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DOOSS: a tool for visual analysis of data overlaid on secondary structures

by: Michael Golden, Darren Martin
Bioinformatics, Vol. 29, No. 2. (15 January 2013), pp. 271-272, doi:10.1093/bioinformatics/bts667  Key: citeulike:11778223

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Abstract

Motivation: DOOSS (Data Overlaid On Secondary Structures) is a tool for visualizing annotated secondary structures of large single-stranded nucleotide sequences (such as full-length virus genomes). The purpose of this tool is to assist investigators in evaluating the biological relevance of secondary structures within particular sequences.Availability and implementation: DOOSS is written in Java and is available from: http://dooss.computingforbiology.orgContact: michaelgolden0@gmail.comSupplementary information: Supplementary data are available at Bioinformatics online.


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