kuhn's similarity [27 articles] Export

Recent papers added to kuhn's library classified by the tag similarity. You can also see everyone's similarity.

	Analysis of System Structure-Function Relationships [My Copy] ChemMedChem, Vol. 2, No. 12. (2007), pp. 1774-1782. by Anton F. Fliri, William T. Loging, Robert A. Volkmann posted to activity_profile biospectra side_effects similarity by kuhn on 2008-01-18 13:21:14 as
	Bridging chemical and biological space: "target fishing" using 2D and 3D molecular descriptors. [My Copy] J Med Chem, Vol. 49, No. 23. (16 November 2006), pp. 6802-6810. by J. H. Nettles, J. L. Jenkins, A. Bender, Z. Deng, J. W. Davies, M. Glick posted to chemical similarity structure by kuhn on 2007-10-23 14:49:33 as along with 1 person tjimenez
	Chemical similarity searching [My Copy] JOURNAL OF CHEMICAL INFORMATION AND COMPUTER SCIENCES, Vol. 38, No. 6. (1998), pp. 983-996. by P. Willett, J. M. Barnard, G. M. Downs posted to chemical similarity by kuhn on 2007-09-12 13:46:00 as along with 1 person jerome
	Recent developments of the chemistry development kit (CDK) - an open-source java library for chemo- and bioinformatics. [My Copy] Current pharmaceutical design, Vol. 12, No. 17. (2006), pp. 2111-2120. by C. Steinbeck, C. Hoppe, S. Kuhn, M. Floris, R. Guha, E. L. Willighagen posted to chemical similarity tool by kuhn on 2007-08-07 15:27:05 as along with 3 people flbarroso egonw noby
	The relationship between the sequence identities of alpha helical proteins in the PDB and the molecular similarities of their ligands. [My Copy] J Chem Inf Comput Sci, Vol. 41, No. 6. (c 2001), pp. 1617-1622. by J. B. Mitchell posted to chemical pdb protein similarity structure by kuhn on 2007-06-06 13:44:13 as
	Mathematical Correction for Fingerprint Similarity Measures to Improve Chemical Retrieval. [My Copy] J Chem Inf Model (20 April 2007) by S J. Swamidass, Pierre Baldi posted to chemical error similarity by kuhn on 2007-05-03 13:52:08 as along with 3 people pablocarb baldigroup dullhunk
	Relating protein pharmacology by ligand chemistry [My Copy] Nat Biotech, Vol. 25, No. 2. (07 February 2007), pp. 197-206. by Michael J. Keiser, Bryan L. Roth, Blaine N. Armbruster, Paul Ernsberger, John J. Irwin, Brian K. Shoichet posted to drug drugdiscovery p prediction similarity by kuhn on 2007-02-16 14:15:57 as along with 9 people pablocarb mnishimu ucbcjbm Yanno tjimenez daevans massivemayhem dgront jerome_ucsf_slb
	Enzyme classification by ligand binding. [My Copy] Proteins, Vol. 57, No. 4. (1 December 2004), pp. 711-724. by S. Izrailev, M. A. Farnum posted to chemical enzyme function similarity structure by kuhn on 2006-09-22 15:32:05 as along with 1 person BragilMassoud
	How Well is Enzyme Function Conserved as a Function of Pairwise Sequence Identity? [My Copy] Journal of Molecular Biology, Vol. 333, No. 4. (31 October 2003), pp. 863-882. by Weidong Tian, Jeffrey Skolnick posted to enzyme evolution function similarity by kuhn on 2006-09-22 15:14:36 as
	Evolution of enzyme superfamilies. [My Copy] Current opinion in chemical biology In Analytical techniques / Mechanisms, Vol. 10, No. 5. (October 2006), pp. 492-497. by Margaret E. Glasner, John A. Gerlt, Patricia C. Babbitt posted to enzyme evolution p review similarity by kuhn on 2006-09-22 10:33:35 as along with 7 people and 1 group pablocarb NickFurnham yuslinaz tny robert caporaso ucbcjbm biomedical-nlp
