koller's library 145 articles Export

	Predicting expression patterns from regulatory sequence in Drosophila segmentation [My Copy] Nature, Vol. 451, No. 7178. (02 January 2008), pp. 535-540. by Eran Segal, Tali Raveh-Sadka, Mark Schroeder, Ulrich Unnerstall, Ulrike Gaul posted to no-tag by koller on 2009-02-02 07:43:49 as along with 19 people and 2 groups TRHvidsten daveGerrard dlmace ptrobajo isimpson dakelley tmmurali eckart_bindewald djkt bootsy biomcgary idonaldson roys emptyhb pkharchenko meiklej jrest tresch siebert BergmanLab TranscriptionalRegulationWithThermodynamicModels
	A single gene network accurately predicts phenotypic effects of gene perturbation in Caenorhabditis elegans. [My Copy] Nature genetics, Vol. 40, No. 2. (27 February 2008), pp. 181-188. by Insuk Lee, Ben Lehner, Catriona Crombie, Wendy Wong, Andrew G. Fraser, Edward M. Marcotte posted to no-tag by koller on 2009-02-02 07:29:17 as along with 16 people and 1 group ptrobajo bertelsen thegoose2 AnzaA pegwang oryadna tharris guhjy tmmurali balicea capitall roys jiny kintoki meiklej jfr C. elegans / WormBase
	Pathway-Based Approaches for Analysis of Genomewide Association Studies. [My Copy] American journal of human genetics, Vol. 81, No. 6. (26 October 2007) by Kai Wang, Mingyao Li, Maja Bucan posted to no-tag by koller on 2009-02-02 06:42:20 as along with 8 people kimorley maren psique zufar tg150 wimufi jessopher buyske
	A Genomic Pathway Approach to a Complex Disease: Axon Guidance and Parkinson Disease [My Copy] PLoS Genet, Vol. 3, No. 6. (15 June 2007), e98. by Timothy G. Lesnick, Spiridon Papapetropoulos, Deborah C. Mash, et al.Jarlath Ffrench-Mullen, Lina Shehadeh, Mariza de Andrade, John R. Henley, Walter A. Rocca, J. Eric Ahlskog, Demetrius M. Maraganore posted to no-tag by koller on 2009-02-02 06:40:06 as along with 7 people ajbattle j_rodriguez jeremymiller daforerog buyske rdiaz cabbagezs
	Network modeling links breast cancer susceptibility and centrosome dysfunction [My Copy] Nature Genetics, Vol. 39, No. 11. (07 October 2007), pp. 1338-1349. by Miguel A. Pujana, Jing-Dong J. Han, Lea M. Starita, et al.Kristen N. Stevens, Muneesh Tewari, Jin S. Ahn, Gad Rennert, Victor Moreno, Tomas Kirchhoff, Bert Gold, Volker Assmann, Wael M. ElShamy, Jean-Francois Rual, Douglas Levine, Laura S. Rozek, Rebecca S. Gelman, Kristin C. Gunsalus, Roger A. Greenberg, Bijan Sobhian, Nicolas Bertin, Kavitha Venkatesan, Nono Ayivi-Guedehoussou, Xavier Sole, Pilar Hernandez, Conxi Lazaro, Katherine L. Nathanson, Barbara L. Weber, Michael E. Cusick, David E. Hill, Kenneth Offit, David M. Livingston, Stephen B. Gruber, Jeffrey D. Parvin, Marc Vidal posted to no-tag by koller on 2009-02-02 06:38:10 as along with 11 people and 1 group tonamswish ajbattle jaimie jmuhlich jfr ealloza cjeans nedwards jdiezperezj phoenixzxl chrisamiller BioinfoCIPF
	A "Silent" Polymorphism in the MDR1 Gene Changes Substrate Specificity [My Copy] Science, Vol. 315, No. 5811. (26 January 2007), pp. 525-528. by Chava Kimchi-Sarfaty, Jung M. Oh, In-Wha Kim, et al.Zuben E. Sauna, Anna M. Calcagno, Suresh V. Ambudkar, Michael M. Gottesman posted to no-tag by koller on 2009-02-02 05:48:12 as along with 10 people and 3 groups ajbattle songpku bicko dpollard gpalidwor dchughes cwbrown massivemayhem shawnh msafi EisenLab G4ID Genetics-of-Gambling
