kshameer's library 215 articles Export

	Network analysis of the transcriptional pattern of young and old cells of Escherichia coli during lag phase [My Copy] BMC Systems Biology, Vol. 3, No. 1. (2009), 108. by Carmen Pin, Matthew Rolfe, Marina M. Cuevas, et al.Jay Hinton, Michael Peck, Nicholas Walton, Jozsef Baranyi posted to transcription_profiling by kshameer on 2009-11-20 08:26:21 as
	SitesIdentify: a protein functional site prediction tool [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 379. by Tracey Bray, Pedro Chan, Salim Bougouffa, Richard Greaves, Andrew Doig, Jim Warwicker posted to structure-analysis prediction_tool prediction_methods by kshameer on 2009-11-20 08:18:54 as along with 1 person and 1 group renatomilani structural_bioinformatics
	DASMiner: discovering and integrating data from DAS sources [My Copy] BMC Systems Biology, Vol. 3, No. 1. (2009), 109. by Diogo Veiga, Helena Deus, Caner Akdemir, Ana T. Vasconcelos, Jonas Almeida posted to database data-integration data das annotation by kshameer on 2009-11-20 08:18:05 as along with 1 person and 1 group cisevol BergmanLab
	The ontology of biological sequences [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 377. by Robert Hoehndorf, Janet Kelso, Heinrich Herre posted to sequence-analysis sequence ontology by kshameer on 2009-11-20 07:03:55 as along with 4 people and 1 group mjbell allysonlister barriot dullhunk Journal picks
	ncRNAppi - A tool for identifying disease-related miRNA and siR-NA targeting pathways. [My Copy] Bioinformatics (Oxford, England), Vol. 25, No. 23. (6 October 2009), pp. 3199-3201. by Ka-Lok L. Ng, Hsueh-Chuan C. Liu, Shan-Chih C. Lee posted to rna mirna database data-integration data by kshameer on 2009-11-18 04:07:09 as along with 3 people renatomilani daforerog frohike
	Integration of heterogeneous expression data sets extends the role of the retinol pathway in diabetes and insulin resistance [My Copy] Bioinformatics, Vol. 25, No. 23. (1 December 2009), pp. 3121-3127. by Peter J. Park, Sek W. Kong, Toma Tebaldi, Weil R. Lai, Simon Kasif, Isaac S. Kohane posted to microarray gene_expression data-mining data-integration by kshameer on 2009-11-18 04:06:13 as along with 3 people ptrobajo rdiaz thomaskelder
	The interwinding nature of protein-protein interfaces and its implication for protein complex formation [My Copy] Bioinformatics, Vol. 25, No. 23. (1 December 2009), pp. 3108-3113. by Kei Yura, Steven Hayward posted to protein-protein-interaction protein-interface by kshameer on 2009-11-18 04:05:28 as along with 4 people dfdong higueruelo tprpip phoenixzxl
	Detection of new protein domains using co-occurrence: application to Plasmodium falciparum [My Copy] Bioinformatics, Vol. 25, No. 23. (1 December 2009), pp. 3077-3083. by Nicolas Terrapon, Olivier Gascuel, Eric Marechal, Laurent Breehelin posted to prediction_methods infectious_disease domain_identification domain by kshameer on 2009-11-18 04:04:02 as along with 1 person and 1 group ppgardne Journal picks
	HHsvm: fast and accurate classification of profile-profile matches identified by HHsearch [My Copy] Bioinformatics, Vol. 25, No. 23. (1 December 2009), pp. 3071-3076. by Mensur Dlakic posted to svm pssm machine-learning by kshameer on 2009-11-18 04:03:18 as along with 1 person and 1 group ppgardne Journal picks
	Lost in translation: an assessment and perspective for computational microRNA target identification [My Copy] Bioinformatics, Vol. 25, No. 23. (1 December 2009), pp. 3049-3055. by Panagiotis Alexiou, Manolis Maragkakis, Giorgos L. Papadopoulos, Martin Reczko, Artemis G. Hatzigeorgiou posted to review prediction_methods mirna by kshameer on 2009-11-18 04:02:55 as along with 11 people and 1 group pattersonee Jporci heliopais kintoki dswan dandaman lwaldron toni_marco frohike lp2 daforerog Journal picks
