Next generation software for functional trend analysis Export

@article{citeulike:5764937, abstract = {Summary: FuncAssociate is a web application that discovers properties enriched in lists of genes or proteins that emerge from large-scale experimentation. Here we describe an updated application with a new interface and several new features. For example, enrichment analysis can now be performed within multiple gene- and protein-naming systems. This feature avoids potentially serious translation artifacts to which other enrichment analysis strategies are subject. Availability: The FuncAssociate web application is freely available to all users at http://llama.med.harvard.edu/funcassociate. Contact: fritz\_roth@hms.harvard.edu 10.1093/bioinformatics/btp498}, author = {Berriz, Gabriel F. and Beaver, John E. and Cenik, Can and Tasan, Murat and Roth, Frederick P.}, citeulike-article-id = {5764937}, citeulike-linkout-0 = {http://dx.doi.org/10.1093/bioinformatics/btp498}, citeulike-linkout-1 = {http://bioinformatics.oxfordjournals.org/content/25/22/3043.abstract}, citeulike-linkout-2 = {http://bioinformatics.oxfordjournals.org/content/25/22/3043.full.pdf}, citeulike-linkout-3 = {http://view.ncbi.nlm.nih.gov/pubmed/19717575}, citeulike-linkout-4 = {http://www.hubmed.org/display.cgi?uids=19717575}, day = {15}, doi = {10.1093/bioinformatics/btp498}, issn = {1460-2059}, journal = {Bioinformatics}, keywords = {algorithms, bioinformatics, biology, genes, genome, genomics, networks, proteins}, month = {November}, number = {22}, pages = {3043--3044}, posted-at = {2009-11-05 23:55:45}, priority = {2}, title = {Next generation software for functional trend analysis}, url = {http://dx.doi.org/10.1093/bioinformatics/btp498}, volume = {25}, year = {2009} }

TY - JOUR ID - citeulike:5764937 L3 - citeulike-article-id:5764937 N2 - Summary: FuncAssociate is a web application that discovers properties enriched in lists of genes or proteins that emerge from large-scale experimentation. Here we describe an updated application with a new interface and several new features. For example, enrichment analysis can now be performed within multiple gene- and protein-naming systems. This feature avoids potentially serious translation artifacts to which other enrichment analysis strategies are subject. Availability: The FuncAssociate web application is freely available to all users at http://llama.med.harvard.edu/funcassociate. Contact: fritz_roth@hms.harvard.edu 10.1093/bioinformatics/btp498 IS - 22 JF - Bioinformatics SN - 1460-2059 EP - 3044 TI - Next generation software for functional trend analysis VL - 25 SP - 3043 KW - algorithms KW - bioinformatics KW - biology KW - genes KW - genome KW - genomics KW - networks KW - proteins AU - Berriz, Gabriel AU - Beaver, John AU - Cenik, Can AU - Tasan, Murat AU - Roth, Frederick PY - 2009/11/15/ UR - http://dx.doi.org/10.1093/bioinformatics/btp498 ER -