	Gene expression profiling in follicular lymphoma to assess clinical aggressiveness and to guide the choice of treatment. [My Copy] Blood, Vol. 105, No. 1. (1 January 2005), pp. 301-307. by A. M. Glas, M. J. Kersten, L. J. Delahaye, et al.A. T. Witteveen, R. E. Kibbelaar, A. Velds, L. F. Wessels, P. Joosten, R. M. Kerkhoven, R. Bernards, J. H. van Krieken, P. M. Kluin, L. J. van't Veer, D. de Jong posted to no-tag by koller on 2009-02-02 00:55:27 as
	Gene-expression and immunohistochemical study of specific T-cell subsets and accessory cell types in the transformation and prognosis of follicular lymphoma. [My Copy] Journal of clinical oncology : official journal of the American Society of Clinical Oncology, Vol. 25, No. 4. (1 February 2007), pp. 390-398. by A. M. Glas, L. Knoops, L. Delahaye, et al.M. J. Kersten, R. E. Kibbelaar, L. A. Wessels, R. van Laar, J. H. van Krieken, J. W. Baars, J. Raemaekers, P. M. Kluin, L. J. van't Veer, D. de Jong posted to no-tag by koller on 2009-02-02 00:54:39 as
	Genomic expression programs in the response of yeast cells to environmental changes. [My Copy] Molecular biology of the cell, Vol. 11, No. 12. (December 2000), pp. 4241-4257. by A. P. Gasch, P. T. Spellman, C. M. Kao, et al.O. Carmel-Harel, M. B. Eisen, G. Storz, D. Botstein, P. O. Brown posted to no-tag by koller on 2009-02-01 22:28:39 as along with 9 people and 2 groups jdoconnell lawraga kristallreiner jbsaltz lfriedl lesander raiyar roys tvdbulck kdl steinmetzlab
	eBLOCKs: enumerating conserved protein blocks to achieve maximal sensitivity and specificity [My Copy] Nucleic Acids Research, Vol. 33, No. Supplement 1. (1 January 2005), D178. by Qiaojuan J. Su, Lin Lu, Serge Saxonov, Douglas L. Brutlag posted to no-tag by koller on 2009-02-01 05:58:27 as
	Relative Impact of Nucleotide and Copy Number Variation on Gene Expression Phenotypes [My Copy] Science, Vol. 315, No. 5813. (9 February 2007), pp. 848-853. by Barbara E. Stranger, Matthew S. Forrest, Mark Dunning, et al.Catherine E. Ingle, Claude Beazley, Natalie Thorne, Richard Redon, Christine P. Bird, Anna de Grassi, Charles Lee, Chris Tyler-Smith, Nigel Carter, Stephen W. Scherer, Simon Tavare, Panagiotis Deloukas, Matthew E. Hurles, Emmanouil T. Dermitzakis posted to no-tag by koller on 2009-01-31 22:51:37 as along with 31 people and 5 groups lp2 daveGerrard sameersoi timhubbard Zephyrus ajbattle jonilaserson ilyashl emptyhb buyske zufar waszak daed psique jo_davies srp33 guhjy jfr dpollard balicea rdiaz qfwills djkt vplagnol shigepong jlangdon xingxu cisevol caseybrown frohike jandot Roswell Cancer Crosstalk Visiting Position Bioinformatics EisenLab cis-regulatory-evolution
	Genotype Score in Addition to Common Risk Factors for Prediction of Type 2 Diabetes [My Copy] N Engl J Med, Vol. 359, No. 21. (20 November 2008), pp. 2208-2219. by James B. Meigs, Peter Shrader, Lisa M. Sullivan, et al.Jarred B. Mcateer, Caroline S. Fox, Josee Dupuis, Alisa K. Manning, Jose C. Florez, Peter W. Wilson, Ralph B. D'Agostino, Adrienne L. Cupples posted to no-tag by koller on 2009-01-31 21:18:00 as along with 5 people jmanning2k chemistmd wimufi guhjy jbhiatt