	Service-based analysis of biological pathways [My Copy] BMC Bioinformatics, Vol. 10, No. Suppl 10. (2009), S6. by George Zheng, Athman Bouguettaya posted to webservices pathway_analysis pathway database data-mining data-integration data by kshameer on 2009-11-16 17:00:35 as along with 2 people neils druvus
	Taverna: a tool for the composition and enactment of bioinformatics workflows. [My Copy] Bioinformatics (Oxford, England), Vol. 20, No. 17. (22 November 2004), pp. 3045-3054. by Tom Oinn, Matthew Addis, Justin Ferris, et al.Darren Marvin, Martin Senger, Mark Greenwood, Tim Carver, Kevin Glover, Matthew R. Pocock, Anil Wipat, Peter Li posted to workflows web-services data-mining data-integration data by kshameer on 2009-11-16 16:58:45 as along with 23 people and 1 group isimpson mtaschuk djohnson egonw pekrau gquigley thegoose2 tjtaylor shikin oeli4321 zufar niallhaslam druvus irenas guhjy moborg wnpx dullhunk fisherp marpin nicklynch tharris alanrw dbk-lab
	Using RSAT to scan genome sequences for transcription factor binding sites and cis-regulatory modules. [My Copy] Nature protocols, Vol. 3, No. 10. (18 September 2008), pp. 1578-1588. by Jean-Valery V. Turatsinze, Morgane Thomas-Chollier, Matthieu Defrance, Jacques van Helden posted to transcription_factor_binding_sites transcription_factor prediction_methods cis-regulation by kshameer on 2009-11-16 16:58:15 as along with 7 people and 1 group isimpson heliopais druvus fhsantanna polivares idonaldson natstreet BergmanLab
	OpenFlyData: The Way to Go for Biological Data Integration [My Copy] Data Integration in the Life Sciences (2009), pp. 47-54. by Jun Zhao, Alistair Miles, Graham Klyne, David Shotton posted to integration database data by kshameer on 2009-11-16 12:02:16 as along with 3 people brembs gthorisson dullhunk
	Pathway knowledge base: An integrated pathway resource using BioPAX [My Copy] Applied Ontology, Vol. 3, No. 4. (1 January 2008), pp. 235-245. by Nikesh Kotecha, Kyle Bruck, William Lu, Nigam Shah posted to rdf pathway_analysis pathway integration database data by kshameer on 2009-11-16 12:01:12 as along with 2 people fgibson allysonlister
	Identification of substrates for Ser/Thr kinases using residue based statistical pair potentials [My Copy] Bioinformatics (12 November 2009), btp633. by Narendra Kumar, Debasisa Mohanty posted to prediction_methods algorithm by kshameer on 2009-11-14 16:35:31 as along with 1 person neils
	Co-expression Networks: Graph Properties and Topological Comparisons [My Copy] Bioinformatics (12 November 2009), btp632. by Ramon Xulvi-Brunet, Hongzhe Li posted to network_analysis network by kshameer on 2009-11-14 16:34:58 as along with 2 people neils phoenixzxl
	MicrobesOnline: an integrated portal for comparative and functional genomics. [My Copy] Nucleic acids research (11 November 2009) by Paramvir S. Dehal, Marcin P. Joachimiak, Morgan N. Price, et al.John T. Bates, Jason K. Baumohl, Dylan Chivian, Greg D. Friedland, Katherine H. Huang, Keith Keller, Pavel S. Novichkov, Inna L. Dubchak, Eric J. Alm, Adam P. Arkin posted to integration functional_genomics database data-mining data comparative_genomics by kshameer on 2009-11-14 16:34:45 as along with 1 person neils
