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	RNA recognition by the embryonic cell fate determinant and germline totipotency factor MEX-3 [My Copy] Proceedings of the National Academy of Sciences (13 November 2009) by John M. Pagano, Brian M. Farley, Kingsley I. Essien, Sean P. Ryder posted to transcription regulatory_mechanisms regulatory regulation_of_gene_expression mrna motif genome consensus_sequence cinquinproject biology by kmdaily on 2009-11-25 03:23:51 as
	BioMart and Bioconductor: a powerful link between biological databases and microarray data analysis. [My Copy] Bioinformatics, Vol. 21, No. 16. (15 August 2005), pp. 3439-3440. by S. Durinck, Y. Moreau, A. Kasprzyk, et al.S. Davis, B. De Moor, A. Brazma, W. Huber posted to r genomics genome genes datamining data_analysis_software biology bioinformatics analysis by kmdaily on 2009-11-18 23:46:11 as along with 5 people Vincent_Rouilly kshameer dullhunk fisherp incovoma
	The UCSC Genome Browser Database: update 2009 [My Copy] Nucl. Acids Res., Vol. 37, No. suppl_1. (1 January 2009), pp. D755-761. by R. M. Kuhn, D. Karolchik, A. S. Zweig, et al.T. Wang, K. E. Smith, K. R. Rosenbloom, B. Rhead, B. J. Raney, A. Pohl, M. Pheasant, L. Meyer, F. Hsu, A. S. Hinrichs, R. A. Harte, B. Giardine, P. Fujita, M. Diekhans, T. Dreszer, H. Clawson, G. P. Barber, D. Haussler, W. J. Kent posted to motifmap human genomics genome genes datasets data computational chromosome biology bioinformatics by kmdaily on 2009-11-06 00:15:39 as along with 3 people taroleo cpwardell jfr
	Next generation software for functional trend analysis [My Copy] Bioinformatics, Vol. 25, No. 22. (15 November 2009), pp. 3043-3044. by Gabriel F. Berriz, John E. Beaver, Can Cenik, Murat Tasan, Frederick P. Roth posted to proteins networks genomics genome genes biology bioinformatics algorithms by kmdaily on 2009-11-05 23:55:45 as along with 4 people and 1 group jperkins tmmurali VGreiff guhjy Orengo Group Journal Picks
	TFIIIC Boxes in the Genome [My Copy] Cell, Vol. 125, No. 5. (02 June 2006), pp. 829-831. by L. Wallrath, P. Geyer posted to biology genome genomics regulatory sandmeyer sandmeyerproject yeast by kmdaily on 2009-07-15 17:31:12 as
	Identification of cis-acting sites for condensin loading onto budding yeast chromosomes [My Copy] Genes & Development, Vol. 22, No. 16. (15 August 2008), pp. 2215-2227. by Claudio D’ambrosio, Christine K. Schmidt, Yuki Katou, et al.Gavin Kelly, Takehiko Itoh, Katsuhiko Shirahige, Frank Uhlmann posted to biology condensin genome genomics regulatory sandmeyer sandmeyerproject transcription transposon trna ty3 yeast by kmdaily on 2009-06-17 01:07:14 as
	Clustering of yeast tRNA genes is mediated by specific association of condensin with tRNA gene transcription complexes [My Copy] Genes & Development, Vol. 22, No. 16. (15 August 2008), pp. 2204-2214. by Rebecca A. Haeusler, Matthew Pratt-Hyatt, Paul D. Good, Theresa A. Gipson, David R. Engelke posted to biology condensin genome genomics regulatory retrovirus sandmeyer sandmeyerproject transcription transposable transposon trna ty3 yeast by kmdaily on 2009-06-17 01:03:54 as