	Statistical analysis of pathogenicity of somatic mutations in cancer. [My Copy] Genetics, Vol. 173, No. 4. (August 2006), pp. 2187-2198. by C. Greenman, R. Wooster, P. A. Futreal, M. R. Stratton, D. F. Easton posted to no-tag by koller on 2009-01-31 21:07:36 as along with 1 person bicko
	Patterns of somatic mutation in human cancer genomes [My Copy] Nature, Vol. 446, No. 7132. (08 March 2007), pp. 153-158. by Christopher Greenman, Philip Stephens, Raffaella Smith, et al.Gillian L. Dalgliesh, Christopher Hunter, Graham Bignell, Helen Davies, Jon Teague, Adam Butler, Claire Stevens, Sarah Edkins, Sarah O/'Meara, Imre Vastrik, Esther E. Schmidt, Tim Avis, Syd Barthorpe, Gurpreet Bhamra, Gemma Buck, Bhudipa Choudhury, Jody Clements, Jennifer Cole, Ed Dicks, Simon Forbes, Kris Gray, Kelly Halliday, Rachel Harrison, Katy Hills, Jon Hinton, Andy Jenkinson, David Jones, Andy Menzies, Tatiana Mironenko, Janet Perry, Keiran Raine, Dave Richardson, Rebecca Shepherd, Alexandra Small, Calli Tofts, Jennifer Varian, Tony Webb, Sofie West, Sara Widaa, Andy Yates, Daniel P. Cahill, David N. Louis, Peter Goldstraw, Andrew G. Nicholson, Francis Brasseur, Leendert Looijenga, Barbara L. Weber, Yoke-Eng Chiew, Anna deFazio, Mel F. Greaves, Anthony R. Green, Peter Campbell, Ewan Birney, Douglas F. Easton, Georgia Chenevix-Trench, Min-Han Tan, Sok K. Khoo, Bin T. Teh, Siu T. Yuen, Suet Y. Leung, Richard Wooster, P. Andrew Futreal, Michael R. Stratton posted to no-tag by koller on 2009-01-31 20:09:22 as along with 15 people Neeperando xingxu ssgong dbensasson kentsis jfr massivemayhem efge Garamonfok daed Petersarkies ramensky frohike cerami srp33
	Population Structure and Eigenanalysis [My Copy] PLoS Genet, Vol. 2, No. 12. (22 December 2006), e190. by Nick Patterson, Alkes L. Price, David Reich posted to no-tag by koller on 2009-01-31 19:57:15 as along with 5 people and 1 group engelhardt ArtemPankin theseuskf vplagnol caseybrown Khavkin's lab
	A genome-wide association study identifies novel risk loci for type 2 diabetes. [My Copy] Nature, Vol. 445, No. 7130. (22 February 2007), pp. 881-885. by Robert Sladek, Ghislain Rocheleau, Johan Rung, et al.Christian Dina, Lishuang Shen, David Serre, Philippe Boutin, Daniel Vincent, Alexandre Belisle, Samy Hadjadj, Beverley Balkau, Barbara Heude, Guillaume Charpentier, Thomas J. Hudson, Alexandre Montpetit, Alexey V. Pshezhetsky, Marc Prentki, Barry I. Posner, David J. Balding, David Meyre, Constantin Polychronakos, Philippe Froguel posted to no-tag by koller on 2009-01-31 17:36:17 as along with 14 people wagrob liqbbi ptrobajo jclau jbhiatt renewang jo_davies brant johncumbers msierk joepickrell sim82 dbgrant mcgannd