	Prediction of hot spot residues at protein-protein interfaces by combining machine learning and energy-based methods [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (30 October 2009), 365. by Stefano Lise, Cedric Archambeau, Massimiliano Pontil, David Jones posted to svm protein-protein-interaction machine-learning by kshameer on 2009-11-06 08:43:08 as along with 6 people and 1 group sillitoe apaydin zwang phoenixzxl higueruelo neils Orengo Group Journal Picks
	GLIDERS - A web-based search engine for genome-wide linkage disequilibrium between HapMap SNPs [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 367. by Robert Lawrence, Aaron D. Williams, Richard Mott, John Broxholme, Lon Cardon, Eleftheria Zeggini posted to web-server snp hapmap genome-analysis by kshameer on 2009-11-06 08:42:09 as along with 1 person daforerog
	DASMI: exchanging, annotating and assessing molecular interaction data [My Copy] Bioinformatics, Vol. 25, No. 10. (15 May 2009), pp. 1321-1328. by Hagen Blankenburg, Robert D. Finn, Andreas Prlic, et al.Andrew M. Jenkinson, Fidel Ramirez, Dorothea Emig, Sven-Eric Schelhorn, Joachim Buch, Thomas Lengauer, Mario Albrecht posted to protein-protein-interaction database data_exchange data-integration data annotation by kshameer on 2009-11-04 12:14:30 as along with 3 people guhjy beapen grahamc
	Structure of Protein Interaction Networks and Their Implications on Drug Design [My Copy] PLoS Comput Biol, Vol. 5, No. 10. (30 October 2009), e1000550. by Takeshi Hase, Hiroshi Tanaka, Yasuhiro Suzuki, So Nakagawa, Hiroaki Kitano posted to protein-protein-interaction pin network_analysis drug-discovery drug-designing by kshameer on 2009-11-03 16:34:13 as along with 9 people and 1 group kiekyon nickolay zwang phoenixzxl venancio CorinYeats ess30 poirel jbesnard Orengo Group Journal Picks
	Head in the clouds: Re-imagining the experimental laboratory record for the web-based networked world [My Copy] Automated Experimentation, Vol. 1, No. 1. (2009), 3. by Cameron Neylon posted to cloud_computing by kshameer on 2009-11-03 16:03:28 as along with 10 people and 2 groups allysonlister pedromts CameronNeylon druvus neils jobadge niallhaslam dullhunk joaocarrico AJCann Science 2.0 / Open Science eLearning in Leicester
	mGene: accurate SVM-based gene finding with an application to nematode genomes. [My Copy] Genome research, Vol. 19, No. 11. (29 November 2009), pp. 2133-2143. by Gabriele Schweikert, Alexander Zien, Georg Zeller, et al.Jonas Behr, Christoph Dieterich, Cheng Soon S. Ong, Petra Philips, Fabio De Bona, Lisa Hartmann, Anja Bohlen, Nina Krüger, Sören Sonnenburg, Gunnar Rätsch posted to svm machine-learning genome-analysis gene-finding by kshameer on 2009-11-03 08:10:04 as along with 4 people rshe dakelley natstreet farhat
	Clustering of protein domains for functional and evolutionary studies. [My Copy] BMC bioinformatics, Vol. 10, No. 1. (2009), 335. by Pavle Goldstein, Jurica Zucko, Dusica Vujaklija, et al.Anita Krisko, Daslav Hranueli, Paul F. Long, Catherine Etchebest, Bojan Basrak, John Cullum posted to evolution domain clustering analysis by kshameer on 2009-11-01 08:09:41 as along with 5 people and 2 groups sillitoe druvus ppgardne zwang phoenixzxl Orengo Group Journal Picks Journal picks
	Endocytosis of glycosylphosphatidylinositol-anchored proteins [My Copy] Journal of Biomedical Science, Vol. 16, No. 1. (2009), 93. by Shaheen Lakhan, Shefali Sabharanjak, Ananya De posted to review endocytosis by kshameer on 2009-11-01 08:09:00 as along with 1 person josephjose
	The Application of Genomics to Emerging Zoonotic Viral Diseases [My Copy] PLoS Pathog, Vol. 5, No. 10. (26 October 2009), e1000557. by Bart L. Haagmans, Arno C. Andeweg, Albert D. M. E. Osterhaus posted to viral_diseases infectious_disease genomics by kshameer on 2009-11-01 08:07:01 as
