacteria in continuous culture and its relationship to maintenance energy. [My Copy] Journal of bacteriology, Vol. 168, No. 2. (November 1986), pp. 694-701. by J. B. Russell posted to growth_thermo methods by kinestetika on 2008-08-13 19:43:49 as along with 1 group microbiology_nijmegen
	Linking microbial phylogeny to metabolic activity at the single cell level using enhanced element labeling - catalyzed reporter deposition fluorescence in situ hybridization (EL-FISH) and NanoSIMS. [My Copy] Appl Environ Microbiol (21 March 2008) by Sebastian Behrens, Tina Lösekann, Jennifer Pett-Ridge, et al.Peter K K. Weber, Wing-On O. Ng, Bradley S S. Stevenson, Ian D D. Hutcheon, David A A. Relman, Alfred M M. Spormann posted to isotope_label methods nanosims by kinestetika on 2008-05-10 21:55:26 as along with 3 people and 2 groups skato_toyaku MALDI_Imaging_lille Katje microbiology_nijmegen MALDI Imaging
	Single-Molecule DNA Sequencing of a Viral Genome [My Copy] Science, Vol. 320, No. 5872. (4 April 2008), pp. 106-109. by Timothy D. Harris, Phillip R. Buzby, Hazen Babcock, et al.Eric Beer, Jayson Bowers, Ido Braslavsky, Marie Causey, Jennifer Colonell, James Dimeo, J. William Efcavitch, Eldar Giladi, Jaime Gill, John Healy, Mirna Jarosz, Dan Lapen, Keith Moulton, Stephen R. Quake, Kathleen Steinmann, Edward Thayer, Anastasia Tyurina, Rebecca Ward, Howard Weiss, Zheng Xie posted to metagenomics methods by kinestetika on 2008-04-04 19:11:08 as along with 24 people and 3 groups haisent pachorip katholt alexknight jbhiatt JonD lisa1 mkikkawa frohike katiehumphry operon dchughes samjlord neils zwang cabbagezs benlin caseybrown kjglennie melting austin ilyaf vmarshal guhjy moernerlab Microbial-Ecology microbiology_nijmegen
	Linking microbial community structure with function: fluorescence in situ hybridization-microautoradiography and isotope arrays. [My Copy] Curr Opin Biotechnol, Vol. 17, No. 1. (February 2006), pp. 83-91. by M. Wagner, P. H. Nielsen, A. Loy, J. L. Nielsen, H. Daims posted to dna_array ecology methods review by kinestetika on 2008-03-27 08:01:34 as along with 1 group microbiology_nijmegen
	Unravelling Microbial Communities with DNA-Microarrays: Challenges and Future Directions [My Copy] Microbial Ecology, Vol. 53, No. 3. (April 2007), pp. 498-506. by Wagner, Michael, Smidt, et al. Hauke, Loy, Alexander, Zhou, Jizhong posted to dna_array ecology methods review by kinestetika on 2008-03-27 08:00:09 as along with 1 person and 1 group vrich microbiology_nijmegen
	Insights into the genome of large sulfur bacteria revealed by analysis of single filaments. [My Copy] PLoS biology, Vol. 5, No. 9. (28 September 2007), e230. by M. Mussmann, F. Z. Hu, M. Richter, et al.D. de Beer, A. Preisler, B. B. Jørgensen, M. Huntemann, F. O. Glöckner, R. Amann, W. J. Koopman, R. S. Lasken, B. Janto, J. Hogg, P. Stoodley, R. Boissy, G. D. Ehrlich posted to genome metagenomics methods by kinestetika on 2008-02-18 11:44:02 as along with 2 people michaelbarton skato_toyaku
	Quantifying Microbial Utilization of Petroleum Hydrocarbons in Salt Marsh Sediments by Using the 13C Content of Bacterial rRNA [My Copy] Appl. Environ. Microbiol., Vol. 74, No. 4. (15 February 2008), pp. 1157-1166. by Ann Pearson, Kimberly S. Kraunz, Alex L. Sessions, Anne E. Dekas, William D. Leavitt, Katrina J. Edwards posted to ecology methods by kinestetika on 2008-02-14 08:15:25 as along with 1 group microbiology_nijmegen
	Carbon and nitrogen fixation and metabolite exchange in and between individual cells of Anabaena oscillarioides. [My Copy] ISME J, Vol. 1, No. 4. (August 2007), pp. 354-360. by R. Popa, P. K. Weber, J. Pett-Ridge, et al.J. A. Finzi, S. J. Fallon, I. D. Hutcheon, K. H. Nealson, D. G. Capone posted to methods nanosims by kinestetika on 2008-02-14 07:50:56 as along with 1 group microbiology_nijmegen
	Miniprimer PCR, a New Lens for Viewing the Microbial World [My Copy] Appl. Environ. Microbiol., Vol. 74, No. 3. (1 February 2008), pp. 840-849. by Thomas A. Isenbarger, Michael Finney, Carlos Rios-Velazquez, Jo Handelsman, Gary Ruvkun posted to biodiversity ecology methods pcr by kinestetika on 2008-02-01 18:11:56 as along with 2 people and 1 group skato_toyaku sconlan microbiology_nijmegen
	Development and application of a real-time PCR approach for quantification of uncultured bacteria in the central Baltic Sea. [My Copy] Appl Environ Microbiol, Vol. 70, No. 8. (August 2004), pp. 4971-4979. by M. Labrenz, I. Brettar, R. Christen, S. Flavier, J. Bötel, M. G. Höfle posted to ecology marine methods real_time_pcr by kinestetika on 2008-01-31 08:02:47 as along with 1 person and 2 groups jdelcampo Microbial-Ecology microbiology_nijmegen