	The Connectivity Map: Using Gene-Expression Signatures to Connect Small Molecules, Genes, and Disease [My Copy] Science, Vol. 313, No. 5795. (29 September 2006), pp. 1929-1935. by Justin Lamb, Emily D. Crawford, David Peck, et al.Joshua W. Modell, Irene C. Blat, Matthew J. Wrobel, Jim Lerner, Jean-Philippe Brunet, Aravind Subramanian, Kenneth N. Ross, Michael Reich, Haley Hieronymus, Guo Wei, Scott A. Armstrong, Stephen J. Haggarty, Paul A. Clemons, Ru Wei, Steven A. Carr, Eric S. Lander, Todd R. Golub posted to expression networks phenotype by koller on 2006-10-07 00:27:53 as along with 27 people and 9 groups ipark-kaist bertelsen mingzhi AbnerCYH Dulcinea dansullivanblk BragilMassoud guhjy kuhn jfr yas balajis marcius lhonigberg neveaire kengg ealloza mlovell jdiggans ezra jeremymiller frohike massivemayhem lp2 pablomendes jdiezperezj askrajiv Biostatistics Computational-Genomics Bioinformatics Neuroscience T_lab BioinfoCIPF SGU-CIPF GeschwindLab Plantandetc
	Co-evolution of transcriptional and post-translational cell-cycle regulation [My Copy] Nature (27 September 2006) by Lars J. Jensen, Thomas S. Jensen, Ulrik de Lichtenberg, Søren Brunak, Peer Bork posted to complex networks p2p regulatory signaling transcription by koller on 2006-10-07 00:24:38 as along with 7 people and 1 group JAShapiro adepace olympos ccr cjeans kluck larsjuhljensen EisenLab
	Annotation transfer between genomes: protein-protein interologs and protein-DNA regulogs. [My Copy] Genome research, Vol. 14, No. 6. (June 2004), pp. 1107-1118. by Haiyuan Yu, Nicholas M. Luscombe, Hao Xin X. Lu, et al.Xiaowei Zhu, Yu Xia, Jing-Dong D. Han, Nicolas Bertin, Sambath Chung, Marc Vidal, Mark Gerstein posted to cis-regulation evolution network p2p regulatory by koller on 2006-09-23 01:56:15 as along with 12 people and 1 group kiekyon rsaito thegoose2 robfsouza carlk tharris bicko dragonrez chad_davis balajis cjeans cerca C. elegans / WormBase
	Utilizing logical relationships in genomic data to decipher cellular processes. [My Copy] FEBS J, Vol. 272, No. 20. (October 2005), pp. 5110-5118. by P. M. Bowers, B. D. O'Connor, S. J. Cokus, E. Sprinzak, T. O. Yeates, D. Eisenberg posted to evolution expression network by koller on 2006-09-20 00:58:37 as along with 1 person and 1 group lfriedl kdl
	Genome-wide Map of Nucleosome Acetylation and Methylation in Yeast [My Copy] Cell, Vol. 122, No. 4. (26 August 2005), pp. 517-527. by Dmitry K. Pokholok, Christopher T. Harbison, Stuart Levine, et al.Megan Cole, Nancy M. Hannett, Tong I. Lee, George W. Bell, Kimberly Walker, P. Alex Rolfe, Elizabeth Herbolsheimer posted to chip2 chromatin regulatory by koller on 2006-09-19 01:51:41 as along with 6 people and 1 group humburg hagechouchin443 nucleosome kengg olympos redfish99213 Plantandetc
	Transcriptional regulatory code of a eukaryotic genome [My Copy] Nature, Vol. 431, No. 7004. (2004), pp. 99-104. by Christopher T. Harbison, Benjamin D. Gordon, Tong I. Lee, et al.Nicola J. Rinaldi, Kenzie D. Macisaac, Timothy W. Danford, Nancy M. Hannett, Jean-Bosco Tagne, David B. Reynolds, Jane Yoo, Ezra G. Jennings, Julia Zeitlinger, Dmitry K. Pokholok, Manolis Kellis, Alex P. Rolfe, Ken T. Takusagawa, Eric S. Lander, David K. Gifford, Ernest Fraenkel, Richard A. Young posted to chip2 cis-regulation network regulatory transcription by koller on 2006-09-19 01:50:34 as along with 28 people and 8 groups daveGerrard Dulce talponer wowalz siebert alokm tuck lyongu kaspermunch dpollard balicea kt dchughes nirfriedman cmm nickluscombe kengg gespim lusk nklee cisevol njcitulike xili03 brant mariakmejia kristallreiner snow_dragon aalibes Bioinformatics EisenLab FAB-lab G4ID EBI-regulation Plantandetc Genetics-of-Gambling BergmanLab