	Helicobacter pylori's Unconventional Role in Health and Disease [My Copy] PLoS Pathog, Vol. 5, No. 10. (26 October 2009), e1000544. by Marion S. Dorer, Sarah Talarico, Nina R. Salama posted to infectious_disease helicobacter_pylori genomics by kshameer on 2009-11-01 08:06:32 as
	Comparative Transcriptional and Genomic Analysis of Plasmodium falciparum Field Isolates [My Copy] PLoS Pathog, Vol. 5, No. 10. (30 October 2009), e1000644. by Margaret J. Mackinnon, Jinguang Li, Sachel Mok, et al.Moses M. Kortok, Kevin Marsh, Peter R. Preiser, Zbynek Bozdech posted to transcription_profiling infectious_disease genome-analysis comparative_genomics by kshameer on 2009-10-31 08:34:07 as along with 1 person GeeSharpMinor
	Advances in parasite genomics: from sequences to regulatory networks. [My Copy] PLoS pathogens, Vol. 5, No. 10. (30 October 2009), e1000649. by Elizabeth A. Winzeler posted to sequence-analysis review regulatory_networks infectious_disease genomics genome-analysis by kshameer on 2009-10-31 08:33:15 as
	Computational Resources in Infectious Disease: Limitations and Challenges [My Copy] PLoS Comput Biol, Vol. 5, No. 10. (26 October 2009), e1000481. by Eva C. Berglund, Björn Nystedt, Siv G. E. Andersson posted to infectious_disease database data-mining data-integration data by kshameer on 2009-10-31 07:41:37 as along with 3 people remoteFuture neils druvus
	Discovering the Phylodynamics of RNA Viruses [My Copy] PLoS Comput Biol, Vol. 5, No. 10. (26 October 2009), e1000505. by Edward C. Holmes, Bryan T. Grenfell posted to phylogeny evolution epidemology by kshameer on 2009-10-31 07:41:20 as along with 1 person friendpine
	A Model of Cardiovascular Disease Giving a Plausible Mechanism for the Effect of Fractionated Low-Dose Ionizing Radiation Exposure [My Copy] PLoS Comput Biol, Vol. 5, No. 10. (23 October 2009), e1000539. by Mark P. Little, Anna Gola, Ioanna Tzoulaki posted to modelling coronary_heart_disease atherosclerosis by kshameer on 2009-10-31 07:39:41 as
	phyloXML: XML for evolutionary biology and comparative genomics [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 356. by Mira Han, Christian Zmasek posted to xml_language phylogeny by kshameer on 2009-10-30 06:52:59 as along with 6 people and 1 group operon cisevol Geknitics druvus phoenixzxl cmzmasek BergmanLab
	Construction of an annotated corpus to support biomedical information extraction [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (23 October 2009), 349. by Paul Thompson, Syed Iqbal, John McNaught, Sophia Ananiadou posted to text-mining semantic data-mining data-integration by kshameer on 2009-10-30 06:52:26 as along with 3 people and 3 groups henk-cul cisevol Effie dbmi-nlp BergmanLab NaCTeM
	GIFtS: annotation landscape analysis with GeneCards [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 348. by Arye Harel, Aron Inger, Gil Stelzer, et al.Liora S. Almashanu, Irina Dalah, Marilyn Safran, Doron Lancet posted to human_genome database data-integration data annotation analysis by kshameer on 2009-10-30 06:51:14 as
	Biological Ontologies [My Copy] Semantic Web (2007), pp. 85-99. by Patrick Lambrix, He Tan, Vaida Jakoniene, Lena Strömbäck posted to ontology by kshameer on 2009-10-29 12:21:11 as along with 1 person operon