	The diploid genome sequence of an Asian individual. [My Copy] Nature, Vol. 456, No. 7218. (6 November 2008), pp. 60-65. by Jun Wang, Wei Wang, Ruiqiang Li, et al.Yingrui Li, Geng Tian, Laurie Goodman, Wei Fan, Junqing Zhang, Jun Li, Juanbin Zhang, Yiran Guo, Binxiao Feng, Heng Li, Yao Lu, Xiaodong Fang, Huiqing Liang, Zhenglin Du, Dong Li, Yiqing Zhao, Yujie Hu, Zhenzhen Yang, Hancheng Zheng, Ines Hellmann, Michael Inouye, John Pool, Xin Yi, Jing Zhao, Jinjie Duan, Yan Zhou, Junjie Qin, Lijia Ma, Guoqing Li, Zhentao Yang, Guojie Zhang, Bin Yang, Chang Yu, Fang Liang, Wenjie Li, Shaochuan Li, Dawei Li, Peixiang Ni, Jue Ruan, Qibin Li, Hongmei Zhu, Dongyuan Liu, Zhike Lu, Ning Li, Guangwu Guo, Jianguo Zhang, Jia Ye, Lin Fang, Qin Hao, Quan Chen, Yu Liang, Yeyang Su, A. San, Cuo Ping, Shuang Yang, Fang Chen, Li Li, Ke Zhou, Hongkun Zheng, Yuanyuan Ren, Ling Yang, Yang Gao, Guohua Yang, Zhuo Li, Xiaoli Feng, Karsten Kristiansen, Gane Ka-Shu K. Wong, Rasmus Nielsen, Richard Durbin, Lars Bolund, Xiuqing Zhang, Songgang Li, Huanming Yang, Jian Wang posted to bioinformatics biology genome genomics hts human sequencing by kmdaily on 2009-06-09 22:52:47 as along with 15 people rshe n00c fenghezi jonilaserson daforerog jessopher dakelley vmsr psique GustavoLacerda reyez guhjy caseybrown pkonings djkt
	Global mapping of protein-DNA interactions in vivo by digital genomic footprinting. [My Copy] Nature methods, Vol. 6, No. 4. (22 April 2009), pp. 283-289. by Jay R. Hesselberth, Xiaoyu Chen, Zhihong Zhang, et al.Peter J. Sabo, Richard Sandstrom, Alex P. Reynolds, Robert E. Thurman, Shane Neph, Michael S. Kuehn, William S. Noble, Stanley Fields, John A. Stamatoyannopoulos posted to bioinformatics biology genome genomics motif motifmap transcription by kmdaily on 2009-06-09 17:27:36 as along with 8 people absterga inesdesantiago humburg emptyhb roys coela fpattyn jbhiatt
	Identification of a TFIIIa binding site on the 5' flanking region of the TFIIIA gene [My Copy] Nucl. Acids Res., Vol. 18, No. 10. (25 May 1990), pp. 2923-2928. by Jay S. Hanas, James F. Smith posted to biology regulatory sandmeyer sandmeyerproject tfiiia transcription by kmdaily on 2009-06-05 00:43:25 as
	Mapping regions of yeast transcription factor IIIA required for DNA binding, interaction with transcription factor IIIC, and transcription activity [My Copy] J. Biol. Chem., Vol. 268, No. 15. (25 May 1993), pp. 11364-11371. by C. A. Milne, J. Segall posted to bioinformatics biology genomics regulatory retrovirus sandmeyer sandmeyerproject tfiiia transcription ty3 yeast by kmdaily on 2009-06-05 00:41:31 as
	Lentiviral vectors for cancer immunotherapy: transforming infectious particles into therapeutics [My Copy] Gene Therapy, Vol. aop, No. current. by K. Breckpot, J. L. Aerts, K. Thielemans, posted to bioinformatics biology cancer genome lentivirus retrovirus sandmeyerproject transposon ty3 virus by kmdaily on 2009-06-04 21:12:56 as
	Transcriptional Regulatory Networks in Saccharomyces cerevisiae [My Copy] Science, Vol. 298, No. 5594. (25 October 2002), pp. 799-804. by Tong I. Lee, Nicola J. Rinaldi, Francois Robert, et al.Duncan T. Odom, Ziv Bar-Joseph, Georg K. Gerber, Nancy M. Hannett, Christopher T. Harbison, Craig M. Thompson, Itamar Simon, Julia Zeitlinger, Ezra G. Jennings, Heather L. Murray, D. Benjamin Gordon, Bing Ren, John J. Wyrick, Jean-Bosco Tagne, Thomas L. Volkert, Ernest Fraenkel, David K. Gifford, Richard A. Young posted to baldi bioinformatics biology computational data genome genomics motifmap projects regulatory sandmeyer sandmeyerproject transcription yeast by kmdaily on 2009-05-27 23:57:18 as along with 32 people and 2 groups viren4388 mjoach kinop junehlee lillo80 camster snuppepuppan icases forluvoft ggrot alokm opheliav samal sameetmehta cconboy koller jguinney franklin timflutre jpoyatos lusk nklee karfunkel mimulus_99 roys njcitulike brant kristallreiner Borelli Takayuki dquest siebert dbk-lab TNT