	Histone acetylation and transcriptional regulation in the genome of Saccharomyces cerevisiae [My Copy] Bioinformatics, Vol. 22, No. 4. (15 February 2006), pp. 392-399. by Xiang Guo, Kay Tatsuoka, Rongxiang Liu posted to chromatin cis-regulation regulatory by koller on 2006-09-19 01:48:54 as along with 2 people and 1 group nirfriedman kengg Plantandetc
	Core transcriptional regulatory circuitry in human hepatocytes. [My Copy] Mol Syst Biol, Vol. 2 (2006) by D. T. Odom, R. D. Dowell, E. S. Jacobsen, et al.L. Nekludova, P. A. Rolfe, T. W. Danford, D. K. Gifford, E. Fraenkel, G. I. Bell, R. A. Young posted to cis-regulation network network_motif regulatory by koller on 2006-09-19 01:35:52 as along with 5 people and 1 group Schmidtc cconboy kengg jdiggans gdb Plantandetc
	Evidence for an instructive mechanism of de novo methylation in cancer cells [My Copy] Nature Genetics, Vol. 38, No. 2. (24 January 2006), pp. 149-153. by Ilana Keshet, Yeshayahu Schlesinger, Shlomit Farkash, et al.Eyal Rand, Merav Hecht, Eran Segal, Eli Pikarski, Richard A. Young, Alain Niveleau, Howard Cedar, Itamar Simon posted to network regulatory sequence_motif by koller on 2006-09-19 01:34:56 as along with 3 people tabu nirfriedman rschulz
	Identification and analysis of evolutionarily cohesive functional modules in protein networks. [My Copy] Genome Res (31 January 2006) by Mónica Campillos, Christian von Mering, Lars Juhl J. Jensen, Peer Bork posted to evolution modules network p2p by koller on 2006-09-19 01:14:42 as along with 8 people and 2 groups Garamonfok lfriedl balajis nirfriedman nickluscombe dbgoodman larsjuhljensen carlk kdl EBI-regulation
	A metabolic network in the evolutionary context: Multiscale structure and modularity [My Copy] Proceedings of the National Academy of Sciences, Vol. 103, No. 23. (6 June 2006), pp. 8774-8779. by Victor Spirin, Mikhail S. Gelfand, Andrey A. Mironov, Leonid A. Mirny posted to evolution metabolic modules network by koller on 2006-09-17 05:01:14 as along with 6 people and 1 group roys sergiun renatomilani tny cmm fishtank FAB-lab
	The Yeast Protein Interaction Network Evolves Rapidly and Contains Few Redundant Duplicate Genes [My Copy] Mol Biol Evol, Vol. 18, No. 7. (1 July 2001), pp. 1283-1292. by Andreas Wagner posted to evolution network p2p by koller on 2006-09-11 06:51:49 as along with 7 people dannya222 chica kentz dragonrez shivaram gurkanbebek gcalda
	Network motifs in integrated cellular networks of transcriptionâregulation and proteinâprotein interaction [My Copy] Proceedings of the National Academy of Sciences of the United States of America, Vol. 101, No. 16. (20 April 2004), pp. 5934-5939. by Esti Yeger-Lotem, Shmuel Sattath, Nadav Kashtan, et al.Shalev Itzkovitz, Ron Milo, Ron Y. Pinter, Uri Alon, Hanah Margalit posted to network network_motif p2p regulatory by koller on 2006-09-11 06:37:45 as along with 12 people and 4 groups nurban sergiun cswinburne camster snuppepuppan dbk korakot LeightonP hununu jtextori maralena carlk streptomyces Philosophy_of_Information dbk-lab Blog_and_Wiki_Research