	How To Choose a Good Scientific Problem [My Copy] Molecular Cell, Vol. 35, No. 6. (24 September 2009), pp. 726-728. by Uri Alon posted to opinion by kshameer on 2009-10-29 12:20:14 as along with 123 people and 6 groups cefa gvdh penneyft welliegirl bertelsen thegoose xawen chriswillmott nellapower ishiken andreff claudiushauptmann cermak bmoores karthikraman applebyb mordiano Gorzomagnificent Horduna ajaymalik mmwoodman dbikard toszko mthomure timflutre cyounkin marsl0am jmzhuo dmorti renatomilani ibre kevinemamy Sergey_gerbek huberse ddbb12 seneca mattbiehl mmborges GeeSharpMinor jjjpppfff zhangfh andreacapocci melo_mcr aaltenburger iannis jichok josephjose TorstenWaldminghaus rudalert kvalyi duel_jetty allaves rabit fercosber hax123 iskanbasal livingthingdan poojamaj gonzalez amynmoore ramalldf pvdg sfalsharif dill2009 singhsh rogermug aha jarekadam Jansen04 cgravlee lkakinami anuragsethi flips robfree kaliczp yyfwuhan luciensamary elsantosneto mgaldino daveGerrard sandfire tnhh lesandrop munzmarci pdpcosta mxro wangngu myriasofo OliverHarriman AnthonySoprano robertlischke R_C_Cordeiro daforerog operon nandipati wenhaosparty jeffcrow leocmcheung fgibson snakehsu cisevol michaelbarton dna dullhunk danilov m_lew abellogin cxshang grahamc SantoshKalwar Xusheng leonardo roys benoitvalley zchen75 darshan druvus Asclepius Zephyrus songpku aalibes flieder pedromts Brain-like research group UWA Science Communication milab@yzu Information Integration Architecture BergmanLab Roswell Cancer Crosstalk
	An introduction to scripting in Ruby for biologists. [My Copy] BMC bioinformatics, Vol. 10, No. 1. (2009), 221. by Jan Aerts, Andy Law posted to ruby_programming by kshameer on 2009-10-29 12:20:03 as along with 25 people and 3 groups isimpson n00c Zephyrus nuin sobolevnrm jago lwaldron apaydin natstreet Stew silberbauer mfenner phoenixzxl renatomilani abhishek_tiwari rschulz sjcockell dullhunk druvus neils daforerog fgibson leemond31 brianb dswan Bioinformatics - CRUK Journal picks Bioinformatics
	Analysis and comparison of very large metagenomes with fast clustering and functional annotation [My Copy] BMC Bioinformatics, Vol. 10, No. 1. (2009), 359. by Weizhong Li posted to metagenomics metagenomic_data_analysis clustering_algorithm clustering annotation analysis by kshameer on 2009-10-29 07:06:14 as along with 5 people and 2 groups idoerg sillitoe ramonvidal ppgardne neils Orengo Group Journal Picks Journal picks
	The completion of the Mammalian Gene Collection (MGC). [My Copy] Genome research (28 October 2009) by The MGC Project Team, Gary Temple, Daniela S. Gerhard, et al.Rebekah Rasooly, Elise A. Feingold, Peter J. Good, Cristen Robinson, Allison Mandich, Jeffrey G. Derge, Jeanne Lewis, Debonny Shoaf, Francis S. Collins, Wonhee Jang, Lukas Wagner, Carolyn M. Shenmen, Leonie Misquitta, Carl F. Schaefer, Kenneth H. Buetow, Tom I. Bonner, Linda Yankie, Ming Ward, Lon Phan, Alex Astashyn, Garth Brown, Catherine Farrell, Jennifer Hart, Melissa Landrum, Bonnie L. Maidak, Michael Murphy, Terence Murphy, Bhanu Rajput, Lillian Riddick, David Webb, Janet Weber, Wendy Wu, Kim D. Pruitt, Donna Maglott, Adam Siepel, Brona Brejova, Mark Diekhans, Rachel Harte, Robert Baertsch, Jim Kent, David Haussler, Michael Brent, Laura Langton, Charles L. Comstock, Michael Stevens, Chaochun Wei, Marijke J. van Baren, Kourosh Salehi-Ashtiani, Ryan R. Murray, Lila Ghamsari, Elizabeth Mello, Chenwei Lin, Christa Pennacchio, Kirsten Schreiber, Nicole Shapiro, Amber Marsh, Elizabeth Pardes, Troy Moore, Anita Lebeau, Mike Muratet, Blake Simmons, David Kloske, Stephanie Sieja, James Hudson, Praveen Sethupathy, Michael Brownstein, Narayan Bhat, Joseph Lazar, Howard Jacob, Chris E. Gruber, Mark R. Smith, John McPherson, Angela M. Garcia, Preethi H. Gunaratne, Jiaqian Wu, Donna Muzny, Richard A. Gibbs, Alice C. Young, Gerard G. Bouffard, Robert W. Blakesley, Jim Mullikin, Eric D. Green, Mark C. Dickson, Alex C. Rodriguez, Jane Grimwood, Jeremy Schmutz, Richard M. Myers, Martin Hirst, Thomas Zeng, Kane Tse, Michelle Moksa, Merinda