	Genome-Wide Occupancy Profile of the RNA Polymerase III Machinery in Saccharomyces cerevisiae Reveals Loci with Incomplete Transcription Complexes [My Copy] Mol. Cell. Biol., Vol. 24, No. 10. (15 May 2004), pp. 4118-4127. by Zarmik Moqtaderi, Kevin Struhl posted to baldi biology genome genomics research sandmeyer sandmeyerproject transcription ty3 yeast by kmdaily on 2009-05-27 23:52:21 as
	The RNA polymerase III-dependent family of genes in hemiascomycetes: comparative RNomics, decoding strategies, transcription and evolutionary implications [My Copy] Nucleic Acids Research, Vol. 34, No. 6. (2006), pp. 1816-1835. by Christian Marck, Rym Kachouri-Lafond, Ingrid Lafontaine, Eric Westhof, Bernard Dujon, Henri Grosjean posted to baldi biology computational genome genomics projects regulatory sandmeyer sandmeyerproject transcription ty3 yeast by kmdaily on 2009-05-27 23:49:47 as
	Genome-wide location of yeast RNA polymerase III transcription machinery [My Copy] The EMBO Journal, Vol. 22, No. 18. (15 September 2003), pp. 4738-4747. by Olivier Harismendy, Christiane-Gabrielle Gendrel, Pascal Soularue, et al.Xavier Gidrol, André Sentenac, Michel Werner, Olivier Lefebvre posted to baldi biology genome genomics projects sandmeyer sandmeyerproject transcription ty3 yeast by kmdaily on 2009-05-27 23:48:03 as
	The RNA polymerase III transcriptome revealed by genome-wide localization and activity–occupancy relationships [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 100, No. 25. (9 December 2003), pp. 14695-14700. by Douglas N. Roberts, Allen J. Stewart, Jason T. Huff, Bradley R. Cairns posted to baldi biology genome genomics sandmeyer sandmeyerproject transcription yeast by kmdaily on 2009-05-27 23:38:48 as
	The RNA polymerase III transcription apparatus1 [My Copy] Journal of Molecular Biology, Vol. 310, No. 1. (29 June 2001), pp. 1-26. by Geiduschek, George A. Kassavetis posted to baldi biology projects sandmeyer sandmeyerproject transcription ty3 yeast by kmdaily on 2009-05-27 23:36:58 as
	Transcription by RNA Polymerase III [My Copy] Annual Review of Biochemistry, Vol. 57, No. 1. (1988), pp. 873-914. by E. P. Geiduschek, Tocchini G. P. Valentini posted to baldi biology projects sandmeyer sandmeyerproject transcription transposon ty3 yeast by kmdaily on 2009-05-27 23:35:00 as
	The Star RNA binding proteins Gld-1, Qki, Sam68 and SLM-2 bind bipartite RNA motifs [My Copy] BMC Molecular Biology, Vol. 10 (20 May 2009), 47. by Andre Galarneau, Stephane Richard posted to baldi bioinformatics biology genome genomics motif nematode projects regulatory worm cinquinproject by kmdaily on 2009-05-27 01:21:48 as
	Identification of genes expressed in the hermaphrodite germ line of C. elegans using SAGE [My Copy] BMC Genomics, Vol. 10 (09 May 2009), 213. by Xin, Dave Hansen posted to baldi bioinformatics biology genome genomics motif nematode projects regulatory transcription worm cinquinproject by kmdaily on 2009-05-27 01:18:38 as
	A Global Profile of Germline Gene Expression in C. elegans [My Copy] Molecular Cell, Vol. 6, No. 3. (September 2000), pp. 605-616. by V. Reinke posted to baldi bioinformatics biology motif motifmap nematode projects worm cinquinproject by kmdaily on 2009-05-26 19:11:37 as