	Molecular similarity and diversity in chemoinformatics: From theory to applications [My Copy] Molecular Diversity, Vol. 10, No. 1. (1 February 2006), pp. 39-79. by A. T. Maldonado, J. P. Doucet, M. Petitjean, B. T. Fan posted to chemical review similarity by kuhn on 2006-09-06 09:15:14 as along with 2 people kaliif usr
	Do structurally similar molecules have similar biological activity? [My Copy] J Med Chem, Vol. 45, No. 19. (12 September 2002), pp. 4350-4358. by Y. C. Martin, J. L. Kofron, L. M. Traphagen posted to activity_profile chemical p similarity by kuhn on 2006-09-06 08:08:57 as along with 2 people and 2 groups reyez sangeetha Bioinformatics insilicodrug
	Graph kernels for chemical informatics [My Copy] Neural Networks, Vol. 18, No. 8. (October 2005), pp. 1093-1110. by L. Ralaivola, S. Swamidass, H. Saigo, P. Baldi posted to bioassay chemical machine_learning similarity by kuhn on 2006-08-15 10:45:16 as along with 2 people badi baldigroup
	Evaluating chemical structure similarity as an indicator of cellular growth inhibition. [My Copy] J Chem Inf Model, Vol. 46, No. 1. (b 2006), pp. 430-437. by A. Wallqvist, R. Huang, N. Thanki, D. G. Covell posted to cancer chemical p similarity by kuhn on 2006-06-28 12:17:07 as
	Similarity and Dissimilarity Methods for Processing Chemical Structure Databases [My Copy] The Computer Journal, Vol. 41, No. 8. (1 August 1998), pp. 547-558. by V. J. Gillet, D. J. Wild, P. Willett, J. Bradshaw posted to chemical similarity by kuhn on 2006-06-28 08:29:15 as
	Similarity-based approaches to virtual screening. [My Copy] Biochem Soc Trans, Vol. 31, No. Pt 3. (June 2003), pp. 603-606. by P. Willett posted to chemical similarity by kuhn on 2006-06-28 08:27:12 as along with 3 people mijam reyez jerome
	A Pharmacological Map of the PI3-K Family Defines a Role for p110alpha in Insulin Signaling. [My Copy] Cell, Vol. 125, No. 4. (19 May 2006), pp. 733-747. by Z. A. Knight, B. Gonzalez, M. E. Feldman, et al.E. R. Zunder, D. D. Goldenberg, O. Williams, R. Loewith, D. Stokoe, A. Balla, B. Toth, T. Balla, W. A. Weiss, R. L. Williams, K. M. Shokat posted to drugdiscovery similarity by kuhn on 2006-05-23 08:17:24 as
	Navigating chemical space for biology and medicine [My Copy] Nature, Vol. 432, No. 7019. (15 December 2004), pp. 855-861. by Christopher Lipinski, Andrew Hopkins posted to chemical similarity structure by kuhn on 2006-02-14 16:10:25 as along with 11 people and 5 groups TimRooney nicklynch sameersoi Effie LamBras BragilMassoud jxl marcius caporaso blackbart jerome_ucsf_slb NaCTeM EC biomedical-nlp BioinfoCIPF SGU-CIPF
	Enzyme function less conserved than anticipated. [My Copy] J Mol Biol, Vol. 318, No. 2. (26 April 2002), pp. 595-608. by B. Rost posted to enzyme function similarity by kuhn on 2006-02-06 15:27:28 as along with 4 people sgoetz JeremyZucker cjeans shung
	Classifying "kinase inhibitor-likeness" by using machine-learning methods. [My Copy] Chembiochem, Vol. 6, No. 3. (March 2005), pp. 558-566. by H. Briem, J. Günther posted to drug kinase machine_learning similarity by kuhn on 2006-01-20 10:52:59 as along with 2 people ucbcjbm hans228klavier