	Integration of chemical-genetic and genetic interaction data links bioactive compounds to cellular target pathways [My Copy] Nature Biotechnology, Vol. 22, No. 1. (07 December 2003), pp. 62-69. by Ainslie B. Parsons, Renee L. Brost, Huiming Ding, et al.Zhijian Li, Chaoying Zhang, Bilal Sheikh, Grant W. Brown, Patricia M. Kane, Timothy R. Hughes, Charles Boone posted to genetic-inter network phenotype by koller on 2006-09-11 06:29:55 as along with 3 people and 1 group mtaschuk nickluscombe marck EBI-regulation
	Regulatory on/off minimization of metabolic flux changes after genetic perturbations. [My Copy] Proc Natl Acad Sci U S A, Vol. 102, No. 21. (24 May 2005), pp. 7695-7700. by T. Shlomi, O. Berkman, E. Ruppin posted to metabolic network regulatory by koller on 2006-09-11 06:16:57 as along with 3 people yujiangwang michaelbarton roys
	Structure-based assembly of protein complexes in yeast. [My Copy] Science, Vol. 303, No. 5666. (26 March 2004), pp. 2026-2029. by P. Aloy, B. Böttcher, H. Ceulemans, et al.C. Leutwein, C. Mellwig, S. Fischer, A. C. Gavin, P. Bork, G. Superti-Furga, L. Serrano, R. B. Russell posted to complex p2p reconstruction by koller on 2006-09-11 06:03:32 as along with 5 people semin chad_davis ruvido Evangelia mingzhi
	Protein interaction networks from yeast to human. [My Copy] Current opinion in structural biology, Vol. 14, No. 3. (June 2004), pp. 292-299. by Peer Bork, Lars J. Jensen, Christian von Mering, Arun K. Ramani, Insuk Lee, Edward M. Marcotte posted to network p2p review by koller on 2006-09-11 05:59:16 as along with 9 people aelef jiny kuhn grahamc cjeans lpfernandes selrac Evangelia larsjuhljensen
	STRING: known and predicted protein-protein associations, integrated and transferred across organisms. [My Copy] Nucleic Acids Res, Vol. 33, No. Database issue. (1 January 2005) by C. von Mering, L. J. Jensen, B. Snel, et al.S. D. Hooper, M. Krupp, M. Foglierini, N. Jouffre, M. A. Huynen, P. Bork posted to network p2p reconstruction resource by koller on 2006-09-11 05:48:41 as along with 7 people and 2 groups kuhn lfriedl nickluscombe iris_2001 Evangelia larsjuhljensen carlk kdl EBI-regulation
	Structure and evolution of transcriptional regulatory networks. [My Copy] Curr Opin Struct Biol, Vol. 14, No. 3. (June 2004), pp. 283-291. by M. M. Babu, N. M. Luscombe, L. Aravind, M. Gerstein, S. A. Teichmann posted to cis-regulation evolution regulatory sequence_motif by koller on 2006-09-11 05:35:16 as along with 6 people and 2 groups kaarsinogen tny kengg tvdbulck cjeans karfunkel Bioinformatics Plantandetc
	Design principles of molecular networks revealed by global comparisons and composite motifs [My Copy] Genome Biology, Vol. 7 (19 July 2006), R55. by Haiyuan Yu, Yu Xia, Valery Trifonov, Mark Gerstein posted to metabolic network network_motif p2p regulatory by koller on 2006-09-11 05:32:17 as along with 6 people and 2 groups carlk indigoviolet jdiggans Takayuki beete vertikalist EisenLab BTS-PT-AS-CS
	Multiple knockout analysis of genetic robustness in the yeast metabolic network [My Copy] Nature Genetics, Vol. 38, No. 9. (29 August 2006), pp. 993-998. by David Deutscher, Isaac Meilijson, Martin Kupiec, Eytan Ruppin posted to genetic-inter metabolic network by koller on 2006-09-11 05:26:50 as along with 9 people and 1 group shung nzm tmmurali raiyar cjeans patrycja_missiuro edwardmorrissey hryk jiny steinmetzlab