	Optimized design and assessment of whole genome tiling arrays. [My Copy] Bioinformatics, Vol. 23, No. 13. (1 July 2007) by Stefan Gräf, Fiona G G G. Nielsen, Stefan Kurtz, et al.Martijn A A. Huynen, Ewan Birney, Henk Stunnenberg, Paul Flicek posted to algorithms array bioinformatics biology computational genome genomics probe repeats tiling by kmdaily on 2009-02-14 08:10:27 as along with 1 group Bioinformatics
	The functions of animal microRNAs [My Copy] Nature In Nature, Vol. 431, No. 7006. (15 September 2004), pp. 350-355. by Victor Ambros posted to biology genome genomics mirna research by kmdaily on 2008-12-16 18:56:18 as along with 6 people and 2 groups exsu684 jfr dchughes Fritz skoch erbon microRNA neurolit
	MicroRNAsGenomics, Biogenesis, Mechanism, and Function [My Copy] Cell, Vol. 116, No. 2. (23 January 2004), pp. 281-297. by D. Bartel posted to bioinformatics biology genome genomics mirna research by kmdaily on 2008-12-16 18:54:36 as along with 13 people shazo homonecloco vprieto druvus myzhang guhjy dayjm balabu skoch lp2 psique maralena tolot27
	Principles of MicroRNA–Target Recognition [My Copy] PLoS Biol, Vol. 3, No. 3. (15 February 2005), e85. by Julius Brennecke, Alexander Stark, Robert B. Russell, Stephen M. Cohen posted to bioinformatics biology genomics mirna networks regulatory research by kmdaily on 2008-12-16 18:33:52 as along with 13 people and 2 groups marywaye stharward sterovetta giovenko rklancer tardigrade andersbj mtagaya cdawson heliopais tauberj jfr ronnyherc microRNA GIG
	TRANSFAC: transcriptional regulation, from patterns to profiles. [My Copy] Nucleic Acids Res, Vol. 31, No. 1. (1 January 2003), pp. 374-378. by V. Matys, E. Fricke, R. Geffers, et al.E. Gössling, M. Haubrock, R. Hehl, K. Hornischer, D. Karas, A. E. Kel, O. V. Kel-Margoulis, D. U. Kloos, S. Land, B. Lewicki-Potapov, H. Michael, R. Münch, I. Reuter, S. Rotert, H. Saxel, M. Scheer, S. Thiele, E. Wingender posted to transcription search research regulatory motifmap motif genomics genome data biology bioinformatics by kmdaily on 2008-08-12 16:35:17 as along with 8 people and 1 group raylim aprasad aalibes setar chad_davis GustavoLacerda marti Auger Dead 60's
	Natural Similarity Measures between Position Frequency Matrices with an Application to Clustering [My Copy] Bioinformatics (2 January 2008), btm610. by Utz J. Pape, Sven Rahmann, Martin Vingron posted to algorithms bioinformatics biology computational genome genomics metrics regulatory transcription by kmdaily on 2008-08-12 02:17:19 as along with 4 people nklee maximilianh mclarenv csdhwang
	Whole-genome re-sequencing. [My Copy] Current opinion in genetics & development In Genomes and evolution, Vol. 16, No. 6. (December 2006), pp. 545-552. by David R. Bentley posted to bioinformatics biology genome genomics research by kmdaily on 2008-05-30 02:19:34 as along with 14 people and 3 groups pristanna rshe druvus n00c anuskap mmartin jameswasmuth usagi-kirin jmeppley frohike indigoviolet dchughes azazello jo_davies EisenLab G4ID Genetics-of-Gambling
	Advanced sequencing technologies and their wider impact in microbiology [My Copy] J Exp Biol, Vol. 210, No. 9. (1 May 2007), pp. 1518-1525. by Neil Hall posted to bioinformatics biology genome genomics research by kmdaily on 2008-05-30 02:19:04 as along with 5 people felsani Pascalichouchou xingxu rschulz bozdagd