Deng, Kevin Ma, Diana Mah, Johnson Pang, Greg Taylor, Eric Chuah, Athena Deng, Keith Fichter, Anne Go, Stephanie Lee, Jing Wang, Malachi Griffith, Ryan Morin, Richard A. Moore, Michael Mayo, Sarah Munro, Susan Wagner, Steven J. Jones, Robert A. Holt, Marco A. Marra, Sun Lu, Shuwei Yang, James Hartigan, Marcus Graf, Ralf Wagner, Stanley Letovksy, Jacqueline C. Pulido, Keith Robison, Dominic Esposito, James Hartley, Vanessa E. Wall, Ralph F. Hopkins, Osamu Ohara, Stefan Wiemann posted to eukaryotes database data-integration by kshameer on 2009-10-29 06:57:34 as along with 4 people and 1 group qayub GeeSharpMinor heliopais owhitney Journal picks
	Genome-wide mapping of alternative splicing in Arabidopsis thaliana [My Copy] Genome Research (26 October 2009) by Sergei A. Filichkin, Henry D. Priest, Scott A. Givan, et al.Rongkun Shen, Douglas W. Bryant, Samuel E. Fox, Weng-Keen Wong, Todd C. Mockler posted to plant genome-wide-survey genome-analysis arabidopsis by kshameer on 2009-10-29 06:57:08 as along with 4 people cajunsushi bpcusack GeeSharpMinor natstreet
	Comparative genomics of the fungal pathogens Candida dubliniensis and Candida albicans [My Copy] Genome Research (10 September 2009) by Andrew P. Jackson, John A. Gamble, Tim Yeomans, et al.Gary P. Moran, David Saunders, David Harris, Martin Aslett, Jamie F. Barrell, Geraldine Butler, Francesco Citiulo, David C. Coleman, Piet W. J. de Groot, Tim J. Goodwin, Michael A. Quail, Jacqueline McQuillan, Carol A. Munro, Arnab Pain, Russell T. Poulter, Marie-AdÃ¨le Rajandream, Hubert Renauld, Martin J. Spiering, Adrian Tivey, Neil A. R. Gow, Barclay Barrell, Derek J. Sullivan, Matthew Berriman posted to genome-analysis genome comparative_genomics by kshameer on 2009-10-29 06:56:40 as along with 2 people and 1 group venancio stajich Mycology
	Annotation Confidence Score for Genome Annotation: A Genome Comparison Approach. [My Copy] Bioinformatics (Oxford, England) (24 October 2009), btp613. by Youngik Yang, Donald Gilbert, Sun Kim posted to genome-analysis genome annotation by kshameer on 2009-10-28 07:52:57 as along with 4 people ramonvidal operon kevinzheng1983 druvus
	Identification of functionally related genes using data mining and data integration: a breast cancer case study. [My Copy] BMC bioinformatics, Vol. 10 Suppl 12, No. Suppl 12. (2009), S8. by Ettore Mosca, Gloria Bertoli, Eleonora Piscitelli, et al.Laura Vilardo, Rolland A. Reinbold, Ileana Zucchi, Luciano Milanesi posted to data-mining data-integration cancer by kshameer on 2009-10-28 07:52:40 as along with 1 person and 1 group sillitoe Orengo Group Journal Picks
	Genetical genomic determinants of alcohol consumption in rats and humans [My Copy] BMC Biology, Vol. 7, No. 1. (2009), 70. by Boris Tabakoff, Laura Saba, Morton Printz, et al.Pam Flodman, Colin Hodgkinson, David Goldman, George Koob, Heather Richardson, Katerina Kechris, Richard Bell, Norbert Hubner, Matthias Heinig, Michal Pravenec, Jonathan Mangion, Lucie Legault, Maurice Dongier, Katherine Conigrave, John Whitfield, John Saunders, Bridget Grant, Paula Hoffman, On State, WHO/ISBRA Study Trait Markers of Alcoholism posted to single_nucleotide_polymorphisms genome-analysis by kshameer on 2009-10-27 10:10:21 as
	Human genomes as email attachments [My Copy] Bioinformatics, Vol. 25, No. 2. (15 January 2009), pp. 274-275. by Scott Christley, Yiming Lu, Chen Li, Xiaohui Xie posted to genome data by kshameer on 2009-10-25 10:56:18 as along with 25 people and 3 groups hzoltan idonaldson operon guhjy druvus n00c dnewburger djkt mmartin sobolevnrm jfr psique cisevol GeeSharpMinor neils dswan dullhunk siebert hpiwowar nuin cthachuk rschulz treangen renatomilani jmeppley baker-group BergmanLab Bioinformatics