	Genetics of gene expression surveyed in maize, mouse and man [My Copy] Nature, Vol. 422, No. 6929. (20 March 2003), pp. 297-302. by Eric E. Schadt, Stephanie A. Monks, Thomas A. Drake, et al.Aldons J. Lusis, Nam Che, Veronica Colinayo, Thomas G. Ruff, Stephen B. Milligan, John R. Lamb, Guy Cavet, Peter S. Linsley, Mao Mao, Roland B. Stoughton, Stephen H. Friend posted to association reconstruction regulatory by koller on 2006-09-06 23:53:36 as along with 9 people and 1 group ajbattle roys adepace lp2 hms jo_davies parkcc mcgannd caseybrown EisenLab
	Integrating genetic and gene expression data: application to cardiovascular and metabolic traits in mice. [My Copy] Mammalian genome : official journal of the International Mammalian Genome Society, Vol. 17, No. 6. (June 2006), pp. 466-479. by Thomas A. Drake, Eric E. Schadt, Aldons J. Lusis posted to association expression network regulatory review by koller on 2006-09-06 23:37:18 as along with 4 people guhjy roys jo_davies srp33
	Mapping determinants of human gene expression by regional and genome-wide association [My Copy] Nature, Vol. 437, No. 7063., pp. 1365-1369. by Vivian G. Cheung, Richard S. Spielman, Kathryn G. Ewens, Teresa M. Weber, Michael Morley, Joshua T. Burdick posted to association expression regulatory by koller on 2006-09-06 23:27:36 as along with 8 people sameersoi athma xingxu pcahan1 balajis qfwills ashandanj jo_davies
	GENOME-WIDE ASSOCIATION STUDIES: THEORETICAL AND PRACTICAL CONCERNS [My Copy] Nat Rev Genet, Vol. 6, No. 2. (February 2005), pp. 109-118. by William Y. Wang, Bryan J. Barratt, David G. Clayton, John A. Todd posted to association reconstruction regulatory by koller on 2006-09-06 23:26:54 as along with 3 people debasis ekostem vplagnol
	Cis-acting expression quantitative trait loci in mice. [My Copy] Genome Res, Vol. 15, No. 5. (May 2005), pp. 681-691. by S. Doss, E. E. Schadt, T. A. Drake, A. J. Lusis posted to association cis-regulation network regulatory by koller on 2006-09-06 23:18:42 as along with 1 person roys
	An integrative genomics approach to infer causal associations between gene expression and disease [My Copy] Nature Genetics, Vol. 37, No. 7. (19 June 2005), pp. 710-717. by Eric E. Schadt, John Lamb, Xia Yang, et al.Jun Zhu, Steve Edwards, Debraj Guhathakurta, Solveig K. Sieberts, Stephanie Monks, Marc Reitman, Chunsheng Zhang, Pek Y. Lum, Amy Leonardson, Rolf Thieringer, Joseph M. Metzger, Liming Yang, John Castle, Haoyuan Zhu, Shera F. Kash, Thomas A. Drake, Alan Sachs, Aldons J. Lusis posted to association expression network reconstruction regulatory by koller on 2006-09-06 22:54:28 as along with 16 people and 1 group roys nicholso lawraga ocs pcahan1 tuck brant ckehl giovanni lp2 dejori natstreet jo_davies caseybrown chrisamiller mitko GeschwindLab
	Integrating Genetic and Network Analysis to Characterize Genes Related to Mouse Weight [My Copy] PLoS Genet, Vol. 2, No. 8. (18 August 2006), e130. by Anatole Ghazalpour, Sudheer Doss, Bin Zhang, et al.Susanna Wang, Christopher Plaisier, Ruth Castellanos, Alec Brozell, Eric E. Schadt, Thomas A. Drake, Aldons J. Lusis, Steve Horvath posted to association expression metabolic modules network by koller on 2006-09-06 22:43:52 as along with 11 people and 1 group biomcgary Scis0000002 cswinburne druvus semrich Maelys kengg giovanni jeremymiller natstreet jo_davies GeschwindLab