	Compound library development guided by protein structure similarity clustering and natural product structure. [My Copy] Proc Natl Acad Sci U S A, Vol. 101, No. 48. (30 November 2004), pp. 16721-16726. by M. A. Koch, L. O. Wittenberg, S. Basu, et al.D. A. Jeyaraj, E. Gourzoulidou, K. Reinecke, A. Odermatt, H. Waldmann posted to design drug protein similarity by kuhn on 2006-01-20 08:36:18 as
	Design of compound libraries based on natural product scaffolds and protein structure similarity clustering (PSSC) [My Copy] Molecular BioSystems, Vol. 1, No. 1. (May 2005), pp. 36-45. by Rengarajan Balamurugan, Frank J. Dekker, Herbert Waldmann posted to design drug similarity by kuhn on 2006-01-20 08:20:06 as
	SIMAP: the similarity matrix of proteins. [My Copy] Nucleic Acids Res, Vol. 34, No. Database issue. (1 January 2006) by T. Rattei, R. Arnold, P. Tischler, D. Lindner, V. Stümpflen, H. W. Mewes posted to alignment database nar2006 protein similarity by kuhn on 2006-01-02 20:23:54 as along with 4 people flbarroso natstreet druvus incovoma
	Anatomy of fingerprint search calculations on structurally diverse sets of active compounds. [My Copy] J Chem Inf Model, Vol. 45, No. 6. (c 2005), pp. 1812-1819. by J. W. Godden, F. L. Stahura, J. Bajorath posted to chemical p similarity structure by kuhn on 2005-12-20 12:18:47 as
	Comparison of 2D similarity and 3D superposition. Application to searching a conformational drug database. [My Copy] J Chem Inf Comput Sci, Vol. 44, No. 5. (t 2004), pp. 1816-1822. by M. Thimm, A. Goede, S. Hougardy, R. Preissner posted to chemical database drug similarity structure by kuhn on 2005-12-19 14:59:42 as
	SuperLigands - a database of ligand structures derived from the Protein Data Bank. [My Copy] BMC bioinformatics [electronic resource]. , Vol. 6, No. 1. (19 May 2005) by E. Michalsky, M. Dunkel, A. Goede, R. Preissner posted to chemical database pdb similarity by kuhn on 2005-12-19 14:38:44 as along with 3 people flbarroso mijam ucbcjbm
	Similarity metrics for ligands reflecting the similarity of the target proteins. [My Copy] J Chem Inf Comput Sci, Vol. 43, No. 2. (r 2003), pp. 391-405. by A. Schuffenhauer, P. Floersheim, P. Acklin, E. Jacoby posted to chemical drug interaction protein similarity by kuhn on 2005-12-08 10:42:07 as along with 1 person snuppepuppan

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drug	59
chemical	54
protein	41
database	33
structure	30
interaction	30
similarity	27
review	26
drugdiscovery	26
networks	25
evolution	22
metabolites	21
p	18
enzyme	17
bioinformatics	17
pathways	16
function	14
side_effects	14
activity_profile	12
genes	11
prediction	10
kinase	10
cancer	10
textmining	9
systemsbiology	8
nar2006	8
clustering	7
promiscuity	6
bioassay	5
design	5
ecoli	5
tool	5
phenotype	4
statistics	4
machine_learning	4
pharmacology	4
error	4
genomics	4
clinical_trials	3
history	3
screening	3
ontology	3
gpcr	3
pdb	3
genetics	3
biospectra	3
biomedicine	3
microarray	2
y2h	2
docking	2
human	2
alignment	2
ruleof5	2
bias	1
disease	1
sampling	1
sirna	1
visualization	1
natural_products	1
reactions	1
natural_molecule	1
proteomics	1
oxygen	1
mesh	1

kuhn's similarity [27 articles] Export

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