	G-compass: A web-based comparative genome browser between human and other vertebrate genomes [My Copy] Bioinformatics (21 October 2009), btp594. by Yoshihiro Kawahara, Ryuichi Sakate, Akihiro Matsuya, et al.Katsuhiko Murakami, Yoshiharu Sato, Hao Zhang, Takashi Gojobori, Takeshi Itoh, Tadashi Imanishi posted to genome-browser genome-analysis annotation by kshameer on 2009-10-25 10:55:18 as along with 4 people idonaldson operon neils druvus
	Fine-grained annotation and classification of de novo predicted LTR retrotransposons [My Copy] Nucl. Acids Res. (28 September 2009), gkp759. by Sascha Steinbiss, Ute Willhoeft, Gordon Gremme, Stefan Kurtz posted to transposable_elements genome-analysis annotation by kshameer on 2009-10-25 10:06:09 as along with 1 person operon
	Exploratory visual analysis of conserved domains on multiple sequence alignments. [My Copy] BMC bioinformatics, Vol. 10 Suppl 11, No. Suppl 11. (2009), S7. by T. J. Jankun-Kelly, Andrew D. Lindeman, Susan M. Bridges posted to multiple_sequence_alignment database data-integration annotation by kshameer on 2009-10-25 08:22:05 as along with 2 people and 1 group sillitoe operon Orengo Group Journal Picks

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data-mining	44
data-integration	41
database	30
genome-analysis	20
analysis	17
annotation	17
protein-protein-interaction	17
data	16
bioinformatics	12
machine-learning	12
network	12
gene-ontology	9
structure	9
web-server	9
bmc	8
drug-designing	8
drug-discovery	8
review	8
semantic	8
structure-analysis	8
algorithm	7
domain	7
drug-target	7
genome	7
protein	7
protein-structure	7
svm	7
infectious_disease	6
pathway	6
text-mining	6
interaction	5
network_analysis	5
phylogeny	5
prediction_methods	5
r	5
transcription_profiling	5
evolution	4
integration	4
metagenomics	4
ontology	4
opinion	4
ortholog	4
paralogs	4
rnai	4
sequence	4
webservices	4
cancer	3
clustering	3
comparative_genomics	3
docking	3
function	3
genome-browser	3
genomics	3
knowledge-mining	3
microarray	3
mirna	3
next-generation-sequencing	3
pathway_analysis	3
plant	3
protein-peptide	3
protein-protein	3
rdf	3
rna	3
web-services	3
alignment	2
biomart	2
career	2
cis-regulation	2
curation	2
eukaryotes	2
gene-finding	2
genome-wide-survey	2
go	2
gwas	2
kegg	2
nextgenerationsequencing	2
pfam	2
programming	2
protein-interface	2
pssm	2
python	2
sequence-analysis	2
software	2
standard	2
statistics	2
transcription_factor	2
visualization	2
workflows	2
ajax	1
arabidopsis	1
atherosclerosis	1
best	1
best-practices	1
binding-site	1
biological_process	1
cloud_computing	1
clustering_algorithm	1
comparative-genomics	1
comparison	1
coronary_heart_disease	1
cran	1
das	1
data_exchange	1
domain-domain	1
domain_identification	1
endocytosis	1
epidemology	1
fba	1
functional_genomics	1
gene_expression	1
hapmap	1
helicobacter_pylori	1
hmm	1
homology	1
host-pathogen	1
human_genome	1
hypothetical_protein	1
interactome	1
ismb	1
jscript	1
metagenomic_data_analysis	1
methods	1
microformats	1
mining	1
modelling	1
multiple_sequence_alignment	1
net	1
normalization	1
owl	1
pathogen	1
pdz	1
peptides	1
phmm	1
pin	1
practices	1
prediction_tool	1
project-management	1
protein_families	1
protein_sequences	1
regulatory_networks	1
ruby_programming	1
scripting	1
signalling	1
simulation	1
single_nucleotide_polymorphisms	1
snp	1
structure_alignment	1
swapping	1
systems-biology	1
transcription_factor_binding_sites	1
transposable_elements	1
viral_diseases	1
web20	1
xml_language	1

kshameer's library 215 articles Export

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