	The amino-acid mutational spectrum of human genetic disease. [My Copy] Genome Biol, Vol. 4, No. 11. (2003) by D. Vitkup, C. Sander, G. M. Church posted to association phenotype regulatory sequence_motif by koller on 2006-08-31 07:31:38 as along with 2 people and 1 group ramensky cat_worth structural_bioinformatics
	Identifying metabolic enzymes with multiple types of association evidence. [My Copy] BMC Bioinformatics, Vol. 7 (2006) by P. Kharchenko, L. Chen, Y. Freund, D. Vitkup, G. M. Church posted to reconstruction metabolic network by koller on 2006-08-31 07:24:15 as along with 2 people JeremyZucker shung
	A global view of pleiotropy and phenotypically derived gene function in yeast [My Copy] Mol Syst Biol, Vol. 1, No. 1. (29 March 2005), pp. msb4100004-E1-msb4100004-E11. by Aimee M. Dudley, Daniel M. Janse, Amos Tanay, Ron Shamir, George M. Church posted to modules phenotype reconstruction by koller on 2006-08-31 07:22:05 as along with 9 people nicholasflann dbensasson michaelbarton chihchun_chen balajis balicea i41m nirfriedman jiny
	Expression dynamics of a cellular metabolic network [My Copy] Molecular Systems Biology, Vol. 1, No. 1. (02 August 2005), pp. msb4100023-E1-msb4100023-E6. by Peter Kharchenko, George M. Church, Dennis Vitkup posted to expression metabolic network regulatory transcription by koller on 2006-08-31 07:20:34 as along with 4 people pcahan1 JeremyZucker gespim jpoyatos
	Identifying regulatory networks by combinatorial analysis of promoter elements [My Copy] Nature Genetics, Vol. 29, No. 2. (10 September 2001), pp. 153-159. by Yitzhak Pilpel, Priya Sudarsanam, George M. Church posted to cis-regulation expression modules sequence_motif by koller on 2006-08-31 07:10:12 as along with 8 people and 1 group ipark-kaist farhat imouthesmp troels_marstrand xwbcn wnpx noano windman83 Bioinformatics
	Motifs, themes and thematic maps of an integrated Saccharomyces cerevisiae interaction network [My Copy] Journal of Biology, Vol. 4, No. 2. (2005), 6. by Lan Zhang, Oliver King, Sharyl Wong, et al.Debra Goldberg, Amy Tong, Guillaume Lesage, Brenda Andrews, Howard Bussey, Charles Boone, Frederick Roth posted to expression genetic-inter network network_motif p2p transcription by koller on 2006-08-31 06:58:25 as along with 11 people and 1 group colmryan lfriedl marcora jjray ssb benny nirfriedman iris_2001 gwcarter carlk ksiek kdl

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network	95
regulatory	59
reconstruction	42
p2p	41
evolution	23
transcription	23
metabolic	22
cis-regulation	21
network_motif	21
sequence_motif	16
expression	15
phenotype	15
chip2	13
modules	13
review	11
genetic-inter	10
association	9
bayesian	9
signaling	7
networks	6
dynamic	5
resource	5
chromatin	4
regulation	3
biochemical	2
complex	2
noise	2
rna	2
bacteria	1
comparison	1
crm	1
dna-repair	1
localization	1
phylogenetic	1
protein	1

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