	ESPERR: Learning strong and weak signals in genomic sequence alignments to identify functional elements [My Copy] Genome Res. (19 October 2006), gr.4537706. by James Taylor, Svitlana Tyekucheva, David C. King, Ross C. Hardison, Webb Miller, Francesca Chiaromonte posted to algorithms bioinformatics biology chromosome computational datamining genome genomics machinelearning motif regulatory search transcription by kmdaily on 2007-12-07 17:51:10 as along with 1 person timflutre
	The UCSC Known Genes [My Copy] Bioinformatics, Vol. 22, No. 9. (24 February 2006), pp. btl048-1046. by Fan Hsu, W. James Kent, Hiram Clawson, Robert M. Kuhn, Mark Diekhans, David Haussler posted to bioinformatics biology computational genome genomics research transcription by kmdaily on 2007-12-06 18:26:04 as along with 5 people manduca nedwards wenhan antonkratz rschulz
	Computational detection and location of transcription start sites in mammalian genomic DNA. [My Copy] Genome research, Vol. 12, No. 3. (1 March 2002), pp. 458-461. by T. A. Down, T. J. Hubbard posted to bioinformatics biology computational genome genomics motif regulatory research search transcription by kmdaily on 2007-12-04 07:02:47 as along with 4 people timhubbard tonamswish smiddha olympos
	What is a gene, post-ENCODE? History and updated definition [My Copy] Genome Research, Vol. 17, No. 6. (June 2007), pp. 669-681. by Mark B. Gerstein, Can Bruce, Joel S. Rozowsky, et al.Deyou Zheng, Jiang Du, Jan O. Korbel, Olof Emanuelsson, Zhengdong D. Zhang, Sherman Weissman, Michael Snyder posted to biology genome genomics research by kmdaily on 2007-10-04 22:59:51 as along with 35 people and 4 groups daveGerrard Yanno inesdesantiago kentz ddcttrl bertelsen tmarscha thegoose2 burak guhjy carolh12 eweaver dpollard balicea dchughes dullhunk madhadron cottrell grahamc egonw ghattem sujaikumar Garamonfok PunkRock jasonbobe PredictER cabbagezs Jporci krokicki antonkratz Minty hpaces tharris altotor mjoach Bioinformatics EisenLab G4ID Genetics-of-Gambling
	A Primer on Learning in Bayesian Networks for Computational Biology [My Copy] PLoS Comput Biol, Vol. 3, No. 8. (31 August 2007), e129. by Chris J. Needham, James R. Bradford, Andrew J. Bulpitt, David R. Westhead posted to analysis bayesian bioinformatics biology computational networks research by kmdaily on 2007-09-04 20:51:56 as along with 18 people and 1 group Jporci colm abhishek_tiwari kshameer tonamswish Borelli toerst aviad_work druvus giovenko jo_davies balicea macle GeeSharpMinor firoozye sobolevnrm bmaust schelhorn baker-group

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genomics	45
genome	43
bioinformatics	40
biology	35
regulatory	23
transcription	21
computational	18
motif	17
baldi	15
research	15
sandmeyerproject	14
projects	13
sandmeyer	12
yeast	12
algorithms	11
ty3	10
motifmap	8
analysis	7
cinquinproject	6
search	6
transposon	5
data	5
worm	5
nematode	5
chromosome	4
mirna	4
motifdiscoveryproject	4
datamining	4
genes	3
networks	3
machinelearning	3
retrovirus	3
metrics	3
transposable	2
repeats	2
condensin	2
ranking	2
cheminformatics	2
bayesian	2
human	2
tfiiia	2
trna	2
hts	1
sequencing	1
regulatory_mechanisms	1
cancer	1
bedroc	1
molecules	1
evolution	1
suffix_trees	1
rearrangement	1
virus	1
proteins	1
consensus_sequence	1
array	1
data_analysis_software	1
mrna	1
r	1
probe	1
regulation_of_gene_expression	1
roc	1
similarity	1
lentivirus	1
datasets	1
tiling	1
virtualscreening	1
elements	1

kmdaily's biology [35 articles] Export

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