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anammox	95
ecology	86
evolution	54
anme	50
review	47
wastewater	40
metagenomics	39
methods	36
geochemistry	34
marine	33
denitrification	32
ecological_theory	30
physiology	30
nitrification	28
biochemistry	27
genome	26
growth_thermo	19
methylotroph	17
lipids	16
crenarchaeal_nitrification	13
nirs	12
species_concept	12
ladderane	11
biodiversity	10
cell_biology	10
molecular	9
nirk	9
c1	7
cytc	7
dnra	7
niche	7
planctomycetes	7
primer_probe_design	7
15n	6
eco_micro	6
nanosims	6
novel_guilds	6
phototrophy	6
proteomics	6
black_sea	5
modelling	5
virus	5
climate	4
dna_array	4
early_earth	4
electron_microscopy	4
genetic_code	4
hao	4
iron	4
isotope_label	4
microelectrode	4
molecular_clock	4
ncycle	4
transcriptomics	4
alkane	3
freshwater	3
methanogen	3
phylogeny	3
sulphate_reduction	3
syntrophy	3
thermophile	3
archaea	2
brocadia	2
cell_size	2
crystal_structure	2
ecological_niche	2
file-import-08-09-27	2
isolation	2
janssand	2
kuenenia	2
n-fixation	2
nitric_oxide	2
nitrosopumilus	2
novel_clades	2
nrf	2
oceanography	2
peat	2
phosphorous	2
real_time_pcr	2
soil	2
sulfur	2
translation	2
3dstructure	1
acidobacteria	1
anammoxoglobus	1
biosynthetic_pathways	1
calorimetry	1
cell_envelope	1
chlamydia	1
delta13c	1
extracellular_preprocessing	1
file-import-08-09-08	1
fingerprinting	1
fuel_cell	1
glycyl_radical	1
heterotroph	1
manganese	1
metabolome	1
nanowire	1
nap	1
niches	1
nitrate_reductase	1
o18	1
oligotroph	1
pcr	1
phage	1
population_dynamics	1
poribacteria	1
prote	1
qpcr	1
quinone	1
raman	1
regulation	1
respiratory_systems	1
rnasep	1
sar11	1
scalindua	1
sequence_space	1
sequencing_technologies	1
single_cell_genomics	1
sip	1
sphagnum	1
subsurface	1
sulfate_reduction	1
symbiosis	1
synthetic_biology	1
temperature	1
tomography	1
urea	1
verrucomicrobia	1

kinestetika's methods [36 articles] Export

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